From 96c61fd8eef5a25007bb23dd2a1239b7cc61b412 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Wed, 23 Apr 2014 08:56:17 -0700 Subject: [PATCH] null --- Makefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Makefile b/Makefile index bcc5ccd394..0397f3684b 100644 --- a/Makefile +++ b/Makefile @@ -520,8 +520,8 @@ METAZOAN_OBOS = $(patsubst %,local-%.obo,$(METAZOAN_ONTS)) METAZOAN_BRIDGES = $(patsubst %,bridge/uberon-bridge-to-%.owl,$(METAZOAN_ONTS)) local-%.obo: merged.obo wget $(OBO)/$*.owl -O cached-$*.owl && owltools cached-$*.owl --repair-relations -o -f obo $@.tmp && egrep -v '^(disjoint|domain|range)' $@.tmp | perl -npe 's/default-namespace: FlyBase development CV/default-namespace: fbdv/' > $@ -local-%.owl: - owltools $(OBO)/$*.owl --repair-relations --rename-entity $(OBO)/$*#develops_in $(OBO)/RO_0002203 --rename-entity $(OBO)/$*#develops_from $(OBO)/RO_0002202 --rename-entity $(OBO)/$*#preceded_by $(OBO)/RO_0002087 --rename-entity $(OBO)/$*#connected_to $(OBO)/UBREL_0000001 --remove-axioms -t DisjointClasses --remove-axioms -t ObjectPropertyRange --remove-axioms -t ObjectPropertyDomain -o -f ofn $@ +local-%.owl: + owltools $(OBO)/$*.owl --repair-relations --rename-entity $(OBO)/$*#develops_in $(OBO)/RO_0002203 --rename-entity $(OBO)/$*#develops_from $(OBO)/RO_0002202 --rename-entity $(OBO)/$*#preceded_by $(OBO)/RO_0002087 --rename-entity $(OBO)/$*#connected_to $(OBO)/RO_0002170 --remove-axioms -t DisjointClasses --remove-axioms -t ObjectPropertyRange --remove-axioms -t ObjectPropertyDomain -o -f ofn $@ local-NIF_GrossAnatomy.obo: merged.obo wget http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-GrossAnatomy.owl -O cached-$@.owl && perl -pi -ne 's@http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-GrossAnatomy.owl#@$(OBO)/NIF_GrossAnatomy_@g' cached-$@.owl && owltools cached-$@.owl -o -f obo $@