diff --git a/base-notebook/conda-linux-64.lock b/base-notebook/conda-linux-64.lock index f752889c..4cbe2862 100644 --- a/base-notebook/conda-linux-64.lock +++ b/base-notebook/conda-linux-64.lock @@ -6,7 +6,7 @@ https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2020.12.5-ha8785 https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.35.1-hea4e1c9_2.tar.bz2#83610dba766a186bdc7a116053b782a4 https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-9.3.0-hff62375_18.tar.bz2#86a1cade1bc2b99a6419ba980f730bff https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-9.3.0-h6de172a_18.tar.bz2#2f03cd1e5c966d4af5822c7ae089ab03 -https://conda.anaconda.org/conda-forge/linux-64/pandoc-2.11.4-h7f98852_0.tar.bz2#1c827fa4db40e5e92c2619ba8fe30500 +https://conda.anaconda.org/conda-forge/linux-64/pandoc-2.12-h7f98852_0.tar.bz2#21d4ae04f0c60b1e1150ded8ac24b4c2 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https://conda.anaconda.org/conda-forge/linux-64/bokeh-2.3.0-py38h578d9bd_0.tar.bz2#34a22638216ab89feae74536210540b7 @@ -152,12 +153,12 @@ https://conda.anaconda.org/conda-forge/noarch/google-auth-1.24.0-pyhd3deb0d_0.ta https://conda.anaconda.org/conda-forge/noarch/jupyter_telemetry-0.1.0-pyhd8ed1ab_1.tar.bz2#bb9ebdb6d5aa2622484aff1faceee181 https://conda.anaconda.org/conda-forge/noarch/jupyterlab_pygments-0.1.2-pyh9f0ad1d_0.tar.bz2#2cbd910890bb328e8959246a1e16fac7 https://conda.anaconda.org/conda-forge/noarch/nbformat-5.1.2-pyhd8ed1ab_1.tar.bz2#9633dbb668ac1f9266427672816899dc -https://conda.anaconda.org/conda-forge/noarch/urllib3-1.26.3-pyhd8ed1ab_0.tar.bz2#25573e57774dd54cfa848e5dd44503ed +https://conda.anaconda.org/conda-forge/noarch/urllib3-1.26.4-pyhd8ed1ab_0.tar.bz2#d7b20b328e23d993994ea02077c009c0 https://conda.anaconda.org/conda-forge/noarch/wcwidth-0.2.5-pyh9f0ad1d_2.tar.bz2#5266fcd697043c59621fda522b3d78ee https://conda.anaconda.org/conda-forge/noarch/dask-2021.3.0-pyhd8ed1ab_0.tar.bz2#ad8913a398eedda25f6243d02c973f28 https://conda.anaconda.org/conda-forge/noarch/kubernetes_asyncio-12.0.1-pyh9f0ad1d_0.tar.bz2#e5022855c95c58c504f0c46e603339b2 https://conda.anaconda.org/conda-forge/noarch/nbclient-0.5.3-pyhd8ed1ab_0.tar.bz2#67f12831640fde52fe9be1bbc6b699e7 -https://conda.anaconda.org/conda-forge/noarch/prompt-toolkit-3.0.16-pyha770c72_0.tar.bz2#1a7cec3da4a94cd23d3de4155bff4941 +https://conda.anaconda.org/conda-forge/noarch/prompt-toolkit-3.0.17-pyha770c72_0.tar.bz2#d3ff1dc51da26f2757c8d95c3522138e https://conda.anaconda.org/conda-forge/noarch/requests-2.25.1-pyhd3deb0d_0.tar.bz2#ae687aba31a1c400192a86a2e993ffdc https://conda.anaconda.org/conda-forge/noarch/adal-1.2.6-pyh44b312d_0.tar.bz2#df655c77a2dc5e0afa4beb0101bb261d https://conda.anaconda.org/conda-forge/linux-64/dask-gateway-0.9.0-py38h578d9bd_0.tar.bz2#b6a3b03e79063ad824dfafefd0dea862 @@ -178,6 +179,6 @@ https://conda.anaconda.org/conda-forge/noarch/nbgitpuller-0.9.0-py_0.tar.bz2#ce0 https://conda.anaconda.org/conda-forge/noarch/pangeo-dask-2021.03.06-hd8ed1ab_0.tar.bz2#66ff5ad083c0dedaad4d4a25e95ad543 https://conda.anaconda.org/conda-forge/linux-64/widgetsnbextension-3.5.1-py38h578d9bd_4.tar.bz2#beb8a105545382ba138c81c926289b5b https://conda.anaconda.org/conda-forge/noarch/ipywidgets-7.6.3-pyhd3deb0d_0.tar.bz2#536a9ed6d9e740f2b83d1a3c388e4388 -https://conda.anaconda.org/conda-forge/noarch/jupyterlab-3.0.9-pyhd8ed1ab_0.tar.bz2#083a50575417a6148ce09133f6d4d63d +https://conda.anaconda.org/conda-forge/noarch/jupyterlab-3.0.11-pyhd8ed1ab_0.tar.bz2#af8e216cd0b7f5e4f9adc17b68857d41 