diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
index 122ee058..a1ac938a 100644
Binary files a/.doctrees/environment.pickle and b/.doctrees/environment.pickle differ
diff --git a/.doctrees/nbsphinx/tutorial/capsul_tutorial.ipynb b/.doctrees/nbsphinx/tutorial/capsul_tutorial.ipynb
index bae5a414..231a3482 100644
--- a/.doctrees/nbsphinx/tutorial/capsul_tutorial.ipynb
+++ b/.doctrees/nbsphinx/tutorial/capsul_tutorial.ipynb
@@ -53,10 +53,10 @@
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@@ -82,10 +82,10 @@
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@@ -124,10 +124,10 @@
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@@ -185,10 +185,10 @@
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@@ -226,10 +226,10 @@
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@@ -517,10 +517,10 @@
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@@ -545,10 +545,10 @@
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@@ -579,10 +579,10 @@
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@@ -621,10 +621,10 @@
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@@ -766,10 +766,10 @@
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@@ -813,10 +813,10 @@
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@@ -841,10 +841,10 @@
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@@ -875,10 +875,10 @@
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@@ -899,10 +899,10 @@
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@@ -936,10 +936,10 @@
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@@ -1083,10 +1083,10 @@
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@@ -1157,10 +1157,10 @@
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@@ -1200,10 +1200,10 @@
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@@ -1240,10 +1240,10 @@
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@@ -1291,10 +1291,10 @@
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-     "shell.execute_reply": "2024-04-02T08:26:28.938655Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.446926Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.446707Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.474828Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.474197Z"
     }
    },
    "outputs": [
@@ -1332,10 +1332,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.942011Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.941671Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.947705Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.947126Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.477389Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.477018Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.482881Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.482244Z"
     }
    },
    "outputs": [],
@@ -1377,10 +1377,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.950131Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.949672Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.956326Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.955699Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.485465Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.484950Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.491691Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.491014Z"
     }
    },
    "outputs": [],
@@ -1413,10 +1413,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.959001Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.958499Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.965209Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.964688Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.493981Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.493785Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.500159Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.499614Z"
     }
    },
    "outputs": [
@@ -1449,10 +1449,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.967376Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.967180Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.970424Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.969800Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.502313Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.502113Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.505369Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.504807Z"
     }
    },
    "outputs": [],
@@ -1480,10 +1480,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.972758Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.972421Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.976359Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.975732Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.507652Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.507454Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.511433Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.510863Z"
     }
    },
    "outputs": [],
@@ -1507,10 +1507,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.978659Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.978303Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.986053Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.985409Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.513579Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.513385Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.521236Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.520701Z"
     }
    },
    "outputs": [],
@@ -1543,10 +1543,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.988534Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.988186Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.994586Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.994079Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.523437Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.523244Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.529124Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.528581Z"
     }
    },
    "outputs": [
@@ -1574,10 +1574,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.996743Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.996549Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.999349Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.998845Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.531522Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.531148Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.534080Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.533556Z"
     }
    },
    "outputs": [],
@@ -1594,10 +1594,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.001687Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.001323Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.004451Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.003896Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.536377Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.536006Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.539343Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.538659Z"
     }
    },
    "outputs": [],
@@ -1613,10 +1613,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.006764Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.006364Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.009652Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.009092Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.541789Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.541412Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.544577Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.544002Z"
     }
    },
    "outputs": [],
@@ -1647,10 +1647,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.012008Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.011633Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.016606Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.016048Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.546951Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.546553Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.551599Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.550987Z"
     }
    },
    "outputs": [
@@ -1676,10 +1676,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.018929Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.018522Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.021841Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.021223Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.553980Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.553606Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.556830Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.556306Z"
     }
    },
    "outputs": [],
@@ -1732,10 +1732,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.024235Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.024039Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.077798Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.077159Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.559239Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.558816Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.610420Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.609798Z"
     }
    },
    "outputs": [
@@ -1767,7 +1767,7 @@
       "somaworkflow_config_file :   <undefined>\n",
       "somaworkflow_keep_failed_workflows :   True\n",
       "somaworkflow_keep_succeeded_workflows :   False\n",
-      "somaworkflow_computing_resources_config :   <soma.controller.controller.OpenKeyController object at 0x7fe5308b5720>\n",
+      "somaworkflow_computing_resources_config :   <soma.controller.controller.OpenKeyController object at 0x7f79640988b0>\n",
       "spm_directory :   <undefined>\n",
       "spm_standalone :   <undefined>\n",
       "spm_version :   <undefined>\n",
@@ -1823,10 +1823,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.080801Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.080251Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.103647Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.102967Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.613189Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.612668Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.634794Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.634230Z"
     }
    },
    "outputs": [
@@ -1896,10 +1896,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.106161Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.105955Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.118394Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.117726Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.637088Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.636885Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.649159Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.648510Z"
     }
    },
    "outputs": [
@@ -1947,10 +1947,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.121253Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.120842Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.127886Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.127241Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.651672Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.651462Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.658370Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.657835Z"
     }
    },
    "outputs": [],
@@ -1996,10 +1996,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.130402Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.129946Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.145439Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.144837Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.660736Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.660396Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.675710Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.675151Z"
     }
    },
    "outputs": [
