diff --git a/cl-base.owl b/cl-base.owl index 311520490..5a8b0a88c 100644 --- a/cl-base.owl +++ b/cl-base.owl @@ -17,7 +17,7 @@ xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + An ontology of cell types. Cell Ontology @@ -33,7 +33,7 @@ See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo. - 2023-12-05 + 2024-01-04 @@ -4713,7 +4713,6 @@ Covers cells actively being cultured or stored in a quiescent state for future u A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. - BTO:0002606 CALOHA:TS-0415 FMA:54536 @@ -4721,7 +4720,6 @@ Covers cells actively being cultured or stored in a quiescent state for future u neuroglial cell neuroglia - Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell @@ -11188,8 +11186,6 @@ The modern definition of neurosecretion has evolved to include the release of an A cell whose nucleus contains a single haploid genome. - - haploid cell @@ -25198,10 +25194,12 @@ radial glial cells acting as neural progenitors throughout life. A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -50230,7 +50228,7 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. 2010-09-22T01:57:40Z @@ -50249,9 +50247,9 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. GOC:tfm - ISBN:978-0-7020-2958-5 + ISBN:9780702029585 @@ -69039,6 +69037,7 @@ Covers cells actively being cultured or stored in a quiescent state for future u 2021-11-25T09:30:45Z + There is growing evidence that molecular markers characterizing double negative thymocytes are different across species, especially in human versus mouse thymus. This term is restricted for use with human data. committed double negative thymocyte (Homo sapiens) @@ -81436,9 +81435,7 @@ plexiform layer using GABA. - KUPO:0001118 - ureter smooth muscle cell @@ -95320,12 +95317,10 @@ Midget bipolar cells (imb, fmb) have larger axon terminals at greater distances A urothelial cell that is part of the regenerative layer(s) of cells directly superficial to basal cells in urothelium. The layer of intermediate cells in the urothelium ranges from one to several layers thick depending on the species with intermediate cells attached to adjacent cell layers and one another via desmosomes. - https://orcid.org/0000-0003-3065-9183 2023-06-16T07:53:43Z FMA:84155 urothelial intermediate cell - It has been noted in at least some mammalian species that the urothelial intermediate cell type is similar to basal cells by expressing CK17 and (unlike umbrella cells) p63 but is positive for uroplakins (UPK) and negative for CK5. Urothelial intermediate cells have also been noted to be larger in diameter than urothelial basal cells. intermediate cell of urothelium @@ -95355,13 +95350,11 @@ Midget bipolar cells (imb, fmb) have larger axon terminals at greater distances A urothelial cell that is terminally differentiated and part of the urothelial apical surface that forms the high-resistance barrier of urothelium. Umbrella cells have been described as the largest of urothelial cell types, highly polarized, and, in some species, multinucleated. In the relaxed state, these cells form a dome-shaped structure at the apical pole and can also cover multiple underlying intermediate cells, leading to the name umbrella cells. In contrast, these cells flatten when the bladder is filled. - https://orcid.org/0000-0003-3065-9183 2023-06-16T07:59:43Z FMA:84149 facet cell of urothelium superficial cell of urothelium - Umbrella cells are attached to sub-superficial cell layers via desmosomes, while tight junctions localized between superficial cells aid in forming a high-resistance barrier function. Another distinguishing feature of an umbrella cell type is the presence of subapical discoidal/fusiform-shaped vesicles contributing to the plasticity in urothelial cell surface area through a regulated process of endocytosis/exocytosis. It has been noted in at least some mammalian species that the urothelial umbrella cell type expresses UPK1A, UPK1B, UPK2 and UPK3A. Unlike intermediate and basal cells of the urothelium, CK17 is reported to be completely absent and p63 not expressed in umbrella cells. umbrella cell of urothelium @@ -98432,6 +98425,40 @@ Midget bipolar cells (imb, fmb) have larger axon terminals at greater distances + + + + + + + + + + + + + + + An endothelial cell that is part of a central vein of liver. + + endothelial cell of central vein + endothelial cell of central vein of liver + + + + + An endothelial cell that is part of a central vein of liver. + PMID:28287163 + + + + + endothelial cell of central vein + PMID:28287163 + + + + @@ -106675,14 +106702,14 @@ Midget bipolar cells (imb, fmb) have larger axon terminals at greater distances - + - + - + diff --git a/cl.obo b/cl.obo index b9a7fac10..7c38c6316 100644 --- a/cl.obo +++ b/cl.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: releases/2023-12-05 +data-version: releases/2024-01-04 subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -102,7 +102,7 @@ property_value: dc-description "An ontology of cell types." xsd:string property_value: dc-title "Cell Ontology" xsd:string property_value: dcterms-license http://creativecommons.org/licenses/by/4.0/ property_value: has_ontology_root_term CL:0000000 -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -1766,7 +1766,6 @@ name: glial cell def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [MESH:D009457] comment: Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 subset: general_cell_types_upper_slim -subset: human_reference_atlas synonym: "neuroglia" RELATED [] synonym: "neuroglial cell" EXACT [] xref: BTO:0002606 @@ -1774,7 +1773,6 @@ xref: CALOHA:TS-0415 xref: FBbt:00005144 xref: FMA:54536 is_a: CL:0000095 ! neuron associated cell -relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: CL:0000126 @@ -4336,12 +4334,10 @@ relationship: bearer_of PATO:0001377 ! polyploid id: CL:0000413 name: haploid cell def: "A cell whose nucleus contains a single haploid genome." [FB:ma, GOC:tfm] -subset: human_reference_atlas is_a: CL:0000000 ! cell intersection_of: CL:0000000 ! cell intersection_of: bearer_of PATO:0001375 ! haploid relationship: bearer_of PATO:0001375 ! haploid -relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: CL:0000414 @@ -9618,6 +9614,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -9627,6 +9624,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: CL:0000840 @@ -18784,7 +18782,7 @@ creation_date: 2010-09-22T01:40:44Z [Term] id: CL:0002363 name: keratocyte -def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate." [GOC:tfm, ISBN:978-0-7020-2958-5] +def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate." [GOC:tfm, ISBN:9780702029585] subset: eye_upper_slim subset: human_reference_atlas synonym: "corneal fibroblast" EXACT [] @@ -25784,6 +25782,7 @@ id: CL:0009082 name: committed double negative thymocyte (Homo sapiens) def: "The human equivalent of a DN3 thymocyte; these thymocytes finish the process of beta selection." [PMID:32304633] comment: There is growing evidence that molecular markers characterizing double negative thymocytes are different across species, especially in human versus mouse thymus. This term is restricted for use with human data. +subset: human_reference_atlas is_a: CL:0002489 ! double negative thymocyte relationship: dc-contributor https://orcid.org/0000-0002-2825-0621 relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -30010,14 +30009,12 @@ relationship: part_of UBERON:0001288 ! loop of Henle [Term] id: CL:1000979 name: ureter smooth muscle cell -subset: human_reference_atlas xref: KUPO:0001118 is_a: CL:0000192 {is_inferred="true"} ! smooth muscle cell is_a: CL:1000601 {is_inferred="true"} ! ureteral cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0006855 ! muscular coat of ureter relationship: part_of UBERON:0006855 ! muscular coat of ureter -relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: CL:1001005 @@ -30149,8 +30146,8 @@ name: kidney afferent arteriole endothelial cell subset: human_reference_atlas xref: KUPO:0001039 is_a: CL:1000412 {is_inferred="true"} ! endothelial cell of arteriole +is_a: CL:1000413 ! endothelial cell of artery is_a: CL:1001006 ! kidney afferent arteriole cell -is_a: CL:1001216 ! interlobulary artery endothelial cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0004639 ! renal afferent arteriole relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -30162,7 +30159,6 @@ xref: KUPO:0001040 is_a: CL:0008035 ! microcirculation associated smooth muscle cell is_a: CL:1001006 ! kidney afferent arteriole cell is_a: CL:1001066 ! kidney arteriole smooth muscle cell -is_a: CL:1001217 ! interlobulary artery smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0004639 ! renal afferent arteriole @@ -34781,11 +34777,9 @@ id: CL:4030055 name: intermediate cell of urothelium def: "A urothelial cell that is part of the regenerative layer(s) of cells directly superficial to basal cells in urothelium. The layer of intermediate cells in the urothelium ranges from one to several layers thick depending on the species with intermediate cells attached to adjacent cell layers and one another via desmosomes." [doi:10.1038/s41385-022-00565-0] comment: It has been noted in at least some mammalian species that the urothelial intermediate cell type is similar to basal cells by expressing CK17 and (unlike umbrella cells) p63 but is positive for uroplakins (UPK) and negative for CK5. Urothelial intermediate cells have also been noted to be larger in diameter than urothelial basal cells. {xref="doi:10.1038/s41385-022-00565-0"} -subset: human_reference_atlas synonym: "urothelial intermediate cell" EXACT [doi:10.1007/978-3-030-14366-4_8] xref: FMA:84155 is_a: CL:0000731 ! urothelial cell -relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: dc-contributor "https://orcid.org/0000-0003-3065-9183" xsd:string property_value: dcterms-date "2023-06-16T07:53:43Z" xsd:dateTime @@ -34794,12 +34788,10 @@ id: CL:4030056 name: umbrella cell of urothelium def: "A urothelial cell that is terminally differentiated and part of the urothelial apical surface that forms the high-resistance barrier of urothelium. Umbrella cells have been described as the largest of urothelial cell types, highly polarized, and, in some species, multinucleated. In the relaxed state, these cells form a dome-shaped structure at the apical pole and can also cover multiple underlying intermediate cells, leading to the name umbrella cells. In contrast, these cells flatten when the bladder is filled." [doi:10.1038/s41385-022-00565-0] comment: Umbrella cells are attached to sub-superficial cell layers via desmosomes, while tight junctions localized between superficial cells aid in forming a high-resistance barrier function. Another distinguishing feature of an umbrella cell type is the presence of subapical discoidal/fusiform-shaped vesicles contributing to the plasticity in urothelial cell surface area through a regulated process of endocytosis/exocytosis. It has been noted in at least some mammalian species that the urothelial umbrella cell type expresses UPK1A, UPK1B, UPK2 and UPK3A. Unlike intermediate and basal cells of the urothelium, CK17 is reported to be completely absent and p63 not expressed in umbrella cells. {xref="doi:10.1038/s41385-022-00565-0"} -subset: human_reference_atlas synonym: "facet cell of urothelium" EXACT [doi:10.1038/s41385-022-00565-0] synonym: "superficial cell of urothelium" EXACT [doi:10.1038/s41385-022-00565-0] xref: FMA:84149 is_a: CL:0000731 ! urothelial cell -relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: dc-contributor "https://orcid.org/0000-0003-3065-9183" xsd:string property_value: dcterms-date "2023-06-16T07:59:43Z" xsd:dateTime @@ -35800,6 +35792,17 @@ relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 relationship: dc-contributor https://orcid.org/0000-0003-4361-817X property_value: dcterms-date "2023-10-16T13:15:55Z" xsd:dateTime +[Term] +id: CL:4033061 +name: endothelial cell of central vein of liver +def: "An endothelial cell that is part of a central vein of liver." [PMID:28287163] +synonym: "endothelial cell of central vein" BROAD [PMID:28287163] +is_a: CL:0000115 ! endothelial cell +intersection_of: CL:0000115 ! endothelial cell +intersection_of: part_of UBERON:0006841 ! central vein of liver +relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 +relationship: part_of UBERON:0006841 ! central vein of liver + [Term] id: CL:4040000 name: glial restricted tripotential precursor cell @@ -96385,8 +96388,8 @@ namespace: biological_process def: "The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue." [GOC:dph] is_a: GO:0007517 ! muscle organ development intersection_of: GO:0048856 ! anatomical structure development -intersection_of: results_in_development_of UBERON:0014892 ! skeletal muscle organ -relationship: results_in_development_of UBERON:0014892 ! skeletal muscle organ +intersection_of: results_in_development_of UBERON:0014892 ! skeletal muscle organ, vertebrate +relationship: results_in_development_of UBERON:0014892 ! skeletal muscle organ, vertebrate created_by: dph creation_date: 2009-04-10T08:25:12Z @@ -141303,8 +141306,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -141316,7 +141319,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -141372,7 +141375,7 @@ namespace: ncbi_taxonomy synonym: "Conjugatophyceae" RELATED synonym [] synonym: "Gamophyceae" RELATED synonym [] synonym: "Gamophyta" RELATED synonym [] -synonym: "gamophytes" EXACT common_name [] +synonym: "gamophytes" EXACT OMO:0003003 [] synonym: "Zygnematophyceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131221 ! Streptophytina @@ -141515,7 +141518,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:197563 name: Mandibulata namespace: ncbi_taxonomy -synonym: "mandibulates" EXACT common_name [] +synonym: "mandibulates" EXACT OMO:0003003 [] xref: GC_ID:1 xref: PMID:11557979 xref: PMID:9727836 @@ -141703,7 +141706,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -141759,7 +141762,7 @@ property_value: has_rank NCBITaxon:infraorder id: NCBITaxon:314295 name: Hominoidea namespace: ncbi_taxonomy -synonym: "ape" EXACT common_name [] +synonym: "ape" EXACT OMO:0003003 [] synonym: "apes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:9526 ! Catarrhini @@ -141777,10 +141780,10 @@ property_value: has_rank NCBITaxon:order id: NCBITaxon:3193 name: Embryophyta namespace: ncbi_taxonomy -synonym: "higher plants" EXACT common_name [] -synonym: "land plants" EXACT common_name [] +synonym: "higher plants" EXACT OMO:0003003 [] +synonym: "land plants" EXACT OMO:0003003 [] synonym: "land plants" RELATED blast_name [] -synonym: "plants" EXACT common_name [] +synonym: "plants" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:131221 ! Streptophytina property_value: has_rank NCBITaxon:clade @@ -141855,7 +141858,7 @@ synonym: "Chlorobionta" RELATED synonym [] synonym: "Chlorophyta/Embryophyta group" EXACT equivalent_name [] synonym: "chlorophyte/embryophyte group" EXACT equivalent_name [] synonym: "Chloroplastida" RELATED synonym [] -synonym: "green plants" EXACT common_name [] +synonym: "green plants" EXACT OMO:0003003 [] synonym: "green plants" RELATED blast_name [] xref: GC_ID:1 xref: PMID:16248873 @@ -141889,7 +141892,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -141914,7 +141917,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -141988,7 +141991,7 @@ id: NCBITaxon:3398 name: Magnoliopsida namespace: ncbi_taxonomy synonym: "Angiospermae" RELATED synonym [] -synonym: "angiosperms" EXACT common_name [] +synonym: "angiosperms" EXACT OMO:0003003 [] synonym: "flowering plants" EXACT genbank_common_name [] synonym: "flowering plants" RELATED blast_name [] synonym: "Magnoliophyta" RELATED synonym [] @@ -142034,7 +142037,7 @@ id: NCBITaxon:38254 name: Glaucocystophyceae namespace: ncbi_taxonomy synonym: "algae" RELATED in_part [] -synonym: "glaucocystophytes" EXACT common_name [] +synonym: "glaucocystophytes" EXACT OMO:0003003 [] synonym: "Glaucophyceae" RELATED synonym [] synonym: "Glaucophyta" RELATED synonym [] xref: GC_ID:1 @@ -142073,8 +142076,8 @@ property_value: has_rank NCBITaxon:subclass id: NCBITaxon:436486 name: Dinosauria namespace: ncbi_taxonomy -synonym: "dinosaur" EXACT common_name [] -synonym: "dinosaurs" EXACT common_name [] +synonym: "dinosaur" EXACT OMO:0003003 [] +synonym: "dinosaurs" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:8492 ! Archosauria property_value: has_rank NCBITaxon:clade @@ -142142,7 +142145,7 @@ name: Ascomycota namespace: ncbi_taxonomy synonym: "ascomycete fungi" RELATED blast_name [] synonym: "ascomycetes" EXACT genbank_common_name [] -synonym: "sac fungi" EXACT common_name [] +synonym: "sac fungi" EXACT OMO:0003003 [] xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:451864 ! Dikarya @@ -142220,12 +142223,14 @@ property_value: has_rank NCBITaxon:genus id: NCBITaxon:4932 name: Saccharomyces cerevisiae namespace: ncbi_taxonomy -synonym: "baker's yeast" EXACT genbank_common_name [] -synonym: "brewer's yeast" EXACT common_name [] +alt_id: NCBITaxon:41870 +synonym: "baker's yeast" EXACT OMO:0003003 [] +synonym: "brewer's yeast" EXACT genbank_common_name [] synonym: "Candida robusta" RELATED synonym [] synonym: "Mycoderma cerevisiae" RELATED synonym [] -synonym: "S. cerevisiae" EXACT common_name [] synonym: "Saccharomyces capensis" RELATED synonym [] +synonym: "Saccharomyces cerevisiae 'var. diastaticus'" EXACT equivalent_name [] +synonym: "Saccharomyces diastaticus" RELATED synonym [] synonym: "Saccharomyces italicus" RELATED synonym [] synonym: "Saccharomyces oviformis" RELATED synonym [] synonym: "Saccharomyces uvarum var. melibiosus" RELATED synonym [] @@ -142283,7 +142288,7 @@ property_value: has_rank NCBITaxon:genus id: NCBITaxon:58023 name: Tracheophyta namespace: ncbi_taxonomy -synonym: "vascular plants" EXACT common_name [] +synonym: "vascular plants" EXACT OMO:0003003 [] synonym: "vascular plants" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:3193 ! Embryophyta @@ -142293,7 +142298,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:58024 name: Spermatophyta namespace: ncbi_taxonomy -synonym: "seed plants" EXACT common_name [] +synonym: "seed plants" EXACT OMO:0003003 [] synonym: "seed plants" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:78536 ! Euphyllophyta @@ -142314,7 +142319,7 @@ namespace: ncbi_taxonomy synonym: "cnidarians" EXACT genbank_common_name [] synonym: "cnidarians" RELATED blast_name [] synonym: "Coelenterata" RELATED in_part [] -synonym: "coelenterates" EXACT common_name [] +synonym: "coelenterates" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:6072 ! Eumetazoa property_value: has_rank NCBITaxon:phylum @@ -142323,7 +142328,7 @@ property_value: has_rank NCBITaxon:phylum id: NCBITaxon:6157 name: Platyhelminthes namespace: ncbi_taxonomy -synonym: "flatworm" EXACT common_name [] +synonym: "flatworm" EXACT OMO:0003003 [] synonym: "flatworms" EXACT genbank_common_name [] synonym: "flatworms" RELATED blast_name [] xref: GC_ID:1 @@ -142335,10 +142340,10 @@ id: NCBITaxon:6231 name: Nematoda namespace: ncbi_taxonomy synonym: "Nemata" RELATED synonym [] -synonym: "nematode" EXACT common_name [] -synonym: "nematodes" EXACT common_name [] +synonym: "nematode" EXACT OMO:0003003 [] +synonym: "nematodes" EXACT OMO:0003003 [] synonym: "nematodes" RELATED blast_name [] -synonym: "roundworm" EXACT common_name [] +synonym: "roundworm" EXACT OMO:0003003 [] synonym: "roundworms" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1206794 ! Ecdysozoa @@ -142349,6 +142354,8 @@ id: NCBITaxon:6236 name: Rhabditida namespace: ncbi_taxonomy alt_id: NCBITaxon:33251 +alt_id: NCBITaxon:6308 +synonym: "Strongylida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:119089 ! Chromadorea property_value: has_rank NCBITaxon:order @@ -142457,8 +142464,8 @@ name: Actinopterygii namespace: ncbi_taxonomy synonym: "Actinopterygi" RELATED synonym [] synonym: "bony fishes" RELATED blast_name [] -synonym: "fish" EXACT common_name [] -synonym: "fishes" EXACT common_name [] +synonym: "fish" EXACT OMO:0003003 [] +synonym: "fishes" EXACT OMO:0003003 [] synonym: "Osteichthyes" RELATED in_part [] synonym: "ray-finned fishes" EXACT genbank_common_name [] xref: GC_ID:1 @@ -142531,8 +142538,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -142555,8 +142562,8 @@ property_value: has_rank NCBITaxon:order id: NCBITaxon:9479 name: Platyrrhini namespace: ncbi_taxonomy -synonym: "monkey" EXACT common_name [] -synonym: "monkeys" EXACT common_name [] +synonym: "monkey" EXACT OMO:0003003 [] +synonym: "monkeys" EXACT OMO:0003003 [] synonym: "New World monkeys" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:314293 ! Simiiformes @@ -142589,9 +142596,9 @@ name: Callithrix jacchus namespace: ncbi_taxonomy alt_id: NCBITaxon:9484 synonym: "Callithrix jacchus jacchus" RELATED synonym [] -synonym: "common marmoset" EXACT common_name [] +synonym: "common marmoset" EXACT OMO:0003003 [] synonym: "Simia jacchus" RELATED synonym [] -synonym: "white ear-tufted marmoset" EXACT common_name [] +synonym: "white ear-tufted marmoset" EXACT OMO:0003003 [] synonym: "white-tufted-ear marmoset" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1965096 ! Callithrix @@ -142627,7 +142634,7 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:9605 name: Homo namespace: ncbi_taxonomy -synonym: "humans" EXACT common_name [] +synonym: "humans" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:207598 ! Homininae property_value: has_rank NCBITaxon:genus @@ -142663,8 +142670,8 @@ id: NCBITaxon:9685 name: Felis catus namespace: ncbi_taxonomy alt_id: NCBITaxon:36475 -synonym: "cat" EXACT common_name [] -synonym: "cats" EXACT common_name [] +synonym: "cat" EXACT OMO:0003003 [] +synonym: "cats" EXACT OMO:0003003 [] synonym: "domestic cat" EXACT genbank_common_name [] synonym: "Felis domesticus" RELATED synonym [] synonym: "Felis silvestris catus" RELATED synonym [] @@ -157588,6 +157595,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -160817,8 +160825,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -162294,9 +162300,9 @@ xref: UMLS:C0448325 {source="ncithesaurus:Tongue_Muscle"} xref: UMLS:C1710437 {source="ncithesaurus:Tongue_Skeletal_Muscle_Tissue"} xref: VHOG:0001390 xref: Wikipedia:Muscles_of_tongue -is_a: UBERON:0010959 ! craniocervical muscle is_a: UBERON:0013765 ! digestive system element -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 {source="FEED:rd"} ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to_part_of UBERON:0001723 ! tongue union_of: UBERON:0001575 ! extrinsic muscle of tongue union_of: UBERON:0001576 ! intrinsic muscle of tongue @@ -163097,12 +163103,11 @@ synonym: "cavernous branch of cavernous part of internal carotid artery" EXACT [ synonym: "ramus sinus cavernosi (pars cavernosa) (arteria carotis interna)" EXACT LATIN [FMA:70527, FMA:TA] xref: BTO:0002996 xref: FMA:70527 -is_a: UBERON:0003496 ! head blood vessel -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery intersection_of: supplies UBERON:0001675 ! trigeminal ganglion -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery relationship: supplies UBERON:0001675 ! trigeminal ganglion [Term] @@ -163738,7 +163743,7 @@ union_of: UBERON:0000490 ! unilaminar epithelium relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -167433,6 +167438,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -167702,7 +167708,6 @@ relationship: develops_from UBERON:0003887 {source="Wikipedia"} ! intraembryonic relationship: location_of UBERON:0002409 ! pericardial fluid relationship: luminal_space_of UBERON:0002406 ! pericardial sac relationship: part_of UBERON:0002406 {source="FMA"} ! pericardial sac -relationship: present_in_taxon NCBITaxon:7718 {source="PMID:20959416"} relationship: surrounded_by UBERON:0002357 ! serous pericardium property_value: UBPROP:0000001 "Anatomical space in which the heart is located and is surrounded by the pericardium.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0002220", ontology="TAO", source="ZFIN:curator"} property_value: UBPROP:0000003 "In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart (of other tetrapods) is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes). Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000556", ontology="VHOG", source="ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.205-206", source="http://bgee.unil.ch/"} @@ -168783,7 +168788,7 @@ intersection_of: UBERON:0002385 ! muscle tissue intersection_of: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: develops_from UBERON:0003082 ! myotome -relationship: part_of UBERON:0014892 ! skeletal muscle organ +relationship: part_of UBERON:0014892 ! skeletal muscle organ, vertebrate property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/c/c0/Skeletal_muscle.jpg" xsd:anyURI property_value: editor_note "TODO - add skeletal muscle organ? See GO:0060538 skeletal muscle organ development. Todo - group FBbt:00005073 - somatic muscle." xsd:string property_value: UBPROP:0000001 "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005277", ontology="TAO", source="ZFIN:curator"} @@ -170324,11 +170329,11 @@ xref: NCIT:C33597 xref: SCTID:244266009 xref: UMLS:C0037996 {source="ncithesaurus:Splenic_Artery"} xref: Wikipedia:Splenic_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0002106 ! spleen disjoint_from: UBERON:0001640 ! celiac artery -relationship: branching_part_of UBERON:0001640 ! celiac artery +relationship: connecting_branch_of UBERON:0001640 ! celiac artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0002106 ! spleen property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png" xsd:anyURI @@ -170352,11 +170357,11 @@ xref: NCIT:C52981 xref: SCTID:244276007 xref: UMLS:C0226328 {source="ncithesaurus:Middle_Colic_Artery"} xref: Wikipedia:Middle_colic_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0001157 ! transverse colon -relationship: branching_part_of UBERON:0001182 ! superior mesenteric artery +relationship: connecting_branch_of UBERON:0001182 ! superior mesenteric artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001157 ! transverse colon property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray537.png" xsd:anyURI @@ -170379,13 +170384,13 @@ xref: NCIT:C32760 xref: SCTID:244279000 xref: UMLS:C0226323 {source="ncithesaurus:Ileo-colic_Artery"} xref: Wikipedia:Ileocolic_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0001153 ! caecum intersection_of: supplies UBERON:0001154 ! vermiform appendix intersection_of: supplies UBERON:0002116 ! ileum -relationship: branching_part_of UBERON:0001182 ! superior mesenteric artery +relationship: connecting_branch_of UBERON:0001182 ! superior mesenteric artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001153 ! caecum relationship: supplies UBERON:0001154 ! vermiform appendix @@ -173291,11 +173296,10 @@ xref: NCIT:C52685 xref: SCTID:43210002 xref: UMLS:C0226377 {source="ncithesaurus:Inferior_Vesical_Artery"} xref: Wikipedia:Inferior_vesical_artery -is_a: UBERON:0004573 ! systemic artery is_a: UBERON:0009027 ! vesical artery intersection_of: UBERON:0009027 ! vesical artery intersection_of: supplies UBERON:0006082 ! fundus of urinary bladder -relationship: branching_part_of UBERON:0001309 ! internal iliac artery +relationship: connecting_branch_of UBERON:0001309 ! internal iliac artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0000998 {gci_filler="UBERON:0003101", gci_relation="part_of"} ! seminal vesicle relationship: supplies UBERON:0001000 {gci_filler="UBERON:0003101", gci_relation="part_of"} ! vas deferens @@ -173324,6 +173328,7 @@ is_a: UBERON:0003468 ! ureteric segment of renal artery is_a: UBERON:0009027 ! vesical artery intersection_of: UBERON:0009027 ! vesical artery intersection_of: supplies UBERON:0000056 ! ureter +relationship: connecting_branch_of UBERON:0001310 ! umbilical artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/0/02/Internal_iliac_branches.PNG" xsd:anyURI property_value: UBPROP:0000011 "The first part of the superior vesical artery represents the terminal section of the previous portion of the umbilical artery (fetal hypogastric artery)[WP]" xsd:string @@ -173493,7 +173498,7 @@ xref: FMA:19086 xref: MA:0000534 is_a: UBERON:0003833 {source="MA"} ! abdominal segment muscle is_a: UBERON:0005179 ! pelvic region element -intersection_of: UBERON:0014892 {source="FMAdef"} ! skeletal muscle organ +intersection_of: UBERON:0014892 {source="FMAdef"} ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002355 {source="FMAdef"} ! pelvic region of trunk [Term] @@ -173939,11 +173944,11 @@ xref: NCIT:C32436 xref: SCTID:181348000 xref: UMLS:C0226455 {source="ncithesaurus:Deep_Femoral_Artery"} xref: Wikipedia:Deep_femoral_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0002060 ! femoral artery +intersection_of: connecting_branch_of UBERON:0002060 ! femoral artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0002060 ! femoral artery +relationship: connecting_branch_of UBERON:0002060 ! femoral artery relationship: part_of UBERON:0035551 ! deep vasculature relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png" xsd:anyURI @@ -173962,10 +173967,10 @@ xref: FMA:20799 xref: MA:0001996 xref: SCTID:244326008 xref: Wikipedia:Medial_circumflex_femoral_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0007119 ! neck of femur -relationship: branching_part_of UBERON:0001355 {source="FMA"} ! deep femoral artery +relationship: connecting_branch_of UBERON:0001355 {source="FMA"} ! deep femoral artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0007119 ! neck of femur property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png" xsd:anyURI @@ -174115,7 +174120,7 @@ xref: MA:0000672 xref: RETIRED_EHDAA2:0000974 xref: Wikipedia:Leg_muscle is_a: UBERON:0003663 ! hindlimb muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0004466 {source="prolog"} ! musculature of leg relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -174191,6 +174196,7 @@ is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0009472 ! axilla relationship: connected_to UBERON:0001533 ! subclavian artery +relationship: connecting_branch_of UBERON:0001394 ! axillary artery relationship: part_of UBERON:0001467 ! shoulder relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0009472 ! axilla @@ -175003,7 +175009,7 @@ xref: MA:0001579 xref: NCIT:C12291 xref: SCTID:244092005 xref: UMLS:C0222101 {source="ncithesaurus:Skin_of_the_Lip"} -is_a: UBERON:0001084 ! skin of head +is_a: UBERON:0000014 ! zone of skin intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0001833 ! lip relationship: part_of UBERON:0001833 ! lip @@ -175493,7 +175499,7 @@ xref: VHOG:0000846 xref: Wikipedia:Deltoid_muscle is_a: UBERON:0001482 {source="FMA"} ! muscle of shoulder is_a: UBERON:0034908 ! scapular muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0000976 ! humerus intersection_of: attaches_to UBERON:0001105 ! clavicle bone intersection_of: attaches_to UBERON:0006849 ! scapula @@ -175567,8 +175573,8 @@ synonym: "shoulder muscle organ" EXACT [OBOL:automatic] xref: EMAPA:36154 xref: FMA:33531 xref: MA:0000633 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0003461 ! shoulder bone relationship: attaches_to UBERON:0003461 ! shoulder bone relationship: overlaps UBERON:0001467 ! shoulder @@ -175932,7 +175938,7 @@ xref: MA:0000537 xref: RETIRED_EHDAA2:0001430 is_a: UBERON:0001325 ! muscle of pelvis is_a: UBERON:0010890 ! pelvic complex muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001271 ! pelvic girdle region relationship: part_of UBERON:0004470 {source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! musculature of pelvic girdle property_value: UBPROP:0000012 "Note that in MA, this is a subclass of pelvis muscle; in FMA this is a hindlimb muscle, but recall in FMA hindlimb includes the girdle." xsd:string {external_ontology="MA"} @@ -175952,7 +175958,7 @@ xref: FMA:37369 xref: MA:0000652 xref: SCTID:67240005 is_a: UBERON:0003663 ! hindlimb muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002387 ! pes relationship: part_of UBERON:0004488 {source="prolog"} ! musculature of pes @@ -175975,7 +175981,7 @@ xref: EMAPA:36053 xref: MA:0000594 xref: RETIRED_EHDAA2:0000142 is_a: UBERON:0003662 ! forelimb muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001460 ! arm relationship: part_of UBERON:0004474 {source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! musculature of arm relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -175997,7 +176003,7 @@ xref: FMA:37372 xref: MA:0000628 xref: SCTID:110540008 is_a: UBERON:0003662 ! forelimb muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002398 ! manus relationship: part_of UBERON:0004489 {source="prolog"} ! musculature of manus relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -176643,7 +176649,7 @@ xref: MA:0002583 xref: Wikipedia:Arcuate_arteries_of_the_kidney is_a: UBERON:0001637 ! artery is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0009885 ! interlobar artery +relationship: connecting_branch_of UBERON:0009885 ! interlobar artery relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg" xsd:anyURI @@ -176812,7 +176818,7 @@ xref: UMLS:C0023054 {source="ncithesaurus:Laryngeal_Muscle"} xref: Wikipedia:Muscles_of_larynx is_a: UBERON:0002377 ! muscle of neck is_a: UBERON:0003831 ! respiratory system muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001737 ! larynx relationship: contributes_to_morphology_of UBERON:0001015 ! musculature relationship: contributes_to_morphology_of UBERON:0001737 ! larynx @@ -176873,7 +176879,7 @@ xref: SCTID:244785008 xref: UMLS:C0224196 {source="ncithesaurus:Hyoglossus_Muscle"} xref: Wikipedia:Hyoglossus_muscle is_a: UBERON:0001575 {source="FMA"} ! extrinsic muscle of tongue -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0001685 ! hyoid bone intersection_of: attaches_to UBERON:0001723 ! tongue intersection_of: innervated_by UBERON:0001650 ! hypoglossal nerve @@ -176903,7 +176909,7 @@ xref: MA:0002296 xref: SCTID:244782006 xref: VHOG:0000825 is_a: UBERON:0000378 {is_inferred="true"} ! tongue muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0004765 ! skeletal element intersection_of: attaches_to_part_of UBERON:0001723 ! tongue intersection_of: innervated_by UBERON:0001650 ! hypoglossal nerve @@ -176932,7 +176938,7 @@ xref: SCTID:244788005 xref: VHOG:0000748 is_a: UBERON:0000378 {is_inferred="true"} ! tongue muscle is_a: UBERON:0004120 ! mesoderm-derived structure -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to_part_of UBERON:0001723 ! tongue intersection_of: innervated_by UBERON:0001650 ! hypoglossal nerve intersection_of: part_of UBERON:0001723 ! tongue @@ -176977,7 +176983,7 @@ xref: UMLS:C0015460 {source="ncithesaurus:Facial_Muscle"} xref: Wikipedia:Facial_muscles xref: XAO:0001013 is_a: UBERON:0015789 ! cranial or facial muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: innervated_by UBERON:0001647 ! facial nerve relationship: develops_from UBERON:0003066 {source="FEED", source="Wikipedia"} ! pharyngeal arch 2 relationship: innervated_by UBERON:0001647 ! facial nerve @@ -177420,7 +177426,7 @@ xref: UMLS:C0226109 {source="ncithesaurus:Facial_Artery"} xref: Wikipedia:Facial_artery is_a: UBERON:0035398 ! branch of external carotid artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery intersection_of: supplies UBERON:0001456 ! face relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001456 ! face @@ -177443,7 +177449,7 @@ xref: UMLS:C0226117 {source="ncithesaurus:Occipital_Artery"} xref: Wikipedia:Occipital_artery is_a: UBERON:0035398 ! branch of external carotid artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery intersection_of: supplies UBERON:0000403 ! scalp intersection_of: supplies UBERON:0002377 ! muscle of neck relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -177502,9 +177508,8 @@ xref: SCTID:181310005 xref: UMLS:C0029078 {source="ncithesaurus:Opthalmic_Artery"} xref: Wikipedia:Ophthalmic_artery xref: XAO:0000368 -is_a: UBERON:0003496 ! head blood vessel -is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +is_a: UBERON:0001637 ! artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" xsd:anyURI @@ -177556,11 +177561,10 @@ xref: NCIT:C52948 xref: SCTID:369324002 xref: UMLS:C0226171 {source="ncithesaurus:Lacrimal_Artery"} xref: Wikipedia:Lacrimal_artery -is_a: UBERON:0003496 ! head blood vessel -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001817 ! lacrimal gland -relationship: branching_part_of UBERON:0001619 {source="FMA"} ! ophthalmic artery +relationship: connecting_branch_of UBERON:0001619 {source="FMA"} ! ophthalmic artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001817 ! lacrimal gland property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png" xsd:anyURI @@ -177590,14 +177594,13 @@ xref: TAO:0005001 xref: UMLS:C0149559 {source="ncithesaurus:Posterior_Communicating_Artery"} xref: Wikipedia:Posterior_communicating_artery xref: ZFA:0005001 -is_a: UBERON:0003496 ! head blood vessel is_a: UBERON:0004573 ! systemic artery is_a: UBERON:0006347 ! communicating artery is_a: UBERON:0015212 ! lateral structure intersection_of: UBERON:0006347 ! communicating artery -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery intersection_of: part_of UBERON:0003709 ! circle of Willis -relationship: branching_part_of UBERON:0001532 {source="FMA", source="ZFA"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 {source="FMA", source="ZFA"} ! internal carotid artery relationship: in_lateral_side_of UBERON:0003709 {source="FMA-abduced-lr"} ! circle of Willis relationship: part_of UBERON:0003709 ! circle of Willis relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -180084,6 +180087,7 @@ namespace: uberon def: "The part of the lacrimal duct that connects the lacrimal punctum to the lacrimal sac." [http://orcid.org/0000-0002-6601-2165] subset: uberon_slim synonym: "canaliculus lacrimalis" RELATED LATIN [Wikipedia:Lacrimal_canaliculi] +synonym: "lacrimal duct" RELATED [https://www.bartleby.com/lit-hub/anatomy-of-the-human-body/fig-896/, ISBN:1587341026] xref: EMAPA:37624 {source="MA:th"} xref: FMA:58245 xref: MA:0001294 @@ -180095,7 +180099,6 @@ is_a: UBERON:0004111 ! anatomical conduit relationship: connects UBERON:0001351 ! lacrimal sac relationship: connects UBERON:0010284 ! lacrimal punctum relationship: part_of UBERON:0001850 {source="FMA"} ! lacrimal drainage system -property_value: editor_note "TODO - resolve lacrimal canaliculus vs lacrimal duct" xsd:string [Term] id: UBERON:0001772 @@ -180216,8 +180219,8 @@ xref: TAO:0000473 xref: XAO:0003230 xref: ZFA:0000473 is_a: UBERON:0005177 ! trunk region element -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002100 ! trunk relationship: part_of UBERON:0004479 {source="prolog"} ! musculature of trunk property_value: editor_note "Note that this class excludes smooth muscle elements in the trunk region, such as the internal anal sphincter. This appears to be consistent with other ontologies such as FMA and ZFA which appear to only include skeletal muscles here. In fact the MA class 'trunk muscle' is classified as a 'set of skeletal muscles'." xsd:string @@ -182228,7 +182231,6 @@ relationship: connects UBERON:0010284 ! lacrimal punctum relationship: never_in_taxon NCBITaxon:8459 {source="PMID:7559104"} relationship: only_in_taxon NCBITaxon:32523 {source="ISBN:9780674021839"} ! Tetrapoda relationship: part_of UBERON:0001750 {source="FMA"} ! lacrimal apparatus -property_value: editor_note "TODO - resolve lacrimal canaliculus vs larcimal duct" xsd:string property_value: UBPROP:0000008 "chelonians lack a lacrimal duct, and lacrimal/harderian secretions remain in or spill from the conjunctival sac[PMID:7559104]" xsd:string [Term] @@ -184352,7 +184354,7 @@ xref: UMLS:C0175173 {source="BIRNLEX:2547"} xref: Wikipedia:Neocortex is_a: UBERON:0002616 ! regional part of brain relationship: contributes_to_morphology_of UBERON:0000956 ! cerebral cortex -relationship: only_in_taxon NCBITaxon:40674 {source="Wikipedia"} ! Mammalia +relationship: only_in_taxon NCBITaxon:7742 {source="Wikipedia"} ! Vertebrata relationship: part_of UBERON:0000956 ! cerebral cortex property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/77/Neocortex.jpg" xsd:anyURI property_value: RO:0002171 UBERON:0002264 {source="ABA"} @@ -186652,8 +186654,6 @@ relationship: only_in_taxon NCBITaxon:7776 ! Gnathostomata relationship: part_of UBERON:0000170 {note="some species only have a single lung"} ! pair of lungs relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: surrounded_by UBERON:0009778 {gci_relation="part_of", gci_filler="NCBITaxon:9606", source="FMA"} ! pleural sac -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/701" xsd:anyURI @@ -186816,11 +186816,10 @@ xref: NCIT:C52737 xref: SCTID:303426004 xref: UMLS:C0226334 {source="ncithesaurus:Inferior_Suprarenal_Artery"} xref: Wikipedia:Inferior_suprarenal_artery -is_a: UBERON:0004573 ! systemic artery is_a: UBERON:0005624 ! suprarenal artery intersection_of: UBERON:0005624 ! suprarenal artery -intersection_of: branching_part_of UBERON:0001184 ! renal artery -relationship: branching_part_of UBERON:0001184 ! renal artery +intersection_of: connecting_branch_of UBERON:0001184 ! renal artery +relationship: connecting_branch_of UBERON:0001184 ! renal artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png" xsd:anyURI @@ -186861,8 +186860,8 @@ xref: NCIT:C12715 xref: SCTID:244332003 xref: UMLS:C0015801 {source="ncithesaurus:Femoral_Artery"} xref: Wikipedia:Femoral_artery -is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001308 {source="FMA", source="WP"} ! external iliac artery +is_a: UBERON:0001637 ! artery +relationship: connecting_branch_of UBERON:0001308 {source="FMA", source="WP"} ! external iliac artery property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png" xsd:anyURI property_value: UBPROP:0000001 "Artery which supplies blood via branches to the hindlimbs.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010222", ontology="AAO", source="AAO:BJB"} @@ -187782,7 +187781,6 @@ relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Skin.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_M_Skin.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Skin.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Skin.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-skin.glb" xsd:anyURI property_value: IAO:0000232 "consider 'integumentary system' for invertebrates" xsd:string @@ -189063,8 +189061,6 @@ intersection_of: UBERON:0002048 ! lung intersection_of: in_right_side_of UBERON:0000170 ! pair of lungs relationship: in_right_side_of UBERON:0000170 ! pair of lungs property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/3/32/Gray972.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI property_value: UBPROP:0000003 "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000301", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.210", source="http://bgee.unil.ch/"} @@ -189092,8 +189088,6 @@ intersection_of: UBERON:0002048 ! lung intersection_of: in_left_side_of UBERON:0000170 ! pair of lungs relationship: in_left_side_of UBERON:0000170 ! pair of lungs property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/d/dd/Gray973.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI property_value: UBPROP:0000003 "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000618", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.210", source="http://bgee.unil.ch/"} @@ -189249,8 +189243,6 @@ relationship: part_of UBERON:0000101 {source="FMA"} ! lobe of lung relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: proximally_connected_to UBERON:0002183 ! lobar bronchus property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI @@ -189288,8 +189280,6 @@ relationship: located_in UBERON:0002224 ! thoracic cavity relationship: never_in_taxon NCBITaxon:8507 {source="Wikipedia"} relationship: part_of UBERON:0007196 ! tracheobronchial tree property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/1/18/Respiratory_system_complete_numbered.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI property_value: UBPROP:0000001 "Each of the two primary divisions of the trachea leading respectively into the right and the left lung. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000262", ontology="VHOG", source="http://bgee.unil.ch/"} @@ -191693,7 +191683,7 @@ xref: FMA:85216 xref: MA:0000496 is_a: UBERON:0001774 ! skeletal muscle of trunk is_a: UBERON:0005174 ! dorsal region element -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001137 ! dorsum relationship: part_of UBERON:0004469 {source="prolog"} ! musculature of back relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -193211,7 +193201,7 @@ xref: SCTID:244718003 xref: ZFA:0001652 is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010959 ! craniocervical muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0003129 ! skull intersection_of: part_of UBERON:0000033 ! head relationship: attaches_to UBERON:0003129 ! skull @@ -193241,7 +193231,7 @@ xref: MESH:D009334 xref: NCIT:C33163 xref: UMLS:C0027532 {source="ncithesaurus:Neck_Muscle"} is_a: UBERON:0010959 ! craniocervical muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0000974 ! neck relationship: part_of UBERON:0004465 {source="prolog"} ! musculature of neck relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -193272,7 +193262,7 @@ xref: UMLS:C0000739 {source="ncithesaurus:Abdominal_Muscle"} xref: Wikipedia:Abdominal_muscle is_a: UBERON:0003833 ! abdominal segment muscle is_a: UBERON:0005172 ! abdomen element -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0002343 {source="prolog"} ! abdomen musculature relationship: part_of UBERON:0003697 ! abdominal wall @@ -193657,6 +193647,7 @@ def: "The paired channels leading from the lacrimal sacs to the inferior meatus subset: pheno_slim subset: uberon_slim synonym: "d. nasolacrimalis" RELATED LATIN [Wikipedia:Nasolacrimal_duct] +synonym: "lacrimal duct" RELATED [PMID:30285382] synonym: "nasolacrimal duct - posterior naris" BROAD [VHOG:0000664] synonym: "tear duct" RELATED [Wikipedia:Nasolacrimal_duct] xref: AAO:0000643 @@ -194173,6 +194164,7 @@ intersection_of: UBERON:0010913 ! vertebral element intersection_of: composed_primarily_of UBERON:0002481 ! bone tissue relationship: develops_from UBERON:0011094 ! vertebra cartilage element relationship: never_in_taxon NCBITaxon:7901 {source="Wikipedia"} +relationship: part_of UBERON:0001130 ! vertebral column property_value: editor_note "Consider changing name to make distinction from inferred superclass 'vertebral element' clear" xsd:string property_value: editor_note "we follow FMA in making this an irregular bone - however vertebra have 'epiphyses' which are currently classified as belonging to long bones" xsd:string property_value: UBPROP:0000001 "Endochondral bone that forms around the notochord and is part of the vertebral column.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001189", ontology="TAO", source="ZFIN:curator"} @@ -194638,7 +194630,7 @@ xref: FMA:9619 xref: MA:0000548 is_a: UBERON:0003830 ! thoracic segment muscle is_a: UBERON:0005175 ! chest organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001443 ! chest relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -194994,7 +194986,7 @@ xref: SCTID:244239009 xref: UMLS:C0226276 {source="ncithesaurus:Internal_Mammary_Artery"} xref: Wikipedia:Internal_thoracic_artery is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001533 ! subclavian artery +relationship: connecting_branch_of UBERON:0001533 ! subclavian artery relationship: part_of UBERON:0001533 ! subclavian artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0000310 ! breast @@ -195722,7 +195714,7 @@ is_a: UBERON:0005398 ! female reproductive gland relationship: capable_of GO:0042701 ! progesterone secretion relationship: develops_from UBERON:0001305 ! ovarian follicle relationship: has_part CL:0000175 ! luteal cell -relationship: only_in_taxon NCBITaxon:40674 {source="Wikipedia"} ! Mammalia +relationship: only_in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of UBERON:0000992 {source="MA"} ! ovary relationship: present_in_taxon NCBITaxon:7762 {source="PMID:20959416"} relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -195976,7 +195968,7 @@ intersection_of: part_of UBERON:0002101 ! limb disjoint_from: UBERON:0010912 ! subdivision of skeleton relationship: existence_ends_during UBERON:0000066 ! fully formed stage relationship: existence_starts_during UBERON:0000068 ! embryo stage -relationship: has_part UBERON:0014892 ! skeletal muscle organ +relationship: has_part UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: part_of UBERON:0002101 ! limb property_value: editor_note "TODO - align this with the CARO2 class 'appendage segment'; note the FMA class does not appear to require repetition" xsd:string property_value: UBPROP:0000012 "FMA has both limb segment and free limb segment, the former includes the girdles. Note that MA uses the term more generally and includes A,S,Z,S+Z(arm/leg), whereas FMA is just A,S,Z" xsd:string {external_ontology="FMA"} @@ -198494,13 +198486,12 @@ xref: VHOG:0000123 xref: Wikipedia:Caudal_artery xref: XAO:0000364 xref: ZFA:0000011 -is_a: UBERON:0003513 ! trunk blood vessel +is_a: UBERON:0001637 ! artery is_a: UBERON:0003524 ! tail blood vessel -is_a: UBERON:0004573 ! systemic artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0005805 ! dorsal aorta +intersection_of: connecting_branch_of UBERON:0005805 ! dorsal aorta intersection_of: part_of UBERON:0007812 ! post-anal tail -relationship: branching_part_of UBERON:0005805 ! dorsal aorta +relationship: connecting_branch_of UBERON:0005805 ! dorsal aorta relationship: part_of UBERON:2001073 ! axial vasculature property_value: UBPROP:0000001 "Extension of the dorsal aorta in the tail. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000011", ontology="TAO", source="ZFIN:curator"} property_value: UBPROP:0000001 "The posterior extension of the dorsal aorta to the tail region, which degenerates at metamorphosis.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0011023", ontology="AAO", source="ISBN:0-226-55763-4"} @@ -198832,7 +198823,7 @@ xref: XAO:0003169 xref: ZFA:0000863 is_a: UBERON:0011159 ! primary subdivision of cranial skeletal system relationship: never_in_taxon NCBITaxon:7777 {source="ISBN:0073040584"} -relationship: only_in_taxon NCBITaxon:7776 ! Gnathostomata +relationship: only_in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of UBERON:0010364 ! dermal skeleton property_value: editor_note "wikipedia treats skull roof and dermatocranium as synonymous, but some sources treat the roof as being part of the dermatocranium - see UBERONREF:0000007" xsd:string property_value: UBPROP:0000001 "Anatomical cluster that is part of the cranium and composed of dermally derived bones.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000863", ontology="TAO", source="ZFIN:curator"} @@ -199254,7 +199245,6 @@ relationship: part_of UBERON:0007196 ! tracheobronchial tree relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg" xsd:anyURI property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb" xsd:anyURI property_value: UBPROP:0000001 "An elongated tube which carries air to and from the lungs.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010140", ontology="AAO", source="AAO:BJB"} @@ -199310,7 +199300,7 @@ xref: SCTID:181889008 xref: VHOG:0000334 xref: Wikipedia:Cranium_(anatomy) is_a: UBERON:0000075 {source="FMA-inferred"} ! subdivision of skeletal system -relationship: part_of UBERON:0003129 ! skull +relationship: present_in_taxon NCBITaxon:7762 property_value: RO:0002171 UBERON:0003278 property_value: UBPROP:0000007 "cranial" xsd:string property_value: UBPROP:0000012 "the inclusion of the FMA class here is probably not quite correct, as this class includes as parts sutures, whereas this is not part of the bones of the cranium" xsd:string {external_ontology="FMA"} @@ -199344,7 +199334,6 @@ relationship: has_part UBERON:0003278 ! skeleton of lower jaw relationship: only_in_taxon NCBITaxon:89593 ! Craniata relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0010323 ! cranial skeletal system -relationship: present_in_taxon NCBITaxon:7762 property_value: UBPROP:0000012 "in FMA the skull is divided into orbit, neurocranium (8 parts), viscerocranium (26 parts). Here we have a separate overlapping division into cranium and mandible." xsd:string {external_ontology="FMA"} property_value: UBPROP:0000012 "in many ontologies, the structure called the cranium is inclusive of the mandible/lower jaw skeleton" xsd:string property_value: UBPROP:0000013 "A skull that is missing a mandible is only a cranium; this is the source of a very commonly made error in terminology. Those animals having skulls are called craniates" xsd:string {source="WP"} @@ -201797,8 +201786,6 @@ is_a: UBERON:0002183 ! lobar bronchus intersection_of: UBERON:0002183 ! lobar bronchus intersection_of: part_of UBERON:0002167 ! right lung relationship: part_of UBERON:0006518 {is_inferred="true", source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! right lung lobe -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI @@ -201819,8 +201806,6 @@ is_a: UBERON:0002183 ! lobar bronchus intersection_of: UBERON:0002183 ! lobar bronchus intersection_of: part_of UBERON:0002168 ! left lung relationship: part_of UBERON:0008951 {is_inferred="true", source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! left lung lobe -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI @@ -201923,7 +201908,7 @@ def: "Mesenchyme that is part of a developing tongue [Automatically generated de synonym: "tongue mesenchyme" EXACT [EHDAA2:0004614] xref: EHDAA2:0004614 xref: EMAPA:17882 -is_a: UBERON:0005253 ! head mesenchyme +is_a: UBERON:0003104 ! mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0001723 ! tongue relationship: part_of UBERON:0001723 ! tongue @@ -202701,7 +202686,7 @@ xref: Wikipedia:Ureteral_branches_of_renal_artery is_a: UBERON:0004573 ! systemic artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0000056 ! ureter -relationship: branching_part_of UBERON:0001184 {source="FMA"} ! renal artery +relationship: connecting_branch_of UBERON:0001184 {source="FMA"} ! renal artery relationship: part_of UBERON:0001184 {source="FMA"} ! renal artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0000056 ! ureter @@ -202734,11 +202719,10 @@ xref: MA:0001917 xref: SCTID:145137009 xref: Wikipedia:Superior_labial_artery is_a: UBERON:0003496 ! head blood vessel -is_a: UBERON:0004573 ! systemic artery is_a: UBERON:0009657 ! artery of lip intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001834 ! upper lip -relationship: branching_part_of UBERON:0001612 {source="FMA"} ! facial artery +relationship: connecting_branch_of UBERON:0001612 {source="FMA"} ! facial artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001834 ! upper lip @@ -202759,11 +202743,10 @@ xref: MA:0001916 xref: SCTID:145036002 xref: Wikipedia:Inferior_labial_artery is_a: UBERON:0003496 ! head blood vessel -is_a: UBERON:0004573 ! systemic artery is_a: UBERON:0009657 ! artery of lip intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001835 ! lower lip -relationship: branching_part_of UBERON:0001612 {source="FMA"} ! facial artery +relationship: connecting_branch_of UBERON:0001612 {source="FMA"} ! facial artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001835 ! lower lip @@ -203706,8 +203689,8 @@ name: hindlimb skin namespace: uberon def: "A zone of skin that is part of a hindlimb [Automatically generated definition]." [OBOL:automatic] synonym: "hind limb skin" EXACT [OBOL:automatic] -synonym: "lower limb skin" EXACT [https://orcid.org/0000-0002-0819-0473] synonym: "lower limb skin" EXACT [FMA:23102] +synonym: "lower limb skin" EXACT [https://orcid.org/0000-0002-0819-0473] synonym: "skin of hind limb" EXACT [OBOL:automatic] synonym: "skin of hindlimb" EXACT [OBOL:automatic] synonym: "skin of lower extremity" EXACT [OBOL:automatic] @@ -205118,8 +205101,6 @@ relationship: develops_from UBERON:0007267 ! trachea pre-cartilage rings relationship: part_of UBERON:0003126 ! trachea relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb" xsd:anyURI property_value: editor_note "check whether to classify as part of splanchoncranium" xsd:string @@ -205538,7 +205519,7 @@ synonym: "muscle organ of regio coxae" EXACT [OBOL:automatic] synonym: "regio coxae muscle organ" EXACT [OBOL:automatic] xref: MA:0000657 is_a: UBERON:0010890 ! pelvic complex muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001464 ! hip relationship: part_of UBERON:0001464 ! hip relationship: part_of UBERON:0004475 {source="prolog"} ! musculature of hip @@ -205566,7 +205547,7 @@ synonym: "toe muscle organ" EXACT [OBOL:automatic] xref: EMAPA:37333 {source="MA:th"} xref: MA:0000648 is_a: UBERON:0001498 ! muscle of pes -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001466 ! pedal digit relationship: part_of UBERON:0001466 ! pedal digit @@ -205599,8 +205580,8 @@ synonym: "limb skeletal muscle" EXACT [OBOL:exploratory] synonym: "muscle organ of limb" EXACT [OBOL:accepted] xref: EMAPA:32700 xref: MA:0000692 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002101 ! limb relationship: contributes_to_morphology_of UBERON:0001015 ! musculature relationship: part_of UBERON:0004480 {source="prolog"} ! musculature of limb @@ -205627,7 +205608,7 @@ xref: EMAPA:36049 xref: FMA:37348 is_a: UBERON:0003661 ! limb muscle is_a: UBERON:0014794 ! pectoral appendage muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002102 ! forelimb relationship: part_of UBERON:0004481 {source="prolog"} ! musculature of upper limb property_value: UBPROP:0000012 "FMA and MA class actually refer to muscles of entire pectoral complex" xsd:string {external_ontology="FMA"} @@ -205655,7 +205636,7 @@ xref: EFO:0001928 xref: FMA:37368 is_a: UBERON:0003661 ! limb muscle is_a: UBERON:0014795 ! pelvic appendage muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0004482 {source="prolog"} ! musculature of lower limb @@ -205682,7 +205663,7 @@ synonym: "terminal segment of free upper limb digit muscle organ" EXACT [OBOL:au xref: EMAPA:37331 {source="MA:th"} xref: MA:0000624 is_a: UBERON:0001500 ! muscle of manus -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002389 ! manual digit relationship: part_of UBERON:0002389 ! manual digit @@ -205703,7 +205684,7 @@ xref: EMAPA:37759 {source="MA:th"} xref: MA:0000699 xref: SCTID:113230005 is_a: UBERON:0004518 ! muscle of vertebral column -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0001095 ! caudal vertebra relationship: attaches_to UBERON:0001095 ! caudal vertebra relationship: overlaps UBERON:0007812 ! post-anal tail @@ -205809,7 +205790,7 @@ is_a: UBERON:0009198 {source="GO"} ! craniofacial suture intersection_of: UBERON:0002209 ! fibrous joint intersection_of: part_of UBERON:0003128 ! cranium relationship: contributes_to_morphology_of UBERON:0003128 ! cranium -relationship: developmentally_induced_by UBERON:0002363 {source="PMID:16496288"} ! dura mater +relationship: developmentally_induced_by UBERON:0002363 {gci_relation="part_of", gci_filler="NCBITaxon:40674", source="PMID:16496288"} ! dura mater relationship: part_of UBERON:0003128 ! cranium property_value: UBPROP:0000202 FMA:71385 @@ -206648,7 +206629,7 @@ synonym: "upper body muscle" RELATED [MA:0000561] xref: MA:0000561 is_a: UBERON:0001774 ! skeletal muscle of trunk is_a: UBERON:0005181 ! thoracic segment organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0000915 ! thoracic segment of trunk relationship: part_of UBERON:0004464 {source="prolog"} ! musculature of thorax @@ -206702,7 +206683,7 @@ xref: EMAPA:37060 {source="MA:th"} xref: MA:0000527 is_a: UBERON:0001774 ! skeletal muscle of trunk is_a: UBERON:0005173 ! abdominal segment element -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002417 ! abdominal segment of trunk [Term] @@ -207615,8 +207596,8 @@ xref: EMAPA:18167 xref: MA:0003153 xref: RETIRED_EHDAA2:0000160 xref: TAO:0001954 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to_part_of UBERON:0005944 ! axial skeleton plus cranial skeleton intersection_of: part_of UBERON:0013701 ! main body axis relationship: attaches_to_part_of UBERON:0005944 ! axial skeleton plus cranial skeleton @@ -207972,7 +207953,6 @@ synonym: "gut epithelium" EXACT [EHDAA2:0004567, MA:0003201, ZFA:0005123] xref: BTO:0000956 xref: EHDAA2:0004567 xref: EMAPA:32928 -xref: FBbt:00047143 xref: FBbt:00047166 xref: MA:0003201 xref: NCIT:C12963 @@ -211269,7 +211249,7 @@ xref: FMA:22470 xref: MA:0000684 xref: SCTID:245013005 is_a: UBERON:0001383 ! muscle of leg -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0000376 ! hindlimb stylopod relationship: part_of UBERON:0004463 {source="prolog"} ! musculature of hindlimb stylopod @@ -211309,7 +211289,7 @@ xref: FMA:37371 xref: MA:0000600 xref: SCTID:181631004 is_a: UBERON:0001499 ! muscle of arm -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002386 ! forelimb zeugopod relationship: part_of UBERON:0004487 {source="prolog"} ! musculature of forelimb zeugopod @@ -211329,7 +211309,7 @@ xref: FMA:37370 xref: MA:0000606 xref: SCTID:244979005 is_a: UBERON:0001499 ! muscle of arm -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0003822 ! forelimb stylopod relationship: part_of UBERON:0014791 {source="prolog"} ! musculature of forelimb stylopod property_value: editor_note "the FMA class 'muscle of arm' belongs here, do not move" xsd:string @@ -211349,7 +211329,7 @@ xref: FMA:22471 xref: MA:0000678 xref: SCTID:265806001 is_a: UBERON:0001383 ! muscle of leg -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0003823 ! hindlimb zeugopod relationship: part_of UBERON:0006067 {source="prolog"} ! musculature of hindlimb zeugopod property_value: editor_note "the FMA class 'muscle of leg' belongs here, do not move[cjm]" xsd:string @@ -213384,8 +213364,8 @@ namespace: uberon def: "A muscle that is attached to a vertebra of the vertebral column." [https://orcid.org/0000-0002-6601-2165] synonym: "vertebral column muscle" EXACT [FMA:22594] xref: FMA:22594 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0002412 ! vertebra relationship: attaches_to UBERON:0002412 ! vertebra @@ -213730,8 +213710,6 @@ is_a: UBERON:0000970 ! eye intersection_of: UBERON:0000970 ! eye intersection_of: in_left_side_of UBERON:0000468 ! multicellular organism relationship: in_left_side_of UBERON:0000468 ! multicellular organism -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" xsd:anyURI property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern" xsd:anyURI @@ -213754,8 +213732,6 @@ is_a: UBERON:0000970 ! eye intersection_of: UBERON:0000970 ! eye intersection_of: in_right_side_of UBERON:0000468 ! multicellular organism relationship: in_right_side_of UBERON:0000468 ! multicellular organism -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb" xsd:anyURI property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern" xsd:anyURI @@ -214016,8 +213992,8 @@ xref: ZFA:0005307 is_a: UBERON:0001637 ! artery is_a: UBERON:0001980 ! arteriole is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0004723 ! interlobular artery relationship: capable_of GO:0003093 {source="Wikipedia"} ! regulation of glomerular filtration +relationship: connecting_branch_of UBERON:0004723 ! interlobular artery relationship: contributes_to_morphology_of UBERON:0001229 ! renal corpuscle relationship: part_of UBERON:0001229 ! renal corpuscle relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -215486,7 +215462,7 @@ def: "A bone that is part of a cranium." [UBERON:automatic] subset: human_reference_atlas synonym: "cranium bone" EXACT [UBERON:automatic] xref: SCTID:181792001 -is_a: UBERON:0003457 ! head bone +is_a: UBERON:0001474 ! bone element intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0003128 ! cranium relationship: part_of UBERON:0003128 ! cranium @@ -215590,7 +215566,6 @@ xref: VHOG:0000545 xref: Wikipedia:Posterior_nasal_apertures xref: XAO:0000277 is_a: UBERON:0010425 ! internal naris -is_a: UBERON:0036253 ! orifice of skull intersection_of: UBERON:0010425 ! internal naris intersection_of: connects UBERON:0001707 ! nasal cavity intersection_of: connects UBERON:0001728 ! nasopharynx @@ -220593,12 +220568,11 @@ xref: FMA:18930 xref: MA:0001940 xref: SCTID:279659005 xref: Wikipedia:Artery_to_the_ductus_deferens -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery is_a: UBERON:0005156 ! reproductive structure intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001000 ! vas deferens -relationship: branching_part_of UBERON:0001310 {source="FMA"} ! umbilical artery -relationship: branching_part_of UBERON:0001312 {source="Wikipedia"} ! superior vesical artery +relationship: connecting_branch_of UBERON:0001312 {source="Wikipedia"} ! superior vesical artery relationship: part_of UBERON:0005352 ! spermatic cord relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0001000 ! vas deferens @@ -223440,7 +223414,7 @@ xref: MA:0003094 xref: SCTID:244263001 xref: Wikipedia:Common_hepatic_artery is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001640 ! celiac artery +relationship: connecting_branch_of UBERON:0001640 ! celiac artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" xsd:anyURI @@ -223628,7 +223602,7 @@ is_a: UBERON:0001482 ! muscle of shoulder is_a: UBERON:0003897 ! axial muscle is_a: UBERON:0004518 ! muscle of vertebral column is_a: UBERON:0034908 ! scapular muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0002413 ! cervical vertebra intersection_of: attaches_to UBERON:0006849 ! scapula relationship: attaches_to UBERON:0002413 ! cervical vertebra @@ -226412,10 +226386,6 @@ relationship: overlaps UBERON:0006206 ! iridocorneal angle relationship: part_of UBERON:0003956 ! aqueous drainage system relationship: surrounds UBERON:0001766 ! anterior chamber of eyeball property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray870.