https://conda.anaconda.org/conda-forge/noarch/dask-labextension-5.0.1-pyhd8ed1ab_1.tar.bz2#08196a3509bb10869c2ae06b198ea477 https://conda.anaconda.org/conda-forge/noarch/pangeo-notebook-2021.03.06-hd8ed1ab_0.tar.bz2#9f9b039950c19f4338a02857e6e4a2ae diff --git a/base-notebook/packages.txt b/base-notebook/packages.txt index 3ca5eec6..5c352d37 100644 --- a/base-notebook/packages.txt +++ b/base-notebook/packages.txt @@ -2,7 +2,7 @@ _libgcc_mutex-0.1 _openmp_mutex-4.5 adal-1.2.6 aiohttp-3.7.4 -alembic-1.5.6 +alembic-1.5.7 anyio-2.2.0 argon2-cffi-20.1.0 async-timeout-3.0.1 @@ -25,7 +25,7 @@ cffi-1.14.5 chardet-4.0.0 click-7.1.2 cloudpickle-1.6.0 -cryptography-3.4.4 +cryptography-3.4.6 cytoolz-0.11.0 dask-2021.3.0 dask-core-2021.3.0 @@ -33,15 +33,16 @@ dask-gateway-0.9.0 dask-kubernetes-0.11.0 dask-labextension-5.0.1 decorator-4.4.2 -defusedxml-0.7.0 +defusedxml-0.7.1 distributed-2021.3.0 entrypoints-0.3 freetype-2.10.4 fsspec-0.8.7 google-auth-1.24.0 +greenlet-1.0.0 heapdict-1.0.1 idna-2.10 -importlib-metadata-3.7.0 +importlib-metadata-3.7.3 ipykernel-5.5.0 ipython-7.21.0 ipython_genutils-0.2.0 @@ -53,13 +54,13 @@ json5-0.9.5 jsonschema-3.2.0 jupyter-packaging-0.7.12 jupyter-server-proxy-1.6.0 -jupyter_client-6.1.11 +jupyter_client-6.1.12 jupyter_core-4.7.1 jupyter_server-1.4.1 jupyter_telemetry-0.1.0 jupyterhub-base-1.3.0 jupyterhub-singleuser-1.3.0 -jupyterlab-3.0.9 +jupyterlab-3.0.11 jupyterlab_pygments-0.1.2 jupyterlab_server-2.3.0 jupyterlab_widgets-1.0.0 @@ -108,7 +109,7 @@ openssl-1.1.1j packaging-20.9 pamela-1.0.0 pandas-1.2.3 -pandoc-2.11.4 +pandoc-2.12 pandocfilters-1.4.2 pangeo-dask-2021.03.06 pangeo-notebook-2021.03.06 @@ -116,17 +117,17 @@ parso-0.8.1 partd-1.1.0 pexpect-4.8.0 pickleshare-0.7.5 -pillow-8.1.1 -pip-20.0.2 +pillow-8.1.2 +pip-20.3.4 prometheus_client-0.9.0 -prompt-toolkit-3.0.16 +prompt-toolkit-3.0.17 psutil-5.8.0 ptyprocess-0.7.0 pyasn1-0.4.8 pyasn1-modules-0.2.7 pycparser-2.20 pycurl-7.43.0.6 -pygments-2.8.0 +pygments-2.8.1 pyjwt-2.0.1 pyopenssl-20.0.1 pyparsing-2.4.7 @@ -153,10 +154,10 @@ simpervisor-0.4 six-1.15.0 sniffio-1.2.0 sortedcontainers-2.3.0 -sqlalchemy-1.3.23 +sqlalchemy-1.4.1 sqlite-3.34.0 tblib-1.6.0 -terminado-0.9.2 +terminado-0.9.3 testpath-0.4.4 tk-8.6.10 toolz-0.11.1 @@ -164,7 +165,7 @@ tornado-6.1 traitlets-5.0.5 typing-extensions-3.7.4.3 typing_extensions-3.7.4.3 -urllib3-1.26.3 +urllib3-1.26.4 wcwidth-0.2.5 webencodings-0.5.1 websocket-client-0.57.0 diff --git a/ml-notebook/conda-linux-64.lock b/ml-notebook/conda-linux-64.lock index 18462c22..0a17f5b2 100644 --- a/ml-notebook/conda-linux-64.lock +++ b/ml-notebook/conda-linux-64.lock @@ -1,18 +1,18 @@ # platform: linux-64 -# env_hash: cdf8db304730cd975a32197e4696842a5e9fb48ac92375bcdcb8d6132a74bcb2 +# env_hash: 984bf0512e309580effc67aa070705dec0a68751d3218a7e098d5d1d3bd6700d @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://repo.anaconda.com/pkgs/main/linux-64/_tflow_select-2.1.0-gpu.conda#1b1de4b8b5bab444dc262a42f136a097 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2020.12.5-ha878542_0.tar.bz2#7eb5d4ffeee663caa1635cd67071bc1b https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.35.1-hea4e1c9_2.tar.bz2#83610dba766a186bdc7a116053b782a4 -https://conda.anaconda.org/conda-forge/linux-64/libgfortran4-7.5.0-h14aa051_18.tar.bz2#cbb6af25a21105611f901fa338d804d5 +https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-9.3.0-hff62375_18.tar.bz2#86a1cade1bc2b99a6419ba980f730bff