diff --git a/target/docker/common/create_component/.config.vsh.yaml b/target/docker/common/create_component/.config.vsh.yaml index ca423815..75b9b891 100644 --- a/target/docker/common/create_component/.config.vsh.yaml +++ b/target/docker/common/create_component/.config.vsh.yaml @@ -134,5 +134,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/common/create_component" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/common/create_component/create_component" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/common/create_component/create_component b/target/docker/common/create_component/create_component index ea2b60df..16576a77 100755 --- a/target/docker/common/create_component/create_component +++ b/target/docker/common/create_component/create_component @@ -437,9 +437,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "ruamel.yaml" LABEL org.opencontainers.image.description="Companion container for running component common create_component" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/common/sync_test_resources/.config.vsh.yaml b/target/docker/common/sync_test_resources/.config.vsh.yaml index e703acf9..9ccf9a9e 100644 --- a/target/docker/common/sync_test_resources/.config.vsh.yaml +++ b/target/docker/common/sync_test_resources/.config.vsh.yaml @@ -117,5 +117,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/common/sync_test_resources" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/common/sync_test_resources/sync_test_resources" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/common/sync_test_resources/sync_test_resources b/target/docker/common/sync_test_resources/sync_test_resources index 27d5239b..fae890f5 100755 --- a/target/docker/common/sync_test_resources/sync_test_resources +++ b/target/docker/common/sync_test_resources/sync_test_resources @@ -434,9 +434,9 @@ ENTRYPOINT [] RUN : LABEL org.opencontainers.image.description="Companion container for running component common sync_test_resources" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/ground_truth/.config.vsh.yaml b/target/docker/control_methods/ground_truth/.config.vsh.yaml index 75d7141c..fddea938 100644 --- a/target/docker/control_methods/ground_truth/.config.vsh.yaml +++ b/target/docker/control_methods/ground_truth/.config.vsh.yaml @@ -424,5 +424,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/ground_truth" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/ground_truth/ground_truth" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/ground_truth/ground_truth b/target/docker/control_methods/ground_truth/ground_truth index 97e0a9b4..95908993 100755 --- a/target/docker/control_methods/ground_truth/ground_truth +++ b/target/docker/control_methods/ground_truth/ground_truth @@ -422,9 +422,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods ground_truth" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/mean_across_celltypes/.config.vsh.yaml b/target/docker/control_methods/mean_across_celltypes/.config.vsh.yaml index 1f8fc0d6..358529b3 100644 --- a/target/docker/control_methods/mean_across_celltypes/.config.vsh.yaml +++ b/target/docker/control_methods/mean_across_celltypes/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_across_celltypes" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_across_celltypes/mean_across_celltypes" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/mean_across_celltypes/mean_across_celltypes b/target/docker/control_methods/mean_across_celltypes/mean_across_celltypes index dbe72a2b..e878ecb9 100755 --- a/target/docker/control_methods/mean_across_celltypes/mean_across_celltypes +++ b/target/docker/control_methods/mean_across_celltypes/mean_across_celltypes @@ -419,9 +419,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods mean_across_celltypes" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:53Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/mean_across_compounds/.config.vsh.yaml b/target/docker/control_methods/mean_across_compounds/.config.vsh.yaml index b0c5dd27..0c9388c3 100644 --- a/target/docker/control_methods/mean_across_compounds/.config.vsh.yaml +++ b/target/docker/control_methods/mean_across_compounds/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_across_compounds" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_across_compounds/mean_across_compounds" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/mean_across_compounds/mean_across_compounds b/target/docker/control_methods/mean_across_compounds/mean_across_compounds index ddae6594..143a0a80 100755 --- a/target/docker/control_methods/mean_across_compounds/mean_across_compounds +++ b/target/docker/control_methods/mean_across_compounds/mean_across_compounds @@ -419,9 +419,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods mean_across_compounds" -LABEL org.opencontainers.image.created="2024-06-06T09:46:38Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/mean_outcome/.config.vsh.yaml b/target/docker/control_methods/mean_outcome/.config.vsh.yaml index 3b18e53b..3d8914ec 100644 --- a/target/docker/control_methods/mean_outcome/.config.vsh.yaml +++ b/target/docker/control_methods/mean_outcome/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_outcome" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/mean_outcome/mean_outcome" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/mean_outcome/mean_outcome b/target/docker/control_methods/mean_outcome/mean_outcome index 06a3b9e6..4e1a11db 100755 --- a/target/docker/control_methods/mean_outcome/mean_outcome +++ b/target/docker/control_methods/mean_outcome/mean_outcome @@ -419,9 +419,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods mean_outcome" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/sample/.config.vsh.yaml b/target/docker/control_methods/sample/.config.vsh.yaml index 033e6a9d..92e21e86 100644 --- a/target/docker/control_methods/sample/.config.vsh.yaml +++ b/target/docker/control_methods/sample/.config.vsh.yaml @@ -423,5 +423,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/sample" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/sample/sample" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/sample/sample b/target/docker/control_methods/sample/sample index 570a0213..019219ac 100755 --- a/target/docker/control_methods/sample/sample +++ b/target/docker/control_methods/sample/sample @@ -422,9 +422,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods sample" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/control_methods/zeros/.config.vsh.yaml b/target/docker/control_methods/zeros/.config.vsh.yaml index c6b64760..3dd0d99e 100644 --- a/target/docker/control_methods/zeros/.config.vsh.yaml +++ b/target/docker/control_methods/zeros/.config.vsh.yaml @@ -417,5 +417,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/zeros" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/control_methods/zeros/zeros" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/control_methods/zeros/zeros b/target/docker/control_methods/zeros/zeros index f91517c5..32bd885e 100755 --- a/target/docker/control_methods/zeros/zeros +++ b/target/docker/control_methods/zeros/zeros @@ -419,9 +419,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component control_methods zeros" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/jn_ap_op2/.config.vsh.yaml b/target/docker/methods/jn_ap_op2/.config.vsh.yaml index 434da6fd..ac67ca67 100644 --- a/target/docker/methods/jn_ap_op2/.config.vsh.yaml +++ b/target/docker/methods/jn_ap_op2/.config.vsh.yaml @@ -345,5 +345,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/jn_ap_op2" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/jn_ap_op2/jn_ap_op2" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/jn_ap_op2/jn_ap_op2 b/target/docker/methods/jn_ap_op2/jn_ap_op2 index c7040853..37a48fc1 100755 --- a/target/docker/methods/jn_ap_op2/jn_ap_op2 +++ b/target/docker/methods/jn_ap_op2/jn_ap_op2 @@ -427,9 +427,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pandas" "category_encoders" LABEL org.opencontainers.image.description="Companion container for running component methods jn_ap_op2" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/lgc_ensemble_direct/.config.vsh.yaml b/target/docker/methods/lgc_ensemble_direct/.config.vsh.yaml index 5f23d0ea..ef8b1988 100644 --- a/target/docker/methods/lgc_ensemble_direct/.config.vsh.yaml +++ b/target/docker/methods/lgc_ensemble_direct/.config.vsh.yaml @@ -400,5 +400,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_direct" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_direct/lgc_ensemble_direct" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/lgc_ensemble_direct/lgc_ensemble_direct b/target/docker/methods/lgc_ensemble_direct/lgc_ensemble_direct index 22f1a063..78f4285b 100755 --- a/target/docker/methods/lgc_ensemble_direct/lgc_ensemble_direct +++ b/target/docker/methods/lgc_ensemble_direct/lgc_ensemble_direct @@ -440,9 +440,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pandas==2.1.3" "pyarrow==14.0.1" "tqdm==4.66.1" "scikit-learn==1.3.2" "transformers==4.35.2" "matplotlib==3.8.2" "torch-summary" LABEL org.opencontainers.image.description="Companion container for running component methods lgc_ensemble_direct" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/lgc_ensemble_predict/.config.vsh.yaml b/target/docker/methods/lgc_ensemble_predict/.config.vsh.yaml index ade69b94..75638705 100644 --- a/target/docker/methods/lgc_ensemble_predict/.config.vsh.yaml +++ b/target/docker/methods/lgc_ensemble_predict/.config.vsh.yaml @@ -142,5 +142,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_predict" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_predict/lgc_ensemble_predict" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/lgc_ensemble_predict/lgc_ensemble_predict b/target/docker/methods/lgc_ensemble_predict/lgc_ensemble_predict index 68093a2f..92cd9a55 100755 --- a/target/docker/methods/lgc_ensemble_predict/lgc_ensemble_predict +++ b/target/docker/methods/lgc_ensemble_predict/lgc_ensemble_predict @@ -414,9 +414,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pandas==2.1.3" "pyarrow==14.0.1" "tqdm==4.66.1" "scikit-learn==1.3.2" "transformers==4.35.2" "matplotlib==3.8.2" "torch-summary" LABEL org.opencontainers.image.description="Companion container for running component methods lgc_ensemble_predict" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/lgc_ensemble_prepare/.config.vsh.yaml b/target/docker/methods/lgc_ensemble_prepare/.config.vsh.yaml index 0ac48420..e1cc1160 100644 --- a/target/docker/methods/lgc_ensemble_prepare/.config.vsh.yaml +++ b/target/docker/methods/lgc_ensemble_prepare/.config.vsh.yaml @@ -193,5 +193,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_prepare" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_prepare/lgc_ensemble_prepare" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/lgc_ensemble_prepare/lgc_ensemble_prepare b/target/docker/methods/lgc_ensemble_prepare/lgc_ensemble_prepare index 38a565b6..a63bc7b0 100755 --- a/target/docker/methods/lgc_ensemble_prepare/lgc_ensemble_prepare +++ b/target/docker/methods/lgc_ensemble_prepare/lgc_ensemble_prepare @@ -433,9 +433,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pandas==2.1.3" "pyarrow==14.0.1" "tqdm==4.66.1" "scikit-learn==1.3.2" "transformers==4.35.2" "matplotlib==3.8.2" "torch-summary" LABEL org.opencontainers.image.description="Companion container for running component methods lgc_ensemble_prepare" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/lgc_ensemble_train/.config.vsh.yaml b/target/docker/methods/lgc_ensemble_train/.config.vsh.yaml index 6ee536ed..be28ed7e 100644 --- a/target/docker/methods/lgc_ensemble_train/.config.vsh.yaml +++ b/target/docker/methods/lgc_ensemble_train/.config.vsh.yaml @@ -169,5 +169,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_train" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/lgc_ensemble_train/lgc_ensemble_train" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/lgc_ensemble_train/lgc_ensemble_train b/target/docker/methods/lgc_ensemble_train/lgc_ensemble_train index 8fe0392b..3d48353e 100755 --- a/target/docker/methods/lgc_ensemble_train/lgc_ensemble_train +++ b/target/docker/methods/lgc_ensemble_train/lgc_ensemble_train @@ -426,9 +426,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pandas==2.1.3" "pyarrow==14.0.1" "tqdm==4.66.1" "scikit-learn==1.3.2" "transformers==4.35.2" "matplotlib==3.8.2" "torch-summary" LABEL org.opencontainers.image.description="Companion container for running component methods lgc_ensemble_train" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml b/target/docker/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml index fcdff8b0..9c85f57e 100644 --- a/target/docker/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml +++ b/target/docker/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml @@ -361,5 +361,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/nn_retraining_with_pseudolabels" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels b/target/docker/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels index c4b9a8c6..2d13cc0b 100755 --- a/target/docker/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels +++ b/target/docker/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels @@ -431,9 +431,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "scikit-learn==1.3.2" "fastparquet" LABEL org.opencontainers.image.description="Companion container for running component methods nn_retraining_with_pseudolabels" -LABEL org.opencontainers.image.created="2024-06-06T09:46:38Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/pyboost/.config.vsh.yaml b/target/docker/methods/pyboost/.config.vsh.yaml index be566295..11dc45a6 100644 --- a/target/docker/methods/pyboost/.config.vsh.yaml +++ b/target/docker/methods/pyboost/.config.vsh.yaml @@ -338,5 +338,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/pyboost" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/pyboost/pyboost" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/pyboost/pyboost b/target/docker/methods/pyboost/pyboost index d2c7fd08..2792e40c 100755 --- a/target/docker/methods/pyboost/pyboost +++ b/target/docker/methods/pyboost/pyboost @@ -426,9 +426,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "colorama" "py-boost==0.4.3" LABEL org.opencontainers.image.description="Companion container for running component methods pyboost" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/scape/.config.vsh.yaml b/target/docker/methods/scape/.config.vsh.yaml index d0ae3210..0f7d35d4 100644 --- a/target/docker/methods/scape/.config.vsh.yaml +++ b/target/docker/methods/scape/.config.vsh.yaml @@ -415,5 +415,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/scape" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/scape/scape" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/scape/scape b/target/docker/methods/scape/scape index cea2f9e1..39cff98f 100755 --- a/target/docker/methods/scape/scape +++ b/target/docker/methods/scape/scape @@ -461,9 +461,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "tensorflow-io-gcs-filesystem>=0.31.0" "scikit-learn~=1.2.2" "fastparquet~=2023.10.1" "git+https://github.com/scapeML/scape.git" LABEL org.opencontainers.image.description="Companion container for running component methods scape" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/methods/transformer_ensemble/.config.vsh.yaml b/target/docker/methods/transformer_ensemble/.config.vsh.yaml index 7af682d8..fe47c536 100644 --- a/target/docker/methods/transformer_ensemble/.config.vsh.yaml +++ b/target/docker/methods/transformer_ensemble/.config.vsh.yaml @@ -374,5 +374,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/transformer_ensemble" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/methods/transformer_ensemble/transformer_ensemble" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/methods/transformer_ensemble/transformer_ensemble b/target/docker/methods/transformer_ensemble/transformer_ensemble index 4cfd8f09..1076870b 100755 --- a/target/docker/methods/transformer_ensemble/transformer_ensemble +++ b/target/docker/methods/transformer_ensemble/transformer_ensemble @@ -439,9 +439,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "pyarrow" "pandas~=2.0.3" "scikit-learn~=1.0.1" "tqdm~=4.66.1" "numpy~=1.23" "matplotlib~=3.5.0" "PyYAML~=6.0.1" "lion-pytorch" LABEL org.opencontainers.image.description="Companion container for running component methods transformer_ensemble" -LABEL org.opencontainers.image.created="2024-06-06T09:46:39Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:52Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/metrics/mean_rowwise_correlation/.config.vsh.yaml b/target/docker/metrics/mean_rowwise_correlation/.config.vsh.yaml index aa4cf945..22d05497 100644 --- a/target/docker/metrics/mean_rowwise_correlation/.config.vsh.yaml +++ b/target/docker/metrics/mean_rowwise_correlation/.config.vsh.yaml @@ -354,5 +354,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/metrics/mean_rowwise_correlation" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/metrics/mean_rowwise_correlation/mean_rowwise_correlation" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/metrics/mean_rowwise_correlation/mean_rowwise_correlation b/target/docker/metrics/mean_rowwise_correlation/mean_rowwise_correlation index 57f5beaf..9319c9fb 100755 --- a/target/docker/metrics/mean_rowwise_correlation/mean_rowwise_correlation +++ b/target/docker/metrics/mean_rowwise_correlation/mean_rowwise_correlation @@ -426,9 +426,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag Rscript -e 'remotes::install_cran(c("proxyC"), repos = "https://cran.rstudio.com")' LABEL org.opencontainers.image.description="Companion container