@@ -2007,8 +2007,8 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "jobs: [<soma_workflow.client_types.Job object at 0x7fe530b9ed00>, <soma_workflow.client_types.Job object at 0x7fe530b9ed90>]\n",
-      "dependencies: {(<soma_workflow.client_types.Job object at 0x7fe530b9ed90>, <soma_workflow.client_types.Job object at 0x7fe530b9ed00>)}\n"
+      "jobs: [<soma_workflow.client_types.Job object at 0x7f7950c4e2b0>, <soma_workflow.client_types.Job object at 0x7f7950c4e370>]\n",
+      "dependencies: {(<soma_workflow.client_types.Job object at 0x7f7950c4e370>, <soma_workflow.client_types.Job object at 0x7f7950c4e2b0>)}\n"
      ]
     }
    ],
@@ -2039,10 +2039,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.148109Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.147737Z",
-     "iopub.status.idle": "2024-04-02T08:26:32.210048Z",
-     "shell.execute_reply": "2024-04-02T08:26:32.209374Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.677905Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.677698Z",
+     "iopub.status.idle": "2024-04-11T14:17:37.803426Z",
+     "shell.execute_reply": "2024-04-11T14:17:37.802699Z"
     }
    },
    "outputs": [
@@ -2110,10 +2110,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:32.212829Z",
-     "iopub.status.busy": "2024-04-02T08:26:32.212452Z",
-     "iopub.status.idle": "2024-04-02T08:26:32.215487Z",
-     "shell.execute_reply": "2024-04-02T08:26:32.214973Z"
+     "iopub.execute_input": "2024-04-11T14:17:37.805999Z",
+     "iopub.status.busy": "2024-04-11T14:17:37.805833Z",
+     "iopub.status.idle": "2024-04-11T14:17:37.809246Z",
+     "shell.execute_reply": "2024-04-11T14:17:37.808734Z"
     }
    },
    "outputs": [],
@@ -2141,10 +2141,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:32.217724Z",
-     "iopub.status.busy": "2024-04-02T08:26:32.217413Z",
-     "iopub.status.idle": "2024-04-02T08:26:35.273919Z",
-     "shell.execute_reply": "2024-04-02T08:26:35.273277Z"
+     "iopub.execute_input": "2024-04-11T14:17:37.811432Z",
+     "iopub.status.busy": "2024-04-11T14:17:37.811285Z",
+     "iopub.status.idle": "2024-04-11T14:17:40.863575Z",
+     "shell.execute_reply": "2024-04-11T14:17:40.862775Z"
     }
    },
    "outputs": [
@@ -2182,10 +2182,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:35.277140Z",
-     "iopub.status.busy": "2024-04-02T08:26:35.276768Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.506888Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.506225Z"
+     "iopub.execute_input": "2024-04-11T14:17:40.866567Z",
+     "iopub.status.busy": "2024-04-11T14:17:40.866385Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.130646Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.129982Z"
     }
    },
    "outputs": [
@@ -2249,10 +2249,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.509567Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.509391Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.513258Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.512631Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.133531Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.133140Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.136972Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.136327Z"
     }
    },
    "outputs": [
@@ -2288,10 +2288,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.515459Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.515311Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.550751Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.550177Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.139687Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.139204Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.174220Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.173685Z"
     }
    },
    "outputs": [],
@@ -2336,10 +2336,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.553592Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.553388Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.590940Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.590290Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.177074Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.176764Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.212853Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.212186Z"
     }
    },
    "outputs": [
@@ -2422,10 +2422,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.593480Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.593320Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.626599Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.625953Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.215622Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.215155Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.247191Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.246613Z"
     }
    },
    "outputs": [
@@ -2473,10 +2473,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.629148Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.628984Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.632286Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.631763Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.249879Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.249467Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.252572Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.252048Z"
     }
    },
    "outputs": [],
@@ -2506,10 +2506,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.634720Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.634389Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.651036Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.650365Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.255145Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.254742Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.270925Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.270304Z"
     }
    },
    "outputs": [],
@@ -2584,10 +2584,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.653874Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.653514Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.657323Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.656734Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.273489Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.273054Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.276560Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.276068Z"
     }
    },
    "outputs": [],
@@ -2622,10 +2622,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.659919Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.659569Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.664945Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.664444Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.278921Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.278572Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.283757Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.283143Z"
     }
    },
    "outputs": [
@@ -2703,10 +2703,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.667395Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.667054Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.802238Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.801545Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.286142Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.285751Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.424375Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.423719Z"
     }
    },
    "outputs": [
@@ -2797,10 +2797,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.804975Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.804806Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.817671Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.817092Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.427228Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.426871Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.440124Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.439620Z"
     }
    },
    "outputs": [
@@ -2845,10 +2845,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.820390Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.819974Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.823303Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.822802Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.442570Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.442243Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.445577Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.444915Z"
     }
    },
    "outputs": [],
diff --git a/.doctrees/tutorial/capsul_tutorial.doctree b/.doctrees/tutorial/capsul_tutorial.doctree
index aa8e9091..7727e3bb 100644
Binary files a/.doctrees/tutorial/capsul_tutorial.doctree and b/.doctrees/tutorial/capsul_tutorial.doctree differ
diff --git a/_modules/capsul/process/runprocess.html b/_modules/capsul/process/runprocess.html
index 81cd6a62..9d1a66dd 100644
--- a/_modules/capsul/process/runprocess.html
+++ b/_modules/capsul/process/runprocess.html
@@ -431,6 +431,20 @@ <h1>Source code for capsul.process.runprocess</h1><div class="highlight"><pre>
                       <span class="s1">&#39;studyconfig file). If not specified neither on the &#39;</span>
                       <span class="s1">&#39;commandline nor study configfile, taken as the same as &#39;</span>
                       <span class="s1">&#39;input.&#39;</span><span class="p">)</span>
+    <span class="n">group1</span><span class="o">.</span><span class="n">add_option</span><span class="p">(</span><span class="s1">&#39;--params&#39;</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s1">&#39;paramsfile&#39;</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
+                      <span class="n">help</span><span class="o">=</span><span class="s1">&#39;specify a file containing commandline parameters. &#39;</span>
+                      <span class="s1">&#39;The file will contain arguments for this commandline &#39;</span>
+                      <span class="s1">&#39;(argv): it is an alternative to providing them here. &#39;</span>
+                      <span class="s1">&#39;It can be useful to reuse parameters, or when the &#39;</span>
+                      <span class="s1">&#39;parameters are too long (in a large iteration, &#39;</span>
+                      <span class="s1">&#39;typically). The file syntax is one line per parameter, &#39;</span>
+                      <span class="s1">&#39;with no further parsing. It will be processed after &#39;</span>
+                      <span class="s1">&#39;all the current commanline arguments, not right now as &#39;</span>
+                      <span class="s1">&#39;the argument appears. But if a parameter has already &#39;</span>
+                      <span class="s1">&#39;been set (via commandline), it will not be replaced: &#39;</span>
+                      <span class="s1">&#39;first set arguments have priority. If the params file &#39;</span>
+                      <span class="s1">&#39;itself contains a --params parameter, then another &#39;</span>
+                      <span class="s1">&#39;file will be read afterwards, and so on.&#39;</span><span class="p">)</span>
     <span class="n">parser</span><span class="o">.</span><span class="n">add_option_group</span><span class="p">(</span><span class="n">group1</span><span class="p">)</span>
 
     <span class="n">group2</span> <span class="o">=</span> <span class="n">OptionGroup</span><span class="p">(</span><span class="n">parser</span><span class="p">,</span> <span class="s1">&#39;Processing&#39;</span><span class="p">,</span>
@@ -515,6 +529,17 @@ <h1>Source code for capsul.process.runprocess</h1><div class="highlight"><pre>
     <span class="n">parser</span><span class="o">.</span><span class="n">disable_interspersed_args</span><span class="p">()</span>
     <span class="p">(</span><span class="n">options</span><span class="p">,</span> <span class="n">args</span><span class="p">)</span> <span class="o">=</span> <span class="n">parser</span><span class="o">.</span><span class="n">parse_args</span><span class="p">()</span>
 
+    <span class="k">while</span> <span class="n">options</span><span class="o">.</span><span class="n">paramsfile</span><span class="p">:</span>
+        <span class="n">pfile</span> <span class="o">=</span> <span class="n">options</span><span class="o">.</span><span class="n">paramsfile</span>
+        <span class="n">options</span><span class="o">.</span><span class="n">paramsfile</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">pfile</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
+            <span class="n">new_argv</span> <span class="o">=</span> <span class="p">[</span><span class="n">l</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span> <span class="k">for</span> <span class="n">l</span> <span class="ow">in</span> <span class="n">f</span><span class="o">.</span><span class="n">readlines</span><span class="p">()]</span>
+        <span class="n">new_options</span><span class="p">,</span> <span class="n">new_args</span> <span class="o">=</span> <span class="n">parser</span><span class="o">.</span><span class="n">parse_args</span><span class="p">(</span><span class="n">new_argv</span><span class="p">)</span>
+        <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">new_options</span><span class="o">.</span><span class="vm">__dict__</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
+            <span class="k">if</span> <span class="ow">not</span> <span class="nb">getattr</span><span class="p">(</span><span class="n">options</span><span class="p">,</span> <span class="n">k</span><span class="p">,</span> <span class="kc">None</span><span class="p">):</span>
+                <span class="nb">setattr</span><span class="p">(</span><span class="n">options</span><span class="p">,</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span><span class="p">)</span>
+        <span class="n">args</span> <span class="o">+=</span> <span class="n">new_args</span>
+
     <span class="k">if</span> <span class="n">options</span><span class="o">.</span><span class="n">config</span><span class="p">:</span>
         <span class="n">engine</span> <span class="o">=</span> <span class="n">capsul_engine</span><span class="p">()</span>
         <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">options</span><span class="o">.</span><span class="n">config</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
diff --git a/searchindex.js b/searchindex.js
index aa76291d..db3a3fe5 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["api/api", "api/attributes", "api/engine", "api/in_context", "api/index", "api/info", "api/pipeline", "api/plugins", "api/process", "api/qt_apps", "api/qt_gui", "api/sphinxext", "api/study_config", "api/subprocess", "api/utils", "documentation", "index", "installation", "status", "tutorial/capsul_tutorial", "user_guide_tree/advanced_usage", "user_guide_tree/index", "user_guide_tree/xml_spec"], "filenames": ["api/api.rst", "api/attributes.rst", "api/engine.rst", "api/in_context.rst", "api/index.rst", "api/info.rst", "api/pipeline.rst", "api/plugins.rst", "api/process.rst", "api/qt_apps.rst", "api/qt_gui.rst", "api/sphinxext.rst", "api/study_config.rst", "api/subprocess.rst", "api/utils.rst", "documentation.rst", "index.rst", "installation.rst", "status.rst", "tutorial/capsul_tutorial.ipynb", "user_guide_tree/advanced_usage.rst", "user_guide_tree/index.rst", "user_guide_tree/xml_spec.rst"], "titles": ["capsul.api module", "capsul.attributes module", "capsul.engine module", "capsul.in_context module", "CAPSUL programming API documentation", "&lt;no title&gt;", "capsul.pipeline module", "capsul.plugins module", "capsul.process", "capsul.qt_apps module", "capsul.qt_gui module", "capsul.sphinxext module", "capsul.study_config module", "capsul.subprocess module", "capsul.utils module", "Documentation of the CAPSUL tools", "CAPSUL", "CAPSUL installation", "CAPSUL status", "CAPSUL: chain algorithms in pipelines", "Parameters completion", "User Guide", "XML 2.0 specification"], "terms": {"The": [0, 1, 2, 3, 4, 6, 8, 9, 10, 11, 12, 13, 15, 16, 19, 20, 21], "high": 0, "level": [0, 1, 2, 6, 9, 10, 12, 19, 21, 22], "pre": 0, "import": [0, 1, 2, 3, 6, 8, 11, 12, 19, 20, 21, 22], "main": [0, 3, 6, 10, 11, 12, 15, 21], "object": [0, 1, 2, 3, 6, 8, 10, 12, 19, 22], "from": [0, 1, 2, 3, 6, 8, 9, 10, 11, 12, 13, 16, 17, 19, 21, 22], "sever": [0, 2, 6, 8, 19, 20, 21, 22], "sub": [0, 1, 6, 9, 10, 11, 19, 22], "process": [0, 1, 2, 3, 6, 9, 10, 11, 12, 14, 18], "nipypeprocess": [0, 4], "processresult": [0, 4, 12], "filecopyprocess": [0, 4], "interactiveprocess": [0, 4], "pipelin": [0, 1, 2, 8, 9, 10, 11, 12, 16, 17, 18, 20], "plug": [0, 8, 22], "node": [0, 1, 2, 8, 10, 12, 16, 18, 19, 20, 21], "processnod": [0, 4], "pipelinenod": [0, 4], "switch": [0, 1, 4, 10, 18], "optionaloutputswitch": [0, 4], "studyconfig": [0, 1, 2, 4, 6, 8, 13, 18, 19, 20, 21], "capsul_engin": [0, 3, 4, 8, 12], "get_process_inst": [0, 1, 2, 4, 8, 19, 20, 22], "find_process": [0, 22], "soma": [1, 2, 4, 6, 8, 12, 13, 16, 18, 19, 20, 21], "factori": [1, 2, 4, 8, 10, 12, 20], "classfactori": [1, 4], "control": [1, 2, 4, 6, 8, 9, 10, 12, 19, 21], "trait": [1, 2, 4, 6, 8, 10, 11, 12, 17, 19, 22], "has_trait": [1, 2, 4, 6, 8, 12], "hastrait": [1, 2, 4, 6, 8, 12], "ctrait": [1, 2, 4, 6, 8, 12], "chastrait": [1, 2, 4, 6, 8, 12], "contain": [1, 2, 6, 8, 9, 10, 11, 12, 20, 21, 22], "infrastructur": [1, 6, 8, 10], "util": [1, 4, 6, 8, 10, 12, 20], "need": [1, 2, 6, 8, 10, 12, 19, 22], "defin": [1, 2, 6, 8, 10, 11, 12, 19, 21, 22], "us": [1, 2, 3, 4, 6, 8, 9, 10, 11, 12, 13, 16, 17, 21, 22], "complet": [1, 2, 6, 8, 10, 12, 15, 16, 18, 19, 21, 22], "system": [1, 2, 4, 6, 8, 10, 12, 16, 19, 21], "class_typ": 1, "sourc": [1, 2, 3, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 19, 22], "hold": [1, 2, 6, 19], "an": [1, 2, 3, 6, 8, 10, 11, 12, 13, 14, 16, 19, 20, 21], "schema": [1, 2, 11, 20], "A": [1, 2, 6, 8, 10, 11, 12, 16, 19, 22], "attrinbut": 1, "within": [1, 2, 6, 10, 11], "framework": [1, 12], "ha": [1, 2, 6, 8, 10, 12, 14, 16, 17, 19, 21, 22], "name": [1, 2, 3, 6, 8, 9, 10, 11, 12, 13, 14, 17, 19, 20, 21, 22], "which": [1, 2, 4, 6, 8, 10, 11, 12, 13, 16, 19, 20, 22], "i": [1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 13, 14, 16, 17, 19, 20, 21, 22], "identifi": [1, 2, 6, 8, 12, 22], "specifi": [1, 2, 6, 8, 10, 12, 19, 20, 21, 22], "arg": [1, 6, 8, 10, 12], "kwarg": [1, 2, 3, 6, 8, 10, 12, 13], "set": [1, 6, 8, 9, 10, 11, 12, 13, 16, 19, 21], "group": [1, 6, 20, 22], "paramet": [1, 2, 4, 6, 8, 9, 10, 11, 12, 13, 14, 16, 18, 21], "ar": [1, 2, 3, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 19, 20, 22], "initila": [1, 10, 12], "dure": [1, 2, 6, 8, 12, 17], "initi": [1, 2, 6, 8, 9, 10, 11, 12, 19], "creat": [1, 2, 3, 6, 8, 10, 11, 12, 13, 20, 22], "_user_trait": [1, 12], "all": [1, 2, 6, 8, 9, 10, 11, 12, 15, 16, 19, 21, 22], "instanc": [1, 2, 3, 6, 8, 10, 11, 12, 13, 16, 19, 20, 21, 22], "user": [1, 2, 4, 6, 8, 9, 10, 12, 15, 16, 22], "e": [1, 2, 3, 6, 10, 11, 12, 13, 19, 22], "automat": [1, 2, 6, 8, 10, 11, 12, 13, 16, 19, 20, 21, 22], "we": [1, 2, 6, 8, 9, 10, 11, 12, 17], "can": [1, 2, 6, 8, 9, 10, 11, 12, 13, 16, 17, 19, 20, 21, 22], "access": [1, 2, 6, 8, 10, 12, 19, 21], "thi": [1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 13, 14, 17, 19, 20, 21, 22], "user_trait": [1, 12, 19, 20], "method": [1, 2, 6, 8, 9, 10, 11, 12, 19, 20, 22], "If": [1, 2, 6, 8, 10, 12, 13, 14, 19, 21, 22], "directli": [1, 2, 6, 8, 12, 16, 19, 22], "deriv": [1, 6, 10, 12, 19], "procedur": 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"CrossValidationFoldNode": [[6, "crossvalidationfoldnode"]], "capsul.pipeline.custom_nodes.loo_node": [[6, "module-capsul.pipeline.custom_nodes.loo_node"]], "LeaveOneOutNode": [[6, "leaveoneoutnode"]], "capsul.pipeline.custom_nodes.map_node": [[6, "module-capsul.pipeline.custom_nodes.map_node"]], "MapNode": [[6, "mapnode"]], "capsul.pipeline.custom_nodes.reduce_node": [[6, "module-capsul.pipeline.custom_nodes.reduce_node"]], "ReduceNode": [[6, "reducenode"]], "capsul.plugins module": [[7, "capsul-plugins-module"]], "capsul.process": [[8, "capsul-process"]], "capsul.process.process submodule": [[8, "module-capsul.process.process"]], "Process": [[8, "process"]], "FileCopyProcess": [[8, "filecopyprocess"]], "InteractiveProcess": [[8, "interactiveprocess"]], "NipypeProcess": [[8, "nipypeprocess"]], "ProcessMeta": [[8, "processmeta"]], "ProcessResult": [[8, "processresult"]], "capsul.process.nipype_process submodule": [[8, "module-capsul.process.nipype_process"]], "nipype_factory()": [[8, 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"capsul-qt-apps-pipeline-viewer-app-submodule"]], "capsul.qt_apps.utils submodule": [[9, "module-capsul.qt_apps.utils"]], "capsul.qt_apps.utils.application submodule": [[9, "module-capsul.qt_apps.utils.application"]], "Application": [[9, "application"]], "EmittingStream": [[9, "emittingstream"]], "capsul.qt_apps.utils.fill_treectrl submodule": [[9, "module-capsul.qt_apps.utils.fill_treectrl"]], "fill_treectrl()": [[9, "fill-treectrl"]], "add_tree_nodes()": [[9, "add-tree-nodes"]], "search_in_menu()": [[9, "search-in-menu"]], "capsul.qt_apps.utils.find_pipelines submodule": [[9, "module-capsul.qt_apps.utils.find_pipelines"]], "find_pipelines_from_description()": [[9, "find-pipelines-from-description"]], "find_pipeline_and_process()": [[9, "find-pipeline-and-process"]], "lists2dict()": [[9, "lists2dict"]], "capsul.qt_apps.utils.window submodule": [[9, "module-capsul.qt_apps.utils.window"]], "MyQUiLoader": [[9, "myquiloader"]], "capsul.qt_gui module": [[10, "capsul-qt-gui-module"]], "capsul.qt_gui.board_widget submodule": [[10, "module-capsul.qt_gui.board_widget"]], "BoardWidget": [[10, "boardwidget"]], "capsul.qt_gui.widgets.activation_inspector submodule": [[10, "module-capsul.qt_gui.widgets.activation_inspector"]], "ActivationInspectorApp": [[10, "activationinspectorapp"]], "ActivationInspector": [[10, "activationinspector"]], "capsul.qt_gui.widgets.attributed_process_widget submodule": [[10, "module-capsul.qt_gui.widgets.attributed_process_widget"]], "AttributedProcessWidget": [[10, "attributedprocesswidget"]], "capsul.qt_gui.widgets.links_debugger submodule": [[10, "module-capsul.qt_gui.widgets.links_debugger"]], "CapsulLinkDebuggerView": [[10, "capsullinkdebuggerview"]], "capsul.qt_gui.widgets.pipeline_developer_view submodule": [[10, "module-capsul.qt_gui.widgets.pipeline_developer_view"]], "ColorType": [[10, "colortype"]], "EmbeddedSubPipelineItem": [[10, "embeddedsubpipelineitem"]], "boxItem": [[10, "boxitem"]], "NodeGWidget": [[10, "nodegwidget"]], 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"StudyConfigModule": [[12, "studyconfigmodule"]], "default_study_config()": [[12, "default-study-config"]], "capsul.study_config.config_modules submodule": [[12, "capsul-study-config-config-modules-submodule"]], "capsul.study_config.config_modules.attributes_config submodule": [[12, "capsul-study-config-config-modules-attributes-config-submodule"]], "AttributesConfig": [[12, "attributesconfig"]], "capsul.study_config.config_modules.brainvisa_config submodule": [[12, "module-capsul.study_config.config_modules.brainvisa_config"]], "BrainVISAConfig": [[12, "brainvisaconfig"]], "capsul.study_config.config_modules.fom_config submodule": [[12, "module-capsul.study_config.config_modules.fom_config"]], "capsul.study_config.config_modules.freesurfer_config submodule": [[12, "module-capsul.study_config.config_modules.freesurfer_config"]], "FreeSurferConfig": [[12, "freesurferconfig"]], "capsul.study_config.config_modules.fsl_config submodule": [[12, "module-capsul.study_config.config_modules.fsl_config"]], "FSLConfig": [[12, "fslconfig"]], "capsul.study_config.config_modules.matlab_config