https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-9.3.0-h6de172a_18.tar.bz2#2f03cd1e5c966d4af5822c7ae089ab03 -https://conda.anaconda.org/conda-forge/linux-64/llvm-openmp-11.0.1-h4bd325d_0.tar.bz2#8cf85a6eeaee28674a6124298e4f94b2 -https://conda.anaconda.org/conda-forge/linux-64/pandoc-2.11.4-h7f98852_0.tar.bz2#1c827fa4db40e5e92c2619ba8fe30500 +https://conda.anaconda.org/conda-forge/linux-64/pandoc-2.12-h7f98852_0.tar.bz2#21d4ae04f0c60b1e1150ded8ac24b4c2 https://conda.anaconda.org/conda-forge/noarch/poppler-data-0.4.10-0.tar.bz2#02204e159c8596584135923fd81a2c10 https://conda.anaconda.org/conda-forge/noarch/tzdata-2021a-he74cb21_0.tar.bz2#6f36861f102249fc54861ff9343c3fdd -https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-1_llvm.tar.bz2#fa8d764c883a53d22ce622bea830c818 -https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-7.5.0-h14aa051_18.tar.bz2#6b6d450f834ece56ad7cbb7e25f4381e +https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-9.3.0-hff62375_18.tar.bz2#db417845fae12a62b6720f09f51ab6a7 +https://conda.anaconda.org/conda-forge/linux-64/libgomp-9.3.0-h2828fa1_18.tar.bz2#fc7a2a7e6a741c8afdd764715ac7039d +https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-1_gnu.tar.bz2#561e277319a41d4f24f5c05a9ef63c04 https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-9.3.0-h2828fa1_18.tar.bz2#5a9490c49a3505a6d19bda012cde6ad3 https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.0-h9c3ff4c_0.tar.bz2#5e815e5126c6f7e34ab4496fa1b48dca https://conda.anaconda.org/conda-forge/linux-64/brotli-1.0.9-h9c3ff4c_4.tar.bz2#f4f75dc7038aaeb6eaae16a5ef5350b3 @@ -21,7 +21,7 @@ https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.17.1-h7f98852_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/charls-2.2.0-h9c3ff4c_0.tar.bz2#bc0a1a5c99af57d2821914ab074797f9 https://conda.anaconda.org/conda-forge/linux-64/cudatoolkit-10.1.243-h036e899_8.tar.bz2#394cc077c8139d21e95f9d257af64a26 https://conda.anaconda.org/conda-forge/linux-64/expat-2.2.10-h9c3ff4c_0.tar.bz2#c924bc4e7ae49118f6c97bd4357fed0e -https://conda.anaconda.org/conda-forge/linux-64/freexl-1.0.5-h516909a_1002.tar.bz2#c4226170e522c93f336dfe9c88437aeb +https://conda.anaconda.org/conda-forge/linux-64/freexl-1.0.6-h7f98852_0.tar.bz2#fb707484f02b122edec5fe3d1f3f552f https://conda.anaconda.org/conda-forge/linux-64/geos-3.9.1-h9c3ff4c_2.tar.bz2#b9a6d9422aed3ad84ec6ccee9bfcaa0f https://conda.anaconda.org/conda-forge/linux-64/giflib-5.2.1-h36c2ea0_2.tar.bz2#626e68ae9cc5912d6adb79d318cf962d https://conda.anaconda.org/conda-forge/linux-64/icu-68.1-h58526e2_0.tar.bz2#fc7a4271dc2a7f4fd78cd63695baf7c3 @@ -34,12 +34,12 @@ https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.7-h7f98852_5.tar.bz https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-h516909a_1.tar.bz2#6f8720dff19e17ce5d48cfe7f3d2f0a3 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.3-h58526e2_2.tar.bz2#665369991d8dd290ac5ee92fce3e6bf5 https://conda.anaconda.org/conda-forge/linux-64/libiconv-1.16-h516909a_0.tar.bz2#5c0f338a513a2943c659ae619fca9211 -https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.12-pthreads_hb3c22a3_1.tar.bz2#602e033fdeeae7a88dd90283aa777a1f +https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.12-pthreads_h4812303_1.tar.bz2#2c7126a584f05e7bc8885d64dad3d21a https://conda.anaconda.org/conda-forge/linux-64/libsodium-1.0.18-h36c2ea0_1.tar.bz2#c3788462a6fbddafdb413a9f9053e58d