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DESCRIPTION
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DESCRIPTION
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Package: devgru
Title: Developmental environment for GenomicRanges utilities
Version: 0.0.0.9000
Authors@R:
person("Patrick", "Blaney", email = "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-9319-8866"))
Description: A packaged-up environment in R specifically for various utilities that are built on GenomicRanges framework.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 4.1.0)
Imports:
BSgenome.Hsapiens.UCSC.hg38,
gUtils,
GenomicRanges,
GenomeInfoDb,
data.table,
rtracklayer,
dplyr,
readr,
fishHook,
VariantAnnotation,
stringr,
S4Vectors,
Biostrings,
librarian,
doParallel,
foreach,
R.utils,
ggplot2,
scales,
paletteer,
patchwork,
ggpubr,
ggside,
paint,
reshape2,
purrr,
ggridges,
stats,
ggfittext,
DNAcopy
Remotes:
github::mskilab-org/gUtils,
github::mskilab-org/fishHook