Version v2.0.0

• Support co-assembly and binning by specific assembly_group
• Support vamb's multisplit-binning by specific binning_group
• Remove co-alignment, co-assembly, co-binning, co-predict, co-checkm, co-classify module
• Remove profiling module and kraken2-bracken module, make prepare for quantpi
• Update dereplicate logic for all bins
• Update classify logic for all bins
• Tidy code
• Improve performance
• Fix bugs and typo

Version 1.1.0

• Support GraphBin2 binning refine (now not support GraphBin)
• Support VAMB binning (multi-split binning based on multi-samples)
• Support Krona report
• Support rmhost using SOAPaligner
• Support rmhost using minimap2
• Support rmhost using Kraken2
• Add other profiling method
• Update config.yaml and cluter.yaml, change some default parameters
• Fix bugs

Version 1.0.5

• Fix CONCOCT binning basename error

Version 1.0.4

• Update config.yaml
• Fix bugs

Version 1.0.3

• Update HUMAnN 2&3 output
• fix simulate bugs

Version 1.0.2

• Add sync subcommand

Version 1.0.1

• Fix bugs
• Update config.yaml, cluster.yaml, more friendly
• Update samples.tsv parser

Version 1.0.0

• Support GraphBin binning
• Support OPERA-MS assembly
• Support coassembly + binning
• Support HUMAnN3 profiling
• Support GTDBTk batch run
• Update assembly statistics
• More friendly tips
• Fix bugs

Version 0.9.3

• adjust code structure
• hot fix metaSPAdes output mv issue

Version 0.9.2

• fix metaSPAdes output mv bugs
• fix MaxBin2 runtime error bugs
• fix Das_Tool runtime error bugs