https://conda.anaconda.org/conda-forge/linux-64/libspatialindex-1.9.3-h9c3ff4c_3.tar.bz2#5cfecb0aa384fd3831cc106794e3f968 https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.32.1-h7f98852_1000.tar.bz2#772d69f030955d9646d3d0eaf21d859d https://conda.anaconda.org/conda-forge/linux-64/libuv-1.41.0-h7f98852_0.tar.bz2#808b41ebae1d9bd4aa8ffbc365d468c6 -https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.2.0-h7f98852_0.tar.bz2#747d8f09e5340bc40480eb765903ec97 +https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.2.0-h7f98852_2.tar.bz2#fb63a035a3b552c88a30d84b89ebf4c4 https://conda.anaconda.org/conda-forge/linux-64/libzopfli-1.0.3-h9c3ff4c_0.tar.bz2#c66fe2d123249af7651ebde8984c51c2 https://conda.anaconda.org/conda-forge/linux-64/lz4-c-1.9.3-h9c3ff4c_0.tar.bz2#4eb64ee0d5cd43096ffcf843c76b05d4 https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.2-h58526e2_4.tar.bz2#509f2a21c4a09214cd737a480dfd80c9 @@ -65,14 +65,14 @@ https://conda.anaconda.org/conda-forge/linux-64/cudnn-7.6.5.32-hc0a50b0_1.tar.bz https://repo.anaconda.com/pkgs/main/linux-64/cupti-10.1.168-0.conda#073e0478e7092ddf4945947d2ce2e633 https://conda.anaconda.org/conda-forge/linux-64/gettext-0.19.8.1-h0b5b191_1005.tar.bz2#ff6f69b593a9e74c0e6b61908ac513fa https://conda.anaconda.org/conda-forge/linux-64/hdf4-4.2.13-h10796ff_1004.tar.bz2#aa1b96c7801b4876bb40f46f4d519836 -https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-3_openblas.tar.bz2#45bf606ba7dc222c7c3eda0be241c948 +https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-8_openblas.tar.bz2#95cee6371a5b901797075040941171f3 https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1 https://conda.anaconda.org/conda-forge/linux-64/libllvm10-10.0.1-he513fc3_3.tar.bz2#b1c57947b2a9231e0cd037ab0ed96b5d https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.43.0-h812cca2_0.tar.bz2#1867d1e9658596b3fac8847a7702eef4 https://conda.anaconda.org/conda-forge/linux-64/libpng-1.6.37-h21135ba_2.tar.bz2#b6acf807307d033d4b7e758b4f44b036 -https://conda.anaconda.org/conda-forge/linux-64/libprotobuf-3.15.5-h780b84a_0.tar.bz2#9bd3fa8c45277e886ece845f187d1e74 +https://conda.anaconda.org/conda-forge/linux-64/libprotobuf-3.15.6-h780b84a_0.tar.bz2#76a5ad1e4a370df9c1ec15fa9d86e2a5 https://conda.anaconda.org/conda-forge/linux-64/librttopo-1.1.0-h1185371_6.tar.bz2#bdaaaa5a3984edea71596fc9cca74463 -https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.9.0-hab1572f_5.tar.bz2#18aaa1bd2238ae2b5e89591046973123 +https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.9.0-ha56f1ee_6.tar.bz2#f0dfb86444df325e599dbc3f4c0a3f5b https://conda.anaconda.org/conda-forge/linux-64/libxcb-1.13-h7f98852_1003.tar.bz2#a9371e9e40aded194dcba1447606c9a1 https://conda.anaconda.org/conda-forge/linux-64/libxml2-2.9.10-h72842e0_3.tar.bz2#5ed2c4742d5f1141783f484fe8974ccf https://conda.anaconda.org/conda-forge/linux-64/nccl-2.8.4.1-h8b44402_3.tar.bz2#f9038dc8b84d40494c205c55036a30eb @@ -86,17 +86,17 @@ https://conda.anaconda.org/conda-forge/linux-64/zstd-1.4.9-ha95c52a_0.tar.bz2#b4 https://conda.anaconda.org/conda-forge/linux-64/boost-cpp-1.74.0-hc6e9bd1_2.tar.bz2#eca3e3674bf1f00fcddd63e6668fd9dd https://conda.anaconda.org/conda-forge/linux-64/freetype-2.10.4-h0708190_1.tar.bz2#4a06f2ac2e5bfae7b6b245171c3f07aa https://conda.anaconda.org/conda-forge/linux-64/krb5-1.17.2-h926e7f8_0.tar.bz2#926325c11478d6e781e76072c117763b -https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-3_openblas.tar.bz2#2499ea2d37a37324abab3fd034faab44 -https://conda.anaconda.org/conda-forge/linux-64/libglib-2.66.7-h3e27bee_1.tar.bz2#dd273cc3560177ab37be0db469368bba -https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-3_openblas.tar.bz2#8fd9fca8f58e6e132f55dd2330cae671 +https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-8_openblas.tar.bz2#d8e2151683bc12acffedea26eba27e0f +https://conda.anaconda.org/conda-forge/linux-64/libglib-2.68.0-h3e27bee_1.tar.bz2#643d8c3c60790f01ff1dd7be9290a7df +https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-8_openblas.tar.bz2#9a860887c77e923c2807c715a7731fb8 https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.2.0-hdc55705_0.tar.bz2#f1406324f1d02fa26447a0a0f2dd0107 https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.34.0-h74cdb3f_0.tar.bz2#0a83e21e8c1929cc9a1e21ebb2459fc5 +https://conda.anaconda.org/conda-forge/linux-64/tiledb-2.2.6-h91fcb0e_0.tar.bz2#4e67c242bc99dcb15d787ffe8dad76c9 https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.7.0-h7f98852_0.tar.bz2#0cd07abd75b2fad023161c657524ddbd https://conda.anaconda.org/conda-forge/linux-64/fontconfig-2.13.1-hba837de_1004.tar.bz2#bbe61e6ae39440dd101d77bf80ffc2cd https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.12-hddcbb42_0.tar.bz2#797117394a4aa588de6d741b06fad80f https://conda.anaconda.org/conda-forge/linux-64/libcurl-7.75.0-hc4aaa36_0.tar.bz2#7283260c001a5f62d831b6c660c5afe7 https://conda.anaconda.org/conda-forge/linux-64/libkml-1.3.0-h02e6976_1012.tar.bz2#6c62399ba7d6168ee510acf23378a6d2 -https://conda.anaconda.org/conda-forge/linux-64/liblapacke-3.9.0-3_openblas.tar.bz2#aa936e0d7b7d3397e086873f8449a093 https://conda.anaconda.org/conda-forge/linux-64/libpq-13.1-hfd2b0eb_2.tar.bz2#d41b032f8940757263340b0918e62682 https://conda.anaconda.org/conda-forge/linux-64/openjpeg-2.4.0-hf7af979_0.tar.bz2#f677c4652b03ed5d1352bf976be7192c 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https://conda.anaconda.org/conda-forge/noarch/jupyterlab-nvdashboard-0.4.0-py_1.tar.bz2#db9d9de7fbfb8de2084bf8af033f01eb diff --git a/ml-notebook/environment.yml b/ml-notebook/environment.yml index c931c6b9..c2f428f5 100644 --- a/ml-notebook/environment.yml +++ b/ml-notebook/environment.yml @@ -12,6 +12,7 @@ dependencies: #rapidsai-nightly/linux-64::cudf - conda-forge/linux-64::cupy - pkgs/main/linux-64::tensorflow-gpu>=2 + - jax - adlfs - datashader - fsspec diff --git a/ml-notebook/packages.txt b/ml-notebook/packages.txt index d0103566..861baae1 100644 --- a/ml-notebook/packages.txt +++ b/ml-notebook/packages.txt @@ -1,14 +1,14 @@ _libgcc_mutex-0.1 _openmp_mutex-4.5 _tflow_select-2.1.0 -absl-py-0.11.0 +absl-py-0.12.0 adal-1.2.6 adlfs-0.6.3 affine-2.3.0 -aiobotocore-1.2.1 +aiobotocore-1.2.2 aiohttp-3.7.4 aioitertools-0.7.1 -alembic-1.5.6 +alembic-1.5.7 anyio-2.2.0 appdirs-1.4.4 argon2-cffi-20.1.0 @@ -17,7 +17,7 @@ astunparse-1.6.3 async-timeout-3.0.1 async_generator-1.10 attrs-20.3.0 -azure-core-1.10.0 +azure-core-1.12.0 azure-datalake-store-0.0.51 azure-identity-1.5.0 azure-storage-blob-12.6.0 @@ -25,7 +25,6 @@ babel-2.9.0 backcall-0.2.0 backports-1.0 backports.functools_lru_cache-1.6.1 -blas-2.3 bleach-3.3.0 blinker-1.4 blosc-1.21.0 @@ -53,7 +52,7 @@ click-plugins-1.1.1 cligj-0.7.1 cloudpickle-1.6.0 colorcet-2.0.6 -cryptography-3.4.4 +cryptography-3.4.6 cudatoolkit-10.1.243 cudnn-7.6.5.32 cupti-10.1.168 @@ -69,7 +68,7 @@ dask-labextension-5.0.1 datashader-0.12.0 datashape-0.5.4 decorator-4.4.2 -defusedxml-0.7.0 +defusedxml-0.7.1 distributed-2021.3.0 entrypoints-0.3 expat-2.2.10 @@ -78,7 +77,7 @@ fastrlock-0.5 fiona-1.8.18 fontconfig-2.13.1 freetype-2.10.4 -freexl-1.0.5 +freexl-1.0.6 fsspec-0.8.7 gast-0.4.0 gcsfs-0.7.2 @@ -86,12 +85,13 @@ gdal-3.2.1 geopandas-0.9.0 geos-3.9.1 geotiff-1.6.0 -geoviews-core-1.8.2 +geoviews-core-1.9.1 gettext-0.19.8.1 giflib-5.2.1 google-auth-1.24.0 google-auth-oauthlib-0.4.1 google-pasta-0.2.0 +greenlet-1.0.0 grpcio-1.36.1 h5netcdf-0.10.0 h5py-2.10.0 @@ -104,14 +104,16 @@ icu-68.1 idna-2.10 imagecodecs-2021.1.28 imageio-2.9.0 -importlib-metadata-3.7.0 -intake-0.6.1 -intake-xarray-0.4.1 +importlib-metadata-3.7.3 +intake-0.6.2 +intake-xarray-0.5.0 ipykernel-5.5.0 ipython-7.21.0 ipython_genutils-0.2.0 ipywidgets-7.6.3 isodate-0.6.0 +jax-0.2.10 +jaxlib-0.1.63 jedi-0.18.0 jinja2-2.11.3 jmespath-0.10.0 @@ -122,13 +124,13 @@ json5-0.9.5 jsonschema-3.2.0 jupyter-packaging-0.7.12 jupyter-server-proxy-1.6.0 -jupyter_client-6.1.11 +jupyter_client-6.1.12 jupyter_core-4.7.1 jupyter_server-1.4.1 jupyter_telemetry-0.1.0 jupyterhub-base-1.3.0 jupyterhub-singleuser-1.3.0 -jupyterlab-3.0.9 +jupyterlab-3.0.11 jupyterlab-nvdashboard-0.4.0 jupyterlab_pygments-0.1.2 jupyterlab_server-2.3.0 @@ -153,20 +155,20 @@ libev-4.33 libffi-3.3 libgcc-ng-9.3.0 libgdal-3.2.1 -libgfortran-ng-7.5.0 -libgfortran4-7.5.0 -libglib-2.66.7 +libgfortran-ng-9.3.0 +libgfortran5-9.3.0 +libglib-2.68.0 +libgomp-9.3.0 libiconv-1.16 libkml-1.3.0 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https://conda.anaconda.org/conda-forge/linux-64/xcape-0.1.2-py38he1ac83b_2.tar.bz2#eded43c36cad68c58751e698e194c11e https://conda.anaconda.org/conda-forge/noarch/xgcm-0.5.1-py_0.tar.bz2#935f4608a93c5bf80d9c33810ef40aa0 https://conda.anaconda.org/conda-forge/noarch/xhistogram-0.1.2-pyhd8ed1ab_0.tar.bz2#9568fe7b14f00abf45a955ae69cf5e38 @@ -494,7 +497,7 @@ https://conda.anaconda.org/conda-forge/noarch/dask-ml-1.8.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/google-auth-oauthlib-0.4.2-pyhd8ed1ab_0.tar.bz2#475c31ae29e0c07cbb9bb53871d51d42 https://conda.anaconda.org/conda-forge/noarch/intake-esm-2021.1.15-pyhd8ed1ab_0.tar.bz2#f9905ccbc28a73fc2fc17b6fed9b0bd6 https://conda.anaconda.org/conda-forge/noarch/intake-geopandas-0.2.4-pyhd8ed1ab_0.tar.bz2#3c312e7d39f008b38b87b1be0dfb3534 -https://conda.anaconda.org/conda-forge/noarch/intake-xarray-0.4.1-pyhd8ed1ab_0.tar.bz2#a3204c2105c162fb1c3087ee43513fdd 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https://conda.anaconda.org/conda-forge/noarch/xarrayutils-0.1.3-pyh9f0ad1d_0.tar.bz2#65cd573f598d7d46d8a1383aed1bdfbe https://conda.anaconda.org/conda-forge/noarch/azure-identity-1.5.0-pyhd8ed1ab_0.tar.bz2#2eed516543552db8c37e664fc571434b @@ -531,11 +534,11 @@ https://conda.anaconda.org/conda-forge/noarch/pangeo-dask-2021.03.06-hd8ed1ab_0. https://conda.anaconda.org/conda-forge/linux-64/widgetsnbextension-3.5.1-py38h578d9bd_4.tar.bz2#beb8a105545382ba138c81c926289b5b https://conda.anaconda.org/conda-forge/noarch/xarray-spatial-0.1.2-pyhd3deb0d_0.tar.bz2#82de1eecffa4939c5b38a37072c98a17 https://conda.anaconda.org/conda-forge/noarch/geocube-0.0.16-pyhd8ed1ab_0.tar.bz2#33591a4756559f238f347ad0ce859b85 -https://conda.anaconda.org/conda-forge/noarch/geoviews-core-1.8.2-py_0.tar.bz2#63dd61f554577d1ecc7687b0e073a8b4 +https://conda.anaconda.org/conda-forge/noarch/geoviews-core-1.9.1-pyha770c72_0.tar.bz2#2b6b08ce5c64d1661f9a69af0622e778 https://conda.anaconda.org/conda-forge/noarch/hvplot-0.7.1-pyh44b312d_0.tar.bz2#440851c33f336e5a6eb107120946869a