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CHANGELOG.md

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task_cyto_batch_integration x.y.z

BREAKING CHANGES

NEW FUNCTIONALITY

  • Initialised repository with API files, readme, and a few test resources.

  • Added methods/harmonypy component (PR #3).

  • Added methods/limma_remove_batch_effect component (PR #7).

  • Added three negative control methods (PR #8):

    • control_methods/shuffle_integration
    • control_methods/shuffle_integration_by_batch
    • control_methods/shuffle_integration_by_cell_type
  • Added metrics/emd_per_samples component (PR #9).

MAJOR CHANGES

MINOR CHANGES

  • Enabled unit tests (PR #2).

  • Added integrated test resource (PR #5).

  • Updated file description in yaml file (PR #15).

BUGFIXES