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" xsd:anyURI @@ -226578,12 +226548,11 @@ subset: pheno_slim xref: EHDAA2:0002208 xref: EMAPA:16207 xref: Wikipedia:Vitelline_arteries -is_a: UBERON:0003513 ! trunk blood vessel +is_a: UBERON:0001637 ! artery is_a: UBERON:0004365 ! vitelline blood vessel -is_a: UBERON:0004573 ! systemic artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001040 ! yolk sac -relationship: branching_part_of UBERON:0005805 {notes="ventral branch"} ! dorsal aorta +relationship: connecting_branch_of UBERON:0005805 {notes="ventral branch"} ! dorsal aorta relationship: supplies UBERON:0001040 ! yolk sac property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png" xsd:anyURI @@ -228097,7 +228066,6 @@ subset: efo_slim synonym: "pll" EXACT [ZFA:0000944] xref: AAO:0011024 xref: EFO:0003595 -xref: HBA:4413 xref: TAO:0000944 xref: XAO:0000465 xref: ZFA:0000944 @@ -228953,9 +228921,9 @@ xref: SCTID:244242003 xref: Wikipedia:Musculophrenic_artery is_a: UBERON:0002057 ! phrenic artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0002456 ! internal thoracic artery +intersection_of: connecting_branch_of UBERON:0002456 ! internal thoracic artery intersection_of: supplies UBERON:0001103 ! diaphragm -relationship: branching_part_of UBERON:0002456 ! internal thoracic artery +relationship: connecting_branch_of UBERON:0002456 ! internal thoracic artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -229555,7 +229523,6 @@ intersection_of: UBERON:0010912 ! subdivision of skeleton intersection_of: skeleton_of UBERON:0000004 ! nose relationship: part_of UBERON:0000004 {source="FMA"} ! nose relationship: part_of UBERON:0003113 {notes="facial series", source="Kardong-abduced"} ! dermatocranium -relationship: part_of UBERON:0011156 ! facial skeleton relationship: skeleton_of UBERON:0000004 ! nose [Term] @@ -232282,6 +232249,7 @@ intersection_of: bounding_layer_of UBERON:0000468 ! multicellular organism intersection_of: develops_from UBERON:0007383 ! enveloping layer of ectoderm relationship: bounding_layer_of UBERON:0000468 ! multicellular organism relationship: develops_from UBERON:0007383 ! enveloping layer of ectoderm +relationship: only_in_taxon NCBITaxon:6072 {source="Wikipedia:Epidermis_(zoology)"} ! Eumetazoa property_value: editor_note "this grouping class exists primarily to align with GO - see GO:0008544." xsd:string [Term] @@ -233730,7 +233698,7 @@ synonym: "pectoral girdle muscle" EXACT [FMA:37347] xref: EMAPA:17748 xref: FMA:37347 is_a: UBERON:0010891 ! pectoral complex muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0001421 ! pectoral girdle region relationship: part_of UBERON:0004471 ! musculature of pectoral girdle property_value: UBPROP:0000012 "EMAPA has both non-skeletal and skeletal types, with the non-skeletal also including a chest muscle, so we place the skeletal class here as the most accurate" xsd:string {external_ontology="EMAPA"} @@ -234852,8 +234820,8 @@ synonym: "superficial fascia muscular layer" EXACT [] xref: EMAPA:18188 xref: MA:0003140 is_a: UBERON:0004253 ! skin muscle -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0002072 ! hypodermis relationship: contributes_to_morphology_of UBERON:0001015 ! musculature relationship: contributes_to_morphology_of UBERON:0002072 ! hypodermis @@ -240887,11 +240855,11 @@ xref: MA:0000759 xref: NCIT:C49775 xref: UMLS:C1710159 {source="ncithesaurus:Splenic_Trabecular_Artery"} xref: Wikipedia:Trabecular_arteries +is_a: UBERON:0001637 ! artery is_a: UBERON:0003497 ! abdomen blood vessel -is_a: UBERON:0004573 ! systemic artery intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0001265 ! trabecula of spleen -relationship: branching_part_of UBERON:0001194 {source="MP"} ! splenic artery +relationship: connecting_branch_of UBERON:0001194 {source="MP"} ! splenic artery relationship: contributes_to_morphology_of UBERON:0002106 ! spleen relationship: part_of UBERON:0001265 ! trabecula of spleen relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -241134,10 +241102,6 @@ xref: Wikipedia:Ciliary_processes is_a: UBERON:0000481 ! multi-tissue structure relationship: part_of UBERON:0001775 ! ciliary body property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" xsd:anyURI @@ -242289,8 +242253,8 @@ xref: AAO:0000218 xref: EMAPA:32634 xref: FMA:9622 xref: MA:0000663 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0010709 ! pelvic complex relationship: part_of UBERON:0014792 {source="prolog"} ! musculature of pelvic complex property_value: UBPROP:0000001 "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000218", ontology="AAO", source="AAO:EJS"} @@ -242309,8 +242273,8 @@ xref: AAO:0010687 xref: EMAPA:32624 xref: FMA:9621 xref: MA:0000615 -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0010708 ! pectoral complex relationship: part_of UBERON:0014793 {source="prolog"} ! musculature of pectoral complex property_value: editor_note "the MA class belongs here, based on its current child classes" xsd:string @@ -242425,7 +242389,6 @@ xref: VHOG:0001143 xref: VSAO:0000184 is_a: UBERON:0004765 {source="VSAO", source="https://github.com/obophenotype/uberon/issues/82"} ! skeletal element relationship: develops_from UBERON:0003089 {source="cjm"} ! sclerotome -relationship: part_of UBERON:0001130 {source="VSAO"} ! vertebral column property_value: IAO:0000232 "we include a distinct subclass for bony vertebra" xsd:string property_value: UBPROP:0000003 "In contrast to lampreys and jawed vertebrates, hagfishes were thought to lack vertebrae. Now, long overlooked vertebral rudiments have been analysed in hagfish, suggesting that vertebrae existed in the last common ancestor of all vertebrates.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001143", ontology="VHOG", source="DOI:10.1016/j.cub.2011.07.014 Janvier P, Comparative anatomy: all vertebrates do have vertebrae. Current Biology (2011)", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "vertebral" xsd:string @@ -242444,8 +242407,8 @@ xref: EMAPA:37688 {source="MA:th"} xref: MA:0002276 xref: NCIT:C52895 is_a: UBERON:0000933 ! chordate pharyngeal muscle -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0001105 ! clavicle bone intersection_of: attaches_to UBERON:0001676 ! occipital bone relationship: attaches_to UBERON:0001105 ! clavicle bone @@ -242463,7 +242426,7 @@ xref: NCIT:C53069 xref: UMLS:C1710196 {source="ncithesaurus:Sternooccipital"} is_a: UBERON:0002377 ! muscle of neck is_a: UBERON:0003897 ! axial muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: has_muscle_insertion UBERON:0001676 ! occipital bone intersection_of: has_muscle_origin UBERON:0000975 ! sternum relationship: has_muscle_insertion UBERON:0001676 ! occipital bone @@ -242488,8 +242451,8 @@ synonym: "muscle of head and neck" RELATED [] synonym: "muscle of head or neck" EXACT [] xref: NCIT:C32716 xref: UMLS:C0448281 {source="ncithesaurus:Head_and_Neck_Muscle"} -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0007811 ! craniocervical region relationship: part_of UBERON:0008229 {source="prolog"} ! craniocervical region musculature @@ -242962,7 +242925,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -243103,6 +243065,7 @@ synonym: "chondrocranium bone" EXACT [MA:0001478] xref: EMAPA:35238 xref: MA:0001478 xref: SCTID:120229002 +is_a: UBERON:0003457 ! head bone is_a: UBERON:0004766 ! cranial bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0001703 ! neurocranium @@ -243987,8 +243950,8 @@ namespace: uberon synonym: "extraembryonic umbilical artery" EXACT [VHOG:0001157] xref: VHOG:0001157 is_a: UBERON:0000478 {source="EHDAA2-abduced"} ! extraembryonic structure -is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0001309 {source="FMA"} ! internal iliac artery +is_a: UBERON:0001637 ! artery +relationship: connecting_branch_of UBERON:0001309 {source="FMA"} ! internal iliac artery relationship: part_of UBERON:0001310 ! umbilical artery relationship: part_of UBERON:0007807 {source="EHDAA2-abduced"} ! connecting stalk vasculature @@ -244499,7 +244462,7 @@ xref: NCIT:C32527 xref: UMLS:C0504096 {source="ncithesaurus:Epimysium"} xref: Wikipedia:Epimysium is_a: UBERON:0011822 {source="FMA"} ! dense irregular connective tissue -relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ +relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: continuous_with UBERON:0000043 ! tendon relationship: part_of UBERON:0001134 {source="FMA"} ! skeletal muscle tissue property_value: UBPROP:0000009 "The Epimysium also protects muscles from friction against other muscles and bones" xsd:string @@ -245698,7 +245661,7 @@ xref: Wikipedia:Deep_cervical_artery is_a: UBERON:0012320 ! cervical artery intersection_of: UBERON:0012320 ! cervical artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0004688 {source="FMA"} ! costo-cervical trunk +relationship: connecting_branch_of UBERON:0004688 {source="FMA"} ! costo-cervical trunk relationship: part_of UBERON:0035551 ! deep vasculature relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -246738,6 +246701,18 @@ intersection_of: part_of UBERON:0000916 ! abdomen property_value: editor_note "TODO mirror representation of abdominal aorta" xsd:string property_value: IAO:0000232 "this class groups all veins that are in the abdomen. The term 'abdominal vein' may have specific meanings in different contexts. The lateral abdominal veins are present in fishes but usually merged or absent in tetrapods; in amphibians, the L&R abdominal veins merge into the ventral abdominal vein" xsd:string +[Term] +id: UBERON:0013127 +name: pulmonary venous system +namespace: uberon +def: "The part of the venous system that drains the lungs[Kardong]." [ISBN:0073040584, Wikipedia:Pulmonary_venous_system] +synonym: "pulmonary venous circulatory system" EXACT [] +xref: Wikipedia:Pulmonary_venous_system +is_a: UBERON:0002049 ! vasculature +relationship: channels_from UBERON:0000102 ! lung vasculature +relationship: part_of UBERON:0004582 ! venous system +property_value: UBPROP:0000001 "Pulmonary circulation is the half portion of the cardiovascular system which carries oxygen-depleted blood away from the heart, to the lungs, and returns oxygenated (oxygen-rich) blood back to the heart. The term pulmonary circulation is readily paired and contrasted with the systemic circulation. A separate system known as the bronchial circulation supplies blood to the tissue of the larger airways of the lung." xsd:string {source="Wikipedia:Pulmonary_circulation"} + [Term] id: UBERON:0013136 name: vein of lip @@ -248883,7 +248858,7 @@ xref: Wikipedia:Deep_auricular_artery is_a: UBERON:0009655 ! auricular artery intersection_of: UBERON:0009655 ! auricular artery intersection_of: part_of UBERON:0035551 ! deep vasculature -relationship: branching_part_of UBERON:0001616 {source="FMA"} ! maxillary artery +relationship: connecting_branch_of UBERON:0001616 {source="FMA"} ! maxillary artery relationship: part_of UBERON:0035551 ! deep vasculature relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0010069 ! outer epithelial layer of tympanic membrane @@ -249208,7 +249183,7 @@ name: pectoral appendage muscle namespace: uberon def: "Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin)." [OBOL:automatic] is_a: UBERON:0010891 ! pectoral complex muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0004710 ! pectoral appendage relationship: part_of UBERON:0007269 {source="prolog"} ! pectoral appendage musculature @@ -249218,7 +249193,7 @@ name: pelvic appendage muscle namespace: uberon def: "Any muscle organ that is part of a pelvic appendage (hindlimb or pelvic fin)." [OBOL:automatic] is_a: UBERON:0010890 ! pelvic complex muscle -intersection_of: UBERON:0014892 ! skeletal muscle organ +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: part_of UBERON:0004709 ! pelvic appendage relationship: part_of UBERON:0007270 {source="prolog"} ! pelvic appendage musculature @@ -249243,7 +249218,7 @@ relationship: part_of UBERON:0002298 ! brainstem [Term] id: UBERON:0014892 -name: skeletal muscle organ +name: skeletal muscle organ, vertebrate namespace: uberon def: "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." [GOC:dos] synonym: "skeletal muscle" BROAD [] @@ -249274,6 +249249,7 @@ intersection_of: surrounded_by UBERON:0011899 ! epimysium intersection_of: synapsed_by CL:0000100 ! motor neuron relationship: composed_primarily_of UBERON:0001134 ! skeletal muscle tissue relationship: develops_from UBERON:0003082 ! myotome +relationship: only_in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of UBERON:0018254 ! skeletal musculature relationship: surrounded_by UBERON:0011899 ! epimysium relationship: synapsed_by CL:0000100 ! motor neuron @@ -250260,8 +250236,7 @@ xref: MA:0003095 xref: SCTID:244262006 xref: Wikipedia:Hepatic_artery_proper is_a: UBERON:0001193 {source="MA"} ! hepatic artery -is_a: UBERON:0004573 ! systemic artery -relationship: branching_part_of UBERON:0005436 {source="FMA"} ! common hepatic artery +relationship: connecting_branch_of UBERON:0005436 {source="FMA"} ! common hepatic artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -251534,7 +251509,7 @@ name: skin bony tubercle namespace: uberon def: "A bony structure embedded in skin, roughly equivalent to osteoderms." [PHENOSCAPE:Nizar] synonym: "bony tubercle" BROAD [] -synonym: "bony tubercles" RELATED OMO:0003004 [UBERONTEMP:3b77fb04-1e62-43af-a84b-5d5eb7388525] +synonym: "bony tubercles" RELATED OMO:0003004 [] is_a: UBERON:0005813 ! tubercle is_a: UBERON:0013703 ! integumentary projection intersection_of: UBERON:0005813 ! tubercle @@ -251830,7 +251805,6 @@ namespace: uberon def: "A rib that is attached to a cervical vertebra." [http://orcid.org/0000-0002-6601-2165] xref: EMAPA:37825 {source="MA:th"} xref: MESH:D057070 -xref: UBERONTEMP:d522e981-3a43-4cab-9862-4344b5c3ff22 is_a: UBERON:0002228 ! rib is_a: UBERON:0003458 ! neck bone intersection_of: UBERON:0002228 ! rib @@ -251976,10 +251950,10 @@ synonym: "thymic branch of internal thoracic artery" EXACT [FMA:10647] xref: FMA:10647 xref: SCTID:76543001 xref: Wikipedia:Thymic_branches_of_internal_thoracic_artery -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0002370 ! thymus -relationship: branching_part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +relationship: connecting_branch_of UBERON:0002456 {source="FMA"} ! internal thoracic artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0002370 ! thymus @@ -252045,7 +252019,7 @@ xref: EHDAA2:0001842 xref: EMAPA:35578 xref: MA:0000165 is_a: UBERON:0000061 ! anatomical structure -relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ +relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: part_of UBERON:0000383 {source="MA"} ! musculature of body property_value: editor_note "Added for consistency with MA EMAPA and EHDAA2. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/104" xsd:string @@ -252059,11 +252033,11 @@ synonym: "jejunal branch of superior mesenteric artery" RELATED [FMA:14808] xref: FMA:14808 xref: SCTID:265391008 xref: Wikipedia:Jejunal_arteries -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001182 ! superior mesenteric artery +intersection_of: connecting_branch_of UBERON:0001182 ! superior mesenteric artery intersection_of: supplies UBERON:0002115 ! jejunum -relationship: branching_part_of UBERON:0001182 ! superior mesenteric artery +relationship: connecting_branch_of UBERON:0001182 ! superior mesenteric artery relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: supplies UBERON:0002115 ! jejunum @@ -252129,7 +252103,6 @@ namespace: uberon def: "Tissue that is part of some adrenal gland." [PHENOSCAPE:Alex] synonym: "adrenal gland tissue" EXACT [ncithesaurus:Adrenal_Gland_Tissue] xref: NCIT:C32051 -xref: UBERONTEMP:a7bf197b-0db2-467e-824e-be45b39e2672 is_a: UBERON:0000479 ! tissue intersection_of: UBERON:0000479 ! tissue intersection_of: part_of UBERON:0002369 ! adrenal gland @@ -252141,7 +252114,6 @@ id: UBERON:0018321 name: foramen for glossopharyngeal nerve namespace: uberon def: "Foramen that allows the passge of the glossopharyngeal nerve (cranial nerve IX)." [PHENOSCAPE:alex] -xref: UBERONTEMP:9ca0bda7-9111-4f59-bc72-5d47bc3d7d61 is_a: UBERON:0013685 ! foramen of skull intersection_of: UBERON:0013685 ! foramen of skull intersection_of: conduit_for UBERON:0001649 ! glossopharyngeal nerve @@ -252153,7 +252125,6 @@ id: UBERON:0018326 name: ilioischiadic foramen namespace: uberon def: "Situated just caudal to the acetabulum, the foramen is bound dorsally by the illium and ventrally by the ischium. The foramen transmitts the ischiadic nerves and vessels (Baumel et al. 1993)." [PHENOSCAPE:alex] -xref: UBERONTEMP:63e09c69-ac98-49ba-b232-2da5c7b19019 is_a: UBERON:0005744 ! bone foramen intersection_of: UBERON:0005744 ! bone foramen intersection_of: conduit_for UBERON:0001322 ! sciatic nerve @@ -252365,8 +252336,8 @@ synonym: "intramuscular fat" RELATED [BTO:0004043] xref: BTO:0004043 is_a: UBERON:0001013 ! adipose tissue intersection_of: UBERON:0001013 ! adipose tissue -intersection_of: part_of UBERON:0014892 ! skeletal muscle organ -relationship: part_of UBERON:0014892 ! skeletal muscle organ +intersection_of: part_of UBERON:0014892 ! skeletal muscle organ, vertebrate +relationship: part_of UBERON:0014892 ! skeletal muscle organ, vertebrate [Term] id: UBERON:0019189 @@ -253519,8 +253490,8 @@ id: UBERON:0034908 name: scapular muscle namespace: uberon def: "Any of the muscles that are responsible for moving the scapula. In humans these are the levator scapulae, the infraspinatus muscle, the teres major, the teres minor, and the supraspinatus muscle." [HPO:curators] -is_a: UBERON:0014892 ! skeletal muscle organ -intersection_of: UBERON:0014892 ! skeletal muscle organ +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate +intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to UBERON:0006849 ! scapula relationship: attaches_to UBERON:0006849 ! scapula @@ -253763,7 +253734,7 @@ namespace: uberon def: "Mesenchyme that is part of a developing jaw [Automatically generated definition]." [OBOL:automatic] xref: EMAPA:32907 xref: EMAPA:35454 -is_a: UBERON:0005253 ! head mesenchyme +is_a: UBERON:0003104 ! mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0011595 ! jaw region relationship: part_of UBERON:0011595 ! jaw region @@ -254186,11 +254157,10 @@ xref: FMA:70506 xref: NCIT:C32837 xref: SCTID:360629008 xref: UMLS:C1182571 -is_a: UBERON:0003496 ! head blood vessel is_a: UBERON:0005396 ! carotid artery segment intersection_of: UBERON:0005396 ! carotid artery segment -intersection_of: branching_part_of UBERON:0001532 ! internal carotid artery -relationship: branching_part_of UBERON:0001532 ! internal carotid artery +intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery [Term] id: UBERON:0035267 @@ -254283,10 +254253,10 @@ xref: FMA:70505 xref: NCIT:C32552 xref: SCTID:244216003 xref: UMLS:C0447038 -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery -intersection_of: branching_part_of UBERON:0001070 ! external carotid artery -relationship: branching_part_of UBERON:0001070 ! external carotid artery +intersection_of: connecting_branch_of UBERON:0001070 ! external carotid artery +relationship: connecting_branch_of UBERON:0001070 ! external carotid artery [Term] id: UBERON:0035401 @@ -255095,7 +255065,6 @@ namespace: uberon def: "Material anatomical entity that forms the outermost boundary of an anatomical structure." [https://github.com/obophenotype/uberon/issues/1324] subset: common_anatomy xref: AAO:0010270 -xref: AEO:0000154 xref: ZFA:0005594 is_a: UBERON:0000465 ! material anatomical entity relationship: bounding_layer_of UBERON:0000061 ! anatomical structure @@ -255772,10 +255741,10 @@ id: UBERON:0039261 name: pancreatic artery namespace: uberon xref: FMA:70471 -is_a: UBERON:0004573 ! systemic artery +is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: supplies UBERON:0001264 ! pancreas -relationship: branching_part_of UBERON:0001194 ! splenic artery +relationship: connecting_branch_of UBERON:0001194 ! splenic artery relationship: supplies UBERON:0001264 ! pancreas [Term] @@ -257192,7 +257161,7 @@ synonym: "arteriole of medulla of lymph node" EXACT [] is_a: UBERON:8410042 ! arteriole of lymph node intersection_of: UBERON:0001980 ! arteriole intersection_of: part_of UBERON:0002007 ! medulla of lymph node -relationship: branching_part_of UBERON:8410034 ! lymph node artery +relationship: connecting_branch_of UBERON:8410034 ! lymph node artery relationship: dc-contributor https://orcid.org/0000-0002-2825-0621 relationship: part_of UBERON:0002007 ! medulla of lymph node relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -257748,7 +257717,6 @@ def: "Blood located in the placenta." [http://orcid.org/0000-0001-6595-0902, htt is_a: UBERON:0000178 ! blood intersection_of: UBERON:0000178 ! blood intersection_of: located_in UBERON:0001987 ! placenta -relationship: dc-contributor https://orcid.org/0000-0002-1773-2692 relationship: located_in UBERON:0001987 ! placenta property_value: dcterms-date "2022-04-04T11:06:09Z" xsd:dateTime @@ -258114,13 +258082,31 @@ id: UBERON:8600021 name: chorionic plate blood vessel namespace: uberon def: "A blood vessel that is part of the chorionic plate." [https://www.ncbi.nlm.nih.gov/books/NBK53254/] +subset: human_reference_atlas is_a: UBERON:0001981 ! blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0004027 ! chorionic plate relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 relationship: part_of UBERON:0004027 ! chorionic plate +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: dcterms-date "2023-09-14T09:09:36Z" xsd:dateTime +[Term] +id: UBERON:8600024 +name: pulmonary venule +namespace: uberon +def: "A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa." [PMID:22283705, PMID:30247823] +is_a: UBERON:0003494 ! respiratory system venule +is_a: UBERON:0003512 ! lung blood vessel +is_a: UBERON:0005194 ! thoracic vein +intersection_of: UBERON:0001979 ! venule +intersection_of: part_of UBERON:0002048 ! lung +relationship: connected_to UBERON:0002016 ! pulmonary vein +relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 +relationship: drains UBERON:0016405 ! pulmonary capillary +relationship: part_of UBERON:0013127 ! pulmonary venous system +property_value: dcterms-date "2023-10-24T11:26:27Z" xsd:dateTime + [Term] id: http://purl.obolibrary.org/obo/D96882F1-8709-49AB-BCA9-772A67EA6C33 name: obsolete D96882F1-8709-49AB-BCA9-772A67EA6C33 @@ -258562,6 +258548,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -259688,6 +259682,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/src/ontology/diffs/cl-diff.md b/src/ontology/diffs/cl-diff.md index 09339114c..13d17eefc 100644 --- a/src/ontology/diffs/cl-diff.md +++ b/src/ontology/diffs/cl-diff.md @@ -2,12 +2,12 @@ ## Left - Ontology IRI: `http://purl.obolibrary.org/obo/cl.owl` -- Version IRI: `http://purl.obolibrary.org/obo/cl/releases/2023-10-19/cl.owl` +- Version IRI: `http://purl.obolibrary.org/obo/cl/releases/2023-12-05/cl.owl` - Loaded from: `http://purl.obolibrary.org/obo/cl.owl` ## Right - Ontology IRI: `http://purl.obolibrary.org/obo/cl.owl` -- Version IRI: `http://purl.obolibrary.org/obo/cl/releases/2023-12-05/cl.owl` +- Version IRI: `http://purl.obolibrary.org/obo/cl/releases/2024-01-04/cl.owl` - Loaded from: `file:/work/src/ontology/../../cl.owl` ### Ontology imports @@ -16,19414 +16,1466 @@ ### Ontology annotations #### Removed -- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2023-10-19" +- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2023-12-05" #### Added -- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2023-12-05" +- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2024-01-04" -### ABBREVIATION `http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION` +### Actinopterygii `http://purl.obolibrary.org/obo/NCBITaxon_7898` #### Removed -- AnnotationProperty: [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) +- [Actinopterygii](http://purl.obolibrary.org/obo/NCBITaxon_7898) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fishes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) +- [Actinopterygii](http://purl.obolibrary.org/obo/NCBITaxon_7898) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fish" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Actinopterygii](http://purl.obolibrary.org/obo/NCBITaxon_7898) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fish" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) +- [Actinopterygii](http://purl.obolibrary.org/obo/NCBITaxon_7898) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fishes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### ADP binding `http://purl.obolibrary.org/obo/GO_0043531` -#### Removed -- [ADP binding](http://purl.obolibrary.org/obo/GO_0043531) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216)) -- [ADP binding](http://purl.obolibrary.org/obo/GO_0043531) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216) +### Ascomycota `http://purl.obolibrary.org/obo/NCBITaxon_4890` +#### Removed +- [Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sac fungi" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [ADP binding](http://purl.obolibrary.org/obo/GO_0043531) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216)) - -- [ADP binding](http://purl.obolibrary.org/obo/GO_0043531) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216) +- [Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sac fungi" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### ATP binding `http://purl.obolibrary.org/obo/GO_0005524` +### Callithrix jacchus `http://purl.obolibrary.org/obo/NCBITaxon_9483` #### Removed -- [ATP binding](http://purl.obolibrary.org/obo/GO_0005524) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) +- [Callithrix jacchus](http://purl.obolibrary.org/obo/NCBITaxon_9483) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "white ear-tufted marmoset" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [ATP binding](http://purl.obolibrary.org/obo/GO_0005524) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) +- [Callithrix jacchus](http://purl.obolibrary.org/obo/NCBITaxon_9483) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "common marmoset" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [ATP binding](http://purl.obolibrary.org/obo/GO_0005524) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) +- [Callithrix jacchus](http://purl.obolibrary.org/obo/NCBITaxon_9483) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "white ear-tufted marmoset" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [ATP binding](http://purl.obolibrary.org/obo/GO_0005524) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) +- [Callithrix jacchus](http://purl.obolibrary.org/obo/NCBITaxon_9483) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "common marmoset" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### Ammon's horn `http://purl.obolibrary.org/obo/UBERON_0001954` +### Cnidaria `http://purl.obolibrary.org/obo/NCBITaxon_6073` #### Removed -- [Ammon's horn](http://purl.obolibrary.org/obo/UBERON_0001954) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray739-emphasizing-hippocampus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [Cnidaria](http://purl.obolibrary.org/obo/NCBITaxon_6073) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "coelenterates" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [Ammon's horn](http://purl.obolibrary.org/obo/UBERON_0001954) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray739-emphasizing-hippocampus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [Cnidaria](http://purl.obolibrary.org/obo/NCBITaxon_6073) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "coelenterates" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### B cell activation `http://purl.obolibrary.org/obo/GO_0042113` +### Deuterostomia `http://purl.obolibrary.org/obo/NCBITaxon_33511` #### Removed -- [B cell activation](http://purl.obolibrary.org/obo/GO_0042113) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) - -- [B cell activation](http://purl.obolibrary.org/obo/GO_0042113) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Deuterostomia](http://purl.obolibrary.org/obo/NCBITaxon_33511) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "deuterostomes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [B cell activation](http://purl.obolibrary.org/obo/GO_0042113) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) - -- [B cell activation](http://purl.obolibrary.org/obo/GO_0042113) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Deuterostomia](http://purl.obolibrary.org/obo/NCBITaxon_33511) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "deuterostomes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### B cell anergy `http://purl.obolibrary.org/obo/GO_0002515` +### Dinosauria `http://purl.obolibrary.org/obo/NCBITaxon_436486` #### Removed -- [B cell anergy](http://purl.obolibrary.org/obo/GO_0002515) EquivalentTo [lymphocyte anergy](http://purl.obolibrary.org/obo/GO_0002249) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) +- [Dinosauria](http://purl.obolibrary.org/obo/NCBITaxon_436486) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dinosaurs" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [B cell anergy](http://purl.obolibrary.org/obo/GO_0002515) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Dinosauria](http://purl.obolibrary.org/obo/NCBITaxon_436486) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dinosaur" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [B cell anergy](http://purl.obolibrary.org/obo/GO_0002515) EquivalentTo [lymphocyte anergy](http://purl.obolibrary.org/obo/GO_0002249) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) +- [Dinosauria](http://purl.obolibrary.org/obo/NCBITaxon_436486) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dinosaurs" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [B cell anergy](http://purl.obolibrary.org/obo/GO_0002515) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Dinosauria](http://purl.obolibrary.org/obo/NCBITaxon_436486) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dinosaur" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### B cell costimulation `http://purl.obolibrary.org/obo/GO_0031296` +### Embryophyta `http://purl.obolibrary.org/obo/NCBITaxon_3193` #### Removed -- [B cell costimulation](http://purl.obolibrary.org/obo/GO_0031296) EquivalentTo [lymphocyte costimulation](http://purl.obolibrary.org/obo/GO_0031294) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [B cell costimulation](http://purl.obolibrary.org/obo/GO_0031296) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "land plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) + +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "higher plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [B cell costimulation](http://purl.obolibrary.org/obo/GO_0031296) EquivalentTo [lymphocyte costimulation](http://purl.obolibrary.org/obo/GO_0031294) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236)) +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) + +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "land plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [B cell costimulation](http://purl.obolibrary.org/obo/GO_0031296) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [B cell](http://purl.obolibrary.org/obo/CL_0000236) +- [Embryophyta](http://purl.obolibrary.org/obo/NCBITaxon_3193) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "higher plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### BEST4+ intestinal epithelial cell, human `http://purl.obolibrary.org/obo/CL_4030026` +### Eukaryota `http://purl.obolibrary.org/obo/NCBITaxon_2759` #### Removed -- [BEST4+ intestinal epithelial cell, human](http://purl.obolibrary.org/obo/CL_4030026) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) +- [Eukaryota](http://purl.obolibrary.org/obo/NCBITaxon_2759) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "eukaryotes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Eukaryota](http://purl.obolibrary.org/obo/NCBITaxon_2759) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "eukaryotes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CCR2 chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031727` +### Eutheria `http://purl.obolibrary.org/obo/NCBITaxon_9347` #### Removed -- [CCR2 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031727) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 2](http://purl.obolibrary.org/obo/PR_000001199)) +- [Eutheria](http://purl.obolibrary.org/obo/NCBITaxon_9347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "placental mammals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [CCR2 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031727) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 2](http://purl.obolibrary.org/obo/PR_000001199) +- [Eutheria](http://purl.obolibrary.org/obo/NCBITaxon_9347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "eutherian mammals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CCR2 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031727) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 2](http://purl.obolibrary.org/obo/PR_000001199)) +- [Eutheria](http://purl.obolibrary.org/obo/NCBITaxon_9347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "eutherian mammals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [CCR2 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031727) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 2](http://purl.obolibrary.org/obo/PR_000001199) +- [Eutheria](http://purl.obolibrary.org/obo/NCBITaxon_9347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "placental mammals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CCR3 chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031728` +### Felis catus `http://purl.obolibrary.org/obo/NCBITaxon_9685` #### Removed -- [CCR3 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031728) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 3](http://purl.obolibrary.org/obo/PR_000001255)) +- [Felis catus](http://purl.obolibrary.org/obo/NCBITaxon_9685) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cat" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [CCR3 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031728) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 3](http://purl.obolibrary.org/obo/PR_000001255) +- [Felis catus](http://purl.obolibrary.org/obo/NCBITaxon_9685) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cats" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CCR3 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031728) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 3](http://purl.obolibrary.org/obo/PR_000001255)) - -- [CCR3 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031728) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 3](http://purl.obolibrary.org/obo/PR_000001255) +- [Felis catus](http://purl.obolibrary.org/obo/NCBITaxon_9685) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cat" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) +- [Felis catus](http://purl.obolibrary.org/obo/NCBITaxon_9685) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cats" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CCR6 chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031731` -#### Removed -- [CCR6 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031731) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 6](http://purl.obolibrary.org/obo/PR_000001202)) -- [CCR6 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031731) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 6](http://purl.obolibrary.org/obo/PR_000001202) +### GCIs #### Added -- [CCR6 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031731) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 6](http://purl.obolibrary.org/obo/PR_000001202)) +- [cranial suture](http://purl.obolibrary.org/obo/UBERON_0003685) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [Mammalia](http://purl.obolibrary.org/obo/NCBITaxon_40674)) SubClassOf [developmentally induced by](http://purl.obolibrary.org/obo/RO_0002256) some [dura mater](http://purl.obolibrary.org/obo/UBERON_0002363) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:16496288" -- [CCR6 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031731) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 6](http://purl.obolibrary.org/obo/PR_000001202) - -### CCR7 chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031732` +### Glaucocystophyceae `http://purl.obolibrary.org/obo/NCBITaxon_38254` #### Removed -- [CCR7 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031732) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 7](http://purl.obolibrary.org/obo/PR_000001203)) - -- [CCR7 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031732) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-C chemokine receptor type 7](http://purl.obolibrary.org/obo/PR_000001203) +- [Glaucocystophyceae](http://purl.obolibrary.org/obo/NCBITaxon_38254) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "glaucocystophytes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CCR7 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031732) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 7](http://purl.obolibrary.org/obo/PR_000001203)) +- [Glaucocystophyceae](http://purl.obolibrary.org/obo/NCBITaxon_38254) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "glaucocystophytes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [CCR7 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031732) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-C chemokine receptor type 7](http://purl.obolibrary.org/obo/PR_000001203) - -### CD34-positive, CD38-negative hematopoietic stem cell `http://purl.obolibrary.org/obo/CL_0001024` +### Hominoidea `http://purl.obolibrary.org/obo/NCBITaxon_314295` #### Removed -- [CD34-positive, CD38-negative hematopoietic stem cell](http://purl.obolibrary.org/obo/CL_0001024) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:86475" +- [Hominoidea](http://purl.obolibrary.org/obo/NCBITaxon_314295) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ape" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Hominoidea](http://purl.obolibrary.org/obo/NCBITaxon_314295) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ape" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CD4-positive, alpha-beta T cell activation `http://purl.obolibrary.org/obo/GO_0035710` +### Homo `http://purl.obolibrary.org/obo/NCBITaxon_9605` #### Removed -- [CD4-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0035710) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CD4-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000624)) - -- [CD4-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0035710) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CD4-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000624) +- [Homo](http://purl.obolibrary.org/obo/NCBITaxon_9605) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "humans" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CD4-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0035710) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CD4-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000624)) - -- [CD4-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0035710) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CD4-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000624) +- [Homo](http://purl.obolibrary.org/obo/NCBITaxon_9605) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "humans" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CD8-positive, alpha-beta T cell activation `http://purl.obolibrary.org/obo/GO_0036037` +### Magnoliopsida `http://purl.obolibrary.org/obo/NCBITaxon_3398` #### Removed -- [CD8-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0036037) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CD8-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000625)) - -- [CD8-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0036037) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CD8-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000625) +- [Magnoliopsida](http://purl.obolibrary.org/obo/NCBITaxon_3398) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "angiosperms" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CD8-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0036037) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CD8-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000625)) - -- [CD8-positive, alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0036037) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CD8-positive, alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000625) +- [Magnoliopsida](http://purl.obolibrary.org/obo/NCBITaxon_3398) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "angiosperms" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CD8-positive, alpha-beta cytotoxic T cell `http://purl.obolibrary.org/obo/CL_0000794` +### Mandibulata `http://purl.obolibrary.org/obo/NCBITaxon_197563` #### Removed -- [CD8-positive, alpha-beta cytotoxic T cell](http://purl.obolibrary.org/obo/CL_0000794) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:70573" +- [Mandibulata](http://purl.obolibrary.org/obo/NCBITaxon_197563) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mandibulates" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Mandibulata](http://purl.obolibrary.org/obo/NCBITaxon_197563) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mandibulates" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### CX3C chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031737` +### Metazoa `http://purl.obolibrary.org/obo/NCBITaxon_33208` #### Removed -- [CX3C chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031737) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CX3C chemokine receptor 1](http://purl.obolibrary.org/obo/PR_000001206)) - -- [CX3C chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031737) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CX3C chemokine receptor 1](http://purl.obolibrary.org/obo/PR_000001206) +- [Metazoa](http://purl.obolibrary.org/obo/NCBITaxon_33208) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "multicellular animals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CX3C chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031737) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CX3C chemokine receptor 1](http://purl.obolibrary.org/obo/PR_000001206)) +- [Metazoa](http://purl.obolibrary.org/obo/NCBITaxon_33208) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "multicellular animals" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [CX3C chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031737) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CX3C chemokine receptor 1](http://purl.obolibrary.org/obo/PR_000001206) - -### CXCR4 chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0031723` +### Mus `http://purl.obolibrary.org/obo/NCBITaxon_10088` #### Removed -- [CXCR4 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031723) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-X-C chemokine receptor type 4](http://purl.obolibrary.org/obo/PR_000001208)) +- [Mus ](http://purl.obolibrary.org/obo/NCBITaxon_10088) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mice" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [CXCR4 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031723) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [C-X-C chemokine receptor type 4](http://purl.obolibrary.org/obo/PR_000001208) +- [Mus ](http://purl.obolibrary.org/obo/NCBITaxon_10088) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mouse" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [CXCR4 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031723) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-X-C chemokine receptor type 4](http://purl.obolibrary.org/obo/PR_000001208)) +- [Mus ](http://purl.obolibrary.org/obo/NCBITaxon_10088) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mice" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [CXCR4 chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0031723) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [C-X-C chemokine receptor type 4](http://purl.obolibrary.org/obo/PR_000001208) +- [Mus ](http://purl.obolibrary.org/obo/NCBITaxon_10088) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mouse" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### DNA binding `http://purl.obolibrary.org/obo/GO_0003677` +### Mus musculus `http://purl.obolibrary.org/obo/NCBITaxon_10090` #### Removed -- [DNA binding](http://purl.obolibrary.org/obo/GO_0003677) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991)) - -- [DNA binding](http://purl.obolibrary.org/obo/GO_0003677) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991) +- [Mus musculus](http://purl.obolibrary.org/obo/NCBITaxon_10090) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mouse" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [DNA binding](http://purl.obolibrary.org/obo/GO_0003677) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991)) +- [Mus musculus](http://purl.obolibrary.org/obo/NCBITaxon_10090) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mouse" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [DNA binding](http://purl.obolibrary.org/obo/GO_0003677) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991) - -### G protein-coupled ADP receptor activity `http://purl.obolibrary.org/obo/GO_0001621` +### Nematoda `http://purl.obolibrary.org/obo/NCBITaxon_6231` #### Removed -- [G protein-coupled ADP receptor activity](http://purl.obolibrary.org/obo/GO_0001621) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216)) +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "roundworm" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) + +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nematodes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [G protein-coupled ADP receptor activity](http://purl.obolibrary.org/obo/GO_0001621) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216) +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nematode" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [G protein-coupled ADP receptor activity](http://purl.obolibrary.org/obo/GO_0001621) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216)) +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nematode" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [G protein-coupled ADP receptor activity](http://purl.obolibrary.org/obo/GO_0001621) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_456216](http://purl.obolibrary.org/obo/CHEBI_456216) +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nematodes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) +- [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "roundworm" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### G protein-coupled ATP receptor activity `http://purl.obolibrary.org/obo/GO_0045031` -#### Removed -- [G protein-coupled ATP receptor activity](http://purl.obolibrary.org/obo/GO_0045031) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) -- [G protein-coupled ATP receptor activity](http://purl.obolibrary.org/obo/GO_0045031) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) +### OMO_0003003 `http://purl.obolibrary.org/obo/OMO_0003003` #### Added -- [G protein-coupled ATP receptor activity](http://purl.obolibrary.org/obo/GO_0045031) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) +- AnnotationProperty: [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [G protein-coupled ATP receptor activity](http://purl.obolibrary.org/obo/GO_0045031) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) +- [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) -### G protein-coupled acetylcholine receptor activity `http://purl.obolibrary.org/obo/GO_0016907` +### Platyhelminthes `http://purl.obolibrary.org/obo/NCBITaxon_6157` #### Removed -- [G protein-coupled acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0016907) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [Platyhelminthes](http://purl.obolibrary.org/obo/NCBITaxon_6157) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "flatworm" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [G protein-coupled acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0016907) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [Platyhelminthes](http://purl.obolibrary.org/obo/NCBITaxon_6157) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "flatworm" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### G protein-coupled amine receptor activity `http://purl.obolibrary.org/obo/GO_0008227` +### Platyrrhini `http://purl.obolibrary.org/obo/NCBITaxon_9479` #### Removed -- [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) +- [Platyrrhini](http://purl.obolibrary.org/obo/NCBITaxon_9479) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "monkeys" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) +- [Platyrrhini](http://purl.obolibrary.org/obo/NCBITaxon_9479) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "monkey" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) +- [Platyrrhini](http://purl.obolibrary.org/obo/NCBITaxon_9479) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "monkey" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) +- [Platyrrhini](http://purl.obolibrary.org/obo/NCBITaxon_9479) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "monkeys" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### G protein-coupled glutamate receptor activity `http://purl.obolibrary.org/obo/GO_0098988` -#### Removed -- [G protein-coupled glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0098988) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) +### Rhabditida `http://purl.obolibrary.org/obo/NCBITaxon_6236` #### Added -- [G protein-coupled glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0098988) EquivalentTo [G protein-coupled receptor activity](http://purl.obolibrary.org/obo/GO_0004930) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) +- [Rhabditida](http://purl.obolibrary.org/obo/NCBITaxon_6236) [has_alternative_id](http://www.geneontology.org/formats/oboInOwl#hasAlternativeId) "NCBITaxon:6308" +- [Rhabditida](http://purl.obolibrary.org/obo/NCBITaxon_6236) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "Strongylida" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [synonym](http://purl.obolibrary.org/obo/ncbitaxon#synonym) -### G protein-coupled serotonin receptor activity `http://purl.obolibrary.org/obo/GO_0004993` + +### Saccharomyces cerevisiae `http://purl.obolibrary.org/obo/NCBITaxon_4932` #### Removed -- [G protein-coupled serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0004993) EquivalentTo [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "baker's yeast" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [genbank_common_name](http://purl.obolibrary.org/obo/ncbitaxon#genbank_common_name) + +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brewer's yeast" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [G protein-coupled serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0004993) SubClassOf [serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0099589) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "S. cerevisiae" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [G protein-coupled serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0004993) EquivalentTo [G protein-coupled amine receptor activity](http://purl.obolibrary.org/obo/GO_0008227) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "Saccharomyces diastaticus" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [synonym](http://purl.obolibrary.org/obo/ncbitaxon#synonym) -- [G protein-coupled serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0004993) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "Saccharomyces cerevisiae 'var. diastaticus'" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [equivalent_name](http://purl.obolibrary.org/obo/ncbitaxon#equivalent_name) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "baker's yeast" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### G protein-coupled serotonin receptor complex `http://purl.obolibrary.org/obo/GO_0098666` -#### Removed -- [G protein-coupled serotonin receptor complex](http://purl.obolibrary.org/obo/GO_0098666) SubClassOf [serotonin receptor complex](http://purl.obolibrary.org/obo/GO_0098665) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has_alternative_id](http://www.geneontology.org/formats/oboInOwl#hasAlternativeId) "NCBITaxon:41870" -#### Added -- [G protein-coupled serotonin receptor complex](http://purl.obolibrary.org/obo/GO_0098666) SubClassOf [receptor complex](http://purl.obolibrary.org/obo/GO_0043235) +- [Saccharomyces cerevisiae](http://purl.obolibrary.org/obo/NCBITaxon_4932) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brewer's yeast" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [genbank_common_name](http://purl.obolibrary.org/obo/ncbitaxon#genbank_common_name) -### G protein-coupled serotonin receptor signaling pathway `http://purl.obolibrary.org/obo/GO_0098664` +### Spermatophyta `http://purl.obolibrary.org/obo/NCBITaxon_58024` #### Removed -- [G protein-coupled serotonin receptor signaling pathway](http://purl.obolibrary.org/obo/GO_0098664) SubClassOf [serotonin receptor signaling pathway](http://purl.obolibrary.org/obo/GO_0007210) +- [Spermatophyta](http://purl.obolibrary.org/obo/NCBITaxon_58024) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "seed plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Spermatophyta](http://purl.obolibrary.org/obo/NCBITaxon_58024) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "seed plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### GABA receptor activity `http://purl.obolibrary.org/obo/GO_0016917` +### Tracheophyta `http://purl.obolibrary.org/obo/NCBITaxon_58023` #### Removed -- [GABA receptor activity](http://purl.obolibrary.org/obo/GO_0016917) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59888](http://purl.obolibrary.org/obo/CHEBI_59888)) - -- [GABA receptor activity](http://purl.obolibrary.org/obo/GO_0016917) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59888](http://purl.obolibrary.org/obo/CHEBI_59888) +- [Tracheophyta](http://purl.obolibrary.org/obo/NCBITaxon_58023) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vascular plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [GABA receptor activity](http://purl.obolibrary.org/obo/GO_0016917) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59888](http://purl.obolibrary.org/obo/CHEBI_59888)) +- [Tracheophyta](http://purl.obolibrary.org/obo/NCBITaxon_58023) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vascular plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -- [GABA receptor activity](http://purl.obolibrary.org/obo/GO_0016917) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59888](http://purl.obolibrary.org/obo/CHEBI_59888) - -### GABAergic amacrine cell `http://purl.obolibrary.org/obo/CL_4030027` +### Viridiplantae `http://purl.obolibrary.org/obo/NCBITaxon_33090` #### Removed -- [GABAergic amacrine cell](http://purl.obolibrary.org/obo/CL_4030027) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) +- [Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "green plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) +#### Added +- [Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "green plants" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### GCIs +### Zygnemophyceae `http://purl.obolibrary.org/obo/NCBITaxon_131209` #### Removed -- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) and ([in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Mammalia](http://purl.obolibrary.org/obo/NCBITaxon_40674)) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [neck](http://purl.obolibrary.org/obo/UBERON_0000974) +- [Zygnemophyceae](http://purl.obolibrary.org/obo/NCBITaxon_131209) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "gamophytes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) #### Added -- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) and ([in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Sarcopterygii](http://purl.obolibrary.org/obo/NCBITaxon_8287)) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [neck](http://purl.obolibrary.org/obo/UBERON_0000974) +- [Zygnemophyceae](http://purl.obolibrary.org/obo/NCBITaxon_131209) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "gamophytes" + - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003003](http://purl.obolibrary.org/obo/OMO_0003003) -### Golgi vesicle budding `http://purl.obolibrary.org/obo/GO_0048194` +### adrenal tissue `http://purl.obolibrary.org/obo/UBERON_0018303` #### Removed -- [Golgi vesicle budding](http://purl.obolibrary.org/obo/GO_0048194) EquivalentTo [vesicle budding from membrane](http://purl.obolibrary.org/obo/GO_0006900) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [Golgi membrane](http://purl.obolibrary.org/obo/GO_0000139)) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [Golgi-associated vesicle](http://purl.obolibrary.org/obo/GO_0005798)) +- [adrenal tissue](http://purl.obolibrary.org/obo/UBERON_0018303) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:a7bf197b-0db2-467e-824e-be45b39e2672" + -- [Golgi vesicle budding](http://purl.obolibrary.org/obo/GO_0048194) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [Golgi-associated vesicle](http://purl.obolibrary.org/obo/GO_0005798) + +### anatomical entity `http://purl.obolibrary.org/obo/UBERON_0001062` #### Added -- [Golgi vesicle budding](http://purl.obolibrary.org/obo/GO_0048194) EquivalentTo [vesicle budding from membrane](http://purl.obolibrary.org/obo/GO_0006900) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [Golgi membrane](http://purl.obolibrary.org/obo/GO_0000139)) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [Golgi-associated vesicle](http://purl.obolibrary.org/obo/GO_0005798)) +- [anatomical entity](http://purl.obolibrary.org/obo/UBERON_0001062) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BFO:0000004" + + +### anatomical surface region `http://purl.obolibrary.org/obo/UBERON_0036215` +#### Removed +- [anatomical surface region](http://purl.obolibrary.org/obo/UBERON_0036215) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AEO:0000154" -- [Golgi vesicle budding](http://purl.obolibrary.org/obo/GO_0048194) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [Golgi-associated vesicle](http://purl.obolibrary.org/obo/GO_0005798) -### His-Purkinje system `http://purl.obolibrary.org/obo/UBERON_0004146` +### artery of lower lip `http://purl.obolibrary.org/obo/UBERON_0003471` #### Removed -- [His-Purkinje system](http://purl.obolibrary.org/obo/UBERON_0004146) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "HPS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) +- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [His-Purkinje system](http://purl.obolibrary.org/obo/UBERON_0004146) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "HPS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### IAO_0000232 `http://www.geneontology.org/formats/oboInOwl#http://purl.obolibrary.org/obo/IAO_0000232` +### artery of upper lip `http://purl.obolibrary.org/obo/UBERON_0003470` #### Removed -- AnnotationProperty: [IAO_0000232](http://www.geneontology.org/formats/oboInOwl#http://purl.obolibrary.org/obo/IAO_0000232) +- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" +#### Added +- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### L5/6 near-projecting glutamatergic neuron `http://purl.obolibrary.org/obo/CL_4030067` +### axial skeletal system `http://purl.obolibrary.org/obo/UBERON_0011137` +#### Removed +- [axial skeletal system](http://purl.obolibrary.org/obo/UBERON_0011137) SubClassOf [has part](http://purl.obolibrary.org/obo/BFO_0000051) some [axial skeleton plus cranial skeleton](http://purl.obolibrary.org/obo/UBERON_0005944) -#### Added -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "L5/6 NP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:34004146" -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) [date](http://purl.org/dc/terms/date) "2023-11-17T11:35:06Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +### axillary artery `http://purl.obolibrary.org/obo/UBERON_0001394` -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A near-projecting glutamatergic neuron with a soma found in cortical layer 5/6." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:37292694" +#### Added +- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:34004146" -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) [label](http://www.w3.org/2000/01/rdf-schema#label) "L5/6 near-projecting glutamatergic neuron" +### branch of external carotid artery `http://purl.obolibrary.org/obo/UBERON_0035398` +#### Removed +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) [contributor](http://purl.org/dc/terms/contributor) [0000-0003-4389-9821](https://orcid.org/0000-0003-4389-9821) +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) -- Class: [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070) -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) EquivalentTo [near-projecting glutamatergic cortical neuron](http://purl.obolibrary.org/obo/CL_4023012) and ([has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [cortical layer V/VI](http://purl.obolibrary.org/obo/UBERON_8440002)) +#### Added +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) SubClassOf [near-projecting glutamatergic cortical neuron](http://purl.obolibrary.org/obo/CL_4023012) +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070) -- [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) SubClassOf [has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [cortical layer V/VI](http://purl.obolibrary.org/obo/UBERON_8440002) +- [branch of external carotid artery](http://purl.obolibrary.org/obo/UBERON_0035398) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### L5/6 near-projecting glutamatergic neuron of the primary motor cortex `http://purl.obolibrary.org/obo/CL_4023043` +### branch of internal carotid artery `http://purl.obolibrary.org/obo/UBERON_0035237` #### Removed -- [L5/6 near-projecting glutamatergic neuron of the primary motor cortex](http://purl.obolibrary.org/obo/CL_4023043) EquivalentTo [near-projecting glutamatergic cortical neuron](http://purl.obolibrary.org/obo/CL_4023012) and ([has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [primary motor cortex](http://purl.obolibrary.org/obo/UBERON_0001384)) and ([has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [cortical layer V/VI](http://purl.obolibrary.org/obo/UBERON_8440002)) +- [branch of internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0035237) EquivalentTo [carotid artery segment](http://purl.obolibrary.org/obo/UBERON_0005396) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) -- [L5/6 near-projecting glutamatergic neuron of the primary motor cortex](http://purl.obolibrary.org/obo/CL_4023043) SubClassOf [has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [cortical layer V/VI](http://purl.obolibrary.org/obo/UBERON_8440002) +- [branch of internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0035237) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) -- [L5/6 near-projecting glutamatergic neuron of the primary motor cortex](http://purl.obolibrary.org/obo/CL_4023043) SubClassOf [near-projecting glutamatergic cortical neuron](http://purl.obolibrary.org/obo/CL_4023012) +- [branch of internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0035237) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496) #### Added -- [L5/6 near-projecting glutamatergic neuron of the primary motor cortex](http://purl.obolibrary.org/obo/CL_4023043) EquivalentTo [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) and ([has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [primary motor cortex](http://purl.obolibrary.org/obo/UBERON_0001384)) +- [branch of internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0035237) EquivalentTo [carotid artery segment](http://purl.obolibrary.org/obo/UBERON_0005396) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) -- [L5/6 near-projecting glutamatergic neuron of the primary motor cortex](http://purl.obolibrary.org/obo/CL_4023043) SubClassOf [L5/6 near-projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030067) +- [branch of internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0035237) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) -### L6 intratelencephalic projecting Car3 glutamatergic neuron `http://purl.obolibrary.org/obo/CL_4030068` +### bronchus `http://purl.obolibrary.org/obo/UBERON_0002185` +#### Removed +- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 6 that expresses Car3." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1016/j.cell.2021.04.021" +- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.06.515349" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.30.518285" -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [date](http://purl.org/dc/terms/date) "2023-11-23T09:16:14Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +### caudal artery `http://purl.obolibrary.org/obo/UBERON_0003086` +#### Removed +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [post-anal tail](http://purl.obolibrary.org/obo/UBERON_0007812)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805)) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [contributor](http://purl.org/dc/terms/contributor) [0000-0003-4389-9821](https://orcid.org/0000-0003-4389-9821) +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "L6 IT Car3" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) SubClassOf [trunk blood vessel](http://purl.obolibrary.org/obo/UBERON_0003513) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.06.515349" +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "L6-IT-Car3" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +#### Added +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [post-anal tail](http://purl.obolibrary.org/obo/UBERON_0007812)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805)) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.30.518285" +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [label](http://www.w3.org/2000/01/rdf-schema#label) "L6 intratelencephalic projecting Car3 glutamatergic neuron" +- [caudal artery](http://purl.obolibrary.org/obo/UBERON_0003086) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "L6 IT Car3 glutamatergic neuron" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [0000-0003-4389-9821](https://orcid.org/0000-0003-4389-9821) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +### cavernous artery `http://purl.obolibrary.org/obo/UBERON_0000457` +#### Removed +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "L6-IT-Car3 cell" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.30.518285" +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "L6 IT Car3 neuron" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2022.11.06.515349" +#### Added +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) -- Class: [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) EquivalentTo [L6 intratelencephalic projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030065) and ([has soma location](http://purl.obolibrary.org/obo/RO_0002100) some [cortical layer VI](http://purl.obolibrary.org/obo/UBERON_0005395)) and ([expresses](http://purl.obolibrary.org/obo/RO_0002292) some [PR_000004919](http://purl.obolibrary.org/obo/PR_000004919)) +- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) SubClassOf [expresses](http://purl.obolibrary.org/obo/RO_0002292) some [PR_000004919](http://purl.obolibrary.org/obo/PR_000004919) -- [L6 intratelencephalic projecting Car3 glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030068) SubClassOf [L6 intratelencephalic projecting glutamatergic neuron](http://purl.obolibrary.org/obo/CL_4030065) +### cervical rib `http://purl.obolibrary.org/obo/UBERON_0018144` +#### Removed +- [cervical rib](http://purl.obolibrary.org/obo/UBERON_0018144) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:d522e981-3a43-4cab-9862-4344b5c3ff22" -### MHC class II protein complex binding `http://purl.obolibrary.org/obo/GO_0023026` -#### Removed -- [MHC class II protein complex binding](http://purl.obolibrary.org/obo/GO_0023026) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [MHC class II protein complex](http://purl.obolibrary.org/obo/GO_0042613)) -- [MHC class II protein complex binding](http://purl.obolibrary.org/obo/GO_0023026) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [MHC class II protein complex](http://purl.obolibrary.org/obo/GO_0042613) +### chorionic plate blood vessel `http://purl.obolibrary.org/obo/UBERON_8600021` #### Added -- [MHC class II protein complex binding](http://purl.obolibrary.org/obo/GO_0023026) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [MHC class II protein complex](http://purl.obolibrary.org/obo/GO_0042613)) +- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [MHC class II protein complex binding](http://purl.obolibrary.org/obo/GO_0023026) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [MHC class II protein complex](http://purl.obolibrary.org/obo/GO_0042613) +- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -### MHC protein complex binding `http://purl.obolibrary.org/obo/GO_0023023` +### ciliary processes `http://purl.obolibrary.org/obo/UBERON_0010427` #### Removed -- [MHC protein complex binding](http://purl.obolibrary.org/obo/GO_0023023) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [MHC protein complex](http://purl.obolibrary.org/obo/GO_0042611)) +- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [MHC protein complex binding](http://purl.obolibrary.org/obo/GO_0023023) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [MHC protein complex](http://purl.obolibrary.org/obo/GO_0042611) +- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [MHC protein complex binding](http://purl.obolibrary.org/obo/GO_0023023) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [MHC protein complex](http://purl.obolibrary.org/obo/GO_0042611)) +- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [MHC protein complex binding](http://purl.obolibrary.org/obo/GO_0023023) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [MHC protein complex](http://purl.obolibrary.org/obo/GO_0042611) +- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### Malpighian tubule `http://purl.obolibrary.org/obo/UBERON_0001054` -#### Removed -- [Malpighian tubule](http://purl.obolibrary.org/obo/UBERON_0001054) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "this will be ceded to the Arthropod Anatomy Ontology" + +### committed double negative thymocyte (Homo sapiens) `http://purl.obolibrary.org/obo/CL_0009082` #### Added -- [Malpighian tubule](http://purl.obolibrary.org/obo/UBERON_0001054) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE this will be ceded to the Arthropod Anatomy Ontology" +- [committed double negative thymocyte (Homo sapiens)](http://purl.obolibrary.org/obo/CL_0009082) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -### Mullerian duct `http://purl.obolibrary.org/obo/UBERON_0003890` +### common hepatic artery `http://purl.obolibrary.org/obo/UBERON_0005436` #### Removed -- [Mullerian duct](http://purl.obolibrary.org/obo/UBERON_0003890) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) #### Added -- [Mullerian duct](http://purl.obolibrary.org/obo/UBERON_0003890) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) -### NF-kappaB binding `http://purl.obolibrary.org/obo/GO_0051059` +### common_name `http://purl.obolibrary.org/obo/ncbitaxon#common_name` #### Removed -- [NF-kappaB binding](http://purl.obolibrary.org/obo/GO_0051059) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [transcription factor NF-kappa-B subunit](http://purl.obolibrary.org/obo/PR_000001753)) - -- [NF-kappaB binding](http://purl.obolibrary.org/obo/GO_0051059) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [transcription factor NF-kappa-B subunit](http://purl.obolibrary.org/obo/PR_000001753) - -#### Added -- [NF-kappaB binding](http://purl.obolibrary.org/obo/GO_0051059) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [transcription factor NF-kappa-B subunit](http://purl.obolibrary.org/obo/PR_000001753)) +- AnnotationProperty: [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) -- [NF-kappaB binding](http://purl.obolibrary.org/obo/GO_0051059) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [transcription factor NF-kappa-B subunit](http://purl.obolibrary.org/obo/PR_000001753) +- [common_name](http://purl.obolibrary.org/obo/ncbitaxon#common_name) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) -### NK T cell activation `http://purl.obolibrary.org/obo/GO_0051132` -#### Removed -- [NK T cell activation](http://purl.obolibrary.org/obo/GO_0051132) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [mature NK T cell](http://purl.obolibrary.org/obo/CL_0000814)) -- [NK T cell activation](http://purl.obolibrary.org/obo/GO_0051132) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [mature NK T cell](http://purl.obolibrary.org/obo/CL_0000814) +### connecting branch of `http://purl.obolibrary.org/obo/RO_0002252` #### Added -- [NK T cell activation](http://purl.obolibrary.org/obo/GO_0051132) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mature NK T cell](http://purl.obolibrary.org/obo/CL_0000814)) +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [RO_0004036](http://purl.obolibrary.org/obo/RO_0004036) [part_of](http://purl.obolibrary.org/obo/BFO_0000050) -- [NK T cell activation](http://purl.obolibrary.org/obo/GO_0051132) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mature NK T cell](http://purl.obolibrary.org/obo/CL_0000814) +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) [2212](https://github.com/obophenotype/uberon/issues/2212) -### P/D1 enteroendocrine cell `http://purl.obolibrary.org/obo/CL_0002268` -#### Removed -- [P/D1 enteroendocrine cell](http://purl.obolibrary.org/obo/CL_0002268) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:63207" +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [IAO_0000112](http://purl.obolibrary.org/obo/IAO_0000112) "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "RO:0002252" -### PLURAL `http://purl.obolibrary.org/obo/uberon/core#PLURAL` -#### Removed -- AnnotationProperty: [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [label](http://www.w3.org/2000/01/rdf-schema#label) "connecting branch of" -- [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [shorthand](http://www.geneontology.org/formats/oboInOwl#shorthand) "connecting_branch_of" +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) [id](http://www.geneontology.org/formats/oboInOwl#id) "connecting_branch_of" +- ObjectProperty: [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) -### PR_000004919 `http://purl.obolibrary.org/obo/PR_000004919` +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) InverseOf [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) -#### Added -- Class: [PR_000004919](http://purl.obolibrary.org/obo/PR_000004919) +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) SubPropertyOf: [connected to](http://purl.obolibrary.org/obo/RO_0002170) + +- [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) SubPropertyOf: [in branching relationship with](http://purl.obolibrary.org/obo/RO_0002375) -### Peyer's patch `http://purl.obolibrary.org/obo/UBERON_0001211` +### corpus luteum `http://purl.obolibrary.org/obo/UBERON_0002512` #### Removed -- [Peyer's patch](http://purl.obolibrary.org/obo/UBERON_0001211) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lamina propria](http://purl.obolibrary.org/obo/UBERON_0000030) - - [editor_note](http://www.geneontology.org/formats/oboInOwl#editor_note) "check this" +- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Mammalia](http://purl.obolibrary.org/obo/NCBITaxon_40674) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" #### Added -- [Peyer's patch](http://purl.obolibrary.org/obo/UBERON_0001211) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lamina propria](http://purl.obolibrary.org/obo/UBERON_0000030) - - [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE check this" +- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Vertebrata ](http://purl.obolibrary.org/obo/NCBITaxon_7742) -### Purkinje myocyte to ventricular cardiac muscle cell signaling `http://purl.obolibrary.org/obo/GO_0086029` +### cranial bone `http://purl.obolibrary.org/obo/UBERON_0004766` +#### Removed +- [cranial bone](http://purl.obolibrary.org/obo/UBERON_0004766) SubClassOf [head bone](http://purl.obolibrary.org/obo/UBERON_0003457) #### Added -- [Purkinje myocyte to ventricular cardiac muscle cell signaling](http://purl.obolibrary.org/obo/GO_0086029) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [Purkinje myocyte](http://purl.obolibrary.org/obo/CL_0002068)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [ventricular cardiac muscle cell](http://purl.obolibrary.org/obo/CL_2000046)) +- [cranial bone](http://purl.obolibrary.org/obo/UBERON_0004766) SubClassOf [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) + -- [Purkinje myocyte to ventricular cardiac muscle cell signaling](http://purl.obolibrary.org/obo/GO_0086029) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [Purkinje myocyte](http://purl.obolibrary.org/obo/CL_0002068) +### cranial suture `http://purl.obolibrary.org/obo/UBERON_0003685` +#### Removed +- [cranial suture](http://purl.obolibrary.org/obo/UBERON_0003685) SubClassOf [developmentally induced by](http://purl.obolibrary.org/obo/RO_0002256) some [dura mater](http://purl.obolibrary.org/obo/UBERON_0002363) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:16496288" -- [Purkinje myocyte to ventricular cardiac muscle cell signaling](http://purl.obolibrary.org/obo/GO_0086029) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [ventricular cardiac muscle cell](http://purl.obolibrary.org/obo/CL_2000046) -### RNA binding `http://purl.obolibrary.org/obo/GO_0003723` +### cranium `http://purl.obolibrary.org/obo/UBERON_0003128` #### Removed -- [RNA binding](http://purl.obolibrary.org/obo/GO_0003723) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697)) - -- [RNA binding](http://purl.obolibrary.org/obo/GO_0003723) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697) +- [cranium](http://purl.obolibrary.org/obo/UBERON_0003128) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [skull](http://purl.obolibrary.org/obo/UBERON_0003129) #### Added -- [RNA binding](http://purl.obolibrary.org/obo/GO_0003723) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697)) +- [cranium](http://purl.obolibrary.org/obo/UBERON_0003128) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_7762](http://purl.obolibrary.org/obo/NCBITaxon_7762) -- [RNA binding](http://purl.obolibrary.org/obo/GO_0003723) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697) + +### deep auricular artery `http://purl.obolibrary.org/obo/UBERON_0014695` +#### Removed +- [deep auricular artery](http://purl.obolibrary.org/obo/UBERON_0014695) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [deep auricular artery](http://purl.obolibrary.org/obo/UBERON_0014695) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### S-shaped body `http://purl.obolibrary.org/obo/UBERON_0004199` +### deep cervical artery `http://purl.obolibrary.org/obo/UBERON_0012321` #### Removed -- [S-shaped body](http://purl.obolibrary.org/obo/UBERON_0004199) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "SSB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) +- [deep cervical artery](http://purl.obolibrary.org/obo/UBERON_0012321) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [costo-cervical trunk](http://purl.obolibrary.org/obo/UBERON_0004688) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [S-shaped body](http://purl.obolibrary.org/obo/UBERON_0004199) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "SSB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [deep cervical artery](http://purl.obolibrary.org/obo/UBERON_0012321) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [costo-cervical trunk](http://purl.obolibrary.org/obo/UBERON_0004688) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### T cell activation `http://purl.obolibrary.org/obo/GO_0042110` +### deep femoral artery `http://purl.obolibrary.org/obo/UBERON_0001355` #### Removed -- [T cell activation](http://purl.obolibrary.org/obo/GO_0042110) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060)) + +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) -- [T cell activation](http://purl.obolibrary.org/obo/GO_0042110) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [T cell activation](http://purl.obolibrary.org/obo/GO_0042110) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060)) -- [T cell activation](http://purl.obolibrary.org/obo/GO_0042110) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) +- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### T cell anergy `http://purl.obolibrary.org/obo/GO_0002870` + +### deferent duct artery `http://purl.obolibrary.org/obo/UBERON_0005192` #### Removed -- [T cell anergy](http://purl.obolibrary.org/obo/GO_0002870) EquivalentTo [lymphocyte anergy](http://purl.obolibrary.org/obo/GO_0002249) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) +- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" -- [T cell anergy](http://purl.obolibrary.org/obo/GO_0002870) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [T cell anergy](http://purl.obolibrary.org/obo/GO_0002870) EquivalentTo [lymphocyte anergy](http://purl.obolibrary.org/obo/GO_0002249) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) +- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [T cell anergy](http://purl.obolibrary.org/obo/GO_0002870) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" -### T cell costimulation `http://purl.obolibrary.org/obo/GO_0031295` +### dermatocranium `http://purl.obolibrary.org/obo/UBERON_0003113` #### Removed -- [T cell costimulation](http://purl.obolibrary.org/obo/GO_0031295) EquivalentTo [lymphocyte costimulation](http://purl.obolibrary.org/obo/GO_0031294) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) - -- [T cell costimulation](http://purl.obolibrary.org/obo/GO_0031295) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [dermatocranium](http://purl.obolibrary.org/obo/UBERON_0003113) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Gnathostomata ](http://purl.obolibrary.org/obo/NCBITaxon_7776) #### Added -- [T cell costimulation](http://purl.obolibrary.org/obo/GO_0031295) EquivalentTo [lymphocyte costimulation](http://purl.obolibrary.org/obo/GO_0031294) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084)) - -- [T cell costimulation](http://purl.obolibrary.org/obo/GO_0031295) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell](http://purl.obolibrary.org/obo/CL_0000084) +- [dermatocranium](http://purl.obolibrary.org/obo/UBERON_0003113) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Vertebrata ](http://purl.obolibrary.org/obo/NCBITaxon_7742) -### T cell receptor binding `http://purl.obolibrary.org/obo/GO_0042608` +### digestive tract epithelium `http://purl.obolibrary.org/obo/UBERON_0003929` #### Removed -- [T cell receptor binding](http://purl.obolibrary.org/obo/GO_0042608) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell receptor complex](http://purl.obolibrary.org/obo/GO_0042101)) +- [digestive tract epithelium](http://purl.obolibrary.org/obo/UBERON_0003929) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00047143" + -- [T cell receptor binding](http://purl.obolibrary.org/obo/GO_0042608) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T cell receptor complex](http://purl.obolibrary.org/obo/GO_0042101) + +### endothelial cell of central vein of liver `http://purl.obolibrary.org/obo/CL_4033061` #### Added -- [T cell receptor binding](http://purl.obolibrary.org/obo/GO_0042608) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell receptor complex](http://purl.obolibrary.org/obo/GO_0042101)) +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "endothelial cell of central vein" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:28287163" -- [T cell receptor binding](http://purl.obolibrary.org/obo/GO_0042608) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T cell receptor complex](http://purl.obolibrary.org/obo/GO_0042101) +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) [label](http://www.w3.org/2000/01/rdf-schema#label) "endothelial cell of central vein of liver" -### T-helper 1 cell activation `http://purl.obolibrary.org/obo/GO_0035711` -#### Removed -- [T-helper 1 cell activation](http://purl.obolibrary.org/obo/GO_0035711) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T-helper 1 cell](http://purl.obolibrary.org/obo/CL_0000545)) +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An endothelial cell that is part of a central vein of liver." + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:28287163" -- [T-helper 1 cell activation](http://purl.obolibrary.org/obo/GO_0035711) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T-helper 1 cell](http://purl.obolibrary.org/obo/CL_0000545) +- Class: [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) + +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) EquivalentTo [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [central vein of liver](http://purl.obolibrary.org/obo/UBERON_0006841)) + +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [central vein of liver](http://purl.obolibrary.org/obo/UBERON_0006841) + +- [endothelial cell of central vein of liver](http://purl.obolibrary.org/obo/CL_4033061) SubClassOf [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115) -#### Added -- [T-helper 1 cell activation](http://purl.obolibrary.org/obo/GO_0035711) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T-helper 1 cell](http://purl.obolibrary.org/obo/CL_0000545)) -- [T-helper 1 cell activation](http://purl.obolibrary.org/obo/GO_0035711) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T-helper 1 cell](http://purl.obolibrary.org/obo/CL_0000545) +### epithelium `http://purl.obolibrary.org/obo/UBERON_0000483` +#### Removed +- [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Eumetazoa](http://purl.obolibrary.org/obo/NCBITaxon_6072) + +#### Added +- [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Metazoa](http://purl.obolibrary.org/obo/NCBITaxon_33208) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" -### T-helper 2 cell activation `http://purl.obolibrary.org/obo/GO_0035712` +### extraembryonic portion of umbilical artery `http://purl.obolibrary.org/obo/UBERON_0011693` #### Removed -- [T-helper 2 cell activation](http://purl.obolibrary.org/obo/GO_0035712) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [T-helper 2 cell](http://purl.obolibrary.org/obo/CL_0000546)) +- [extraembryonic portion of umbilical artery](http://purl.obolibrary.org/obo/UBERON_0011693) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -- [T-helper 2 cell activation](http://purl.obolibrary.org/obo/GO_0035712) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [T-helper 2 cell](http://purl.obolibrary.org/obo/CL_0000546) +- [extraembryonic portion of umbilical artery](http://purl.obolibrary.org/obo/UBERON_0011693) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [T-helper 2 cell activation](http://purl.obolibrary.org/obo/GO_0035712) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T-helper 2 cell](http://purl.obolibrary.org/obo/CL_0000546)) +- [extraembryonic portion of umbilical artery](http://purl.obolibrary.org/obo/UBERON_0011693) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [T-helper 2 cell activation](http://purl.obolibrary.org/obo/GO_0035712) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [T-helper 2 cell](http://purl.obolibrary.org/obo/CL_0000546) +- [extraembryonic portion of umbilical artery](http://purl.obolibrary.org/obo/UBERON_0011693) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### [tyrosine 3-monooxygenase] kinase activity `http://purl.obolibrary.org/obo/GO_0050369` +### eye trabecular meshwork `http://purl.obolibrary.org/obo/UBERON_0005969` #### Removed -- [[tyrosine 3-monooxygenase] kinase activity](http://purl.obolibrary.org/obo/GO_0050369) EquivalentTo [kinase activity](http://purl.obolibrary.org/obo/GO_0016301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [tyrosine 3-monooxygenase](http://purl.obolibrary.org/obo/PR_000016301)) +- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [[tyrosine 3-monooxygenase] kinase activity](http://purl.obolibrary.org/obo/GO_0050369) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [tyrosine 3-monooxygenase](http://purl.obolibrary.org/obo/PR_000016301) +- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [[tyrosine 3-monooxygenase] kinase activity](http://purl.obolibrary.org/obo/GO_0050369) EquivalentTo [kinase activity](http://purl.obolibrary.org/obo/GO_0016301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [tyrosine 3-monooxygenase](http://purl.obolibrary.org/obo/PR_000016301)) +- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [[tyrosine 3-monooxygenase] kinase activity](http://purl.obolibrary.org/obo/GO_0050369) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [tyrosine 3-monooxygenase](http://purl.obolibrary.org/obo/PR_000016301) -### abbreviation `http://purl.obolibrary.org/obo/OMO_0003000` +### facial artery `http://purl.obolibrary.org/obo/UBERON_0001612` +#### Removed +- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) #### Added -- [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) +- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) -### abdominal aorta `http://purl.obolibrary.org/obo/UBERON_0001516` +### femoral artery `http://purl.obolibrary.org/obo/UBERON_0002060` #### Removed -- [abdominal aorta](http://purl.obolibrary.org/obo/UBERON_0001516) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [external iliac artery](http://purl.obolibrary.org/obo/UBERON_0001308) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "WP" + +- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [abdominal aorta](http://purl.obolibrary.org/obo/UBERON_0001516) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [external iliac artery](http://purl.obolibrary.org/obo/UBERON_0001308) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "WP" + +- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### abdominal cavity `http://purl.obolibrary.org/obo/UBERON_0003684` +### foramen for glossopharyngeal nerve `http://purl.obolibrary.org/obo/UBERON_0018321` #### Removed -- [abdominal cavity](http://purl.obolibrary.org/obo/UBERON_0003684) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [foramen for glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0018321) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:9ca0bda7-9111-4f59-bc72-5d47bc3d7d61" -#### Added -- [abdominal cavity](http://purl.obolibrary.org/obo/UBERON_0003684) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### abdominal wall `http://purl.obolibrary.org/obo/UBERON_0003697` +### glial cell `http://purl.obolibrary.org/obo/CL_0000125` #### Removed -- [abdominal wall](http://purl.obolibrary.org/obo/UBERON_0003697) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [glial cell](http://purl.obolibrary.org/obo/CL_0000125) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -#### Added -- [abdominal wall](http://purl.obolibrary.org/obo/UBERON_0003697) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [glial cell](http://purl.obolibrary.org/obo/CL_0000125) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### accessory XI nerve `http://purl.obolibrary.org/obo/UBERON_0002019` + +### haploid cell `http://purl.obolibrary.org/obo/CL_0000413` #### Removed -- [accessory XI nerve](http://purl.obolibrary.org/obo/UBERON_0002019) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [haploid cell](http://purl.obolibrary.org/obo/CL_0000413) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [accessory XI nerve](http://purl.obolibrary.org/obo/UBERON_0002019) [RO_0002174](http://purl.obolibrary.org/obo/RO_0002174) [NCBITaxon_8292](http://purl.obolibrary.org/obo/NCBITaxon_8292) - - [source](http://www.geneontology.org/formats/oboInOwl#source) "VHOG" +- [haploid cell](http://purl.obolibrary.org/obo/CL_0000413) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "http://code.google.com/p/xenopus-anatomy-ontology/issues/detail?id=7" - - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" + +### has connecting branch `http://purl.obolibrary.org/obo/RO_0002253` #### Added -- [accessory XI nerve](http://purl.obolibrary.org/obo/UBERON_0002019) [RO_0002174](http://purl.obolibrary.org/obo/RO_0002174) [NCBITaxon_8292](http://purl.obolibrary.org/obo/NCBITaxon_8292) - - [source](http://www.geneontology.org/formats/oboInOwl#source) "VHOG" +- [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) [label](http://www.w3.org/2000/01/rdf-schema#label) "has