https://conda.anaconda.org/conda-forge/noarch/ipywidgets-7.6.3-pyhd3deb0d_0.tar.bz2#536a9ed6d9e740f2b83d1a3c388e4388 https://conda.anaconda.org/conda-forge/noarch/jupyter-panel-proxy-0.1.0-py_0.tar.bz2#80c21feab6100e287707c371c752adea -https://conda.anaconda.org/conda-forge/noarch/jupyterlab-3.0.9-pyhd8ed1ab_0.tar.bz2#083a50575417a6148ce09133f6d4d63d +https://conda.anaconda.org/conda-forge/noarch/jupyterlab-3.0.11-pyhd8ed1ab_0.tar.bz2#af8e216cd0b7f5e4f9adc17b68857d41 https://conda.anaconda.org/conda-forge/noarch/dask-labextension-5.0.1-pyhd8ed1ab_1.tar.bz2#08196a3509bb10869c2ae06b198ea477 https://conda.anaconda.org/conda-forge/noarch/ipyleaflet-0.13.6-pyhd8ed1ab_1.tar.bz2#d2b17130435cd71c9cf80753d711088b https://conda.anaconda.org/conda-forge/noarch/ipyspin-0.1.5-pyhd8ed1ab_0.tar.bz2#5601ec318074faef9b482cfa6a1a8b4e diff --git a/pangeo-notebook/packages.txt b/pangeo-notebook/packages.txt index 304c4999..336b54fa 100644 --- a/pangeo-notebook/packages.txt +++ b/pangeo-notebook/packages.txt @@ -4,10 +4,10 @@ abseil-cpp-20200923.3 adal-1.2.6 adlfs-0.6.3 affine-2.3.0 -aiobotocore-1.2.1 +aiobotocore-1.2.2 aiohttp-3.7.4 aioitertools-0.7.1 -alembic-1.5.6 +alembic-1.5.7 amqp-5.0.5 anyio-2.2.0 appdirs-1.4.4 @@ -22,13 +22,13 @@ atk-1.0-2.36.0 attrs-20.3.0 av-8.0.3 aws-c-cal-0.4.5 -aws-c-common-0.5.1 +aws-c-common-0.5.2 aws-c-event-stream-0.2.7 -aws-c-io-0.9.0 +aws-c-io-0.9.1 aws-checksums-0.1.11 -aws-sdk-cpp-1.8.138 +aws-sdk-cpp-1.8.151 awscli-1.18.212 -azure-core-1.10.0 +azure-core-1.12.0 azure-datalake-store-0.0.51 azure-identity-1.5.0 azure-storage-blob-12.6.0 @@ -56,7 +56,8 @@ brunsli-0.1 bzip2-1.0.8 c-ares-1.17.1 ca-certificates-2020.12.5 -cached-property-1.5.1 +cached-property-1.5.2 +cached_property-1.5.2 cachetools-4.2.1 cachey-0.2.1 cairo-1.16.0 @@ -86,7 +87,7 @@ colorcet-2.0.6 colorspacious-1.1.2 configobj-5.0.6 croniter-0.3.36 -cryptography-3.4.4 +cryptography-3.4.6 curl-7.75.0 cycler-0.10.0 cytoolz-0.11.0 @@ -102,7 +103,7 @@ datashader-0.12.0 datashape-0.5.4 dbus-1.13.6 decorator-4.4.2 -defusedxml-0.7.0 +defusedxml-0.7.1 descartes-1.1.0 distributed-2021.3.0 docker-py-4.4.4 @@ -110,6 +111,7 @@ docker-pycreds-0.4.0 docopt-0.6.2 docrep-0.2.7 docutils-0.15.2 +donfig-0.6.0 eccodes-2.20.0 entrypoints-0.3 eofs-1.4.0 @@ -131,7 +133,7 @@ fontconfig-2.13.1 fonts-conda-ecosystem-1 fonts-conda-forge-1 freetype-2.10.4 -freexl-1.0.5 +freexl-1.0.6 fribidi-1.0.10 fsspec-0.8.7 future-0.18.2 @@ -144,29 +146,30 @@ geocube-0.0.16 geopandas-0.9.0 geos-3.9.1 geotiff-1.6.0 -geoviews-core-1.8.2 +geoviews-core-1.9.1 gettext-0.19.8.1 gflags-2.2.2 giflib-5.2.1 -glib-2.66.7 -glib-tools-2.66.7 +glib-2.68.0 +glib-tools-2.68.0 glog-0.4.0 gmp-6.2.1 gnutls-3.6.13 google-auth-1.24.0 google-auth-oauthlib-0.4.2 graphite2-1.3.13 -graphviz-2.46.1 -grpc-cpp-1.36.2 -gst-plugins-base-1.18.3 -gstreamer-1.18.3 +graphviz-2.47.0 +greenlet-1.0.0 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libgd-2.3.0 libgdal-3.2.1 libgfortran-ng-9.3.0 libgfortran5-9.3.0 -libglib-2.66.7 +libglib-2.68.0 libgomp-9.3.0 libiconv-1.16 libkml-1.3.0 @@ -256,7 +259,7 @@ libnghttp2-1.43.0 libopenblas-0.3.12 libpng-1.6.37 libpq-13.1 -libprotobuf-3.15.5 +libprotobuf-3.15.6 librsvg-2.50.3 librttopo-1.1.0 libsodium-1.0.18 @@ -264,7 +267,7 @@ libspatialindex-1.9.3 libspatialite-5.0.1 libssh2-1.9.0 libstdcxx-ng-9.3.0 -libthrift-0.13.0 +libthrift-0.14.1 libtiff-4.2.0 libtool-2.4.6 libutf8proc-2.6.1 @@ -276,7 +279,7 @@ libxcb-1.13 libxkbcommon-1.0.3 libxml2-2.9.10 libzopfli-1.0.3 -llvmlite-0.35.0 +llvmlite-0.36.0 locket-0.2.0 lz4-3.1.3 lz4-c-1.9.3 @@ -284,7 +287,7 @@ mako-1.1.4 markdown-3.3.4 markupsafe-1.1.1 marshmallow-3.10.0 -marshmallow-oneofschema-2.0.1 +marshmallow-oneofschema-2.1.0 matplotlib-3.3.4 matplotlib-base-3.3.4 mercantile-1.1.6 @@ -294,7 +297,7 @@ monotonic-1.5 mpi-1.0 mpi4py-3.0.3 mpich-3.4.1 -msal-1.9.0 +msal-1.10.0 msal_extensions-0.3.0 msgpack-python-1.0.2 msrest-0.6.21 @@ -322,9 +325,9 @@ nettle-3.6 networkx-2.5 nomkl-1.0 notebook-6.2.0 -nspr-4.29 -nss-3.62 -numba-0.52.0 +nspr-4.30 +nss-3.63 +numba-0.53.0 numcodecs-0.7.3 numpy-1.20.1 oauthlib-3.0.1 @@ -336,7 +339,7 @@ orc-1.6.7 packaging-20.9 pamela-1.0.0 pandas-1.2.3 -pandoc-2.11.4 +pandoc-2.12 pandocfilters-1.4.2 panel-0.11.0 pangeo-dask-2021.03.06 @@ -352,7 +355,7 @@ pcre-8.44 pendulum-2.1.2 pexpect-4.8.0 pickleshare-0.7.5 -pillow-8.1.1 +pillow-8.1.2 pint-0.16.1 pip-20.3.4 pixman-0.40.0 @@ -361,12 +364,12 @@ poppler-0.89.0 poppler-data-0.4.10 portalocker-1.7.0 postgresql-13.1 -prefect-0.14.11 +prefect-0.14.12 progressbar2-3.53.1 proj-7.2.0 prometheus_client-0.9.0 -prompt-toolkit-3.0.16 -prompt_toolkit-3.0.16 +prompt-toolkit-3.0.17 +prompt_toolkit-3.0.17 psutil-5.8.0 psycopg2-2.8.6 pthread-stubs-0.4 @@ -382,7 +385,7 @@ pycurl-7.43.0.6 pydantic-1.8.1 pydap-3.2.2 pyerfa-1.7.2 -pygments-2.8.0 +pygments-2.8.1 pyjwt-1.7.1 pykdtree-1.3.4 pymbolic-2020.1 @@ -396,20 +399,20 @@ pyqt-impl-5.12.3 pyqt5-sip-4.19.18 pyqtchart-5.12 pyqtwebengine-5.12.1 -pyresample-1.17.0 +pyresample-1.18.0 pyrsistent-0.17.3 pyshp-2.1.3 pysocks-1.7.1 pyspectral-0.10.4 -pystac-0.5.4 +pystac-0.5.5 python-3.8.8 python-blosc-1.10.2 python-box-5.3.0 python-dateutil-2.7.5 python-dotenv-0.15.0 python-editor-1.0.4 -python-geotiepoints-1.2.0 -python-gist-0.9.2 +python-geotiepoints-1.2.1 +python-gist-0.10.0 python-gnupg-0.4.6 python-graphviz-0.16 python-json-logger-2.0.1 @@ -417,7 +420,7 @@ python-kubernetes-12.0.1 python-slugify-4.0.1 python-utils-2.5.5 python_abi-3.8 -pytools-2021.1 +pytools-2021.2 pytz-2021.1 pytzdata-2020.1 pyviz_comms-2.0.1 @@ -443,10 +446,10 @@ s3fs-0.5.2 s3transfer-0.3.4 sat-search-0.3.0 sat-stac-0.4.1 -satpy-0.25.1 +satpy-0.26.0 scikit-image-0.18.1 scikit-learn-0.24.1 -scipy-1.6.0 +scipy-1.6.1 send2trash-1.5.0 setuptools-49.6.0 shapely-1.7.1 @@ -459,7 +462,7 @@ snuggs-1.4.7 sortedcontainers-2.3.0 soupsieve-2.0.1 sparse-0.11.2 -sqlalchemy-1.3.23 +sqlalchemy-1.4.1 sqlite-3.34.0 sshtunnel-0.3.1 starlette-base-0.13.6 @@ -468,12 +471,12 @@ supermercado-0.2.0 sysroot_linux-64-2.12 tabulate-0.8.9 tblib-1.6.0 -terminado-0.9.2 +terminado-0.9.3 testpath-0.4.4 text-unidecode-1.3 threadpoolctl-2.1.0 -tifffile-2021.3.5 -tiledb-2.2.4 +tifffile-2021.3.17 +tiledb-2.2.6 tiledb-py-0.8.4 tk-8.6.10 toml-0.10.2 @@ -482,14 +485,14 @@ tornado-6.1 tqdm-4.59.0 traitlets-5.0.5 traittypes-0.2.1 -trollimage-1.14.0 +trollimage-1.15.0 trollsift-0.3.5 typing-extensions-3.7.4.3 typing_extensions-3.7.4.3 tzcode-2021a tzdata-2021a unidecode-1.2.0 -urllib3-1.26.3 +urllib3-1.26.4 uvicorn-0.13.4 uvloop-0.15.2 vine-5.0.0 diff --git a/tests/test_ml-notebook.py b/tests/test_ml-notebook.py index 1691932e..cb7e2417 100644 --- a/tests/test_ml-notebook.py +++ b/tests/test_ml-notebook.py @@ -6,6 +6,7 @@ packages = [ # machine learning stuff 'tensorflow', 'skimage', 'sklearn', + 'jax', # cupy import fails unless on GPU-enabled node: #'cupy', #libcuda.so.1: cannot open shared object file: No such file or directory # Error w/conda solve of pytorch+tensorflow, so not currently installed