From 6a73607a50f61979688850edb7487da2b407a5c2 Mon Sep 17 00:00:00 2001 From: Nico Matentzoglu Date: Sun, 15 Sep 2024 19:35:44 +0300 Subject: [PATCH] Update data-availability.md --- docs/reference/data-availability.md | 16 +++++++++++++++- 1 file changed, 15 insertions(+), 1 deletion(-) diff --git a/docs/reference/data-availability.md b/docs/reference/data-availability.md index 856ea910..0d353607 100644 --- a/docs/reference/data-availability.md +++ b/docs/reference/data-availability.md @@ -3,4 +3,18 @@ - [uPheno 2 releases](https://github.com/obophenotype/upheno-dev/releases) - [uPheno 2 pattern library](https://github.com/obophenotype/upheno/tree/master/src/patterns/dosdp-patterns) - [uPheno 2 related mappings](https://data.monarchinitiative.org/mappings/latest/index.html) -- + +### Data assets + +- [Main ontology file (upheno.owl)](https://github.com/obophenotype/upheno-dev/releases/latest/download/upheno.owl) +- SSSOM Mappings + - [Cross-species mappings](https://github.com/obophenotype/upheno-dev/blob/master/src/mappings/upheno-cross-species.sssom.tsv): https://github.com/obophenotype/upheno-dev/blob/master/src/mappings/upheno-cross-species.sssom.tsv + - [uPheno species-neutral mappings](https://github.com/obophenotype/upheno-dev/blob/master/src/mappings/upheno-species-independent.sssom.tsv): https://github.com/obophenotype/upheno-dev/blob/master/src/mappings/upheno-species-independent.sssom.tsv +- [MGI and IMPC manually curated MP-HP mappings](https://github.com/mapping-commons/mh_mapping_initiative): https://github.com/mapping-commons/mh_mapping_initiative +- Cross-species semantic similarity tables: https://data.monarchinitiative.org/semantic-similarity/latest/index.html + + +### Other links + +- [Documentation](https://obophenotype.github.io/upheno/) +- [Tutorial on phenotype data](https://oboacademy.github.io/obook/lesson/phenotype-data/)