submodule": [[12, "module-capsul.study_config.config_modules.matlab_config"]], "MatlabConfig": [[12, "matlabconfig"]], "capsul.study_config.config_modules.nipype_config submodule": [[12, "module-capsul.study_config.config_modules.nipype_config"]], "NipypeConfig": [[12, "nipypeconfig"]], "capsul.study_config.config_modules.smartcaching_config submodule": [[12, "module-capsul.study_config.config_modules.smartcaching_config"]], "SmartCachingConfig": [[12, "smartcachingconfig"]], "capsul.study_config.config_modules.somaworkflow_config submodule": [[12, "module-capsul.study_config.config_modules.somaworkflow_config"]], "ResourceController": [[12, "resourcecontroller"]], "SomaWorkflowConfig": [[12, "somaworkflowconfig"]], "capsul.study_config.config_modules.spm_config submodule": [[12, "module-capsul.study_config.config_modules.spm_config"]], "SPMConfig": [[12, "spmconfig"]], "capsul.subprocess module": [[13, "capsul-subprocess-module"]], "capsul.subprocess.fsl submodule": [[13, "module-capsul.subprocess.fsl"]], "Popen": [[13, "popen"], [13, "id2"]], "fsl_command_with_environment()": [[13, "fsl-command-with-environment"]], "check_fsl_configuration()": [[13, "check-fsl-configuration"]], "check_configuration_values()": [[13, "check-configuration-values"], [13, "id4"]], "auto_configuration()": [[13, "auto-configuration"], [13, "id5"]], "call()": [[13, "call"], [13, "id6"]], "check_call()": [[13, "check-call"], [13, "id7"]], "check_output()": [[13, "check-output"], [13, "id8"]], "capsul.subprocess.spm submodule": [[13, "module-capsul.subprocess.spm"]], "find_spm()": [[13, "find-spm"]], "check_spm_configuration()": [[13, "check-spm-configuration"]], "spm_command()": [[13, "spm-command"]], "capsul.utils module": [[14, "capsul-utils-module"]], "find_processes()": [[14, "find-processes"]], "get_tool_version()": [[14, "get-tool-version"]], "get_nipype_interfaces_versions()": [[14, "get-nipype-interfaces-versions"]], "Documentation of the CAPSUL tools": [[15, "documentation-of-the-capsul-tools"]], "CAPSUL": [[16, "capsul"]], "Main features": [[16, "main-features"]], "Technical features": [[16, "technical-features"]], "Documentation contents": [[16, "documentation-contents"]], "License": [[16, "license"]], "CAPSUL installation": [[17, "capsul-installation"]], "Installing with BrainVISA": [[17, "installing-with-brainvisa"]], "Installing without BrainVISA": [[17, "installing-without-brainvisa"]], "Prerequisite": [[17, "prerequisite"]], "Install system-wide": [[17, "install-system-wide"]], "Install user-wide": [[17, "install-user-wide"]], "Install with virtualenv": [[17, "install-with-virtualenv"]], "CAPSUL status": [[18, "capsul-status"]], "CAPSUL: chain algorithms in pipelines": [[19, "CAPSUL:-chain-algorithms-in-pipelines"]], "Entering parameters": [[19, "Entering-parameters"]], "Links and exportations": [[19, "Links-and-exportations"]], "Switches": [[19, "Switches"]], "Using the Python API": [[19, "Using-the-Python-API"]], "Iteration over a process or pipeline": [[19, "Iteration-over-a-process-or-pipeline"]], "FOM definition": [[19, "FOM-definition"]], "Now Cleanup the files we have created\u2026": [[19, "Now-Cleanup-the-files-we-have-created..."]], "Parameters completion": [[20, "parameters-completion"]], "Completion model": [[20, "completion-model"]], "Using completion": [[20, "using-completion"]], "Graphical interface": [[20, "graphical-interface"]], "Defining a custom completion system": [[20, "defining-a-custom-completion-system"]], "Path building from attributes": [[20, "path-building-from-attributes"]], "Declaring attributes sets": [[20, "declaring-attributes-sets"]], "Declaring process and parameters attributes": [[20, "declaring-process-and-parameters-attributes"]], "Putting things together": [[20, "putting-things-together"]], "File Organization Model (FOM)": [[20, "file-organization-model-fom"]], "Using FOMs": [[20, "using-foms"]], "Defining FOMs": [[20, "defining-foms"]], "Iterating processing over multiple data": [[20, "iterating-processing-over-multiple-data"]], "User Guide": [[21, "user-guide"]], "Tutorial": [[21, "tutorial"]], "Running Capsul": [[21, "running-capsul"]], "Running as commandline": [[21, "running-as-commandline"]], "XML Specifications": [[21, "xml-specifications"]], "Documenting CAPSUL processes and pipelines with Sphinx": [[21, "documenting-capsul-processes-and-pipelines-with-sphinx"]], "Advanced usage": [[21, "advanced-usage"]], "XML 2.0 specification": [[22, "xml-2-0-specification"]], "Table of content": [[22, "table-of-content"]], "Processes": [[22, "processes"]], "Parameter types": [[22, "parameter-types"]], "Process roles": [[22, "process-roles"]], "Association between a Python function and an XML string": [[22, "association-between-a-python-function-and-an-xml-string"]], "Processes examples": [[22, 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"capsul.engine.database_populse.PopulseDBEngine.set_json_value"]], "set_named_directory() (capsul.engine.database.databaseengine method)": [[2, "capsul.engine.database.DatabaseEngine.set_named_directory"]], "set_named_directory() (capsul.engine.database_json.jsondbengine method)": [[2, "capsul.engine.database_json.JSONDBEngine.set_named_directory"]], "set_named_directory() (capsul.engine.database_populse.populsedbengine method)": [[2, "capsul.engine.database_populse.PopulseDBEngine.set_named_directory"]], "set_path_metadata() (capsul.engine.database.databaseengine method)": [[2, "capsul.engine.database.DatabaseEngine.set_path_metadata"]], "set_path_metadata() (capsul.engine.database_json.jsondbengine method)": [[2, "capsul.engine.database_json.JSONDBEngine.set_path_metadata"]], "set_path_metadata() (capsul.engine.database_populse.populsedbengine method)": [[2, "capsul.engine.database_populse.PopulseDBEngine.set_path_metadata"]], "start() (capsul.engine.capsulengine method)": [[2, 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"fsl_check_call() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_check_call"]], "fsl_check_output() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_check_output"]], "fsl_command_with_environment() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_command_with_environment"]], "fsl_env() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_env"]], "spm_call() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_call"]], "spm_check_call() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_check_call"]], "spm_check_output() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_check_output"]], "capsul.info": [[5, "module-capsul.info"]], "constructedpipeline (class in capsul.pipeline.pipeline_construction)": [[6, "capsul.pipeline.pipeline_construction.ConstructedPipeline"]], "crossvalidationfoldnode (class in capsul.pipeline.custom_nodes.cv_node)": [[6, "capsul.pipeline.custom_nodes.cv_node.CrossValidationFoldNode"]], "graph (class in capsul.pipeline.topological_sort)": [[6, "capsul.pipeline.topological_sort.Graph"]], "graphnode (class in capsul.pipeline.topological_sort)": [[6, "capsul.pipeline.topological_sort.GraphNode"]], "leaveoneoutnode (class in capsul.pipeline.custom_nodes.loo_node)": [[6, "capsul.pipeline.custom_nodes.loo_node.LeaveOneOutNode"]], "mapnode (class in capsul.pipeline.custom_nodes.map_node)": [[6, "capsul.pipeline.custom_nodes.map_node.MapNode"]], "node (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.Node"]], "optionaloutputswitch (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.OptionalOutputSwitch"]], "pipeline (class in capsul.pipeline.pipeline)": [[6, "capsul.pipeline.pipeline.Pipeline"]], "pipelineconstructor (class in capsul.pipeline.pipeline_construction)": [[6, "capsul.pipeline.pipeline_construction.PipelineConstructor"]], "pipelinenode (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.PipelineNode"]], "plug (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.Plug"]], "processiteration (class in capsul.pipeline.process_iteration)": [[6, "capsul.pipeline.process_iteration.ProcessIteration"]], "processnode (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.ProcessNode"]], "reducenode (class in capsul.pipeline.custom_nodes.reduce_node)": [[6, "capsul.pipeline.custom_nodes.reduce_node.ReduceNode"]], "strcatnode (class in capsul.pipeline.custom_nodes.strcat_node)": [[6, "capsul.pipeline.custom_nodes.strcat_node.StrCatNode"]], "strconvnode (class in capsul.pipeline.custom_nodes.strconv)": [[6, "capsul.pipeline.custom_nodes.strconv.StrConvNode"]], "switch (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.Switch"]], "tempfile (class in capsul.pipeline.pipeline_workflow)": [[6, 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\ No newline at end of file
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"CrossValidationFoldNode": [[6, "crossvalidationfoldnode"]], "capsul.pipeline.custom_nodes.loo_node": [[6, "module-capsul.pipeline.custom_nodes.loo_node"]], "LeaveOneOutNode": [[6, "leaveoneoutnode"]], "capsul.pipeline.custom_nodes.map_node": [[6, "module-capsul.pipeline.custom_nodes.map_node"]], "MapNode": [[6, "mapnode"]], "capsul.pipeline.custom_nodes.reduce_node": [[6, "module-capsul.pipeline.custom_nodes.reduce_node"]], "ReduceNode": [[6, "reducenode"]], "capsul.plugins module": [[7, "capsul-plugins-module"]], "capsul.process": [[8, "capsul-process"]], "capsul.process.process submodule": [[8, "module-capsul.process.process"]], "Process": [[8, "process"]], "FileCopyProcess": [[8, "filecopyprocess"]], "InteractiveProcess": [[8, "interactiveprocess"]], "NipypeProcess": [[8, "nipypeprocess"]], "ProcessMeta": [[8, "processmeta"]], "ProcessResult": [[8, "processresult"]], "capsul.process.nipype_process submodule": [[8, "module-capsul.process.nipype_process"]], "nipype_factory()": [[8, 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"capsul-qt-apps-pipeline-viewer-app-submodule"]], "capsul.qt_apps.utils submodule": [[9, "module-capsul.qt_apps.utils"]], "capsul.qt_apps.utils.application submodule": [[9, "module-capsul.qt_apps.utils.application"]], "Application": [[9, "application"]], "EmittingStream": [[9, "emittingstream"]], "capsul.qt_apps.utils.fill_treectrl submodule": [[9, "module-capsul.qt_apps.utils.fill_treectrl"]], "fill_treectrl()": [[9, "fill-treectrl"]], "add_tree_nodes()": [[9, "add-tree-nodes"]], "search_in_menu()": [[9, "search-in-menu"]], "capsul.qt_apps.utils.find_pipelines submodule": [[9, "module-capsul.qt_apps.utils.find_pipelines"]], "find_pipelines_from_description()": [[9, "find-pipelines-from-description"]], "find_pipeline_and_process()": [[9, "find-pipeline-and-process"]], "lists2dict()": [[9, "lists2dict"]], "capsul.qt_apps.utils.window submodule": [[9, "module-capsul.qt_apps.utils.window"]], "MyQUiLoader": [[9, "myquiloader"]], "capsul.qt_gui module": [[10, "capsul-qt-gui-module"]], "capsul.qt_gui.board_widget submodule": [[10, "module-capsul.qt_gui.board_widget"]], "BoardWidget": [[10, "boardwidget"]], "capsul.qt_gui.widgets.activation_inspector submodule": [[10, "module-capsul.qt_gui.widgets.activation_inspector"]], "ActivationInspectorApp": [[10, "activationinspectorapp"]], "ActivationInspector": [[10, "activationinspector"]], "capsul.qt_gui.widgets.attributed_process_widget submodule": [[10, "module-capsul.qt_gui.widgets.attributed_process_widget"]], "AttributedProcessWidget": [[10, "attributedprocesswidget"]], "capsul.qt_gui.widgets.links_debugger submodule": [[10, "module-capsul.qt_gui.widgets.links_debugger"]], "CapsulLinkDebuggerView": [[10, "capsullinkdebuggerview"]], "capsul.qt_gui.widgets.pipeline_developer_view submodule": [[10, "module-capsul.qt_gui.widgets.pipeline_developer_view"]], "ColorType": [[10, "colortype"]], "EmbeddedSubPipelineItem": [[10, "embeddedsubpipelineitem"]], "boxItem": [[10, "boxitem"]], "NodeGWidget": [[10, "nodegwidget"]], 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"StudyConfigModule": [[12, "studyconfigmodule"]], "default_study_config()": [[12, "default-study-config"]], "capsul.study_config.config_modules