Pritykin Lab

All

17 repositories

guidescan2-analysis
Public
Python
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MIT License
•0•2•0•0•Updated Jan 11, 2025Jan 11, 2025
guidescan-cli
Public
a guideRNA database generation tool
bioinformatics cpp biology computational-biology bioinformatics-pipeline crispr crispr-cas9 grna bioinformatics-tool crispr-design
C++
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MIT License
•5•14•6•0•Updated Jan 1, 2025Jan 1, 2025
pritykinlab_onboarding
Public
Shell
•2•0•0•0•Updated Dec 9, 2024Dec 9, 2024
Gloss
Public
Python
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MIT License
•0•1•0•0•Updated Dec 3, 2024Dec 3, 2024
ArchVelo
Public
Jupyter Notebook
•0•0•0•0•Updated Nov 30, 2024Nov 30, 2024
gloss-paper-analysis
Public
companion to Gloss package, holding paper analysis
Jupyter Notebook
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MIT License
•0•0•0•0•Updated Oct 29, 2024Oct 29, 2024
metadomain_paper
Public
Jupyter Notebook
•0•0•0•0•Updated Oct 14, 2024Oct 14, 2024
InterDomain
Public
Code to run metadomain calling on your dataset
Python
•0•1•1•0•Updated Oct 9, 2024Oct 9, 2024
guidescanpy
Public
Python
•1•2•8•2•Updated Sep 23, 2024Sep 23, 2024
ulipstic-analysis
Public
Jupyter Notebook
•3•8•0•0•Updated Jul 9, 2024Jul 9, 2024
preprocessing_benchmarking
Public
0•0•2•0•Updated Jun 5, 2024Jun 5, 2024
pritykinlab.github.io
Public
HTML
•0•1•0•0•Updated May 12, 2024May 12, 2024
drosophila-microc-zga
Public
Analysis of Drosophila Micro-C at and around ZGA
Jupyter Notebook
•0•0•0•0•Updated Apr 10, 2024Apr 10, 2024
guidescan-frontend
Public
JavaScript
•1•0•0•0•Updated May 30, 2023May 30, 2023
snakemake-bulkrna-seq
Public
A snakemake workflow for bulk RNA-seq data preprocessing including sequence alignment, quality check etc.
Python
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BSD 3-Clause "New" or "Revised" License
•0•1•0•0•Updated May 4, 2023May 4, 2023
guidescan-web
Public
A guideRNA design tool for the modern era.
Clojure
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Other
•2•0•0•0•Updated Apr 20, 2023Apr 20, 2023
bulkrna-differential-analysis
Public
Jupyter Notebook
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Feb 7, 2023Feb 7, 2023