for running component metrics mean_rowwise_correlation" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/metrics/mean_rowwise_error/.config.vsh.yaml b/target/docker/metrics/mean_rowwise_error/.config.vsh.yaml index 8f2d0047..8c574373 100644 --- a/target/docker/metrics/mean_rowwise_error/.config.vsh.yaml +++ b/target/docker/metrics/mean_rowwise_error/.config.vsh.yaml @@ -341,5 +341,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/metrics/mean_rowwise_error" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/metrics/mean_rowwise_error/mean_rowwise_error" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/metrics/mean_rowwise_error/mean_rowwise_error b/target/docker/metrics/mean_rowwise_error/mean_rowwise_error index ea957954..2681f53f 100755 --- a/target/docker/metrics/mean_rowwise_error/mean_rowwise_error +++ b/target/docker/metrics/mean_rowwise_error/mean_rowwise_error @@ -426,9 +426,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag Rscript -e 'remotes::install_cran(c("proxyC"), repos = "https://cran.rstudio.com")' LABEL org.opencontainers.image.description="Companion container for running component metrics mean_rowwise_error" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/add_uns_metadata/.config.vsh.yaml b/target/docker/process_dataset/add_uns_metadata/.config.vsh.yaml index e090ade7..25be46f0 100644 --- a/target/docker/process_dataset/add_uns_metadata/.config.vsh.yaml +++ b/target/docker/process_dataset/add_uns_metadata/.config.vsh.yaml @@ -151,5 +151,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/add_uns_metadata" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/add_uns_metadata/add_uns_metadata" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/add_uns_metadata/add_uns_metadata b/target/docker/process_dataset/add_uns_metadata/add_uns_metadata index 2895e7f5..30152faf 100755 --- a/target/docker/process_dataset/add_uns_metadata/add_uns_metadata +++ b/target/docker/process_dataset/add_uns_metadata/add_uns_metadata @@ -432,9 +432,9 @@ ENTRYPOINT [] RUN : LABEL org.opencontainers.image.description="Companion container for running component process_dataset add_uns_metadata" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/bootstrap/.config.vsh.yaml b/target/docker/process_dataset/bootstrap/.config.vsh.yaml index 2638d04a..7b579fb1 100644 --- a/target/docker/process_dataset/bootstrap/.config.vsh.yaml +++ b/target/docker/process_dataset/bootstrap/.config.vsh.yaml @@ -160,5 +160,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/bootstrap" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/bootstrap/bootstrap" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/bootstrap/bootstrap b/target/docker/process_dataset/bootstrap/bootstrap index 386f68b7..60df4811 100755 --- a/target/docker/process_dataset/bootstrap/bootstrap +++ b/target/docker/process_dataset/bootstrap/bootstrap @@ -439,9 +439,9 @@ ENTRYPOINT [] RUN : LABEL org.opencontainers.image.description="Companion container for running component process_dataset bootstrap" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/compute_pseudobulk/.config.vsh.yaml b/target/docker/process_dataset/compute_pseudobulk/.config.vsh.yaml index f4b3dfa0..57163497 100644 --- a/target/docker/process_dataset/compute_pseudobulk/.config.vsh.yaml +++ b/target/docker/process_dataset/compute_pseudobulk/.config.vsh.yaml @@ -93,5 +93,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/compute_pseudobulk" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/compute_pseudobulk/compute_pseudobulk" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/compute_pseudobulk/compute_pseudobulk b/target/docker/process_dataset/compute_pseudobulk/compute_pseudobulk index 12d1483f..8fe159e9 100755 --- a/target/docker/process_dataset/compute_pseudobulk/compute_pseudobulk +++ b/target/docker/process_dataset/compute_pseudobulk/compute_pseudobulk @@ -406,9 +406,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "pyarrow" LABEL org.opencontainers.image.description="Companion container for running component process_dataset compute_pseudobulk" -LABEL org.opencontainers.image.created="2024-06-06T09:46:41Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml b/target/docker/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml index 89c65971..c4db40dd 100644 --- a/target/docker/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml +++ b/target/docker/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml @@ -133,5 +133,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/convert_h5ad_to_parquet" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet b/target/docker/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet index efcbedbc..2a70b387 100755 --- a/target/docker/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet +++ b/target/docker/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet @@ -418,9 +418,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "anndata" "pandas" LABEL org.opencontainers.image.description="Companion container for running component process_dataset convert_h5ad_to_parquet" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml b/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml index 4447ff01..18896cb4 100644 --- a/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml +++ b/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml @@ -213,5 +213,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet b/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet index ee06e072..426a56a3 100755 --- a/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet +++ b/target/docker/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet @@ -452,9 +452,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "fastparquet" "anndata" "pandas" LABEL org.opencontainers.image.description="Companion container for running component process_dataset convert_kaggle_h5ad_to_parquet" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/filter_obs/.config.vsh.yaml b/target/docker/process_dataset/filter_obs/.config.vsh.yaml index cf6d17ce..b611a9e5 100644 --- a/target/docker/process_dataset/filter_obs/.config.vsh.yaml +++ b/target/docker/process_dataset/filter_obs/.config.vsh.yaml @@ -95,5 +95,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/filter_obs" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/filter_obs/filter_obs" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/filter_obs/filter_obs b/target/docker/process_dataset/filter_obs/filter_obs index 9e97292c..eddc2732 100755 --- a/target/docker/process_dataset/filter_obs/filter_obs +++ b/target/docker/process_dataset/filter_obs/filter_obs @@ -406,9 +406,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag Rscript -e 'remotes::install_cran(c("dplyr", "tidyr", "purrr", "tibble"), repos = "https://cran.rstudio.com")' LABEL org.opencontainers.image.description="Companion container for running component process_dataset filter_obs" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/filter_vars/.config.vsh.yaml b/target/docker/process_dataset/filter_vars/.config.vsh.yaml index a3cc0d8c..09237dfe 100644 --- a/target/docker/process_dataset/filter_vars/.config.vsh.yaml +++ b/target/docker/process_dataset/filter_vars/.config.vsh.yaml @@ -97,5 +97,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/filter_vars" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/filter_vars/filter_vars" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/filter_vars/filter_vars b/target/docker/process_dataset/filter_vars/filter_vars index 3cb9d950..3bc4da0b 100755 --- a/target/docker/process_dataset/filter_vars/filter_vars +++ b/target/docker/process_dataset/filter_vars/filter_vars @@ -406,9 +406,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag Rscript -e 'remotes::install_cran(c("edgeR", "limma", "dplyr", "tidyr", "purrr", "tibble"), repos = "https://cran.rstudio.com")' LABEL org.opencontainers.image.description="Companion container for running component process_dataset filter_vars" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/generate_id_map/.config.vsh.yaml b/target/docker/process_dataset/generate_id_map/.config.vsh.yaml index 9fb0a885..5e8dc488 100644 --- a/target/docker/process_dataset/generate_id_map/.config.vsh.yaml +++ b/target/docker/process_dataset/generate_id_map/.config.vsh.yaml @@ -93,5 +93,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/generate_id_map" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/generate_id_map/generate_id_map" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/generate_id_map/generate_id_map b/target/docker/process_dataset/generate_id_map/generate_id_map index 954d4fd9..e81beb5c 100755 --- a/target/docker/process_dataset/generate_id_map/generate_id_map +++ b/target/docker/process_dataset/generate_id_map/generate_id_map @@ -406,9 +406,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "anndata" LABEL org.opencontainers.image.description="Companion container for running component process_dataset generate_id_map" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:50Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/docker/process_dataset/run_limma/.config.vsh.yaml b/target/docker/process_dataset/run_limma/.config.vsh.yaml index b5cf1e52..2c219a6c 100644 --- a/target/docker/process_dataset/run_limma/.config.vsh.yaml +++ b/target/docker/process_dataset/run_limma/.config.vsh.yaml @@ -153,5 +153,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/run_limma" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/docker/process_dataset/run_limma/run_limma" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/docker/process_dataset/run_limma/run_limma b/target/docker/process_dataset/run_limma/run_limma index 8c944600..2c7c7117 100755 --- a/target/docker/process_dataset/run_limma/run_limma +++ b/target/docker/process_dataset/run_limma/run_limma @@ -435,9 +435,9 @@ RUN Rscript -e 'if (!requireNamespace("BiocManager", quietly = TRUE)) install.pa Rscript -e 'if (!requireNamespace("future", quietly = TRUE)) BiocManager::install("future")' LABEL org.opencontainers.image.description="Companion container for running component process_dataset run_limma" -LABEL org.opencontainers.image.created="2024-06-06T09:46:40Z" +LABEL org.opencontainers.image.created="2024-06-06T14:51:51Z" LABEL org.opencontainers.image.source="https://github.com/openproblems-bio/task_perturbation_prediction" -LABEL org.opencontainers.image.revision="33a27528c858187bbea4118dc8960ca6889f3bb8" +LABEL org.opencontainers.image.revision="a623d3ad92e82dc099ecaf024de153237d275931" LABEL org.opencontainers.image.version="1.0.0" VIASHDOCKER diff --git a/target/native/common/create_component/.config.vsh.yaml b/target/native/common/create_component/.config.vsh.yaml index 5aab2279..ebe52e28 100644 --- a/target/native/common/create_component/.config.vsh.yaml +++ b/target/native/common/create_component/.config.vsh.yaml @@ -134,5 +134,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/common/create_component" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/common/create_component/create_component" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/common/sync_test_resources/.config.vsh.yaml b/target/native/common/sync_test_resources/.config.vsh.yaml index ed187ef6..2b4fc3b3 100644 --- a/target/native/common/sync_test_resources/.config.vsh.yaml +++ b/target/native/common/sync_test_resources/.config.vsh.yaml @@ -117,5 +117,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/common/sync_test_resources" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/common/sync_test_resources/sync_test_resources" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/jn_ap_op2/.config.vsh.yaml b/target/native/methods/jn_ap_op2/.config.vsh.yaml index 3c226b8e..345fe233 100644 --- a/target/native/methods/jn_ap_op2/.config.vsh.yaml +++ b/target/native/methods/jn_ap_op2/.config.vsh.yaml @@ -345,5 +345,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/jn_ap_op2" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/jn_ap_op2/jn_ap_op2" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/lgc_ensemble_direct/.config.vsh.yaml b/target/native/methods/lgc_ensemble_direct/.config.vsh.yaml index c941856d..1c1664d4 100644 --- a/target/native/methods/lgc_ensemble_direct/.config.vsh.yaml +++ b/target/native/methods/lgc_ensemble_direct/.config.vsh.yaml @@ -400,5 +400,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_direct" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_direct/lgc_ensemble_direct" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/lgc_ensemble_predict/.config.vsh.yaml b/target/native/methods/lgc_ensemble_predict/.config.vsh.yaml index 9b205eee..d03d8aca 100644 --- a/target/native/methods/lgc_ensemble_predict/.config.vsh.yaml +++ b/target/native/methods/lgc_ensemble_predict/.config.vsh.yaml @@ -142,5 +142,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_predict" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_predict/lgc_ensemble_predict" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/lgc_ensemble_prepare/.config.vsh.yaml b/target/native/methods/lgc_ensemble_prepare/.config.vsh.yaml index 161667b7..4a795f7c 100644 --- a/target/native/methods/lgc_ensemble_prepare/.config.vsh.yaml +++ b/target/native/methods/lgc_ensemble_prepare/.config.vsh.yaml @@ -193,5 +193,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_prepare" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_prepare/lgc_ensemble_prepare" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/lgc_ensemble_train/.config.vsh.yaml b/target/native/methods/lgc_ensemble_train/.config.vsh.yaml index b7b9e7f4..dc38615c 100644 --- a/target/native/methods/lgc_ensemble_train/.config.vsh.yaml +++ b/target/native/methods/lgc_ensemble_train/.config.vsh.yaml @@ -169,5 +169,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_train" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/lgc_ensemble_train/lgc_ensemble_train" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml b/target/native/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml index c9c6eb16..0b4f98b9 100644 --- a/target/native/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml +++ b/target/native/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml @@ -361,5 +361,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/nn_retraining_with_pseudolabels" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/native/methods/pyboost/.config.vsh.yaml b/target/native/methods/pyboost/.config.vsh.yaml index d60b09d7..48ba50e4 100644 --- a/target/native/methods/pyboost/.config.vsh.yaml +++ b/target/native/methods/pyboost/.config.vsh.yaml @@ -338,5 +338,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/pyboost" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/native/methods/pyboost/pyboost" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/common/create_component/.config.vsh.yaml b/target/nextflow/common/create_component/.config.vsh.yaml index afeeee19..4e8937db 100644 --- a/target/nextflow/common/create_component/.config.vsh.yaml +++ b/target/nextflow/common/create_component/.config.vsh.yaml @@ -134,5 +134,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/create_component" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/create_component/create_component" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/common/create_component/main.nf b/target/nextflow/common/create_component/main.nf index 081f5c82..b82765d4 100644 --- a/target/nextflow/common/create_component/main.nf +++ b/target/nextflow/common/create_component/main.nf @@ -2942,7 +2942,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/create_component", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/common/sync_test_resources/.config.vsh.yaml b/target/nextflow/common/sync_test_resources/.config.vsh.yaml index 45498309..03cfec75 100644 --- a/target/nextflow/common/sync_test_resources/.config.vsh.yaml +++ b/target/nextflow/common/sync_test_resources/.config.vsh.yaml @@ -117,5 +117,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/sync_test_resources" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/sync_test_resources/sync_test_resources" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/common/sync_test_resources/main.nf b/target/nextflow/common/sync_test_resources/main.nf index 73ec9c0a..18da566a 100644 --- a/target/nextflow/common/sync_test_resources/main.nf +++ b/target/nextflow/common/sync_test_resources/main.nf @@ -2918,7 +2918,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/common/sync_test_resources", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/ground_truth/.config.vsh.yaml b/target/nextflow/control_methods/ground_truth/.config.vsh.yaml index 0d0ea293..44a4fb75 100644 --- a/target/nextflow/control_methods/ground_truth/.config.vsh.yaml +++ b/target/nextflow/control_methods/ground_truth/.config.vsh.yaml @@ -424,5 +424,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/ground_truth" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/ground_truth/ground_truth" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/ground_truth/main.nf b/target/nextflow/control_methods/ground_truth/main.nf index 6aef0617..20c05351 100644 --- a/target/nextflow/control_methods/ground_truth/main.nf +++ b/target/nextflow/control_methods/ground_truth/main.nf @@ -3337,7 +3337,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/ground_truth", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/mean_across_celltypes/.config.vsh.yaml b/target/nextflow/control_methods/mean_across_celltypes/.config.vsh.yaml index f9bc57f7..e16949d0 100644 --- a/target/nextflow/control_methods/mean_across_celltypes/.config.vsh.yaml +++ b/target/nextflow/control_methods/mean_across_celltypes/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_celltypes" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_celltypes/mean_across_celltypes" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/mean_across_celltypes/main.nf