connecting branch" - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "http://code.google.com/p/xenopus-anatomy-ontology/issues/detail?id=7" +- [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [RO_0002259](http://purl.obolibrary.org/obo/RO_0002259) - - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" +- [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "inverse of connecting branch of" + +- [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) [RO_0004036](http://purl.obolibrary.org/obo/RO_0004036) [has part](http://purl.obolibrary.org/obo/BFO_0000051) + +- ObjectProperty: [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) -- [accessory XI nerve](http://purl.obolibrary.org/obo/UBERON_0002019) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [has connecting branch](http://purl.obolibrary.org/obo/RO_0002253) SubPropertyOf: [in branching relationship with](http://purl.obolibrary.org/obo/RO_0002375) -### accessory nerve root `http://purl.obolibrary.org/obo/UBERON_0014615` +### ileocolic artery `http://purl.obolibrary.org/obo/UBERON_0001197` #### Removed -- [accessory nerve root](http://purl.obolibrary.org/obo/UBERON_0014615) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "c11n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1580" +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) #### Added -- [accessory nerve root](http://purl.obolibrary.org/obo/UBERON_0014615) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "c11n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1580" +- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) -### acellular anatomical structure `http://purl.obolibrary.org/obo/UBERON_0000476` +### ilioischiadic foramen `http://purl.obolibrary.org/obo/UBERON_0018326` #### Removed -- [acellular anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000476) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acellular anatomical structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000382" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [acellular anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000476) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acellular anatomical structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000382" +- [ilioischiadic foramen](http://purl.obolibrary.org/obo/UBERON_0018326) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:63e09c69-ac98-49ba-b232-2da5c7b19019" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -### acetylcholine binding `http://purl.obolibrary.org/obo/GO_0042166` +### inferior suprarenal artery `http://purl.obolibrary.org/obo/UBERON_0002056` #### Removed -- [acetylcholine binding](http://purl.obolibrary.org/obo/GO_0042166) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) EquivalentTo [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184)) -- [acetylcholine binding](http://purl.obolibrary.org/obo/GO_0042166) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) +- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) #### Added -- [acetylcholine binding](http://purl.obolibrary.org/obo/GO_0042166) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) EquivalentTo [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184)) -- [acetylcholine binding](http://purl.obolibrary.org/obo/GO_0042166) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) +- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) -### acetylcholine receptor activity `http://purl.obolibrary.org/obo/GO_0015464` +### inferior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001311` #### Removed -- [acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0015464) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) -- [acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0015464) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) +- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) #### Added -- [acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0015464) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) +- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) + + +### intermediate cell of urothelium `http://purl.obolibrary.org/obo/CL_4030055` +#### Removed +- [intermediate cell of urothelium](http://purl.obolibrary.org/obo/CL_4030055) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [intermediate cell of urothelium](http://purl.obolibrary.org/obo/CL_4030055) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -- [acetylcholine receptor activity](http://purl.obolibrary.org/obo/GO_0015464) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) -### acromioclavicular joint `http://purl.obolibrary.org/obo/UBERON_0003692` +### internal thoracic artery `http://purl.obolibrary.org/obo/UBERON_0002456` #### Removed -- [acromioclavicular joint](http://purl.obolibrary.org/obo/UBERON_0003692) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) #### Added -- [acromioclavicular joint](http://purl.obolibrary.org/obo/UBERON_0003692) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) -### acromion `http://purl.obolibrary.org/obo/UBERON_0002497` +### jaw mesenchyme `http://purl.obolibrary.org/obo/UBERON_0034995` #### Removed -- [acromion](http://purl.obolibrary.org/obo/UBERON_0002497) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/79/Gray206.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [jaw mesenchyme](http://purl.obolibrary.org/obo/UBERON_0034995) SubClassOf [head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005253) #### Added -- [acromion](http://purl.obolibrary.org/obo/UBERON_0002497) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/79/Gray206.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [jaw mesenchyme](http://purl.obolibrary.org/obo/UBERON_0034995) SubClassOf [mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003104) -### adenohypophysis `http://purl.obolibrary.org/obo/UBERON_0002196` +### jejunal artery `http://purl.obolibrary.org/obo/UBERON_0018255` #### Removed -- [adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0002196) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AHP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1581" +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) -- [adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0002196) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0002196) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) -- [adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0002196) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AHP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1581" - -### adipocyte of breast `http://purl.obolibrary.org/obo/CL_0002617` +### keratocyte `http://purl.obolibrary.org/obo/CL_0002363` #### Removed -- [adipocyte of breast](http://purl.obolibrary.org/obo/CL_0002617) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of the breast." +- [keratocyte](http://purl.obolibrary.org/obo/CL_0002363) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate." - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:978-0-7020-2958-5" + #### Added -- [adipocyte of breast](http://purl.obolibrary.org/obo/CL_0002617) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of the breast." +- [keratocyte](http://purl.obolibrary.org/obo/CL_0002363) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate." - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780702029585" -### adipocyte of epicardial fat of left ventricle `http://purl.obolibrary.org/obo/CL_1000311` + +### kidney afferent arteriole endothelial cell `http://purl.obolibrary.org/obo/CL_1001096` #### Removed -- [adipocyte of epicardial fat of left ventricle](http://purl.obolibrary.org/obo/CL_1000311) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of the epicardial fat of left ventricle." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" +- [kidney afferent arteriole endothelial cell](http://purl.obolibrary.org/obo/CL_1001096) SubClassOf [interlobulary artery endothelial cell](http://purl.obolibrary.org/obo/CL_1001216) #### Added -- [adipocyte of epicardial fat of left ventricle](http://purl.obolibrary.org/obo/CL_1000311) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of the epicardial fat of left ventricle." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" +- [kidney afferent arteriole endothelial cell](http://purl.obolibrary.org/obo/CL_1001096) SubClassOf [endothelial cell of artery](http://purl.obolibrary.org/obo/CL_1000413) -### adipocyte of epicardial fat of right ventricle `http://purl.obolibrary.org/obo/CL_1000310` +### kidney afferent arteriole smooth muscle cell `http://purl.obolibrary.org/obo/CL_1001097` #### Removed -- [adipocyte of epicardial fat of right ventricle](http://purl.obolibrary.org/obo/CL_1000310) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of the epicardial fat of right ventricle." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" +- [kidney afferent arteriole smooth muscle cell](http://purl.obolibrary.org/obo/CL_1001097) SubClassOf [interlobulary artery smooth muscle cell](http://purl.obolibrary.org/obo/CL_1001217) -#### Added -- [adipocyte of epicardial fat of right ventricle](http://purl.obolibrary.org/obo/CL_1000310) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of the epicardial fat of right ventricle." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" -### adipocyte of omentum tissue `http://purl.obolibrary.org/obo/CL_0002615` +### kidney arcuate artery `http://purl.obolibrary.org/obo/UBERON_0001552` #### Removed -- [adipocyte of omentum tissue](http://purl.obolibrary.org/obo/CL_0002615) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of omentum tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" +- [kidney arcuate artery](http://purl.obolibrary.org/obo/UBERON_0001552) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) #### Added -- [adipocyte of omentum tissue](http://purl.obolibrary.org/obo/CL_0002615) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of omentum tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" +- [kidney arcuate artery](http://purl.obolibrary.org/obo/UBERON_0001552) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) -### adrenal cortex `http://purl.obolibrary.org/obo/UBERON_0001235` +### lacrimal artery `http://purl.obolibrary.org/obo/UBERON_0001622` #### Removed -- [adrenal cortex](http://purl.obolibrary.org/obo/UBERON_0001235) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496) #### Added -- [adrenal cortex](http://purl.obolibrary.org/obo/UBERON_0001235) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" +- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### adrenal gland `http://purl.obolibrary.org/obo/UBERON_0002369` -#### Removed -- [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9d/Illu_endocrine_system_New.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### lacrimal canaliculus `http://purl.obolibrary.org/obo/UBERON_0001770` +#### Removed +- [lacrimal canaliculus](http://purl.obolibrary.org/obo/UBERON_0001770) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - resolve lacrimal canaliculus vs lacrimal duct" #### Added -- [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9d/Illu_endocrine_system_New.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lacrimal canaliculus](http://purl.obolibrary.org/obo/UBERON_0001770) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lacrimal duct" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:1587341026" -- [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://www.bartleby.com/lit-hub/anatomy-of-the-human-body/fig-896/" -### adrenal medulla `http://purl.obolibrary.org/obo/UBERON_0001236` +### lacrimal drainage system `http://purl.obolibrary.org/obo/UBERON_0001850` #### Removed -- [adrenal medulla](http://purl.obolibrary.org/obo/UBERON_0001236) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lacrimal drainage system](http://purl.obolibrary.org/obo/UBERON_0001850) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - resolve lacrimal canaliculus vs larcimal duct" -#### Added -- [adrenal medulla](http://purl.obolibrary.org/obo/UBERON_0001236) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### adult organism `http://purl.obolibrary.org/obo/UBERON_0007023` +### left eye `http://purl.obolibrary.org/obo/UBERON_0004548` #### Removed -- [adult organism](http://purl.obolibrary.org/obo/UBERON_0007023) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "adults" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002046" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [adult organism](http://purl.obolibrary.org/obo/UBERON_0007023) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "adults" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002046" +- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -### adventitia `http://purl.obolibrary.org/obo/UBERON_0005742` +### left lung `http://purl.obolibrary.org/obo/UBERON_0002168` #### Removed -- [adventitia](http://purl.obolibrary.org/obo/UBERON_0005742) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [adventitia](http://purl.obolibrary.org/obo/UBERON_0005742) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### allantois `http://purl.obolibrary.org/obo/UBERON_0004340` +### lobar bronchus of left lung `http://purl.obolibrary.org/obo/UBERON_0003405` #### Removed -- [allantois](http://purl.obolibrary.org/obo/UBERON_0004340) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray25.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [allantois](http://purl.obolibrary.org/obo/UBERON_0004340) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray25.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### alpha-beta T cell activation `http://purl.obolibrary.org/obo/GO_0046631` -#### Removed -- [alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0046631) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000789)) -- [alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0046631) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000789) +### lobar bronchus of right lung `http://purl.obolibrary.org/obo/UBERON_0003404` +#### Removed +- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0046631) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000789)) +- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [alpha-beta T cell activation](http://purl.obolibrary.org/obo/GO_0046631) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [alpha-beta T cell](http://purl.obolibrary.org/obo/CL_0000789) -### alveolus of lung `http://purl.obolibrary.org/obo/UBERON_0002299` +### lung `http://purl.obolibrary.org/obo/UBERON_0002048` #### Removed -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "respiratory alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000060" -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/46/Alveolus_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/46/Alveolus_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### medial circumflex femoral artery `http://purl.obolibrary.org/obo/UBERON_0001356` +#### Removed +- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000060" +#### Added +- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [alveolus of lung](http://purl.obolibrary.org/obo/UBERON_0002299) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "respiratory alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### amide binding `http://purl.obolibrary.org/obo/GO_0033218` +### medullary arteriole of lymph node `http://purl.obolibrary.org/obo/UBERON_8410035` #### Removed -- [amide binding](http://purl.obolibrary.org/obo/GO_0033218) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32988](http://purl.obolibrary.org/obo/CHEBI_32988)) - -- [amide binding](http://purl.obolibrary.org/obo/GO_0033218) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32988](http://purl.obolibrary.org/obo/CHEBI_32988) +- [medullary arteriole of lymph node](http://purl.obolibrary.org/obo/UBERON_8410035) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) #### Added -- [amide binding](http://purl.obolibrary.org/obo/GO_0033218) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32988](http://purl.obolibrary.org/obo/CHEBI_32988)) +- [medullary arteriole of lymph node](http://purl.obolibrary.org/obo/UBERON_8410035) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) -- [amide binding](http://purl.obolibrary.org/obo/GO_0033218) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32988](http://purl.obolibrary.org/obo/CHEBI_32988) - -### amine binding `http://purl.obolibrary.org/obo/GO_0043176` +### mesenchyme of tongue `http://purl.obolibrary.org/obo/UBERON_0003416` #### Removed -- [amine binding](http://purl.obolibrary.org/obo/GO_0043176) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) - -- [amine binding](http://purl.obolibrary.org/obo/GO_0043176) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) +- [mesenchyme of tongue](http://purl.obolibrary.org/obo/UBERON_0003416) SubClassOf [head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005253) #### Added -- [amine binding](http://purl.obolibrary.org/obo/GO_0043176) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) +- [mesenchyme of tongue](http://purl.obolibrary.org/obo/UBERON_0003416) SubClassOf [mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003104) -- [amine binding](http://purl.obolibrary.org/obo/GO_0043176) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) - -### amino acid binding `http://purl.obolibrary.org/obo/GO_0016597` +### middle colic artery `http://purl.obolibrary.org/obo/UBERON_0001196` #### Removed -- [amino acid binding](http://purl.obolibrary.org/obo/GO_0016597) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) -- [amino acid binding](http://purl.obolibrary.org/obo/GO_0016597) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709) +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) + +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [amino acid binding](http://purl.obolibrary.org/obo/GO_0016597) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) -- [amino acid binding](http://purl.obolibrary.org/obo/GO_0016597) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709) +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) +- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### ammonium ion binding `http://purl.obolibrary.org/obo/GO_0070405` -#### Removed -- [ammonium ion binding](http://purl.obolibrary.org/obo/GO_0070405) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) -- [ammonium ion binding](http://purl.obolibrary.org/obo/GO_0070405) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938) +### mouth `http://purl.obolibrary.org/obo/UBERON_0000165` +#### Removed +- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) SubClassOf [overlaps](http://purl.obolibrary.org/obo/RO_0002131) some [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "exceptions in some taxa" -#### Added -- [ammonium ion binding](http://purl.obolibrary.org/obo/GO_0070405) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) +- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [head](http://purl.obolibrary.org/obo/UBERON_0000033) -- [ammonium ion binding](http://purl.obolibrary.org/obo/GO_0070405) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938) -### amnion `http://purl.obolibrary.org/obo/UBERON_0000305` +### musculo-phrenic artery `http://purl.obolibrary.org/obo/UBERON_0006632` #### Removed -- [amnion](http://purl.obolibrary.org/obo/UBERON_0000305) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" +- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456)) -- [amnion](http://purl.obolibrary.org/obo/UBERON_0000305) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray14.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) #### Added -- [amnion](http://purl.obolibrary.org/obo/UBERON_0000305) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray14.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456)) -- [amnion](http://purl.obolibrary.org/obo/UBERON_0000305) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) -### amygdala `http://purl.obolibrary.org/obo/UBERON_0001876` -#### Removed -- [amygdala](http://purl.obolibrary.org/obo/UBERON_0001876) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Amyg.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### myeloid lineage restricted progenitor cell `http://purl.obolibrary.org/obo/CL_0000839` #### Added -- [amygdala](http://purl.obolibrary.org/obo/UBERON_0001876) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [myeloid lineage restricted progenitor cell](http://purl.obolibrary.org/obo/CL_0000839) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [amygdala](http://purl.obolibrary.org/obo/UBERON_0001876) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [myeloid lineage restricted progenitor cell](http://purl.obolibrary.org/obo/CL_0000839) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -- [amygdala](http://purl.obolibrary.org/obo/UBERON_0001876) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Amyg.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -### anal canal `http://purl.obolibrary.org/obo/UBERON_0000159` +### nasal skeleton `http://purl.obolibrary.org/obo/UBERON_0006813` #### Removed -- [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [nasal skeleton](http://purl.obolibrary.org/obo/UBERON_0006813) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [facial skeleton](http://purl.obolibrary.org/obo/UBERON_0011156) -#### Added -- [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### anal column `http://purl.obolibrary.org/obo/UBERON_0009882` -#### Removed -- [anal column](http://purl.obolibrary.org/obo/UBERON_0009882) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### nasolacrimal duct `http://purl.obolibrary.org/obo/UBERON_0002392` #### Added -- [anal column](http://purl.obolibrary.org/obo/UBERON_0009882) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [nasolacrimal duct](http://purl.obolibrary.org/obo/UBERON_0002392) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lacrimal duct" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30285382" -### anal region `http://purl.obolibrary.org/obo/UBERON_0001353` +### neocortex `http://purl.obolibrary.org/obo/UBERON_0001950` #### Removed -- [anal region](http://purl.obolibrary.org/obo/UBERON_0001353) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [neocortex](http://purl.obolibrary.org/obo/UBERON_0001950) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Mammalia](http://purl.obolibrary.org/obo/NCBITaxon_40674) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" #### Added -- [anal region](http://purl.obolibrary.org/obo/UBERON_0001353) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [neocortex](http://purl.obolibrary.org/obo/UBERON_0001950) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Vertebrata ](http://purl.obolibrary.org/obo/NCBITaxon_7742) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" -### anal tooth `http://purl.obolibrary.org/obo/UBERON_0012468` -#### Removed -- [anal tooth](http://purl.obolibrary.org/obo/UBERON_0012468) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anal teeth" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +### neurocranium bone `http://purl.obolibrary.org/obo/UBERON_0011164` #### Added -- [anal tooth](http://purl.obolibrary.org/obo/UBERON_0012468) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anal teeth" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [neurocranium bone](http://purl.obolibrary.org/obo/UBERON_0011164) SubClassOf [head bone](http://purl.obolibrary.org/obo/UBERON_0003457) -### anatomical cluster `http://purl.obolibrary.org/obo/UBERON_0000477` +### occipital artery `http://purl.obolibrary.org/obo/UBERON_0001613` +#### Removed +- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) #### Added -- [anatomical cluster](http://purl.obolibrary.org/obo/UBERON_0000477) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002461" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" +- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)) and ([supplies](http://purl.obolibrary.org/obo/RO_0002178) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) -### anatomical conduit `http://purl.obolibrary.org/obo/UBERON_0004111` +### ophthalmic artery `http://purl.obolibrary.org/obo/UBERON_0001619` #### Removed -- [anatomical conduit](http://purl.obolibrary.org/obo/UBERON_0004111) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ostia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) -- [anatomical conduit](http://purl.obolibrary.org/obo/UBERON_0004111) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "foramina" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-6601-2165" +- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496) #### Added -- [anatomical conduit](http://purl.obolibrary.org/obo/UBERON_0004111) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "foramina" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-6601-2165" +- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) -- [anatomical conduit](http://purl.obolibrary.org/obo/UBERON_0004111) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ostia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) + +### outer epithelium `http://purl.obolibrary.org/obo/UBERON_0007376` + +#### Added +- [outer epithelium](http://purl.obolibrary.org/obo/UBERON_0007376) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Eumetazoa](http://purl.obolibrary.org/obo/NCBITaxon_6072) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia:Epidermis_(zoology)" -### anatomical projection `http://purl.obolibrary.org/obo/UBERON_0004529` +### pancreatic artery `http://purl.obolibrary.org/obo/UBERON_0039261` #### Removed -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "processes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" +- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) + +- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) + +#### Added +- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "projections" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +### pericardial cavity `http://purl.obolibrary.org/obo/UBERON_0001074` +#### Removed +- [pericardial cavity](http://purl.obolibrary.org/obo/UBERON_0001074) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_7718](http://purl.obolibrary.org/obo/NCBITaxon_7718) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:20959416" + -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "shelves" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +### placental blood `http://purl.obolibrary.org/obo/UBERON_8470000` +#### Removed +- [placental blood](http://purl.obolibrary.org/obo/UBERON_8470000) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "lamellae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "ridges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" +### posterior communicating artery `http://purl.obolibrary.org/obo/UBERON_0001628` +#### Removed +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) EquivalentTo [communicating artery](http://purl.obolibrary.org/obo/UBERON_0006347) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [circle of Willis](http://purl.obolibrary.org/obo/UBERON_0003709)) and ([branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "flanges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496) #### Added -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "ridges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) EquivalentTo [communicating artery](http://purl.obolibrary.org/obo/UBERON_0006347) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [circle of Willis](http://purl.obolibrary.org/obo/UBERON_0003709)) and ([connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "shelves" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "projections" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" +### posterior lateral line `http://purl.obolibrary.org/obo/UBERON_0006334` +#### Removed +- [posterior lateral line](http://purl.obolibrary.org/obo/UBERON_0006334) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:4413" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "processes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +### posterior nasal aperture `http://purl.obolibrary.org/obo/UBERON_0004771` +#### Removed +- [posterior nasal aperture](http://purl.obolibrary.org/obo/UBERON_0004771) SubClassOf [orifice of skull](http://purl.obolibrary.org/obo/UBERON_0036253) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "lamellae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -- [anatomical projection](http://purl.obolibrary.org/obo/UBERON_0004529) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "flanges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0000180" +### processual entity `http://purl.obolibrary.org/obo/UBERON_0000000` - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +#### Added +- [processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BFO:0000003" -### anatomical space `http://purl.obolibrary.org/obo/UBERON_0000464` +### proper hepatic artery `http://purl.obolibrary.org/obo/UBERON_0015480` #### Removed -- [anatomical space](http://purl.obolibrary.org/obo/UBERON_0000464) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anatomical spaces" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [proper hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015480) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001643" +- [proper hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015480) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [anatomical space](http://purl.obolibrary.org/obo/UBERON_0000464) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anatomical spaces" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001643" +- [proper hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015480) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +### pulmonary venous system `http://purl.obolibrary.org/obo/UBERON_0013127` -### anatomical system `http://purl.obolibrary.org/obo/UBERON_0000467` -#### Removed -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anatomical systems" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +#### Added +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [label](http://www.w3.org/2000/01/rdf-schema#label) "pulmonary venous system" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001439" +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [UBPROP_0000001](http://purl.obolibrary.org/obo/UBPROP_0000001) "Pulmonary circulation is the half portion of the cardiovascular system which carries oxygen-depleted blood away from the heart, to the lungs, and returns oxygenated (oxygen-rich) blood back to the heart. The term pulmonary circulation is readily paired and contrasted with the systemic circulation. A separate system known as the bronchial circulation supplies blood to the tissue of the larger airways of the lung." + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia:Pulmonary_circulation" -#### Added -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pulmonary venous circulatory system" -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anatomical systems" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001439" +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The part of the venous system that drains the lungs[Kardong]." + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:0073040584" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Pulmonary_venous_system" -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002460" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Pulmonary_venous_system" +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:0013127" -### ankle joint `http://purl.obolibrary.org/obo/UBERON_0001488` -#### Removed -- [ankle joint](http://purl.obolibrary.org/obo/UBERON_0001488) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- Class: [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) -#### Added -- [ankle joint](http://purl.obolibrary.org/obo/UBERON_0001488) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [venous system](http://purl.obolibrary.org/obo/UBERON_0004582) +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) SubClassOf [channels_from](http://purl.obolibrary.org/obo/uberon/core#channels_from) some [lung vasculature](http://purl.obolibrary.org/obo/UBERON_0000102) -### annulus fibrosus disci intervertebralis `http://purl.obolibrary.org/obo/UBERON_0004715` -#### Removed -- [annulus fibrosus disci intervertebralis](http://purl.obolibrary.org/obo/UBERON_0004715) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) SubClassOf [vasculature](http://purl.obolibrary.org/obo/UBERON_0002049) -#### Added -- [annulus fibrosus disci intervertebralis](http://purl.obolibrary.org/obo/UBERON_0004715) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -### anterior chamber of eyeball `http://purl.obolibrary.org/obo/UBERON_0001766` -#### Removed -- [anterior chamber of eyeball](http://purl.obolibrary.org/obo/UBERON_0001766) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anterior chamber of eyeball](http://purl.obolibrary.org/obo/UBERON_0001766) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### anterior hypothalamic region `http://purl.obolibrary.org/obo/UBERON_0002550` -#### Removed -- [anterior hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002550) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1005" - -#### Added -- [anterior hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002550) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1005" - - -### anterior lateral line ganglion `http://purl.obolibrary.org/obo/UBERON_2001391` -#### Removed -- [anterior lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2001391) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior lateral line ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001391" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [anterior lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2001391) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior lateral line ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001391" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### anterior lateral line placode `http://purl.obolibrary.org/obo/UBERON_2001316` -#### Removed -- [anterior lateral line placode](http://purl.obolibrary.org/obo/UBERON_2001316) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior lateral line placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001316" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [anterior lateral line placode](http://purl.obolibrary.org/obo/UBERON_2001316) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior lateral line placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001316" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### anterior lateral line primordium `http://purl.obolibrary.org/obo/UBERON_2005117` -#### Removed -- [anterior lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2005117) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anterior lateral line primordia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005117" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [anterior lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2005117) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anterior lateral line primordia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005117" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### anterior part of tongue `http://purl.obolibrary.org/obo/UBERON_0010032` -#### Removed -- [anterior part of tongue](http://purl.obolibrary.org/obo/UBERON_0010032) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4c/Illu04_tongue.