Mazurowski Lab
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26 repositories
SegmentAnyBone
PublicSegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRIfinetune-SAM
PublicThis is an official repo for fine-tuning SAM to customized medical images.- [MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.
SlicerSegmentHumanBody
Public3D Slicer extension for SegmentAnyBone developed by Mazurowski LabSlicerSegmentWithSAM
Public3D Slicer extension for Segment Anything Model (SAM) developed by Metaintrinsic-properties
Public[ICLR 2024] Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.MRI-parameter-prediction
Public(MIDL 2023) Code for "Reverse Engineering Breast MRIs: Predicting Acquisition Parameters Directly from Images"- (MICCAI 2022) Code for "The Intrinsic Manifolds of Radiological Images and their Role in Deep Learning" (intrinsic dimensions)
ContourDiff
Public- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
picard-anomalydetection
PublicPluralistic Image Completion for Anomaly Detection (Med. Image Anal. 2023)SlicerExtensionsIndex
Public- Single-image test-time domain adaptation for segmentation models.
- SWSSL - Sliding window-based self-supervised learning for anomaly detection in high-resolution images (IEEE Trans. on Medical Imaging 2023)
ExtensionsIndexStable
PublicDBTex-baseline
Public- Library of lesion detection algorithm codebases from the DBTex Digital Breast Tomosynthesis Lesion Detection Challenge
- Source code for my blog post tutorial about how to use deep learning on MR images.
ExtensionsIndex
PublicSupermask
Publicknee_clf
PublicbreastMRI_styletransfer
PublicCode for our paper "Deep Learning for Breast MRI Style Transfer with Limited Training Data".duke-dbt-data
Public