version_history.md

Version History

• v1.1.9 (2023-12-24)
  • Add Drive URL installation feature for convenient uploading of large files by users.
  • Real-time informative displays for API execution, and enable image zoom and download features.
  • Add Optional Cards for inputing optional parameters.
  • Accelerate program by image transmission, inference speed, and the page loading.
  • Provide one-click packaging and uploading, as well as one-click installation.
  • Fix some issues.
• v1.1.8 (2023-12-03)
  • Build Docker images for each library. Detailed tools list supported are available here.
  • Implement session management to facilitate simultaneous use by multiple dialogs.
  • Introduce session state rollback management, enabling users to revert to previous states and re-initiate inquiries.
• v1.1.7 (2023-12-01)
  • Added SONATA tutorial and MIOSTONE tutorial to showcase tool usage. Upload data and pretrained models onto drive.
  • Fixed bug in class-type APIs that caused errors when using methods. Methods can now be called and used correctly.
  • Resolved program exit issue without error throw. Errors are now handled properly with relevant error messages displayed.
  • Addressed retriever loading issue for specific tools. Indivdual retrievers can now be loaded and utilized correctly for each tool.
  • Enhance Robustness for basic type parameters. When entering result_* for basic type parameters, it will show result_* instead of "result_*" even it is of str type.
  • Fix bug of secrets variable in src/gpt/gpt_interface.py. Change the way to call OpenAI from langchain to OpenAI lib in models/model.py
• v1.1.6 (2023-11-27)
  • Support sharing your APP and install others' APP through our issue!
  • Enhance code robustness:
    • When it returns a tuple, split it to multiple variables by adding code result_n+1, result_n+2, ... = result_n.
    • During parameter inference, if a parameter is of 'NoneType', replace it with 'Any' to run smoothly.
    • Fix bug for adding quotation when user input value for str type parameters.
  • Release a package.
• v1.1.5 (2023-11-25)
  • Enhanced Docker Integration: Now featuring seamless packaging of both front-end and back-end components using Docker. This update simplifies deployment processes, ensuring a more streamlined development experience. We update chatbotuibiomania/biomania-together:v1.1.3.
  • Automated Docstring Addition: Users can now effortlessly convert GitHub source code to our tool with scripts that automatically add docstrings, freeing them from the manual effort previously required.
• v1.1.4 (2023-11-22)
  • Add manual support for converting R code to API_init.json. Will support for converting R code to APP later!
  • Release docker v1.1.3 with support for 12 PyPI biotools. Notice that some tools are only available under their own conda environment!! We update chatbotuibiomania/biomania-frontend:v1.1.3 and chatbotuibiomania/biomania-backend:v1.1.3.
  • Resolved issues related to Docker networking and Docker CUDA.
  • Improved the stability of the server demo by ensuring that it runs continuously in the background.
• v1.1.3 (2023-11-20)
  • Support web access on our server. Provide data/models for 12 tools mentioned in our paper through drive link.
  • Upload Composite API generation related codes.
  • Add demo chat for these tools under BioMANIA/examples.
  • Support manually set maximum concurrency for bulk instruction generation, added a visualization bar.
• v1.1.2 (2023-11-17)
  • Release docker v1.1.2 with support for 8 PyPI bio tools. We will release more libs in a later version.
  • Add manual support for converting github repo/source code to BioMANIA APP.
  • Support for switching libs during a dialog. Now you can let multiple tool cooperate inside one dialog!
• v1.1.1 (2023-11-10)
  • Initial release with analysis pipeline for scanpy.
  • Add one-click deploy using railway.