kmer_test.go

/* Copyright (C) 2019 Philipp Benner
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

package gonetics

/* -------------------------------------------------------------------------- */

//import "fmt"
import "testing"

/* -------------------------------------------------------------------------- */

func TestKmer1(test *testing.T) {
  a := Kmer( "anctc")
  b := Kmer("aagctc")
  if !a.Matches(b, GappedNucleotideAlphabet{}) {
    test.Error("test failed")
  }
}

func TestKmer2(test *testing.T) {
  a := Kmer( "anctc")
  b := Kmer("aagntc")
  if a.Matches(b, GappedNucleotideAlphabet{}) {
    test.Error("test failed")
  }
}