diff --git a/DESCRIPTION b/DESCRIPTION index 714525c5..ce8b29a7 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -24,7 +24,7 @@ Description: An EDC and Data Standard-agnostic SDTM data transformation engine automate the conversion of raw clinical data to SDTM through standardized mapping algorithms. SDTM is one of the required standards for data submission to FDA (U.S.) and PMDA (Japan). SDTM standards are implemented - in accordance with the SDTM Implementation guide as defined by CDISC + in accordance with the SDTM Implementation Guide as defined by CDISC . Language: en-US License: Apache License (>= 2) diff --git a/README.Rmd b/README.Rmd index eea23ea5..d24d7a47 100644 --- a/README.Rmd +++ b/README.Rmd @@ -13,13 +13,16 @@ knitr::opts_chunk$set( ) ``` -# sdtm.oak +# sdtm.oak [![CRAN status](https://www.r-pkg.org/badges/version/sdtm.oak)](https://CRAN.R-project.org/package=sdtm.oak) -An EDC and Data Standard agnostic SDTM data transformation engine that automates the transformation of raw clinical data in ODM format to SDTM based on standard mapping algorithms +An EDC and Data Standard agnostic solution that enables the pharmaceutical +programming community to develop SDTM datasets in R. The reusable algorithms +concept in `{sdtm.oak}` provides a framework for modular programming and also +can automate SDTM creation based on the standard SDTM spec. ## Installation diff --git a/README.md b/README.md index 04f2fa5b..f3e1c0c0 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ -# sdtm.oak +# sdtm.oak @@ -9,9 +9,11 @@ status](https://www.r-pkg.org/badges/version/sdtm.oak)](https://CRAN.R-project.org/package=sdtm.oak) -An EDC and Data Standard agnostic SDTM data transformation engine that -automates the transformation of raw clinical data in ODM format to SDTM -based on standard mapping algorithms +An EDC and Data Standard agnostic solution that enables the +pharmaceutical programming community to develop SDTM datasets in R. The +reusable algorithms concept in `{sdtm.oak}` provides a framework for +modular programming and also can automate SDTM creation based on the +standard SDTM spec. ## Installation diff --git a/inst/WORDLIST b/inst/WORDLIST index 65b6b4f9..50b2eb7e 100644 --- a/inst/WORDLIST +++ b/inst/WORDLIST @@ -7,4 +7,10 @@ dtc funder vectorized ORCID +PMDA +CDISC iso +AE +AESTDY +CMSTDY +DM diff --git a/man/figures/logo.svg b/man/figures/logo.svg new file mode 100644 index 00000000..cf81b6f7 --- /dev/null +++ b/man/figures/logo.svg @@ -0,0 +1,11488 @@ + + + + diff --git a/man/sdtm.oak-package.Rd b/man/sdtm.oak-package.Rd index fc991afe..bbdd9816 100644 --- a/man/sdtm.oak-package.Rd +++ b/man/sdtm.oak-package.Rd @@ -6,7 +6,7 @@ \alias{sdtm.oak-package} \title{sdtm.oak: SDTM Data Transformation Engine} \description{ -An EDC and Data Standard-agnostic SDTM data transformation engine designed for SDTM programming in R. Powered by metadata sdtm.oak can automate the conversion of raw clinical data to SDTM through standardized mapping algorithms. SDTM is one of the required standards for data submission to FDA (U.S.) and PMDA (Japan). SDTM standards are implemented in accordance with the SDTM Implementation guide as defined by CDISC \url{https://www.cdisc.org/standards/foundational/sdtmig}. +An EDC and Data Standard-agnostic SDTM data transformation engine designed for SDTM programming in R. Powered by metadata sdtm.oak can automate the conversion of raw clinical data to SDTM through standardized mapping algorithms. SDTM is one of the required standards for data submission to FDA (U.S.) and PMDA (Japan). SDTM standards are implemented in accordance with the SDTM Implementation Guide as defined by CDISC \url{https://www.cdisc.org/standards/foundational/sdtmig}. } \seealso{ Useful links: diff --git a/pkgdown/favicon/apple-touch-icon-120x120.png b/pkgdown/favicon/apple-touch-icon-120x120.png new file mode 100644 index 00000000..daf9a2e3 Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon-120x120.png differ diff --git a/pkgdown/favicon/apple-touch-icon-152x152.png b/pkgdown/favicon/apple-touch-icon-152x152.png new file mode 100644 index 00000000..6a4df8ef Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon-152x152.png differ diff --git a/pkgdown/favicon/apple-touch-icon-180x180.png b/pkgdown/favicon/apple-touch-icon-180x180.png new file mode 100644 index 00000000..176544a4 Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon-180x180.png differ diff --git a/pkgdown/favicon/apple-touch-icon-60x60.png b/pkgdown/favicon/apple-touch-icon-60x60.png new file mode 100644 index 00000000..2f7778bd Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon-60x60.png differ diff --git a/pkgdown/favicon/apple-touch-icon-76x76.png b/pkgdown/favicon/apple-touch-icon-76x76.png new file mode 100644 index 00000000..652aaed3 Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon-76x76.png differ diff --git a/pkgdown/favicon/apple-touch-icon.png b/pkgdown/favicon/apple-touch-icon.png new file mode 100644 index 00000000..3ad099a4 Binary files /dev/null and b/pkgdown/favicon/apple-touch-icon.png differ diff --git a/pkgdown/favicon/favicon-16x16.png b/pkgdown/favicon/favicon-16x16.png new file mode 100644 index 00000000..bd83d84f Binary files /dev/null and b/pkgdown/favicon/favicon-16x16.png differ diff --git a/pkgdown/favicon/favicon-32x32.png b/pkgdown/favicon/favicon-32x32.png new file mode 100644 index 00000000..6b88bb19 Binary files /dev/null and b/pkgdown/favicon/favicon-32x32.png differ diff --git a/pkgdown/favicon/favicon.ico b/pkgdown/favicon/favicon.ico new file mode 100644 index 00000000..cb14bc2f Binary files /dev/null and b/pkgdown/favicon/favicon.ico differ diff --git a/vignettes/articles/algorithms.Rmd b/vignettes/articles/algorithms.Rmd index f3a5317b..27d26da7 100644 --- a/vignettes/articles/algorithms.Rmd +++ b/vignettes/articles/algorithms.Rmd @@ -2,7 +2,7 @@ title: "Algorithms & Sub-Algorithms" output: rmarkdown::html_vignette vignette: > - %\VignetteIndexEntry{Algorithms} + %\VignetteIndexEntry{Algorithms & Sub-Algorithms} %\VignetteEncoding{UTF-8} %\VignetteEngine{knitr::rmarkdown} editor_options: