_quarto.yml

project: 
  type: website
  output-dir: docs
  render:
    - "*.*"
    - "!notebooks/*.ipynb"

execute:
  freeze: auto
date: now
date-format: "YYYY-MM-DDTHH:mm"
website:
  page-navigation: true  
  title: "Hyperspectral products for fisheries"
  favicon: images/pace.gif
  site-url: https://ocean-satellite-tools.github.io/fish-pace
  repo-url: https://github.com/ocean-satellite-tools/fish-pace
  repo-actions: [edit, issue, source]
  
  page-footer: <img src="https://raw.githubusercontent.com/nmfs-opensci/assets/main/logo/nmfs-opensci-logo3.png" alt="NMFS OpenSci" style="width:200px"><br />Fish-PACE HackWeek (2025)
 
  sidebar:
    title: "PACE products for fisheries and aquaculture"
    pinned: true
    align: center
    tools: 
      - icon: globe
        href: https://github.com/ocean-satellite-tools
        text: "GH org"
      - icon: github
        href: https://github.com/ocean-satellite-tools/fish-pace
        text: "repo"

    style: "docked"
    search: true
    collapse-level: 1
    toc-expand: false
    contents:
      - text: "Home"
        href: index.html
      - section: "Getting started"
        contents:
          - text: "Introduction"
            href: content/1_introduction.md
          - text: "Which satellites?"
            href: content/1_which_satellites.md
      - section: "Hyperspectral products"
        contents:
          - text: "Chlorophyll-a"
            href: content/2_chla.md
          - text: "Phytoplankton carbon"
            href: content/2_phytoplankton_carbon.md
          - text: "Diffuse attenuation coefficients"
            href: content/2_kd.md
          - text: "Phyto absorption coefficients"
            href: content/2_aph.md
          - text: "Non-phyto absorption coefficients"
            href: content/2_adg.md
          - text: "Spectral particle backscattering coefficients"
            href: content/2_bbp.md
          - text: "Photosynthetically available radiation"
            href: content/2_par.md
          - text: "Remote sensing reflectance"
            href: content/2_rrs.md
          - text: "Apparent Visible Wavelength"
            href: content/2_avw.md

format:
  html:
    theme:
      light: cosmo
      dark: [cosmo, theme-dark.scss]
    code-background: true
    code-copy: true
    css: styles.css
    toc: true
    toc-depth: 2
    include-before-body: translate.html

filters:
  - include-files.lua
  - quarto