From aab3dec77ae39e77ffc5bba4f33e6da383ce02e5 Mon Sep 17 00:00:00 2001 From: Peter Cock Date: Fri, 2 Oct 2020 14:06:54 +0100 Subject: [PATCH] webin-cli only does reads for one sample at a time Closes #23 --- submit/reads/webin-cli.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/submit/reads/webin-cli.md b/submit/reads/webin-cli.md index a3f93bc9..06ca93ce 100644 --- a/submit/reads/webin-cli.md +++ b/submit/reads/webin-cli.md @@ -34,7 +34,9 @@ The manifest file is specified using the `-manifest ` option. A sequence read submission consists of the following files: - 1 manifest file -- 1 BAM file, 1 CRAM file, or 1-2 Fastq files +- 1 BAM file, 1 CRAM file, 1 Fastq file, or a pair of Fastq files + +Multiple submissions must be done separately, each with their own manifest file. ### Manifest file