submodule": [[12, "capsul-study-config-config-modules-submodule"]], "capsul.study_config.config_modules.attributes_config submodule": [[12, "capsul-study-config-config-modules-attributes-config-submodule"]], "AttributesConfig": [[12, "attributesconfig"]], "capsul.study_config.config_modules.brainvisa_config submodule": [[12, "module-capsul.study_config.config_modules.brainvisa_config"]], "BrainVISAConfig": [[12, "brainvisaconfig"]], "capsul.study_config.config_modules.fom_config submodule": [[12, "module-capsul.study_config.config_modules.fom_config"]], "capsul.study_config.config_modules.freesurfer_config submodule": [[12, "module-capsul.study_config.config_modules.freesurfer_config"]], "FreeSurferConfig": [[12, "freesurferconfig"]], "capsul.study_config.config_modules.fsl_config submodule": [[12, "module-capsul.study_config.config_modules.fsl_config"]], "FSLConfig": [[12, "fslconfig"]], "capsul.study_config.config_modules.matlab_config submodule": [[12, "module-capsul.study_config.config_modules.matlab_config"]], "MatlabConfig": [[12, "matlabconfig"]], "capsul.study_config.config_modules.nipype_config submodule": [[12, "module-capsul.study_config.config_modules.nipype_config"]], "NipypeConfig": [[12, "nipypeconfig"]], "capsul.study_config.config_modules.smartcaching_config submodule": [[12, "module-capsul.study_config.config_modules.smartcaching_config"]], "SmartCachingConfig": [[12, "smartcachingconfig"]], "capsul.study_config.config_modules.somaworkflow_config submodule": [[12, "module-capsul.study_config.config_modules.somaworkflow_config"]], "ResourceController": [[12, "resourcecontroller"]], "SomaWorkflowConfig": [[12, "somaworkflowconfig"]], "capsul.study_config.config_modules.spm_config submodule": [[12, "module-capsul.study_config.config_modules.spm_config"]], "SPMConfig": [[12, "spmconfig"]], "capsul.subprocess module": [[13, "capsul-subprocess-module"]], "capsul.subprocess.fsl submodule": [[13, "module-capsul.subprocess.fsl"]], "Popen": [[13, "popen"], [13, "id2"]], "fsl_command_with_environment()": [[13, "fsl-command-with-environment"]], "check_fsl_configuration()": [[13, "check-fsl-configuration"]], "check_configuration_values()": [[13, "check-configuration-values"], [13, "id4"]], "auto_configuration()": [[13, "auto-configuration"], [13, "id5"]], "call()": [[13, "call"], [13, "id6"]], "check_call()": [[13, "check-call"], [13, "id7"]], "check_output()": [[13, "check-output"], [13, "id8"]], "capsul.subprocess.spm submodule": [[13, "module-capsul.subprocess.spm"]], "find_spm()": [[13, "find-spm"]], "check_spm_configuration()": [[13, "check-spm-configuration"]], "spm_command()": [[13, "spm-command"]], "capsul.utils module": [[14, "capsul-utils-module"]], "find_processes()": [[14, "find-processes"]], "get_tool_version()": [[14, "get-tool-version"]], "get_nipype_interfaces_versions()": [[14, "get-nipype-interfaces-versions"]], "Documentation of the CAPSUL tools": [[15, "documentation-of-the-capsul-tools"]], "CAPSUL": [[16, "capsul"]], "Main features": [[16, "main-features"]], "Technical features": [[16, "technical-features"]], "Documentation contents": [[16, "documentation-contents"]], "License": [[16, "license"]], "CAPSUL installation": [[17, "capsul-installation"]], "Installing with BrainVISA": [[17, "installing-with-brainvisa"]], "Installing without BrainVISA": [[17, "installing-without-brainvisa"]], "Prerequisite": [[17, "prerequisite"]], "Install system-wide": [[17, "install-system-wide"]], "Install user-wide": [[17, "install-user-wide"]], "Install with virtualenv": [[17, "install-with-virtualenv"]], "CAPSUL status": [[18, "capsul-status"]], "CAPSUL: chain algorithms in pipelines": [[19, "CAPSUL:-chain-algorithms-in-pipelines"]], "Entering parameters": [[19, "Entering-parameters"]], "Links and exportations": [[19, "Links-and-exportations"]], "Switches": [[19, "Switches"]], "Using the Python API": [[19, "Using-the-Python-API"]], "Iteration over a process or pipeline": [[19, "Iteration-over-a-process-or-pipeline"]], "FOM definition": [[19, "FOM-definition"]], "Now Cleanup the files we have created\u2026": [[19, "Now-Cleanup-the-files-we-have-created..."]], "Parameters completion": [[20, "parameters-completion"]], "Completion model": [[20, "completion-model"]], "Using completion": [[20, "using-completion"]], "Graphical interface": [[20, "graphical-interface"]], "Defining a custom completion system": [[20, "defining-a-custom-completion-system"]], "Path building from attributes": [[20, "path-building-from-attributes"]], "Declaring attributes sets": [[20, "declaring-attributes-sets"]], "Declaring process and parameters attributes": [[20, "declaring-process-and-parameters-attributes"]], "Putting things together": [[20, "putting-things-together"]], "File Organization Model (FOM)": [[20, "file-organization-model-fom"]], "Using FOMs": [[20, "using-foms"]], "Defining FOMs": [[20, "defining-foms"]], "Iterating processing over multiple data": [[20, "iterating-processing-over-multiple-data"]], "User Guide": [[21, "user-guide"]], "Tutorial": [[21, "tutorial"]], "Running Capsul": [[21, "running-capsul"]], "Running as commandline": [[21, "running-as-commandline"]], "XML Specifications": [[21, "xml-specifications"]], "Documenting CAPSUL processes and pipelines with Sphinx": [[21, "documenting-capsul-processes-and-pipelines-with-sphinx"]], "Advanced usage": [[21, "advanced-usage"]], "XML 2.0 specification": [[22, "xml-2-0-specification"]], "Table of content": [[22, "table-of-content"]], "Processes": [[22, "processes"]], "Parameter types": [[22, "parameter-types"]], "Process roles": [[22, "process-roles"]], "Association between a Python function and an XML string": [[22, "association-between-a-python-function-and-an-xml-string"]], "Processes examples": [[22, 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"fsl_check_call() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_check_call"]], "fsl_check_output() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_check_output"]], "fsl_command_with_environment() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_command_with_environment"]], "fsl_env() (in module capsul.in_context.fsl)": [[3, "capsul.in_context.fsl.fsl_env"]], "spm_call() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_call"]], "spm_check_call() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_check_call"]], "spm_check_output() (in module capsul.in_context.spm)": [[3, "capsul.in_context.spm.spm_check_output"]], "capsul.info": [[5, "module-capsul.info"]], "constructedpipeline (class in capsul.pipeline.pipeline_construction)": [[6, "capsul.pipeline.pipeline_construction.ConstructedPipeline"]], "crossvalidationfoldnode (class in capsul.pipeline.custom_nodes.cv_node)": [[6, "capsul.pipeline.custom_nodes.cv_node.CrossValidationFoldNode"]], "graph (class in capsul.pipeline.topological_sort)": [[6, "capsul.pipeline.topological_sort.Graph"]], "graphnode (class in capsul.pipeline.topological_sort)": [[6, "capsul.pipeline.topological_sort.GraphNode"]], "leaveoneoutnode (class in capsul.pipeline.custom_nodes.loo_node)": [[6, "capsul.pipeline.custom_nodes.loo_node.LeaveOneOutNode"]], "mapnode (class in capsul.pipeline.custom_nodes.map_node)": [[6, "capsul.pipeline.custom_nodes.map_node.MapNode"]], "node (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.Node"]], "optionaloutputswitch (class in capsul.pipeline.pipeline_nodes)": [[6, "capsul.pipeline.pipeline_nodes.OptionalOutputSwitch"]], "pipeline (class in capsul.pipeline.pipeline)": [[6, "capsul.pipeline.pipeline.Pipeline"]], "pipelineconstructor (class in capsul.pipeline.pipeline_construction)": [[6, "capsul.pipeline.pipeline_construction.PipelineConstructor"]], "pipelinenode 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attribute)": [[12, "capsul.study_config.study_config.StudyConfig.input_directory"]], "is_pipeline_node() (in module capsul.study_config.process_instance)": [[12, "capsul.study_config.process_instance.is_pipeline_node"]], "is_process() (in module capsul.study_config.process_instance)": [[12, "capsul.study_config.process_instance.is_process"]], "load_module() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.load_module"]], "name (capsul.study_config.study_config.studyconfigmodule property)": [[12, "capsul.study_config.study_config.StudyConfigModule.name"]], "output_directory (capsul.study_config.study_config.studyconfig attribute)": [[12, "capsul.study_config.study_config.StudyConfig.output_directory"]], "path_translations (capsul.study_config.config_modules.somaworkflow_config.resourcecontroller attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.ResourceController.path_translations"]], "process_output_directory (capsul.study_config.study_config.studyconfig attribute)": [[12, "capsul.study_config.study_config.StudyConfig.process_output_directory"]], "queue (capsul.study_config.config_modules.somaworkflow_config.resourcecontroller attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.ResourceController.queue"]], "read_configuration() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.read_configuration"]], "reset_process_counter() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.reset_process_counter"], [12, "id9"]], "run() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.run"], [12, "id10"]], "run_process() (in module capsul.study_config.run)": [[12, "capsul.study_config.run.run_process"]], "save_configuration() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.save_configuration"]], "set_computing_resource_password() (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig method)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.set_computing_resource_password"], [12, "id27"]], "set_study_configuration() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.set_study_configuration"], [12, "id11"]], "set_trait_value() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.set_trait_value"], [12, "id12"]], "somaworkflow_computing_resource (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.somaworkflow_computing_resource"]], "somaworkflow_computing_resources_config (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.somaworkflow_computing_resources_config"]], "somaworkflow_config_file (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.somaworkflow_config_file"]], "somaworkflow_keep_failed_workflows (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.somaworkflow_keep_failed_workflows"]], "somaworkflow_keep_succeeded_workflows (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.somaworkflow_keep_succeeded_workflows"]], "transfer_paths (capsul.study_config.config_modules.somaworkflow_config.resourcecontroller attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.ResourceController.transfer_paths"]], "tuple_json_encoder() (in module capsul.study_config.memory)": [[12, "capsul.study_config.memory.tuple_json_encoder"]], "update_study_configuration() (capsul.study_config.study_config.studyconfig method)": [[12, "capsul.study_config.study_config.StudyConfig.update_study_configuration"], [12, "id13"]], "use_soma_workflow (capsul.study_config.config_modules.somaworkflow_config.somaworkflowconfig attribute)": [[12, "capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.use_soma_workflow"]], "popen (class in capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.Popen"]], "popen (class in capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.Popen"]], "auto_configuration() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.auto_configuration"]], "auto_configuration() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.auto_configuration"]], "call() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.call"]], "call() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.call"]], "capsul.subprocess": [[13, "module-capsul.subprocess"]], "capsul.subprocess.fsl": [[13, "module-capsul.subprocess.fsl"]], "capsul.subprocess.spm": [[13, "module-capsul.subprocess.spm"]], "check_call() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.check_call"]], "check_call() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.check_call"]], "check_configuration_values() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.check_configuration_values"]], "check_configuration_values() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.check_configuration_values"]], "check_fsl_configuration() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.check_fsl_configuration"]], "check_output() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.check_output"]], "check_output() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.check_output"]], "check_spm_configuration() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.check_spm_configuration"]], "find_spm() (in module capsul.subprocess.spm)": [[13, "capsul.subprocess.spm.find_spm"]], "fsl_command_with_environment() (in module capsul.subprocess.fsl)": [[13, "capsul.subprocess.fsl.fsl_command_with_environment"]], "capsul.utils": [[14, "module-capsul.utils"]], "capsul.utils.finder": [[14, "module-capsul.utils.finder"]], "capsul.utils.version_utils": [[14, "module-capsul.utils.version_utils"]], "find_processes() (in module capsul.utils.finder)": [[14, "capsul.utils.finder.find_processes"]], "get_nipype_interfaces_versions() (in module capsul.utils.version_utils)": [[14, "capsul.utils.version_utils.get_nipype_interfaces_versions"]], "get_tool_version() (in module capsul.utils.version_utils)": [[14, "capsul.utils.version_utils.get_tool_version"]]}})
\ No newline at end of file
diff --git a/tutorial/capsul_tutorial.html b/tutorial/capsul_tutorial.html
index 93c41535..65b545fb 100644
--- a/tutorial/capsul_tutorial.html
+++ b/tutorial/capsul_tutorial.html
@@ -1144,7 +1144,7 @@ <h1><p>StudyConfig</p>
 somaworkflow_config_file :   &lt;undefined&gt;
 somaworkflow_keep_failed_workflows :   True
 somaworkflow_keep_succeeded_workflows :   False
-somaworkflow_computing_resources_config :   &lt;soma.controller.controller.OpenKeyController object at 0x7fe5308b5720&gt;
+somaworkflow_computing_resources_config :   &lt;soma.controller.controller.OpenKeyController object at 0x7f79640988b0&gt;
 spm_directory :   &lt;undefined&gt;
 spm_standalone :   &lt;undefined&gt;
 spm_version :   &lt;undefined&gt;
@@ -1303,8 +1303,8 @@ <h1><p>Distributed execution using Soma-Workflow</p>
 </div>
 <div class="output_area docutils container">
 <div class="highlight"><pre>
-jobs: [&lt;soma_workflow.client_types.Job object at 0x7fe530b9ed00&gt;, &lt;soma_workflow.client_types.Job object at 0x7fe530b9ed90&gt;]
-dependencies: {(&lt;soma_workflow.client_types.Job object at 0x7fe530b9ed90&gt;, &lt;soma_workflow.client_types.Job object at 0x7fe530b9ed00&gt;)}
+jobs: [&lt;soma_workflow.client_types.Job object at 0x7f7950c4e2b0&gt;, &lt;soma_workflow.client_types.Job object at 0x7f7950c4e370&gt;]
+dependencies: {(&lt;soma_workflow.client_types.Job object at 0x7f7950c4e370&gt;, &lt;soma_workflow.client_types.Job object at 0x7f7950c4e2b0&gt;)}
 </pre></div></div>
 </div>
 <p>The workwlow can be saved and reloaded in soma_workflow_gui, or used in a soma-workflow controller:</p>
diff --git a/tutorial/capsul_tutorial.ipynb b/tutorial/capsul_tutorial.ipynb
index bae5a414..231a3482 100644
--- a/tutorial/capsul_tutorial.ipynb
+++ b/tutorial/capsul_tutorial.ipynb
@@ -53,10 +53,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.396802Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.396603Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.404629Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.403995Z"
+     "iopub.execute_input": "2024-04-11T14:17:33.931959Z",
+     "iopub.status.busy": "2024-04-11T14:17:33.931752Z",
+     "iopub.status.idle": "2024-04-11T14:17:33.939817Z",
+     "shell.execute_reply": "2024-04-11T14:17:33.939204Z"
     }
    },
    "outputs": [],
@@ -82,10 +82,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.407244Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.406738Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.411015Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.410367Z"
+     "iopub.execute_input": "2024-04-11T14:17:33.942200Z",
+     "iopub.status.busy": "2024-04-11T14:17:33.942003Z",
+     "iopub.status.idle": "2024-04-11T14:17:33.946227Z",
+     "shell.execute_reply": "2024-04-11T14:17:33.945620Z"
     }
    },
    "outputs": [
@@ -124,10 +124,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.448896Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.448458Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.693232Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.692623Z"
+     "iopub.execute_input": "2024-04-11T14:17:33.983489Z",
+     "iopub.status.busy": "2024-04-11T14:17:33.982861Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.227309Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.226706Z"
     }
    },
    "outputs": [
@@ -185,10 +185,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.695913Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.695466Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.699944Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.699403Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.229865Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.229616Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.233808Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.233315Z"
     }
    },
    "outputs": [],
@@ -226,10 +226,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.702496Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.702124Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.705617Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.705036Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.236342Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.235965Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.239382Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.238740Z"
     }
    },
    "outputs": [],
@@ -268,10 +268,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.708046Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.707671Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.711289Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.710606Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.241930Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.241513Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.245014Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.244451Z"
     }
    },
    "outputs": [],
@@ -299,10 +299,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.713592Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.713396Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.717911Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.717297Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.247539Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.247165Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.251724Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.251065Z"
     }
    },
    "outputs": [
@@ -340,10 +340,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.720214Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.720021Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.724434Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.723892Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.254196Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.253815Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.258279Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.257743Z"
     }
    },
    "outputs": [],
@@ -386,10 +386,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.726695Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.726476Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.733372Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.732753Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.260588Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.260386Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.267352Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.266773Z"
     }
    },
    "outputs": [],
@@ -425,10 +425,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.735801Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.735446Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.739821Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.739183Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.269623Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.269423Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.273807Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.273266Z"
     }
    },
    "outputs": [],
@@ -478,10 +478,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.742255Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.741875Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.745562Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.745026Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.276289Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.275932Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.279581Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.279050Z"
     }
    },
    "outputs": [],
@@ -517,10 +517,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.747939Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.747738Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.751371Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.750794Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.281803Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.281606Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.285315Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.284780Z"
     }
    },
    "outputs": [],
@@ -545,10 +545,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.753715Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.753357Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.759277Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.758714Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.287542Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.287344Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.293193Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.292561Z"
     }
    },
    "outputs": [],
@@ -579,10 +579,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.761674Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.761300Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.773651Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.772999Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.295690Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.295383Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.308718Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.307990Z"
     }
    },
    "outputs": [
@@ -621,10 +621,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.776386Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.775980Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.781098Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.780585Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.311531Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.311310Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.316731Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.316121Z"
     },
     "scrolled": false
    },
@@ -693,10 +693,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.783441Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.783075Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.805713Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.805150Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.319210Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.318857Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.342203Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.341678Z"
     }
    },
    "outputs": [
@@ -766,10 +766,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.808340Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.807961Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.811799Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.811205Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.344616Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.344413Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.348317Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.347805Z"
     }
    },
    "outputs": [],
@@ -813,10 +813,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.814197Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.813830Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.817637Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.817077Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.350644Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.350448Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.354298Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.353777Z"
     }
    },
    "outputs": [],
@@ -841,10 +841,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.820119Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.819747Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.827204Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.826615Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.356609Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.356413Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.363815Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.363285Z"
     }
    },
    "outputs": [],
@@ -875,10 +875,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.829645Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.829262Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.832729Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.832143Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.366223Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.365844Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.369418Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.368886Z"
     }
    },
    "outputs": [],
@@ -899,10 +899,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.835159Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.834784Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.846076Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.845331Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.371974Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.371516Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.382424Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.381704Z"
     }
    },
    "outputs": [
@@ -936,10 +936,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.848802Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.848400Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.852991Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.852431Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.385269Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.384892Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.389394Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.388775Z"
     }
    },
    "outputs": [
@@ -1083,10 +1083,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.855462Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.855085Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.886133Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.885561Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.391807Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.391468Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.422420Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.421858Z"
     }
    },
    "outputs": [
@@ -1157,10 +1157,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.888621Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.888246Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.892163Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.891592Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.425020Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.424572Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.428463Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.427951Z"
     }
    },
    "outputs": [],
@@ -1200,10 +1200,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.894623Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.894257Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.898608Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.898059Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.430922Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.430505Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.434951Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.434334Z"
     }
    },
    "outputs": [],
@@ -1240,10 +1240,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.901073Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.900645Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.908241Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.907636Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.437130Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.436933Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.444412Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.443783Z"
     }
    },
    "outputs": [],
@@ -1291,10 +1291,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.910936Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.910531Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.939362Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.938655Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.446926Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.446707Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.474828Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.474197Z"
     }
    },
    "outputs": [
@@ -1332,10 +1332,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.942011Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.941671Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.947705Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.947126Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.477389Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.477018Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.482881Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.482244Z"
     }
    },
    "outputs": [],
@@ -1377,10 +1377,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.950131Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.949672Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.956326Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.955699Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.485465Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.484950Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.491691Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.491014Z"
     }
    },
    "outputs": [],
@@ -1413,10 +1413,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.959001Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.958499Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.965209Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.964688Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.493981Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.493785Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.500159Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.499614Z"
     }
    },
    "outputs": [
@@ -1449,10 +1449,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.967376Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.967180Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.970424Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.969800Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.502313Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.502113Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.505369Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.504807Z"
     }
    },
    "outputs": [],
@@ -1480,10 +1480,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.972758Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.972421Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.976359Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.975732Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.507652Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.507454Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.511433Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.510863Z"
     }
    },
    "outputs": [],
@@ -1507,10 +1507,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.978659Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.978303Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.986053Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.985409Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.513579Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.513385Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.521236Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.520701Z"
     }
    },
    "outputs": [],
@@ -1543,10 +1543,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.988534Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.988186Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.994586Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.994079Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.523437Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.523244Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.529124Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.528581Z"
     }
    },
    "outputs": [
@@ -1574,10 +1574,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:28.996743Z",
-     "iopub.status.busy": "2024-04-02T08:26:28.996549Z",
-     "iopub.status.idle": "2024-04-02T08:26:28.999349Z",
-     "shell.execute_reply": "2024-04-02T08:26:28.998845Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.531522Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.531148Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.534080Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.533556Z"
     }
    },
    "outputs": [],
@@ -1594,10 +1594,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.001687Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.001323Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.004451Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.003896Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.536377Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.536006Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.539343Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.538659Z"
     }
    },
    "outputs": [],
@@ -1613,10 +1613,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.006764Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.006364Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.009652Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.009092Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.541789Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.541412Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.544577Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.544002Z"
     }
    },
    "outputs": [],
@@ -1647,10 +1647,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.012008Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.011633Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.016606Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.016048Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.546951Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.546553Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.551599Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.550987Z"
     }
    },
    "outputs": [
@@ -1676,10 +1676,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.018929Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.018522Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.021841Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.021223Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.553980Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.553606Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.556830Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.556306Z"
