Repositories list

• container-pwiz

  Public
  The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis, developed by the Proteowizard Team at http://proteowizard.sourceforge.net/. This repository contains the Docker image to convert from many vendor raw data formats to mzML via Li…

  HTML

  •8•21•5•0•Updated Aug 25, 2023Aug 25, 2023

• ng2-phenomenal-portal

  Public
  PhenoMeNal Cloud Research Environment

  TypeScript

  •2•1•9•26•Updated Jan 3, 2023Jan 3, 2023

• cloud-deploy-kubenow-cerebellin-20190625

  Public
  Shell

  •

  Apache License 2.0

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-dalcotidine-20190625

  Public
  Shell

  •

  Apache License 2.0

  •0•0•0•8•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-cerebellin-20180523

  Public
  cloud-deploy-kubenow-cerebellin with a new name

  Shell

  •

  Apache License 2.0

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-cerebellin-20181206

  Public
  Shell

  •

  Apache License 2.0

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-dalcotidine-20181206

  Public
  Shell

  •

  Apache License 2.0

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow

  Public
  This repository contains scripts to manage the PhenoMeNal cloud CRE.

  Shell

  •

  Apache License 2.0

  •6•1•4•6•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-dalcotidine

  Public
  Cloud deploy kubenow fork for Dalcotidine release - A separate clone is needed instead of just a branch due to the inability of the TSI Portal backend to work against a different branch than master:(

  Shell

  •

  Apache License 2.0

  •1•1•0•6•Updated Dec 8, 2022Dec 8, 2022

• cloud-deploy-kubenow-cerebellin

  Public
  Cloud deploy kubenow snapshot for Cerebellin

  Shell

  •

  Apache License 2.0

  •2•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• docker-compassxport

  Public
  Dockerfile

  •

  Apache License 2.0

  •3•2•1•0•Updated Sep 19, 2022Sep 19, 2022

• container-nmr-integrals

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated May 25, 2021May 25, 2021

• KubeNow

  Public
  Deploy Kubernetes. Now!

  HCL

  •

  Apache License 2.0

  •40•0•0•0•Updated May 1, 2020May 1, 2020

• helm-charts

  Public
  PhenoMeNal Helm Charts

  Smarty

  •5•2•0•1•Updated Apr 21, 2020Apr 21, 2020

• KubeNow-plugin

  Public
  PhenoMeNal deployment as a plugin for KubeNow

  Shell

  •2•4•8•0•Updated Jan 11, 2020Jan 11, 2020

• tutorial_utils

  Public
  Utility scripts for PhenoMeNal tutorials and practical sessions

  Python

  •0•0•2•0•Updated Oct 21, 2019Oct 21, 2019

• container-xcms

  Public
  Container for xcms + various R scripts

  R

  •

  MIT License

  •6•1•0•0•Updated Aug 27, 2019Aug 27, 2019

• container-msnbase

  Public
  Basic plotting, data manipulation and processing of MS-based Proteomics data.

  R

  •4•0•0•0•Updated Aug 14, 2019Aug 14, 2019

• container-phenomenal-portal

  Public
  Dockerfile

  •1•2•4•0•Updated Jul 4, 2019Jul 4, 2019

• container-galaxy-k8s-runtime

  Public
  PhenoMeNal runtime for Galaxy running inside a container orchestrator

  JavaScript

  •

  Apache License 2.0

  •18•5•17•4•Updated Jul 3, 2019Jul 3, 2019

• container-cfmid

  Public
  R

  •1•0•0•0•Updated Jun 18, 2019Jun 18, 2019

• container-csifingerid

  Public
  MAXScript

  •1•0•0•0•Updated Jun 7, 2019Jun 7, 2019

• container-tamenmr

  Public
  Repository of tameNMR

  Shell

  •

  Apache License 2.0

  •0•0•2•1•Updated May 13, 2019May 13, 2019

• bioc_docker

  Public
  Docker containers for Bioconductor

  R

  •

  Artistic License 2.0

  •26•0•0•0•Updated Apr 3, 2019Apr 3, 2019

• galaxy

  Public
  Data intensive science for everyone.

  Python

  •

  Other

  •1k•3•3•1•Updated Feb 20, 2019Feb 20, 2019

• php-phenomenal-portal-wiki

  Public
  PHP

  •1•0•1•0•Updated Jan 17, 2019Jan 17, 2019

• container-portal-metadata-backend

  Public
  Container for the PhenoMeNal portal metadata backend

  Shell

  •1•0•0•0•Updated Dec 20, 2018Dec 20, 2018

• portal-metadata-backend

  Public
  PHP

  •1•0•0•0•Updated Dec 20, 2018Dec 20, 2018

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •3.3k•0•0•0•Updated Dec 17, 2018Dec 17, 2018

• container-transformation

  Public
  1•0•1•0•Updated Dec 15, 2018Dec 15, 2018