b/target/nextflow/control_methods/mean_across_celltypes/main.nf index 517636a1..61400498 100644 --- a/target/nextflow/control_methods/mean_across_celltypes/main.nf +++ b/target/nextflow/control_methods/mean_across_celltypes/main.nf @@ -3333,7 +3333,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_celltypes", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/mean_across_compounds/.config.vsh.yaml b/target/nextflow/control_methods/mean_across_compounds/.config.vsh.yaml index e5ea0abf..debae9dc 100644 --- a/target/nextflow/control_methods/mean_across_compounds/.config.vsh.yaml +++ b/target/nextflow/control_methods/mean_across_compounds/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_compounds" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_compounds/mean_across_compounds" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/mean_across_compounds/main.nf b/target/nextflow/control_methods/mean_across_compounds/main.nf index 7e83378d..b41c518c 100644 --- a/target/nextflow/control_methods/mean_across_compounds/main.nf +++ b/target/nextflow/control_methods/mean_across_compounds/main.nf @@ -3333,7 +3333,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_compounds", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/mean_outcome/.config.vsh.yaml b/target/nextflow/control_methods/mean_outcome/.config.vsh.yaml index 9db91681..6381a6c2 100644 --- a/target/nextflow/control_methods/mean_outcome/.config.vsh.yaml +++ b/target/nextflow/control_methods/mean_outcome/.config.vsh.yaml @@ -420,5 +420,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_outcome" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_outcome/mean_outcome" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/mean_outcome/main.nf b/target/nextflow/control_methods/mean_outcome/main.nf index b4b52ed5..5e8bab2b 100644 --- a/target/nextflow/control_methods/mean_outcome/main.nf +++ b/target/nextflow/control_methods/mean_outcome/main.nf @@ -3333,7 +3333,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_outcome", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/sample/.config.vsh.yaml b/target/nextflow/control_methods/sample/.config.vsh.yaml index e8841c42..165bef8e 100644 --- a/target/nextflow/control_methods/sample/.config.vsh.yaml +++ b/target/nextflow/control_methods/sample/.config.vsh.yaml @@ -423,5 +423,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/sample" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/sample/sample" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/sample/main.nf b/target/nextflow/control_methods/sample/main.nf index b1489fe4..b1c4cbde 100644 --- a/target/nextflow/control_methods/sample/main.nf +++ b/target/nextflow/control_methods/sample/main.nf @@ -3337,7 +3337,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/sample", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/control_methods/zeros/.config.vsh.yaml b/target/nextflow/control_methods/zeros/.config.vsh.yaml index 37983442..d37cfc79 100644 --- a/target/nextflow/control_methods/zeros/.config.vsh.yaml +++ b/target/nextflow/control_methods/zeros/.config.vsh.yaml @@ -417,5 +417,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/zeros" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/zeros/zeros" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/control_methods/zeros/main.nf b/target/nextflow/control_methods/zeros/main.nf index 834b8047..fa568937 100644 --- a/target/nextflow/control_methods/zeros/main.nf +++ b/target/nextflow/control_methods/zeros/main.nf @@ -3328,7 +3328,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/zeros", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/jn_ap_op2/.config.vsh.yaml b/target/nextflow/methods/jn_ap_op2/.config.vsh.yaml index 4eeff7c3..cebfc1ae 100644 --- a/target/nextflow/methods/jn_ap_op2/.config.vsh.yaml +++ b/target/nextflow/methods/jn_ap_op2/.config.vsh.yaml @@ -345,5 +345,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/jn_ap_op2" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/jn_ap_op2/jn_ap_op2" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/jn_ap_op2/main.nf b/target/nextflow/methods/jn_ap_op2/main.nf index 0aac27a2..3c36f8c0 100644 --- a/target/nextflow/methods/jn_ap_op2/main.nf +++ b/target/nextflow/methods/jn_ap_op2/main.nf @@ -3222,7 +3222,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/jn_ap_op2", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/lgc_ensemble/.config.vsh.yaml b/target/nextflow/methods/lgc_ensemble/.config.vsh.yaml index a9a476e9..fb1935e0 100644 --- a/target/nextflow/methods/lgc_ensemble/.config.vsh.yaml +++ b/target/nextflow/methods/lgc_ensemble/.config.vsh.yaml @@ -318,7 +318,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/lgc_ensemble_prepare/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_prepare" - name: "methods/lgc_ensemble_train" @@ -335,7 +335,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/lgc_ensemble_train/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_train" - name: "methods/lgc_ensemble_predict" @@ -352,7 +352,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/lgc_ensemble_predict/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_predict" set_wd_to_resources_dir: false @@ -388,5 +388,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble/main.nf" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/lgc_ensemble/main.nf b/target/nextflow/methods/lgc_ensemble/main.nf index 88cc813e..cfca8e44 100644 --- a/target/nextflow/methods/lgc_ensemble/main.nf +++ b/target/nextflow/methods/lgc_ensemble/main.nf @@ -3185,7 +3185,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/lgc_ensemble_prepare/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_prepare" @@ -3206,7 +3206,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/lgc_ensemble_train/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_train" @@ -3227,7 +3227,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/lgc_ensemble_predict/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_predict" @@ -3274,7 +3274,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/lgc_ensemble_direct/.config.vsh.yaml b/target/nextflow/methods/lgc_ensemble_direct/.config.vsh.yaml index 4335745c..6698c0b9 100644 --- a/target/nextflow/methods/lgc_ensemble_direct/.config.vsh.yaml +++ b/target/nextflow/methods/lgc_ensemble_direct/.config.vsh.yaml @@ -400,5 +400,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_direct" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_direct/lgc_ensemble_direct" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/lgc_ensemble_direct/main.nf b/target/nextflow/methods/lgc_ensemble_direct/main.nf index e33aa06f..0fe0ee20 100644 --- a/target/nextflow/methods/lgc_ensemble_direct/main.nf +++ b/target/nextflow/methods/lgc_ensemble_direct/main.nf @@ -3315,7 +3315,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_direct", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/lgc_ensemble_predict/.config.vsh.yaml b/target/nextflow/methods/lgc_ensemble_predict/.config.vsh.yaml index e0628b23..ee62ac9e 100644 --- a/target/nextflow/methods/lgc_ensemble_predict/.config.vsh.yaml +++ b/target/nextflow/methods/lgc_ensemble_predict/.config.vsh.yaml @@ -142,5 +142,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_predict" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_predict/lgc_ensemble_predict" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/lgc_ensemble_predict/main.nf b/target/nextflow/methods/lgc_ensemble_predict/main.nf index 1ca865ec..c2777212 100644 --- a/target/nextflow/methods/lgc_ensemble_predict/main.nf +++ b/target/nextflow/methods/lgc_ensemble_predict/main.nf @@ -2975,7 +2975,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_predict", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/lgc_ensemble_prepare/.config.vsh.yaml b/target/nextflow/methods/lgc_ensemble_prepare/.config.vsh.yaml index 1367fa53..f3910f5f 100644 --- a/target/nextflow/methods/lgc_ensemble_prepare/.config.vsh.yaml +++ b/target/nextflow/methods/lgc_ensemble_prepare/.config.vsh.yaml @@ -193,5 +193,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_prepare" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_prepare/lgc_ensemble_prepare" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/lgc_ensemble_prepare/main.nf b/target/nextflow/methods/lgc_ensemble_prepare/main.nf index 6ee025f3..c5905d1e 100644 --- a/target/nextflow/methods/lgc_ensemble_prepare/main.nf +++ b/target/nextflow/methods/lgc_ensemble_prepare/main.nf @@ -3044,7 +3044,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_prepare", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/lgc_ensemble_train/.config.vsh.yaml b/target/nextflow/methods/lgc_ensemble_train/.config.vsh.yaml index 2cd10a67..89c33c0f 100644 --- a/target/nextflow/methods/lgc_ensemble_train/.config.vsh.yaml +++ b/target/nextflow/methods/lgc_ensemble_train/.config.vsh.yaml @@ -169,5 +169,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_train" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_train/lgc_ensemble_train" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/lgc_ensemble_train/main.nf b/target/nextflow/methods/lgc_ensemble_train/main.nf index a0e0f301..dd716b8a 100644 --- a/target/nextflow/methods/lgc_ensemble_train/main.nf +++ b/target/nextflow/methods/lgc_ensemble_train/main.nf @@ -3007,7 +3007,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble_train", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml b/target/nextflow/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml index bed5655e..8766f9d5 100644 --- a/target/nextflow/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml +++ b/target/nextflow/methods/nn_retraining_with_pseudolabels/.config.vsh.yaml @@ -361,5 +361,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/nn_retraining_with_pseudolabels" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/nn_retraining_with_pseudolabels/nn_retraining_with_pseudolabels" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/nn_retraining_with_pseudolabels/main.nf b/target/nextflow/methods/nn_retraining_with_pseudolabels/main.nf index 5d3fc1be..48f2a2fd 100644 --- a/target/nextflow/methods/nn_retraining_with_pseudolabels/main.nf +++ b/target/nextflow/methods/nn_retraining_with_pseudolabels/main.nf @@ -3234,7 +3234,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/nn_retraining_with_pseudolabels", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/pyboost/.config.vsh.yaml b/target/nextflow/methods/pyboost/.config.vsh.yaml index 29bd3e64..22213268 100644 --- a/target/nextflow/methods/pyboost/.config.vsh.yaml +++ b/target/nextflow/methods/pyboost/.config.vsh.yaml @@ -338,5 +338,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/pyboost" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/pyboost/pyboost" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/pyboost/main.nf b/target/nextflow/methods/pyboost/main.nf index 5c503236..d0f24de0 100644 --- a/target/nextflow/methods/pyboost/main.nf +++ b/target/nextflow/methods/pyboost/main.nf @@ -3217,7 +3217,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/pyboost", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/scape/.config.vsh.yaml b/target/nextflow/methods/scape/.config.vsh.yaml index 269e087b..fc5e5a0d 100644 --- a/target/nextflow/methods/scape/.config.vsh.yaml +++ b/target/nextflow/methods/scape/.config.vsh.yaml @@ -415,5 +415,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/scape" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/scape/scape" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/scape/main.nf b/target/nextflow/methods/scape/main.nf index 130777a3..857e4952 100644 --- a/target/nextflow/methods/scape/main.nf +++ b/target/nextflow/methods/scape/main.nf @@ -3308,7 +3308,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/scape", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/methods/transformer_ensemble/.config.vsh.yaml b/target/nextflow/methods/transformer_ensemble/.config.vsh.yaml index 62234775..37f509c3 100644 --- a/target/nextflow/methods/transformer_ensemble/.config.vsh.yaml +++ b/target/nextflow/methods/transformer_ensemble/.config.vsh.yaml @@ -374,5 +374,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/transformer_ensemble" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/transformer_ensemble/transformer_ensemble" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/methods/transformer_ensemble/main.nf b/target/nextflow/methods/transformer_ensemble/main.nf index 9440667d..8f2fa071 100644 --- a/target/nextflow/methods/transformer_ensemble/main.nf +++ b/target/nextflow/methods/transformer_ensemble/main.nf @@ -3256,7 +3256,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/transformer_ensemble", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/metrics/mean_rowwise_correlation/.config.vsh.yaml b/target/nextflow/metrics/mean_rowwise_correlation/.config.vsh.yaml index 6b0b10a8..79c81193 100644 --- a/target/nextflow/metrics/mean_rowwise_correlation/.config.vsh.yaml +++ b/target/nextflow/metrics/mean_rowwise_correlation/.config.vsh.yaml @@ -354,5 +354,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_correlation" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_correlation/mean_rowwise_correlation" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/metrics/mean_rowwise_correlation/main.nf b/target/nextflow/metrics/mean_rowwise_correlation/main.nf index 9479b746..cd5e91ab 100644 --- a/target/nextflow/metrics/mean_rowwise_correlation/main.nf +++ b/target/nextflow/metrics/mean_rowwise_correlation/main.nf @@ -3220,7 +3220,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_correlation", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/metrics/mean_rowwise_error/.config.vsh.yaml b/target/nextflow/metrics/mean_rowwise_error/.config.vsh.yaml index 2b4ed11d..15196537 100644 --- a/target/nextflow/metrics/mean_rowwise_error/.config.vsh.yaml +++ b/target/nextflow/metrics/mean_rowwise_error/.config.vsh.yaml @@ -341,5 +341,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_error" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_error/mean_rowwise_error" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/metrics/mean_rowwise_error/main.nf b/target/nextflow/metrics/mean_rowwise_error/main.nf index 203f9bb0..7c158e5d 100644 --- a/target/nextflow/metrics/mean_rowwise_error/main.nf +++ b/target/nextflow/metrics/mean_rowwise_error/main.nf @@ -3211,7 +3211,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_error", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/add_uns_metadata/.config.vsh.yaml b/target/nextflow/process_dataset/add_uns_metadata/.config.vsh.yaml index cef72c71..c0c8c78f 100644 --- a/target/nextflow/process_dataset/add_uns_metadata/.config.vsh.yaml +++ b/target/nextflow/process_dataset/add_uns_metadata/.config.vsh.yaml @@ -151,5 +151,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/add_uns_metadata" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/add_uns_metadata/add_uns_metadata" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/add_uns_metadata/main.nf b/target/nextflow/process_dataset/add_uns_metadata/main.nf index cebe934c..f8e0c46e 100644 --- a/target/nextflow/process_dataset/add_uns_metadata/main.nf +++ b/target/nextflow/process_dataset/add_uns_metadata/main.nf @@ -2958,7 +2958,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/add_uns_metadata", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/bootstrap/.config.vsh.yaml b/target/nextflow/process_dataset/bootstrap/.config.vsh.yaml index b8259898..3c47e82a 100644 --- a/target/nextflow/process_dataset/bootstrap/.config.vsh.yaml +++ b/target/nextflow/process_dataset/bootstrap/.config.vsh.yaml @@ -160,5 +160,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/bootstrap" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/bootstrap/bootstrap" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/bootstrap/main.nf b/target/nextflow/process_dataset/bootstrap/main.nf index d86cc35e..547d93c2 100644 --- a/target/nextflow/process_dataset/bootstrap/main.nf +++ b/target/nextflow/process_dataset/bootstrap/main.nf @@ -2982,7 +2982,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/bootstrap", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/compute_pseudobulk/.config.vsh.yaml b/target/nextflow/process_dataset/compute_pseudobulk/.config.vsh.yaml index 15fd434e..ac66ecea 100644 --- a/target/nextflow/process_dataset/compute_pseudobulk/.config.vsh.yaml +++ b/target/nextflow/process_dataset/compute_pseudobulk/.config.vsh.yaml @@ -93,5 +93,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/compute_pseudobulk" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/compute_pseudobulk/compute_pseudobulk" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/compute_pseudobulk/main.nf b/target/nextflow/process_dataset/compute_pseudobulk/main.nf index 8d7569aa..7c64a28d 100644 --- a/target/nextflow/process_dataset/compute_pseudobulk/main.nf +++ b/target/nextflow/process_dataset/compute_pseudobulk/main.nf @@ -2898,7 +2898,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/compute_pseudobulk", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml b/target/nextflow/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml index af4fc236..a57eb0b5 100644 --- a/target/nextflow/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml +++ b/target/nextflow/process_dataset/convert_h5ad_to_parquet/.config.vsh.yaml @@ -133,5 +133,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_h5ad_to_parquet" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_h5ad_to_parquet/convert_h5ad_to_parquet" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/convert_h5ad_to_parquet/main.nf