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bf_downloads.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<link rel="stylesheet" href="images/plonematch.css" type="text/css" />
<style type="text/css">
[touch-action = "none"]{
-ms-touch-action:none;
touch-action:none;
}
[touch-action = "pan-x"]{
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[touch-action = "scroll"],
[touch-action = "pan-x pan-y"],
[touch-action = "pan-y pan-x"]{
-ms-touch-action:pan-x pan-y;
touch-action:pan-x pan-y;
}</style>
<title></title>
</head>
<body id="index" class="home">
<!-- OME Banner - START -->
<div id="portal-top">
<div id="portal-header">
<ul id="portal-siteactions">
<li>
<br />
</li>
</ul><a id="portal-logo" accesskey="1"
href="http://downloads.openmicroscopy.org/"
name="portal-logo"><img src="images/logo.jpg" alt=""
title="" height="73" width="450" /></a>
<div id="portal-globalnav">
<br />
</div>
</div>
<div id="portal-personaltools-wrapper">
<ul id="portal-personaltools" class="visualInline">
<li>
<br />
</li>
</ul>
</div>
</div>
<div class="visualClear" id="clear-space-before-wrapper-table">
<!-- OME Banner - END -->
<div class="entry-content" style="margin-left:20px;">
<h2>Bio-Formats @VERSION@ Downloads</h2>
<p><strong><a href="#tools"
>Tools</a> | <a href="#api"
>API</a> | <a
href="#components"
>Components</a> | <a
href="#code">Code</a> | <a
href="#previous">Previous versions</a>
</strong></p>
<ul>
<li>
<p>Full documentation is available to <a
href="@DOC_URL@">read on the web</a> or to <a
href="@DOC@">download as zipped html</a>.</p>
</li>
<li>
<p>Internet Explorer sometimes renames JAR files to ZIP
(e.g., bioformats_package.jar becomes
bioformats_package.zip); if this happens to you,
simply rename the file back to its original name
after the download is complete.</p>
</li>
<li>
<p>For some browsers, you may need to right-click or
control-click the link and choose "Save link as..."
or a similar option to download the file.</p>
</li>
</ul>
<h2><a name="tools" id="tools"></a>Bio-Formats tools
downloads</h2>
<div class="alt-table">
<table width="800" border="0" cellpadding="5"
summary="Bio-Formats tools downloads">
<tbody>
<tr>
<th width="269">Client</th>
<th width="85">Size</th>
<th width="150">File Name</th>
<th width="125">Checksum</th>
</tr>
<tr>
<td><a href="@bioformats_package.jar@"><img
src="images/bf_package.png"
alt="Bio-Formats Package" /></a></td>
<td align="center"
>@bioformats_package.jar_SIZE@</td>
<td>@bioformats_package.jar_BASE@</td>
<td align="center">@bioformats_package.jar_SHA1@
(<a href="@[email protected]"
>SHA1</a>)</td>
</tr>
<tr>
<td><a href="@COMMAND_LINE_TOOLS@"><img
src="images/bf_command_line_tools.png"
alt="Command Line Tools" /></a></td>
<td align="center"
>@COMMAND_LINE_TOOLS_SIZE@</td>
<td>@COMMAND_LINE_TOOLS_BASE@</td>
<td align="center">@COMMAND_LINE_TOOLS_SHA1@ (<a
href="@[email protected]"
>SHA1</a>)</td>
</tr>
<tr>
<td><a href="@MATLAB_TOOLS@"><img
src="images/bf_matlab_toolbox.png"
alt="MATLAB Toolbox" /></a></td>
<td align="center">@MATLAB_TOOLS_SIZE@</td>
<td>@MATLAB_TOOLS_BASE@</td>
<td align="center">@MATLAB_TOOLS_SHA1@ (<a
href="@[email protected]">SHA1</a>)</td>
</tr>
<tr>
<td><a href="@OCTAVE_PACKAGE@"><img
src="images/bf_octave_package.png"
alt="Octave Package" /></a></td>
<td align="center">@OCTAVE_PACKAGE_SIZE@</td>
<td>@OCTAVE_PACKAGE_BASE@</td>
<td align="center">@OCTAVE_PACKAGE_SHA1@ (<a
href="@[email protected]">SHA1</a>)</td>
</tr>
</tbody>
</table>
</div>
<ul>
<li>
<p>@bioformats_package.jar_BASE@ is the complete bundle
(for end users) containing everything needed to read
images into ImageJ using Bio-Formats. Instructions
for installing Bio-Formats in ImageJ are available
in the <a
href="@DOC_URL@/users/imagej/installing.html"
>user guide</a>.</p>
</li>
<li>
<p>@COMMAND_LINE_TOOLS_BASE@ is a bundle of scripts for
using Bio-Formats on the command line with
bioformats_package.jar included so you do not
have to install both separately. See the <a
href="@DOC_URL@/users/comlinetools/index.html"
>command line tools documentation</a> for
further information.</p>
</li>
<li>
<p>@MATLAB_TOOLS_BASE@ is a bundle of functions for
using Bio-Formats from MATLAB with
bioformats_package.jar included so you do not
have to install both separately. See the <a
href="@DOC_URL@/users/matlab/index.html">MATLAB
documentation</a> for further information.</p>
</li>
<li>
<p>@OCTAVE_PACKAGE_BASE@ is a bundle of functions for
using Bio-Formats from Octave. You also need to
install bioformats_package.jar separately. See the <a
href="@DOC_URL@/users/octave/index.html">Octave
documentation</a> for further information.</p>
</li>
</ul>
<h2><a name="api" id="api"></a>Bio-Formats API
documentation</h2>
<div class="alt-table">
<table width="800" border="0" cellpadding="5" summary="Bio-Formats API
documentation">
<tbody>
<tr>
<th width="269">API Documentation</th>
<th width="85">Size</th>
<th width="150">File Name</th>
<th width="125">SHA1 Checksum</th>
</tr>
<tr>
<td><a href="@JAVADOCS@"><img
src="images/bf_api_doc_zip.png"
alt="API Documentation Download"
/></a></td>
<td align="center">@JAVADOCS_SIZE@</td>
<td>@JAVADOCS_BASE@</td>
<td align="center">@JAVADOCS_SHA1@ (<a
href="@[email protected]">SHA1</a>)</td>
</tr>
</tbody>
</table>
</div>
<ul>
<li>
<p>The Bio-Formats API documentation is also available
to read on the web <a href="api/">here</a>.</p>
</li>
</ul>
<h2><a name="components" id="components"></a>Bio-Formats
components downloads</h2>
<div class="alt-table">
<table width="800" border="0" cellpadding="5" summary="Bio-Formats
components downloads">
<tbody>
<tr>
<th width="180">Project</th>
<th width="150">@VERSION@</th>
</tr>
<tr>
<th colspan="2">Package</th>
</tr>
<tr>
<td>Bio-Formats package</td>
<td><a href="@bioformats_package.jar@"
>bioformats_package.jar</a></td>
</tr>
<tr>
<td>LOCI Tools</td>
<td><a href="@loci_tools.jar@"
>loci_tools.jar</a></td>
</tr>
<tr>
<th colspan="2">Core</th>
</tr>
<tr>
<td>Bio-Formats API library</td>
<td><a href="@formats-api.jar@"
>formats-api.jar</a></td>
</tr>
<tr>
<td>Bio-Formats BSD library</td>
<td><a href="@formats-bsd.jar@"
>formats-bsd.jar</a></td>
</tr>
<tr>
<td>Bio-Formats GPL library</td>
<td><a href="@formats-gpl.jar@"
>formats-gpl.jar</a></td>
</tr>
<tr>
<td>Bio-Formats Plugins for ImageJ</td>
<td><a href="@bio-formats_plugins.jar@"
>bio-formats_plugins.jar</a></td>
</tr>
<tr>
<td>Bio-Formats testing framework</td>
<td><a
href="@bio-formats-testing-framework.jar@"
>bio-formats-testing-framework.jar</a></td>
</tr>
<tr>
<th align="center" colspan="2">Fork</th>
</tr>
<tr>
<td>JAI Image I/O Tools</td>
<td><a href="@jai_imageio.jar@"
>jai_imageio.jar</a></td>
</tr>
<tr>
<td>TurboJPEG</td>
<td><a href="@turbojpeg.jar@"
>turbojpeg.jar</a></td>
</tr>
</tbody>
</table>
</div>
<h2><a name="code" id="code"></a>Source code</h2>
<div class="alt-table">
<table width="800" border="0" cellpadding="5" summary="Bio-Formats Code">
<tbody>
<tr>
<th width="269">Source Code</th>
<th width="91">Size</th>
<th width="270">File Name</th>
<th width="120">Checksum</th>
</tr>
<tr>
<td><a href="@SOURCE_CODE_TXZ@" target="_blank"><img
src="images/bf_source_code_tar.png"
alt="XZ-Compressed Tape Archive Source Code" /></a></td>
<td align="center">@SOURCE_CODE_TXZ_SIZE@</td>
<td>@SOURCE_CODE_TXZ_BASE@</td>
<td align="center">@SOURCE_CODE_TXZ_SHA1@ (<a
href="@[email protected]">SHA1</a>)</td>
</tr>
<tr>
<td><a href="@SOURCE_CODE_ZIP@" target="_blank"><img
src="images/bf_source_code.png"
alt="Zipped Source Code" /></a></td>
<td align="center">@SOURCE_CODE_ZIP_SIZE@</td>
<td>@SOURCE_CODE_ZIP_BASE@</td>
<td align="center">@SOURCE_CODE_ZIP_SHA1@ (<a
href="@[email protected]">SHA1</a>)</td>
</tr>
</tbody>
</table>
</div>
<div class="alt-table">
<table width="278" border="0" cellpadding="5" summary="Bio-Formats Code links">
<tbody>
<tr>
<th width="264">Source Code Link</th>
</tr>
<tr>
<td><a
href="http://github.com/openmicroscopy/bioformats"
target="_blank"><img
src="images/github_repository.png"
alt="GitHub Repository Link" /></a></td>
</tr>
<tr>
<td><a href="@TAG_URL@" target="_blank"><img
src="images/git_tag.png"
alt="GitHub Tag" /></a></td>
</tr>
</tbody>
</table>
</div>
<h2><a name="previous" id="previous"></a>Previous versions</h2>
<ul>
<li>
<p>Previous versions of Bio-Formats can be found on the
<a
href="http://downloads.openmicroscopy.org/bio-formats/?C=M;O=D"
>Bio-Formats archive</a> page.</p>
</li>
</ul>
</div><!-- /.entry-content -->
<!-- OME Footer - Start -->
<div class="visualClear" id="clear-space-before-footer"
><!-- --></div>
<div id="portal-footer">
<p>
<acronym title="Copyright">©</acronym> 2000-@YEAR@
University of Dundee & Open Microscopy Environment. <a
href="http://www.openmicroscopy.org/site/about/licensing-attribution/licensing"
>Creative Commons Attribution 3.0 Unported License</a>
</p>
<p> OME source code is available under the <a
href="http://www.openmicroscopy.org/site/about/licensing"
>GNU General public license</a> or through commercial
license from <a
href="http://www.openmicroscopy.org/site/about/development-teams/glencoe-software"
>Glencoe Software</a>
</p>
</div>
<div class="visualClear">
<!-- OME Footer - END -->
</div>
</div>
</body>
</html>