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DESCRIPTION
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DESCRIPTION
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Package: Retip
Type: Package
Title: Retention Time Prediction for Metabolomics
Version: 2.0
Authors@R: c(
person("Paolo", "Bonini", , "[email protected]", c("aut", "cre")),
person("Tobias", "Kind", , "[email protected]",role = "aut"),
person("Hiroshi", "Tsugawa", , "[email protected]", role = "aut"),
person("Dinesh", "Barupal", , "[email protected]", role = "aut"),
person("Oliver", "Fiehn", , "[email protected]", role = "aut"))
Description: Predicted retention time can be useful in liquid chromatography analysis to identify unknowns and removing false positive annotations.
It uses five different machine learning algorithms to built a stable, accurate and fast RT prediction model.
Retip also includes 20 useful biochemical databases.
License: CC BY 4.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Depends:
R (>= 4.4),
ggplot2,
keras
Imports:
stringi,
caret,
xgboost,
doParallel,
brnn,
rcdk,
dplyr,
gridExtra,
grid,
gtable,
lattice,
h2o,
randomForest,
lightgbm
Suggests:
knitr,
rmarkdown
Enhances:
lightgbm,
Retiplib
URL: https://www.retip.app
VignetteBuilder: knitr