     }
    },
    "outputs": [],
@@ -1732,10 +1732,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.024235Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.024039Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.077798Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.077159Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.559239Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.558816Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.610420Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.609798Z"
     }
    },
    "outputs": [
@@ -1767,7 +1767,7 @@
       "somaworkflow_config_file :   <undefined>\n",
       "somaworkflow_keep_failed_workflows :   True\n",
       "somaworkflow_keep_succeeded_workflows :   False\n",
-      "somaworkflow_computing_resources_config :   <soma.controller.controller.OpenKeyController object at 0x7fe5308b5720>\n",
+      "somaworkflow_computing_resources_config :   <soma.controller.controller.OpenKeyController object at 0x7f79640988b0>\n",
       "spm_directory :   <undefined>\n",
       "spm_standalone :   <undefined>\n",
       "spm_version :   <undefined>\n",
@@ -1823,10 +1823,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.080801Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.080251Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.103647Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.102967Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.613189Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.612668Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.634794Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.634230Z"
     }
    },
    "outputs": [
@@ -1896,10 +1896,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.106161Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.105955Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.118394Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.117726Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.637088Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.636885Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.649159Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.648510Z"
     }
    },
    "outputs": [
@@ -1947,10 +1947,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.121253Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.120842Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.127886Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.127241Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.651672Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.651462Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.658370Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.657835Z"
     }
    },
    "outputs": [],
@@ -1996,10 +1996,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.130402Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.129946Z",
-     "iopub.status.idle": "2024-04-02T08:26:29.145439Z",
-     "shell.execute_reply": "2024-04-02T08:26:29.144837Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.660736Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.660396Z",
+     "iopub.status.idle": "2024-04-11T14:17:34.675710Z",
+     "shell.execute_reply": "2024-04-11T14:17:34.675151Z"
     }
    },
    "outputs": [
@@ -2007,8 +2007,8 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "jobs: [<soma_workflow.client_types.Job object at 0x7fe530b9ed00>, <soma_workflow.client_types.Job object at 0x7fe530b9ed90>]\n",
-      "dependencies: {(<soma_workflow.client_types.Job object at 0x7fe530b9ed90>, <soma_workflow.client_types.Job object at 0x7fe530b9ed00>)}\n"
+      "jobs: [<soma_workflow.client_types.Job object at 0x7f7950c4e2b0>, <soma_workflow.client_types.Job object at 0x7f7950c4e370>]\n",
+      "dependencies: {(<soma_workflow.client_types.Job object at 0x7f7950c4e370>, <soma_workflow.client_types.Job object at 0x7f7950c4e2b0>)}\n"
      ]
     }
    ],
@@ -2039,10 +2039,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:29.148109Z",
-     "iopub.status.busy": "2024-04-02T08:26:29.147737Z",
-     "iopub.status.idle": "2024-04-02T08:26:32.210048Z",
-     "shell.execute_reply": "2024-04-02T08:26:32.209374Z"
+     "iopub.execute_input": "2024-04-11T14:17:34.677905Z",
+     "iopub.status.busy": "2024-04-11T14:17:34.677698Z",
+     "iopub.status.idle": "2024-04-11T14:17:37.803426Z",
+     "shell.execute_reply": "2024-04-11T14:17:37.802699Z"
     }
    },
    "outputs": [
@@ -2110,10 +2110,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:32.212829Z",
-     "iopub.status.busy": "2024-04-02T08:26:32.212452Z",
-     "iopub.status.idle": "2024-04-02T08:26:32.215487Z",
-     "shell.execute_reply": "2024-04-02T08:26:32.214973Z"
+     "iopub.execute_input": "2024-04-11T14:17:37.805999Z",
+     "iopub.status.busy": "2024-04-11T14:17:37.805833Z",
+     "iopub.status.idle": "2024-04-11T14:17:37.809246Z",
+     "shell.execute_reply": "2024-04-11T14:17:37.808734Z"
     }
    },
    "outputs": [],
@@ -2141,10 +2141,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:32.217724Z",
-     "iopub.status.busy": "2024-04-02T08:26:32.217413Z",
-     "iopub.status.idle": "2024-04-02T08:26:35.273919Z",
-     "shell.execute_reply": "2024-04-02T08:26:35.273277Z"
+     "iopub.execute_input": "2024-04-11T14:17:37.811432Z",
+     "iopub.status.busy": "2024-04-11T14:17:37.811285Z",
+     "iopub.status.idle": "2024-04-11T14:17:40.863575Z",
+     "shell.execute_reply": "2024-04-11T14:17:40.862775Z"
     }
    },
    "outputs": [
@@ -2182,10 +2182,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:35.277140Z",
-     "iopub.status.busy": "2024-04-02T08:26:35.276768Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.506888Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.506225Z"
+     "iopub.execute_input": "2024-04-11T14:17:40.866567Z",
+     "iopub.status.busy": "2024-04-11T14:17:40.866385Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.130646Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.129982Z"
     }
    },
    "outputs": [
@@ -2249,10 +2249,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.509567Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.509391Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.513258Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.512631Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.133531Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.133140Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.136972Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.136327Z"
     }
    },
    "outputs": [
@@ -2288,10 +2288,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.515459Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.515311Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.550751Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.550177Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.139687Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.139204Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.174220Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.173685Z"
     }
    },
    "outputs": [],
@@ -2336,10 +2336,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.553592Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.553388Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.590940Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.590290Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.177074Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.176764Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.212853Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.212186Z"
     }
    },
    "outputs": [
@@ -2422,10 +2422,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.593480Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.593320Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.626599Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.625953Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.215622Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.215155Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.247191Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.246613Z"
     }
    },
    "outputs": [
@@ -2473,10 +2473,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.629148Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.628984Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.632286Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.631763Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.249879Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.249467Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.252572Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.252048Z"
     }
    },
    "outputs": [],
@@ -2506,10 +2506,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.634720Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.634389Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.651036Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.650365Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.255145Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.254742Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.270925Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.270304Z"
     }
    },
    "outputs": [],
@@ -2584,10 +2584,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.653874Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.653514Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.657323Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.656734Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.273489Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.273054Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.276560Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.276068Z"
     }
    },
    "outputs": [],
@@ -2622,10 +2622,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.659919Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.659569Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.664945Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.664444Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.278921Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.278572Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.283757Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.283143Z"
     }
    },
    "outputs": [
@@ -2703,10 +2703,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.667395Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.667054Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.802238Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.801545Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.286142Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.285751Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.424375Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.423719Z"
     }
    },
    "outputs": [
@@ -2797,10 +2797,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.804975Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.804806Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.817671Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.817092Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.427228Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.426871Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.440124Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.439620Z"
     }
    },
    "outputs": [
@@ -2845,10 +2845,10 @@
     "deletable": true,
     "editable": true,
     "execution": {
-     "iopub.execute_input": "2024-04-02T08:26:38.820390Z",
-     "iopub.status.busy": "2024-04-02T08:26:38.819974Z",
-     "iopub.status.idle": "2024-04-02T08:26:38.823303Z",
-     "shell.execute_reply": "2024-04-02T08:26:38.822802Z"
+     "iopub.execute_input": "2024-04-11T14:17:44.442570Z",
+     "iopub.status.busy": "2024-04-11T14:17:44.442243Z",
+     "iopub.status.idle": "2024-04-11T14:17:44.445577Z",
+     "shell.execute_reply": "2024-04-11T14:17:44.444915Z"
     }
    },
    "outputs": [],