b/target/nextflow/process_dataset/convert_h5ad_to_parquet/main.nf index 0d3ba929..4d8775b2 100644 --- a/target/nextflow/process_dataset/convert_h5ad_to_parquet/main.nf +++ b/target/nextflow/process_dataset/convert_h5ad_to_parquet/main.nf @@ -2947,7 +2947,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_h5ad_to_parquet", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml b/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml index 79725ed0..e75c0c58 100644 --- a/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml +++ b/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/.config.vsh.yaml @@ -213,5 +213,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/convert_kaggle_h5ad_to_parquet" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/main.nf b/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/main.nf index a13bff55..0e522ab9 100644 --- a/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/main.nf +++ b/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet/main.nf @@ -3041,7 +3041,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/convert_kaggle_h5ad_to_parquet", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/filter_obs/.config.vsh.yaml b/target/nextflow/process_dataset/filter_obs/.config.vsh.yaml index 5f694bfa..64f41e95 100644 --- a/target/nextflow/process_dataset/filter_obs/.config.vsh.yaml +++ b/target/nextflow/process_dataset/filter_obs/.config.vsh.yaml @@ -95,5 +95,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_obs" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_obs/filter_obs" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/filter_obs/main.nf b/target/nextflow/process_dataset/filter_obs/main.nf index cb8328b9..b8984626 100644 --- a/target/nextflow/process_dataset/filter_obs/main.nf +++ b/target/nextflow/process_dataset/filter_obs/main.nf @@ -2900,7 +2900,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_obs", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/filter_vars/.config.vsh.yaml b/target/nextflow/process_dataset/filter_vars/.config.vsh.yaml index 1e1a9a3f..284267de 100644 --- a/target/nextflow/process_dataset/filter_vars/.config.vsh.yaml +++ b/target/nextflow/process_dataset/filter_vars/.config.vsh.yaml @@ -97,5 +97,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_vars" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_vars/filter_vars" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/filter_vars/main.nf b/target/nextflow/process_dataset/filter_vars/main.nf index fc4cb780..252c5a00 100644 --- a/target/nextflow/process_dataset/filter_vars/main.nf +++ b/target/nextflow/process_dataset/filter_vars/main.nf @@ -2902,7 +2902,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_vars", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/generate_id_map/.config.vsh.yaml b/target/nextflow/process_dataset/generate_id_map/.config.vsh.yaml index 89b8560c..0119ceb5 100644 --- a/target/nextflow/process_dataset/generate_id_map/.config.vsh.yaml +++ b/target/nextflow/process_dataset/generate_id_map/.config.vsh.yaml @@ -93,5 +93,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/generate_id_map" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/generate_id_map/generate_id_map" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/generate_id_map/main.nf b/target/nextflow/process_dataset/generate_id_map/main.nf index bacd4239..54c9a60d 100644 --- a/target/nextflow/process_dataset/generate_id_map/main.nf +++ b/target/nextflow/process_dataset/generate_id_map/main.nf @@ -2898,7 +2898,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/generate_id_map", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/process_dataset/run_limma/.config.vsh.yaml b/target/nextflow/process_dataset/run_limma/.config.vsh.yaml index 17687c3d..f76162ae 100644 --- a/target/nextflow/process_dataset/run_limma/.config.vsh.yaml +++ b/target/nextflow/process_dataset/run_limma/.config.vsh.yaml @@ -153,5 +153,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/run_limma" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/run_limma/run_limma" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/process_dataset/run_limma/main.nf b/target/nextflow/process_dataset/run_limma/main.nf index 3d62cc2d..830b4257 100644 --- a/target/nextflow/process_dataset/run_limma/main.nf +++ b/target/nextflow/process_dataset/run_limma/main.nf @@ -2967,7 +2967,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/run_limma", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/workflows/process_dataset/.config.vsh.yaml b/target/nextflow/workflows/process_dataset/.config.vsh.yaml index 6a2d8642..84059b62 100644 --- a/target/nextflow/workflows/process_dataset/.config.vsh.yaml +++ b/target/nextflow/workflows/process_dataset/.config.vsh.yaml @@ -488,7 +488,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/compute_pseudobulk/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/compute_pseudobulk" - name: "process_dataset/filter_obs" @@ -505,7 +505,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/filter_obs/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_obs" - name: "process_dataset/filter_vars" @@ -522,7 +522,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/filter_vars/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_vars" - name: "process_dataset/add_uns_metadata" @@ -539,7 +539,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/add_uns_metadata/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/add_uns_metadata" - name: "process_dataset/run_limma" @@ -556,7 +556,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/run_limma/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/run_limma" - name: "process_dataset/generate_id_map" @@ -573,7 +573,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/generate_id_map/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/generate_id_map" set_wd_to_resources_dir: false @@ -613,5 +613,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/process_dataset" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/process_dataset/main.nf" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/workflows/process_dataset/main.nf b/target/nextflow/workflows/process_dataset/main.nf index e64c3c1f..36671884 100644 --- a/target/nextflow/workflows/process_dataset/main.nf +++ b/target/nextflow/workflows/process_dataset/main.nf @@ -3425,7 +3425,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/compute_pseudobulk/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/compute_pseudobulk" @@ -3446,7 +3446,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/filter_obs/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_obs" @@ -3467,7 +3467,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/filter_vars/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/filter_vars" @@ -3488,7 +3488,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/add_uns_metadata/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/add_uns_metadata" @@ -3509,7 +3509,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/run_limma/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/run_limma" @@ -3530,7 +3530,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/generate_id_map/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/generate_id_map" @@ -3582,7 +3582,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/process_dataset", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/workflows/run_benchmark/.config.vsh.yaml b/target/nextflow/workflows/run_benchmark/.config.vsh.yaml index 53f78074..9be93abe 100644 --- a/target/nextflow/workflows/run_benchmark/.config.vsh.yaml +++ b/target/nextflow/workflows/run_benchmark/.config.vsh.yaml @@ -411,8 +411,8 @@ functionality: name: "" repo: "openproblems-bio/openproblems-v2" tag: "main_build" - localPath: "/tmp/viash_hub_repo13555289637572668798" - foundConfigPath: "/tmp/viash_hub_repo13555289637572668798/target/nextflow/common/extract_metadata/.config.vsh.yaml" + localPath: "/tmp/viash_hub_repo17569978015704923011" + foundConfigPath: "/tmp/viash_hub_repo17569978015704923011/target/nextflow/common/extract_metadata/.config.vsh.yaml" configInfo: functionalityName: "extract_metadata" git_remote: "https://github.com/openproblems-bio/openproblems-v2" @@ -438,7 +438,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/zeros/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/zeros" - name: "control_methods/sample" @@ -455,7 +455,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/sample/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/sample" - name: "control_methods/ground_truth" @@ -472,7 +472,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/ground_truth/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/ground_truth" - name: "control_methods/mean_outcome" @@ -489,7 +489,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/mean_outcome/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_outcome" - name: "control_methods/mean_across_celltypes" @@ -506,7 +506,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/mean_across_celltypes/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_celltypes" - name: "control_methods/mean_across_compounds" @@ -523,7 +523,7 @@ functionality: functionalityNamespace: "control_methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/control_methods/mean_across_compounds/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_compounds" - name: "methods/nn_retraining_with_pseudolabels" @@ -540,7 +540,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/nn_retraining_with_pseudolabels/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/nn_retraining_with_pseudolabels" - name: "methods/scape" @@ -557,7 +557,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/scape/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/scape" - name: "methods/jn_ap_op2" @@ -574,7 +574,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/jn_ap_op2/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/jn_ap_op2" - name: "methods/lgc_ensemble" @@ -591,7 +591,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/lgc_ensemble/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble" - name: "methods/transformer_ensemble" @@ -608,7 +608,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/transformer_ensemble/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/transformer_ensemble" - name: "methods/pyboost" @@ -625,7 +625,7 @@ functionality: functionalityNamespace: "methods" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/methods/pyboost/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/pyboost" - name: "metrics/mean_rowwise_error" @@ -642,7 +642,7 @@ functionality: functionalityNamespace: "metrics" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/metrics/mean_rowwise_error/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_error" - name: "metrics/mean_rowwise_correlation" @@ -659,7 +659,7 @@ functionality: functionalityNamespace: "metrics" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/metrics/mean_rowwise_correlation/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_correlation" repositories: @@ -701,5 +701,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_benchmark" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_benchmark/main.nf" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/workflows/run_benchmark/main.nf b/target/nextflow/workflows/run_benchmark/main.nf index 1b289afe..a232149e 100644 --- a/target/nextflow/workflows/run_benchmark/main.nf +++ b/target/nextflow/workflows/run_benchmark/main.nf @@ -3312,9 +3312,9 @@ meta = [ "name" : "", "repo" : "openproblems-bio/openproblems-v2", "tag" : "main_build", - "localPath" : "/tmp/viash_hub_repo13555289637572668798" + "localPath" : "/tmp/viash_hub_repo17569978015704923011" }, - "foundConfigPath" : "/tmp/viash_hub_repo13555289637572668798/target/nextflow/common/extract_metadata/.config.vsh.yaml", + "foundConfigPath" : "/tmp/viash_hub_repo17569978015704923011/target/nextflow/common/extract_metadata/.config.vsh.yaml", "configInfo" : { "functionalityName" : "extract_metadata", "git_remote" : "https://github.com/openproblems-bio/openproblems-v2", @@ -3344,7 +3344,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/zeros/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/zeros" @@ -3365,7 +3365,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/sample/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/sample" @@ -3386,7 +3386,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/ground_truth/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/ground_truth" @@ -3407,7 +3407,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/mean_outcome/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_outcome" @@ -3428,7 +3428,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/mean_across_celltypes/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_celltypes" @@ -3449,7 +3449,7 @@ meta = [ "functionalityNamespace" : "control_methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/control_methods/mean_across_compounds/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/control_methods/mean_across_compounds" @@ -3470,7 +3470,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/nn_retraining_with_pseudolabels/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/nn_retraining_with_pseudolabels" @@ -3491,7 +3491,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/scape/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/scape" @@ -3512,7 +3512,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/jn_ap_op2/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/jn_ap_op2" @@ -3533,7 +3533,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/lgc_ensemble/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/lgc_ensemble" @@ -3554,7 +3554,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/transformer_ensemble/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/transformer_ensemble" @@ -3575,7 +3575,7 @@ meta = [ "functionalityNamespace" : "methods", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/methods/pyboost/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/methods/pyboost" @@ -3596,7 +3596,7 @@ meta = [ "functionalityNamespace" : "metrics", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/metrics/mean_rowwise_error/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_error" @@ -3617,7 +3617,7 @@ meta = [ "functionalityNamespace" : "metrics", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/metrics/mean_rowwise_correlation/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/metrics/mean_rowwise_correlation" @@ -3673,7 +3673,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_benchmark", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }''')) diff --git a/target/nextflow/workflows/run_stability_analysis/.config.vsh.yaml b/target/nextflow/workflows/run_stability_analysis/.config.vsh.yaml index e1617623..f820cbc9 100644 --- a/target/nextflow/workflows/run_stability_analysis/.config.vsh.yaml +++ b/target/nextflow/workflows/run_stability_analysis/.config.vsh.yaml @@ -261,7 +261,7 @@ functionality: functionalityNamespace: "process_dataset" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/process_dataset/bootstrap/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/bootstrap" - name: "workflows/process_dataset" @@ -278,7 +278,7 @@ functionality: functionalityNamespace: "workflows" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/workflows/process_dataset/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/process_dataset" - name: "workflows/run_benchmark" @@ -295,7 +295,7 @@ functionality: functionalityNamespace: "workflows" output: "" platform: "" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" executable: "/nextflow/workflows/run_benchmark/main.nf" writtenPath: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_benchmark" repositories: @@ -337,5 +337,5 @@ info: output: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_stability_analysis" executable: "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_stability_analysis/main.nf" viash_version: "0.8.6" - git_commit: "33a27528c858187bbea4118dc8960ca6889f3bb8" + git_commit: "a623d3ad92e82dc099ecaf024de153237d275931" git_remote: "https://github.com/openproblems-bio/task_perturbation_prediction" diff --git a/target/nextflow/workflows/run_stability_analysis/main.nf b/target/nextflow/workflows/run_stability_analysis/main.nf index 6a98176e..5b0e6e74 100644 --- a/target/nextflow/workflows/run_stability_analysis/main.nf +++ b/target/nextflow/workflows/run_stability_analysis/main.nf @@ -3128,7 +3128,7 @@ meta = [ "functionalityNamespace" : "process_dataset", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/process_dataset/bootstrap/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/process_dataset/bootstrap" @@ -3149,7 +3149,7 @@ meta = [ "functionalityNamespace" : "workflows", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/workflows/process_dataset/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/process_dataset" @@ -3170,7 +3170,7 @@ meta = [ "functionalityNamespace" : "workflows", "output" : "", "platform" : "", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "executable" : "/nextflow/workflows/run_benchmark/main.nf" }, "writtenPath" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_benchmark" @@ -3226,7 +3226,7 @@ meta = [ "platform" : "nextflow", "output" : "/home/runner/work/task_perturbation_prediction/task_perturbation_prediction/target/nextflow/workflows/run_stability_analysis", "viash_version" : "0.8.6", - "git_commit" : "33a27528c858187bbea4118dc8960ca6889f3bb8", + "git_commit" : "a623d3ad92e82dc099ecaf024de153237d275931", "git_remote" : "https://github.com/openproblems-bio/task_perturbation_prediction" } }'''))