From fdc76e4fb341d9ada077377963df6e26b3c63583 Mon Sep 17 00:00:00 2001 From: Adam Forys Date: Mon, 22 Jul 2024 16:51:03 +0200 Subject: [PATCH 1/3] Upgrade roxygen version for documentation, add missing function to pkgdown --- .github/workflows/r-renv-lock.yml | 2 +- .lycheeignore | 1 + DESCRIPTION | 2 +- _pkgdown.yml | 1 + 4 files changed, 4 insertions(+), 2 deletions(-) diff --git a/.github/workflows/r-renv-lock.yml b/.github/workflows/r-renv-lock.yml index c19174ca..44142a3d 100644 --- a/.github/workflows/r-renv-lock.yml +++ b/.github/workflows/r-renv-lock.yml @@ -130,7 +130,7 @@ jobs: install_min_version("vctrs", "0.4.1") install_min_version("rlang", "1.0.6") renv::install("styler@1.10.2", dependencies = "none") - renv::install("roxygen2@7.3.1", dependencies = "none") + renv::install("roxygen2@7.3.2", dependencies = "none") renv::settings$snapshot.type("custom") renv::snapshot(force = TRUE, prompt = FALSE) diff --git a/.lycheeignore b/.lycheeignore index d64d767b..2727d327 100644 --- a/.lycheeignore +++ b/.lycheeignore @@ -5,5 +5,6 @@ https://packagemanager.posit.co/cran/2022-03-10/ https://packagemanager.posit.co/cran/latest roxygen2@7.2.3 roxygen2@7.3.1 +roxygen2@7.3.2 styler@1.10.2 .*@users.noreply.github.com diff --git a/DESCRIPTION b/DESCRIPTION index 8d15f491..7ea9063e 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -33,7 +33,7 @@ URL: https://pharmaverse.github.io/sdtm.oak/, https://github.com/pharmaverse/sdt Encoding: UTF-8 LazyData: true Roxygen: list(markdown = TRUE) -RoxygenNote: 7.3.1 +RoxygenNote: 7.3.2 Depends: R (>= 4.2) Imports: admiraldev, diff --git a/_pkgdown.yml b/_pkgdown.yml index df36c0c3..e280f58b 100644 --- a/_pkgdown.yml +++ b/_pkgdown.yml @@ -13,6 +13,7 @@ reference: contents: - assign - harcode + - derive_blfl - derive_seq - derive_study_day - assign_datetime From db24ab0a56232d8f4ca45488fc658b3aa828b762 Mon Sep 17 00:00:00 2001 From: galachad Date: Mon, 22 Jul 2024 14:57:25 +0000 Subject: [PATCH 2/3] Automatic renv profile update. --- renv/profiles/4.2/renv.lock | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/renv/profiles/4.2/renv.lock b/renv/profiles/4.2/renv.lock index c61838aa..0c9569a4 100644 --- a/renv/profiles/4.2/renv.lock +++ b/renv/profiles/4.2/renv.lock @@ -1165,7 +1165,7 @@ }, "roxygen2": { "Package": "roxygen2", - "Version": "7.3.1", + "Version": "7.3.2", "Source": "Repository", "Repository": "RSPM", "Requirements": [ @@ -1187,7 +1187,7 @@ "withr", "xml2" ], - "Hash": "c25fe7b2d8cba73d1b63c947bf7afdb9" + "Hash": "6ee25f9054a70f44d615300ed531ba8d" }, "rprojroot": { "Package": "rprojroot", From 47dae5645261bcdff4ed555632e7776da42987e2 Mon Sep 17 00:00:00 2001 From: galachad Date: Mon, 22 Jul 2024 15:01:18 +0000 Subject: [PATCH 3/3] Automatic renv profile update. --- renv.lock | 4 ++-- renv/profiles/4.3/renv.lock | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/renv.lock b/renv.lock index 41974601..81d0f3ce 100644 --- a/renv.lock +++ b/renv.lock @@ -1165,7 +1165,7 @@ }, "roxygen2": { "Package": "roxygen2", - "Version": "7.3.1", + "Version": "7.3.2", "Source": "Repository", "Repository": "RSPM", "Requirements": [ @@ -1187,7 +1187,7 @@ "withr", "xml2" ], - "Hash": "c25fe7b2d8cba73d1b63c947bf7afdb9" + "Hash": "6ee25f9054a70f44d615300ed531ba8d" }, "rprojroot": { "Package": "rprojroot", diff --git a/renv/profiles/4.3/renv.lock b/renv/profiles/4.3/renv.lock index 41974601..81d0f3ce 100644 --- a/renv/profiles/4.3/renv.lock +++ b/renv/profiles/4.3/renv.lock @@ -1165,7 +1165,7 @@ }, "roxygen2": { "Package": "roxygen2", - "Version": "7.3.1", + "Version": "7.3.2", "Source": "Repository", "Repository": "RSPM", "Requirements": [ @@ -1187,7 +1187,7 @@ "withr", "xml2" ], - "Hash": "c25fe7b2d8cba73d1b63c947bf7afdb9" + "Hash": "6ee25f9054a70f44d615300ed531ba8d" }, "rprojroot": { "Package": "rprojroot",