forked from iGEM-Engineering/iGEM-package-template
-
Notifications
You must be signed in to change notification settings - Fork 0
/
BT1_Wci_α_mating_factor_signal.gb
80 lines (80 loc) · 3.57 KB
/
BT1_Wci_α_mating_factor_signal.gb
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
LOCUS BT1_Wci_α_mating_factor_signal 363 bp DNA linear UNK 12-MAR-2023
DEFINITION α-mating factor secretion signal from Wickerhamomyces ciferrii. BT1
syntax TACT/CCAT.
ACCESSION .
VERSION .
KEYWORDS Yeast Protein Expression Toolkit; Golden Gate Assembly; OpenMTA; iGEM;
Open Yeast Collection IIA Part.
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 406)
AUTHORS Scott Pownall, Ian Caven, Open Science Network Society
TITLE Direct Submission
JOURNAL https://iGEM.org/
REFERENCE 2 (bases 44 to 328)
AUTHORS Chenwei Zou, Lingfang Lu, Shengyan Wang, Chenshan Zhang, Xuequn Chen,
Yao Lin, Yide Huang.
TITLE The α-mating factor secretion signals and endogenous signal peptides
for recombinant protein secretion in Komagataella phaffii.
JOURNAL Biotechnol Biofuels Bioprod. 2022 Dec 16;15(1):140
PubMed ID: 36527112
doi: 10.1186/s13068-022-02243-6
FEATURES Location/Qualifiers
protein_bind join(4..9,12..15)
/label="BbsI"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
protein_bind 17..24
/label="PacI"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
protein_bind 26..31
/label="XbaI"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
protein_bind 33..38
/label="BsaI"
/ApEinfo_fwdcolor="#00FF2C"
/ApEinfo_revcolor="#00FF2C"
misc_feature 40..43
/label="B"
/ApEinfo_revcolor="#ffef86"
/ApEinfo_fwdcolor="#ffef86"
CDS 44..106
/codon_start=1
/label="W.ci. αMF signal"
/translation="MQLSLLTSLAIVSTLLGSSFA"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
CDS 107..328
/codon_start=1
/label="W.ci. αMF pro peptide"
/translation="APVENINIKDNGNGTSEADVPGTSQGVEFPFAKEAIIEAVSLGND
IAPIVLNDAVYFVNTTTVDKELESKLGKR"
/ApEinfo_fwdcolor="#2B8AE2"
/ApEinfo_revcolor="#2B8AE2"
misc_feature 330..333
/label="T1"
/ApEinfo_revcolor="#ffef86"
/ApEinfo_fwdcolor="#ffef86"
protein_bind complement(335..340)
/label="BsaI"
/ApEinfo_fwdcolor="#00FF2C"
/ApEinfo_revcolor="#00FF2C"
protein_bind 341..346
/label="SpeI"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
protein_bind complement(join(349..352,355..360))
/label="BbsI"
/ApEinfo_fwdcolor="#8A2BE2"
/ApEinfo_revcolor="#8A2BE2"
ORIGIN
1 ggcGAAGACa gGGAGcTTAA TTAAcTCTAG AcGGTCTCcT ACTatgcaac tttctttact
61 aacttctttg gccattgttt ccactttact aggctcttcg tttgctgctc cagtggagaa
121 tatcaatatc aaagacaatg gcaatggcac cagtgaagct gatgttcctg gaacttctca
181 aggtgttgag tttccgtttg ccaaagaagc catcattgaa gctgtttctt taggcaatga
241 tattgctcca attgttctca atgatgctgt ttattttgtc aataccacca ctgttgacaa
301 agagctggaa agcaaacttg gcaaacgatC CATgGAGACC actagtcgCG CTtcGTCTTC
361 tga
//