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anterior part of tongue](http://purl.obolibrary.org/obo/UBERON_0010032) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4c/Illu04_tongue.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### anterior segment of eyeball `http://purl.obolibrary.org/obo/UBERON_0001801` -#### Removed -- [anterior segment of eyeball](http://purl.obolibrary.org/obo/UBERON_0001801) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anterior segment of eyeball](http://purl.obolibrary.org/obo/UBERON_0001801) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### anterior tibial vein `http://purl.obolibrary.org/obo/UBERON_0001545` -#### Removed -- [anterior tibial vein](http://purl.obolibrary.org/obo/UBERON_0001545) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4e/Gray440_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anterior tibial vein](http://purl.obolibrary.org/obo/UBERON_0001545) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4e/Gray440_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### anterior vena cava `http://purl.obolibrary.org/obo/UBERON_0001585` -#### Removed -- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Venenwinkel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Venenwinkel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### anteroventral cochlear nucleus `http://purl.obolibrary.org/obo/UBERON_0002830` -#### Removed -- [anteroventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002830) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AVCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2572" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -#### Added -- [anteroventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002830) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AVCo" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2572" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### anteroventral periventricular nucleus `http://purl.obolibrary.org/obo/UBERON_0002690` -#### Removed -- [anteroventral periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002690) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AVPe" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1401" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -#### Added -- [anteroventral periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002690) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "AVPe" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1401" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### anus `http://purl.obolibrary.org/obo/UBERON_0001245` -#### Removed -- [anus](http://purl.obolibrary.org/obo/UBERON_0001245) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/65/Protovsdeuterostomes.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [anus](http://purl.obolibrary.org/obo/UBERON_0001245) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [anus](http://purl.obolibrary.org/obo/UBERON_0001245) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [anus](http://purl.obolibrary.org/obo/UBERON_0001245) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/65/Protovsdeuterostomes.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### aorta `http://purl.obolibrary.org/obo/UBERON_0000947` -#### Removed -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [aorta](http://purl.obolibrary.org/obo/UBERON_0000947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### aorta elastic tissue `http://purl.obolibrary.org/obo/UBERON_0003609` -#### Removed -- [aorta elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003609) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "aorta elastic laminae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0009862" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [aorta elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003609) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "aorta elastic laminae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0009862" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### aortico-pulmonary spiral septum `http://purl.obolibrary.org/obo/UBERON_0006207` -#### Removed -- [aortico-pulmonary spiral septum](http://purl.obolibrary.org/obo/UBERON_0006207) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [aortico-pulmonary spiral septum](http://purl.obolibrary.org/obo/UBERON_0006207) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### apical ectodermal ridge `http://purl.obolibrary.org/obo/UBERON_0004356` -#### Removed -- [apical ectodermal ridge](http://purl.obolibrary.org/obo/UBERON_0004356) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/56/Limbbuddiagram.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [apical ectodermal ridge](http://purl.obolibrary.org/obo/UBERON_0004356) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/56/Limbbuddiagram.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### aponeurosis `http://purl.obolibrary.org/obo/UBERON_0006614` -#### Removed -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "aponeuroses" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Aponeurosis" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Aponeurosis.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Aponeurosis.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "aponeuroses" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Aponeurosis" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### appendage `http://purl.obolibrary.org/obo/UBERON_0000026` -#### Removed -- [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "appendages" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000218" - -#### Added -- [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "appendages" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000218" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### appendicular skeleton `http://purl.obolibrary.org/obo/UBERON_0002091` -#### Removed -- [appendicular skeleton](http://purl.obolibrary.org/obo/UBERON_0002091) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Appendicular_skeleton_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [appendicular skeleton](http://purl.obolibrary.org/obo/UBERON_0002091) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Appendicular_skeleton_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### aqueous humor of eyeball `http://purl.obolibrary.org/obo/UBERON_0001796` -#### Removed -- [aqueous humor of eyeball](http://purl.obolibrary.org/obo/UBERON_0001796) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [aqueous humor of eyeball](http://purl.obolibrary.org/obo/UBERON_0001796) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### arachnoid mater `http://purl.obolibrary.org/obo/UBERON_0002362` -#### Removed -- [arachnoid mater](http://purl.obolibrary.org/obo/UBERON_0002362) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray767.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [arachnoid mater](http://purl.obolibrary.org/obo/UBERON_0002362) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray767.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### arachnoid trabecula `http://purl.obolibrary.org/obo/UBERON_0000439` -#### Removed -- [arachnoid trabecula](http://purl.obolibrary.org/obo/UBERON_0000439) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "arachnoid trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [arachnoid trabecula](http://purl.obolibrary.org/obo/UBERON_0000439) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "arachnoid trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### arch of aorta `http://purl.obolibrary.org/obo/UBERON_0001508` -#### Removed -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [arch of aorta](http://purl.obolibrary.org/obo/UBERON_0001508) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### arcuate nucleus of hypothalamus `http://purl.obolibrary.org/obo/UBERON_0001932` -#### Removed -- [arcuate nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001932) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ArcH" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1638" - -- [arcuate nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001932) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [arcuate nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001932) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [arcuate nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001932) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ArcH" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1638" - - -### arm `http://purl.obolibrary.org/obo/UBERON_0001460` -#### Removed -- [arm](http://purl.obolibrary.org/obo/UBERON_0001460) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Upperarm.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [arm](http://purl.obolibrary.org/obo/UBERON_0001460) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Upperarm.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### arrector muscle of hair `http://purl.obolibrary.org/obo/UBERON_0002033` -#### Removed -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili smooth muscle" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000778" - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pilli muscle" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:67821" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000778" - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili muscle" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:26779" - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pilli" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "erector pili" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005132" - -#### Added -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "erector pili" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005132" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili muscle" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:26779" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:67821" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000778" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pilli muscle" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pilli" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010679" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arrector pili smooth muscle" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000778" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### arterial blood `http://purl.obolibrary.org/obo/UBERON_0013755` - -#### Added -- [arterial blood](http://purl.obolibrary.org/obo/UBERON_0013755) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006188" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### arterial system `http://purl.obolibrary.org/obo/UBERON_0004572` - -#### Added -- [arterial system](http://purl.obolibrary.org/obo/UBERON_0004572) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [arterial system](http://purl.obolibrary.org/obo/UBERON_0004572) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### arteriole `http://purl.obolibrary.org/obo/UBERON_0001980` -#### Removed -- [arteriole](http://purl.obolibrary.org/obo/UBERON_0001980) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/da/Illu_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [arteriole](http://purl.obolibrary.org/obo/UBERON_0001980) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/da/Illu_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### artery `http://purl.obolibrary.org/obo/UBERON_0001637` -#### Removed -- [artery](http://purl.obolibrary.org/obo/UBERON_0001637) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arteries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000005" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [artery](http://purl.obolibrary.org/obo/UBERON_0001637) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arteries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000005" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### articular capsule `http://purl.obolibrary.org/obo/UBERON_0001484` -#### Removed -- [articular capsule](http://purl.obolibrary.org/obo/UBERON_0001484) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [articular capsule](http://purl.obolibrary.org/obo/UBERON_0001484) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray299.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [articular capsule](http://purl.obolibrary.org/obo/UBERON_0001484) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [articular capsule](http://purl.obolibrary.org/obo/UBERON_0001484) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray299.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ascending aorta `http://purl.obolibrary.org/obo/UBERON_0001496` -#### Removed -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ascending aorta](http://purl.obolibrary.org/obo/UBERON_0001496) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ascending colon `http://purl.obolibrary.org/obo/UBERON_0001156` -#### Removed -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -#### Added -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### astrocyte activation `http://purl.obolibrary.org/obo/GO_0048143` -#### Removed -- [astrocyte activation](http://purl.obolibrary.org/obo/GO_0048143) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127)) - -- [astrocyte activation](http://purl.obolibrary.org/obo/GO_0048143) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127) - -#### Added -- [astrocyte activation](http://purl.obolibrary.org/obo/GO_0048143) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127)) - -- [astrocyte activation](http://purl.obolibrary.org/obo/GO_0048143) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127) - - -### astrocyte-dopaminergic neuron signaling `http://purl.obolibrary.org/obo/GO_0036520` -#### Removed -- [astrocyte-dopaminergic neuron signaling](http://purl.obolibrary.org/obo/GO_0036520) EquivalentTo [glial cell-neuron signaling](http://purl.obolibrary.org/obo/GO_0150098) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [dopaminergic neuron](http://purl.obolibrary.org/obo/CL_0000700)) - -#### Added -- [astrocyte-dopaminergic neuron signaling](http://purl.obolibrary.org/obo/GO_0036520) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [astrocyte](http://purl.obolibrary.org/obo/CL_0000127)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [dopaminergic neuron](http://purl.obolibrary.org/obo/CL_0000700)) - - -### asymmetric neuroblast division `http://purl.obolibrary.org/obo/GO_0055059` -#### Removed -- [asymmetric neuroblast division](http://purl.obolibrary.org/obo/GO_0055059) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - -#### Added -- [asymmetric neuroblast division](http://purl.obolibrary.org/obo/GO_0055059) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - - -### asymmetric stem cell division `http://purl.obolibrary.org/obo/GO_0098722` -#### Removed -- [asymmetric stem cell division](http://purl.obolibrary.org/obo/GO_0098722) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034)) - -#### Added -- [asymmetric stem cell division](http://purl.obolibrary.org/obo/GO_0098722) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034)) - - -### atlanto-axial joint `http://purl.obolibrary.org/obo/UBERON_0003694` -#### Removed -- [atlanto-axial joint](http://purl.obolibrary.org/obo/UBERON_0003694) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [atlanto-axial joint](http://purl.obolibrary.org/obo/UBERON_0003694) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### atlanto-occipital joint `http://purl.obolibrary.org/obo/UBERON_0000220` -#### Removed -- [atlanto-occipital joint](http://purl.obolibrary.org/obo/UBERON_0000220) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [atlanto-occipital joint](http://purl.obolibrary.org/obo/UBERON_0000220) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### atrioventricular node `http://purl.obolibrary.org/obo/UBERON_0002352` -#### Removed -- [atrioventricular node](http://purl.obolibrary.org/obo/UBERON_0002352) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [atrioventricular node](http://purl.obolibrary.org/obo/UBERON_0002352) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray501.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [atrioventricular node](http://purl.obolibrary.org/obo/UBERON_0002352) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [atrioventricular node](http://purl.obolibrary.org/obo/UBERON_0002352) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray501.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### atrium myocardial trabecula `http://purl.obolibrary.org/obo/UBERON_0005988` -#### Removed -- [atrium myocardial trabecula](http://purl.obolibrary.org/obo/UBERON_0005988) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "atrium myocardial trabeculae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010581" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [atrium myocardial trabecula](http://purl.obolibrary.org/obo/UBERON_0005988) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "atrium myocardial trabeculae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010581" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### atypical epithelium `http://purl.obolibrary.org/obo/UBERON_0000488` -#### Removed -- [atypical epithelium](http://purl.obolibrary.org/obo/UBERON_0000488) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "atypical epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001493" - -#### Added -- [atypical epithelium](http://purl.obolibrary.org/obo/UBERON_0000488) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "atypical epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001493" - - -### auditory hair cell `http://purl.obolibrary.org/obo/CL_0000202` -#### Removed -- [auditory hair cell](http://purl.obolibrary.org/obo/CL_0000202) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:62364" - - - -### auditory ossicle bone `http://purl.obolibrary.org/obo/UBERON_0001686` -#### Removed -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ear ossicles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossicular chain" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b0/Illu_auditory_ossicles.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossicular chain" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ear ossicles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [auditory ossicle bone](http://purl.obolibrary.org/obo/UBERON_0001686) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b0/Illu_auditory_ossicles.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### auditory ossicle endochondral element `http://purl.obolibrary.org/obo/UBERON_0035130` -#### Removed -- [auditory ossicle endochondral element](http://purl.obolibrary.org/obo/UBERON_0035130) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossicular chain element" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [auditory ossicle endochondral element](http://purl.obolibrary.org/obo/UBERON_0035130) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ear ossicles element" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [auditory ossicle endochondral element](http://purl.obolibrary.org/obo/UBERON_0035130) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossicular chain element" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [auditory ossicle endochondral element](http://purl.obolibrary.org/obo/UBERON_0035130) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ear ossicles element" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### autonomic ganglion `http://purl.obolibrary.org/obo/UBERON_0001805` -#### Removed -- [autonomic ganglion](http://purl.obolibrary.org/obo/UBERON_0001805) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [autonomic ganglion](http://purl.obolibrary.org/obo/UBERON_0001805) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [autonomic ganglion](http://purl.obolibrary.org/obo/UBERON_0001805) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [autonomic ganglion](http://purl.obolibrary.org/obo/UBERON_0001805) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### autonomic nervous system `http://purl.obolibrary.org/obo/UBERON_0002410` -#### Removed -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ANS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ANS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axial mesoderm `http://purl.obolibrary.org/obo/UBERON_0003068` -#### Removed -- [axial mesoderm](http://purl.obolibrary.org/obo/UBERON_0003068) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axial mesoderm](http://purl.obolibrary.org/obo/UBERON_0003068) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axial skeleton plus cranial skeleton `http://purl.obolibrary.org/obo/UBERON_0005944` -#### Removed -- [axial skeleton plus cranial skeleton](http://purl.obolibrary.org/obo/UBERON_0005944) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axial skeleton plus cranial skeleton](http://purl.obolibrary.org/obo/UBERON_0005944) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axilla `http://purl.obolibrary.org/obo/UBERON_0009472` -#### Removed -- [axilla](http://purl.obolibrary.org/obo/UBERON_0009472) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axilla](http://purl.obolibrary.org/obo/UBERON_0009472) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axillary artery `http://purl.obolibrary.org/obo/UBERON_0001394` -#### Removed -- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/88/Axillary_limits.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/88/Axillary_limits.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axillary nerve `http://purl.obolibrary.org/obo/UBERON_0001493` -#### Removed -- [axillary nerve](http://purl.obolibrary.org/obo/UBERON_0001493) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ea/Brachial_plexus_2.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [axillary nerve](http://purl.obolibrary.org/obo/UBERON_0001493) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d4/Brachial_plexus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axillary nerve](http://purl.obolibrary.org/obo/UBERON_0001493) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ea/Brachial_plexus_2.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [axillary nerve](http://purl.obolibrary.org/obo/UBERON_0001493) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d4/Brachial_plexus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### axillary vein `http://purl.obolibrary.org/obo/UBERON_0000985` -#### Removed -- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### barrier epithelial cell `http://purl.obolibrary.org/obo/CL_0000073` -#### Removed -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) [label](http://www.w3.org/2000/01/rdf-schema#label) "barrier epithelial cell" - -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) SubClassOf [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) - -#### Added -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) [label](http://www.w3.org/2000/01/rdf-schema#label) "obsolete barrier epithelial cell" - -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "https://github.com/obophenotype/cell-ontology/issues/1149" - -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) [term replaced by](http://purl.obolibrary.org/obo/IAO_0100001) [barrier cell](http://purl.obolibrary.org/obo/CL_0000215) - -- [barrier epithelial cell](http://purl.obolibrary.org/obo/CL_0000073) [deprecated](http://www.w3.org/2002/07/owl#deprecated) true - - -### basal cell of epithelium of bronchus `http://purl.obolibrary.org/obo/CL_1000349` - -#### Added -- [basal cell of epithelium of bronchus](http://purl.obolibrary.org/obo/CL_1000349) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [basal cell of epithelium of bronchus](http://purl.obolibrary.org/obo/CL_1000349) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### basal forebrain `http://purl.obolibrary.org/obo/UBERON_0002743` -#### Removed -- [basal forebrain](http://purl.obolibrary.org/obo/UBERON_0002743) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a4/Basal_Forebrain_Monakhos_2007.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [basal forebrain](http://purl.obolibrary.org/obo/UBERON_0002743) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a4/Basal_Forebrain_Monakhos_2007.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### basal ganglion `http://purl.obolibrary.org/obo/UBERON_0002420` -#### Removed -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Basal_Ganglia_and_Related_Structures.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "basal ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "basal ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Basal_Ganglia_and_Related_Structures.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### basicranium `http://purl.obolibrary.org/obo/UBERON_0002517` -#### Removed -- [basicranium](http://purl.obolibrary.org/obo/UBERON_0002517) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [basicranium](http://purl.obolibrary.org/obo/UBERON_0002517) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### basophil activation `http://purl.obolibrary.org/obo/GO_0045575` -#### Removed -- [basophil activation](http://purl.obolibrary.org/obo/GO_0045575) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [basophil](http://purl.obolibrary.org/obo/CL_0000767)) - -- [basophil activation](http://purl.obolibrary.org/obo/GO_0045575) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [basophil](http://purl.obolibrary.org/obo/CL_0000767) - -#### Added -- [basophil activation](http://purl.obolibrary.org/obo/GO_0045575) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [basophil](http://purl.obolibrary.org/obo/CL_0000767)) - -- [basophil activation](http://purl.obolibrary.org/obo/GO_0045575) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [basophil](http://purl.obolibrary.org/obo/CL_0000767) - - -### beige adipocyte `http://purl.obolibrary.org/obo/CL_0001070` -#### Removed -- [beige adipocyte](http://purl.obolibrary.org/obo/CL_0001070) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is beige in color, thermogenic, and which differentiates in white fat tissue from a Myf5-negative progenitor." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:cvs" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:25851693" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:add" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:ymb" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:22796012" - -#### Added -- [beige adipocyte](http://purl.obolibrary.org/obo/CL_0001070) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is beige in color, thermogenic, and which differentiates in white fat tissue from a Myf5-negative progenitor." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:cvs" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:25851693" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:add" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:ymb" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:22796012" - - -### bicarbonate binding `http://purl.obolibrary.org/obo/GO_0071890` -#### Removed -- [bicarbonate binding](http://purl.obolibrary.org/obo/GO_0071890) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17544](http://purl.obolibrary.org/obo/CHEBI_17544)) - -- [bicarbonate binding](http://purl.obolibrary.org/obo/GO_0071890) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17544](http://purl.obolibrary.org/obo/CHEBI_17544) - -#### Added -- [bicarbonate binding](http://purl.obolibrary.org/obo/GO_0071890) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17544](http://purl.obolibrary.org/obo/CHEBI_17544)) - -- [bicarbonate binding](http://purl.obolibrary.org/obo/GO_0071890) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17544](http://purl.obolibrary.org/obo/CHEBI_17544) - - -### bilaminar disc `http://purl.obolibrary.org/obo/UBERON_0000091` -#### Removed -- [bilaminar disc](http://purl.obolibrary.org/obo/UBERON_0000091) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bilaminar disc](http://purl.obolibrary.org/obo/UBERON_0000091) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bile acid binding `http://purl.obolibrary.org/obo/GO_0032052` -#### Removed -- [bile acid binding](http://purl.obolibrary.org/obo/GO_0032052) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36235](http://purl.obolibrary.org/obo/CHEBI_36235)) - -- [bile acid binding](http://purl.obolibrary.org/obo/GO_0032052) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36235](http://purl.obolibrary.org/obo/CHEBI_36235) - -#### Added -- [bile acid binding](http://purl.obolibrary.org/obo/GO_0032052) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36235](http://purl.obolibrary.org/obo/CHEBI_36235)) - -- [bile acid binding](http://purl.obolibrary.org/obo/GO_0032052) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36235](http://purl.obolibrary.org/obo/CHEBI_36235) - - -### bile duct `http://purl.obolibrary.org/obo/UBERON_0002394` -#### Removed -- [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### biliary bud `http://purl.obolibrary.org/obo/UBERON_0004912` -#### Removed -- [biliary bud](http://purl.obolibrary.org/obo/UBERON_0004912) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [biliary bud](http://purl.obolibrary.org/obo/UBERON_0004912) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### biliary system `http://purl.obolibrary.org/obo/UBERON_0002294` -#### Removed -- [biliary system](http://purl.obolibrary.org/obo/UBERON_0002294) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [biliary system](http://purl.obolibrary.org/obo/UBERON_0002294) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### biological_process `http://purl.obolibrary.org/obo/GO_0008150` -#### Removed -- [biological_process](http://purl.obolibrary.org/obo/GO_0008150) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this." - -#### Added -- [biological_process](http://purl.obolibrary.org/obo/GO_0008150) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the biological process ontology, this term is recommended for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this." - - -### blastocyst `http://purl.obolibrary.org/obo/UBERON_0000358` -#### Removed -- [blastocyst](http://purl.obolibrary.org/obo/UBERON_0000358) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [blastocyst](http://purl.obolibrary.org/obo/UBERON_0000358) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### blastula `http://purl.obolibrary.org/obo/UBERON_0000307` -#### Removed -- [blastula](http://purl.obolibrary.org/obo/UBERON_0000307) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [blastula](http://purl.obolibrary.org/obo/UBERON_0000307) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### blastula stage `http://purl.obolibrary.org/obo/UBERON_0000108` -#### Removed -- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### blood coagulation `http://purl.obolibrary.org/obo/GO_0007596` -#### Removed -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://www.graylab.ac.uk/omd/" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:0198506732" - -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) EquivalentTo [coagulation](http://purl.obolibrary.org/obo/GO_0050817) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [blood clot](http://purl.obolibrary.org/obo/UBERON_0010210)) - -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [blood clot](http://purl.obolibrary.org/obo/UBERON_0010210) - -#### Added -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30700128" - -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) EquivalentTo [coagulation](http://purl.obolibrary.org/obo/GO_0050817) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [blood clot](http://purl.obolibrary.org/obo/UBERON_0010210)) - -- [blood coagulation](http://purl.obolibrary.org/obo/GO_0007596) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [blood clot](http://purl.obolibrary.org/obo/UBERON_0010210) - - -### blood island `http://purl.obolibrary.org/obo/UBERON_0003061` -#### Removed -- [blood island](http://purl.obolibrary.org/obo/UBERON_0003061) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "blood islands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [blood island](http://purl.obolibrary.org/obo/UBERON_0003061) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "blood islands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### blood lymphocyte `http://purl.obolibrary.org/obo/CL_4030029` -#### Removed -- [blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030029) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### blood vasculature `http://purl.obolibrary.org/obo/UBERON_0004537` -#### Removed -- [blood vasculature](http://purl.obolibrary.org/obo/UBERON_0004537) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [blood vasculature](http://purl.obolibrary.org/obo/UBERON_0004537) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [blood vasculature](http://purl.obolibrary.org/obo/UBERON_0004537) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [blood vasculature](http://purl.obolibrary.org/obo/UBERON_0004537) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### blood vessel `http://purl.obolibrary.org/obo/UBERON_0001981` -#### Removed -- [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### blood vessel elastic tissue `http://purl.obolibrary.org/obo/UBERON_0003614` -#### Removed -- [blood vessel elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003614) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "elastic laminae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0006083" - -- [blood vessel elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003614) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vascular elastic laminae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [blood vessel elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003614) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "elastic laminae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0006083" - -- [blood vessel elastic tissue](http://purl.obolibrary.org/obo/UBERON_0003614) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vascular elastic laminae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### blood vessel layer `http://purl.obolibrary.org/obo/UBERON_0004797` -#### Removed -- [blood vessel layer](http://purl.obolibrary.org/obo/UBERON_0004797) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/61/Blood_vessels.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [blood vessel layer](http://purl.obolibrary.org/obo/UBERON_0004797) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/61/Blood_vessels.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### blood vessel smooth muscle `http://purl.obolibrary.org/obo/UBERON_0004237` - -#### Added -- [blood vessel smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004237) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [blood vessel smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004237) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### body of stomach `http://purl.obolibrary.org/obo/UBERON_0001161` -#### Removed -- [body of stomach](http://purl.obolibrary.org/obo/UBERON_0001161) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [body of stomach](http://purl.obolibrary.org/obo/UBERON_0001161) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### body proper `http://purl.obolibrary.org/obo/UBERON_0013702` - -#### Added -- [body proper](http://purl.obolibrary.org/obo/UBERON_0013702) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [body proper](http://purl.obolibrary.org/obo/UBERON_0013702) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### bone element `http://purl.obolibrary.org/obo/UBERON_0001474` -#### Removed -- [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001514" - -#### Added -- [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001514" - - -### bone foramen `http://purl.obolibrary.org/obo/UBERON_0005744` -#### Removed -- [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bone fossa `http://purl.obolibrary.org/obo/UBERON_0004704` -#### Removed -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "fossae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "concavities" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "depressions" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "fossae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "depressions" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "concavities" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001743" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### bone marrow `http://purl.obolibrary.org/obo/UBERON_0002371` -#### Removed -- [bone marrow](http://purl.obolibrary.org/obo/UBERON_0002371) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bone marrow](http://purl.obolibrary.org/obo/UBERON_0002371) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bone marrow macrophage `http://purl.obolibrary.org/obo/CL_0002476` -#### Removed -- [bone marrow macrophage](http://purl.obolibrary.org/obo/CL_0002476) SubClassOf [bone marrow hematopoietic cell](http://purl.obolibrary.org/obo/CL_1001610) - -#### Added -- [bone marrow macrophage](http://purl.obolibrary.org/obo/CL_0002476) SubClassOf [mononuclear cell of bone marrow](http://purl.obolibrary.org/obo/CL_0010004) - - -### bony labyrinth `http://purl.obolibrary.org/obo/UBERON_0001839` -#### Removed -- [bony labyrinth](http://purl.obolibrary.org/obo/UBERON_0001839) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray920.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bony labyrinth](http://purl.obolibrary.org/obo/UBERON_0001839) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray920.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bony projection `http://purl.obolibrary.org/obo/UBERON_0004530` -#### Removed -- [bony projection](http://purl.obolibrary.org/obo/UBERON_0004530) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony projections" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001637" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [bony projection](http://purl.obolibrary.org/obo/UBERON_0004530) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony projections" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001637" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### bony vertebral centrum `http://purl.obolibrary.org/obo/UBERON_0001075` -#### Removed -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/63/Corpusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vertebral centra" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "corpus vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Body_of_vertebra" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "centra" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "corpus vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Body_of_vertebra" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/63/Corpusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vertebral centra" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "centra" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### brachial nerve plexus `http://purl.obolibrary.org/obo/UBERON_0001814` -#### Removed -- [brachial nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001814) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c9/Brachial_plexus_color.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brachial nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001814) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray808.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [brachial nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001814) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c9/Brachial_plexus_color.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brachial nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001814) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray808.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### brachiocephalic artery `http://purl.obolibrary.org/obo/UBERON_0001529` -#### Removed -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### brachiocephalic vein `http://purl.obolibrary.org/obo/UBERON_0003711` -#### Removed -- [brachiocephalic vein](http://purl.obolibrary.org/obo/UBERON_0003711) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [brachiocephalic vein](http://purl.obolibrary.org/obo/UBERON_0003711) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### brain `http://purl.obolibrary.org/obo/UBERON_0000955` -#### Removed -- [brain](http://purl.obolibrary.org/obo/UBERON_0000955) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [brain](http://purl.obolibrary.org/obo/UBERON_0000955) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [brain](http://purl.obolibrary.org/obo/UBERON_0000955) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brain](http://purl.obolibrary.org/obo/UBERON_0000955) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### brain ventricle `http://purl.obolibrary.org/obo/UBERON_0004086` -#### Removed -- [brain ventricle](http://purl.obolibrary.org/obo/UBERON_0004086) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brain ventricles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [brain ventricle](http://purl.obolibrary.org/obo/UBERON_0004086) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brain ventricles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### brainstem `http://purl.obolibrary.org/obo/UBERON_0002298` -#### Removed -- [brainstem](http://purl.obolibrary.org/obo/UBERON_0002298) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [brainstem](http://purl.obolibrary.org/obo/UBERON_0002298) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### breast `http://purl.obolibrary.org/obo/UBERON_0000310` -#### Removed -- [breast](http://purl.obolibrary.org/obo/UBERON_0000310) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Closeup_of_female_breast.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [breast](http://purl.obolibrary.org/obo/UBERON_0000310) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Closeup_of_female_breast.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bronchial artery `http://purl.obolibrary.org/obo/UBERON_0002040` -#### Removed -- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray1032.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray1032.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bronchiole `http://purl.obolibrary.org/obo/UBERON_0002186` -#### Removed -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bronchioli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bronchioli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bronchopulmonary segment `http://purl.obolibrary.org/obo/UBERON_8600017` - -#### Added -- [bronchopulmonary segment](http://purl.obolibrary.org/obo/UBERON_8600017) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [bronchopulmonary segment](http://purl.obolibrary.org/obo/UBERON_8600017) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### bronchus `http://purl.obolibrary.org/obo/UBERON_0002185` -#### Removed -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/18/Respiratory_system_complete_numbered.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "bronchi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -#### Added -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/18/Respiratory_system_complete_numbered.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "bronchi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### brown adipose tissue `http://purl.obolibrary.org/obo/UBERON_0001348` -#### Removed -- [brown adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001348) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/69/Brownfat_PETCT.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brown adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001348) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "BAT" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Brown_adipose_tissue" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [brown adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001348) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/69/Brownfat_PETCT.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [brown adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001348) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "BAT" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Brown_adipose_tissue" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### brown fat cell `http://purl.obolibrary.org/obo/CL_0000449` -#### Removed -- [brown fat cell](http://purl.obolibrary.org/obo/CL_0000449) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brown adipocyte" - -- [brown fat cell](http://purl.obolibrary.org/obo/CL_0000449) [label](http://www.w3.org/2000/01/rdf-schema#label) "brown fat cell" - -#### Added -- [brown fat cell](http://purl.obolibrary.org/obo/CL_0000449) [label](http://www.w3.org/2000/01/rdf-schema#label) "brown adipocyte" - -- [brown fat cell](http://purl.obolibrary.org/obo/CL_0000449) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "brown fat cell" - - -### buccopharyngeal membrane `http://purl.obolibrary.org/obo/UBERON_0006211` -#### Removed -- [buccopharyngeal membrane](http://purl.obolibrary.org/obo/UBERON_0006211) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [buccopharyngeal membrane](http://purl.obolibrary.org/obo/UBERON_0006211) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bulbus cordis `http://purl.obolibrary.org/obo/UBERON_0004706` -#### Removed -- [bulbus cordis](http://purl.obolibrary.org/obo/UBERON_0004706) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c9/Gray466.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bulbus cordis](http://purl.obolibrary.org/obo/UBERON_0004706) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c9/Gray466.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### bundle of His `http://purl.obolibrary.org/obo/UBERON_0002353` -#### Removed -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "AVB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b6/ECG_Principle_fast.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "AVB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [bundle of His](http://purl.obolibrary.org/obo/UBERON_0002353) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b6/ECG_Principle_fast.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cadherin binding `http://purl.obolibrary.org/obo/GO_0045296` -#### Removed -- [cadherin binding](http://purl.obolibrary.org/obo/GO_0045296) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [cadherin](http://purl.obolibrary.org/obo/PR_000001327)) - -- [cadherin binding](http://purl.obolibrary.org/obo/GO_0045296) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [cadherin](http://purl.obolibrary.org/obo/PR_000001327) - -#### Added -- [cadherin binding](http://purl.obolibrary.org/obo/GO_0045296) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cadherin](http://purl.obolibrary.org/obo/PR_000001327)) - -- [cadherin binding](http://purl.obolibrary.org/obo/GO_0045296) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cadherin](http://purl.obolibrary.org/obo/PR_000001327) - - -### caecum `http://purl.obolibrary.org/obo/UBERON_0001153` -#### Removed -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "caeca" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBITaxon:8782" - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "ceca" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBITaxon:8782" - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -#### Added -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "ceca" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBITaxon:8782" - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "caeca" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBITaxon:8782" - -- [caecum](http://purl.obolibrary.org/obo/UBERON_0001153) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### calcareous tooth `http://purl.obolibrary.org/obo/UBERON_0001091` -#### Removed -- [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "we place ZFA ctb 5 tooth here for now. Consider changing name from calcaeeous tooth. Note that sea cucumbers develop calcareous tooth-like structures" - -- [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE we place ZFA ctb 5 tooth here for now. Consider changing name from calcaeeous tooth. Note that sea cucumbers develop calcareous tooth-like structures" - - -### calcitonin binding `http://purl.obolibrary.org/obo/GO_0032841` -#### Removed -- [calcitonin binding](http://purl.obolibrary.org/obo/GO_0032841) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306)) - -- [calcitonin binding](http://purl.obolibrary.org/obo/GO_0032841) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306) - -#### Added -- [calcitonin binding](http://purl.obolibrary.org/obo/GO_0032841) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306)) - -- [calcitonin binding](http://purl.obolibrary.org/obo/GO_0032841) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306) - - -### calcitonin receptor activity `http://purl.obolibrary.org/obo/GO_0004948` -#### Removed -- [calcitonin receptor activity](http://purl.obolibrary.org/obo/GO_0004948) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306)) - -- [calcitonin receptor activity](http://purl.obolibrary.org/obo/GO_0004948) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306) - -#### Added -- [calcitonin receptor activity](http://purl.obolibrary.org/obo/GO_0004948) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306)) - -- [calcitonin receptor activity](http://purl.obolibrary.org/obo/GO_0004948) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3306](http://purl.obolibrary.org/obo/CHEBI_3306) - - -### calcium ion binding `http://purl.obolibrary.org/obo/GO_0005509` -#### Removed -- [calcium ion binding](http://purl.obolibrary.org/obo/GO_0005509) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108)) - -- [calcium ion binding](http://purl.obolibrary.org/obo/GO_0005509) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108) - -#### Added -- [calcium ion binding](http://purl.obolibrary.org/obo/GO_0005509) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108)) - -- [calcium ion binding](http://purl.obolibrary.org/obo/GO_0005509) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108) - - -### camera-type eye `http://purl.obolibrary.org/obo/UBERON_0000019` -#### Removed -- [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "eyes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000107" - -#### Added -- [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "eyes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000107" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### capillary `http://purl.obolibrary.org/obo/UBERON_0001982` -#### Removed -- [capillary](http://purl.obolibrary.org/obo/UBERON_0001982) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/A_red_blood_cell_in_a_capillary,_pancreatic_tissue_-_TEM.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [capillary](http://purl.obolibrary.org/obo/UBERON_0001982) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/A_red_blood_cell_in_a_capillary,_pancreatic_tissue_-_TEM.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### capsule of lens `http://purl.obolibrary.org/obo/UBERON_0001804` -#### Removed -- [capsule of lens](http://purl.obolibrary.org/obo/UBERON_0001804) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [capsule of lens](http://purl.obolibrary.org/obo/UBERON_0001804) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### capsule of liver `http://purl.obolibrary.org/obo/UBERON_0016479` -#### Removed -- [capsule of liver](http://purl.obolibrary.org/obo/UBERON_0016479) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb" - -- [capsule of liver](http://purl.obolibrary.org/obo/UBERON_0016479) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb" - -#### Added -- [capsule of liver](http://purl.obolibrary.org/obo/UBERON_0016479) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [capsule of liver](http://purl.obolibrary.org/obo/UBERON_0016479) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### capsule of lymph node `http://purl.obolibrary.org/obo/UBERON_0002194` -#### Removed -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/92/Lymphknoten_(Schwein).jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -#### Added -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/92/Lymphknoten_(Schwein).jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### carbohydrate binding `http://purl.obolibrary.org/obo/GO_0030246` -#### Removed -- [carbohydrate binding](http://purl.obolibrary.org/obo/GO_0030246) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - -- [carbohydrate binding](http://purl.obolibrary.org/obo/GO_0030246) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646) - -#### Added -- [carbohydrate binding](http://purl.obolibrary.org/obo/GO_0030246) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - -- [carbohydrate binding](http://purl.obolibrary.org/obo/GO_0030246) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646) - - -### carbohydrate derivative binding `http://purl.obolibrary.org/obo/GO_0097367` -#### Removed -- [carbohydrate derivative binding](http://purl.obolibrary.org/obo/GO_0097367) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_63299](http://purl.obolibrary.org/obo/CHEBI_63299)) - -- [carbohydrate derivative binding](http://purl.obolibrary.org/obo/GO_0097367) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_63299](http://purl.obolibrary.org/obo/CHEBI_63299) - -#### Added -- [carbohydrate derivative binding](http://purl.obolibrary.org/obo/GO_0097367) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_63299](http://purl.obolibrary.org/obo/CHEBI_63299)) - -- [carbohydrate derivative binding](http://purl.obolibrary.org/obo/GO_0097367) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_63299](http://purl.obolibrary.org/obo/CHEBI_63299) - - -### carboxylic acid binding `http://purl.obolibrary.org/obo/GO_0031406` -#### Removed -- [carboxylic acid binding](http://purl.obolibrary.org/obo/GO_0031406) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29067](http://purl.obolibrary.org/obo/CHEBI_29067)) - -- [carboxylic acid binding](http://purl.obolibrary.org/obo/GO_0031406) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29067](http://purl.obolibrary.org/obo/CHEBI_29067) - -#### Added -- [carboxylic acid binding](http://purl.obolibrary.org/obo/GO_0031406) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29067](http://purl.obolibrary.org/obo/CHEBI_29067)) - -- [carboxylic acid binding](http://purl.obolibrary.org/obo/GO_0031406) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29067](http://purl.obolibrary.org/obo/CHEBI_29067) - - -### cardia of stomach `http://purl.obolibrary.org/obo/UBERON_0001162` -#### Removed -- [cardia of stomach](http://purl.obolibrary.org/obo/UBERON_0001162) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cardia of stomach](http://purl.obolibrary.org/obo/UBERON_0001162) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cardiac Purkinje fiber `http://purl.obolibrary.org/obo/UBERON_0002354` -#### Removed -- [cardiac Purkinje fiber](http://purl.obolibrary.org/obo/UBERON_0002354) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cardiac Purkinje fiber](http://purl.obolibrary.org/obo/UBERON_0002354) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cardiac atrium `http://purl.obolibrary.org/obo/UBERON_0002081` -#### Removed -- [cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cardiac atria" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "atria" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cardiac atria" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "atria" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cardiac ganglion `http://purl.obolibrary.org/obo/UBERON_0014463` -#### Removed -- [cardiac ganglion](http://purl.obolibrary.org/obo/UBERON_0014463) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cardiac ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cardiac ganglion](http://purl.obolibrary.org/obo/UBERON_0014463) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cardiac ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cardiac ganglion](http://purl.obolibrary.org/obo/UBERON_0014463) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [cardiac ganglion](http://purl.obolibrary.org/obo/UBERON_0014463) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### cardiac nerve plexus `http://purl.obolibrary.org/obo/UBERON_0002008` -#### Removed -- [cardiac nerve plexus](http://purl.obolibrary.org/obo/UBERON_0002008) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cardiac nerve plexus](http://purl.obolibrary.org/obo/UBERON_0002008) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cardiac septum `http://purl.obolibrary.org/obo/UBERON_0002099` -#### Removed -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cardiac septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spiral septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004141" - -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "heart septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cardiac septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spiral septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004141" - -- [cardiac septum](http://purl.obolibrary.org/obo/UBERON_0002099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "heart septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cardiac skeleton `http://purl.obolibrary.org/obo/UBERON_0004292` -#### Removed -- [cardiac skeleton](http://purl.obolibrary.org/obo/UBERON_0004292) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray495.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cardiac skeleton](http://purl.obolibrary.org/obo/UBERON_0004292) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/50/Gray495.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cardiac vein `http://purl.obolibrary.org/obo/UBERON_0004148` -#### Removed -- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cardiovascular system `http://purl.obolibrary.org/obo/UBERON_0004535` - -#### Added -- [cardiovascular system](http://purl.obolibrary.org/obo/UBERON_0004535) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [cardiovascular system](http://purl.obolibrary.org/obo/UBERON_0004535) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### cardiovascular system endothelium `http://purl.obolibrary.org/obo/UBERON_0004852` -#### Removed -- [cardiovascular system endothelium](http://purl.obolibrary.org/obo/UBERON_0004852) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endothelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001639" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [cardiovascular system endothelium](http://purl.obolibrary.org/obo/UBERON_0004852) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vascular endothelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000356" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cardiovascular system endothelium](http://purl.obolibrary.org/obo/UBERON_0004852) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endothelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001639" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cardiovascular system endothelium](http://purl.obolibrary.org/obo/UBERON_0004852) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vascular endothelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000356" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### carotid canal `http://purl.obolibrary.org/obo/UBERON_0006668` -#### Removed -- [carotid canal](http://purl.obolibrary.org/obo/UBERON_0006668) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Gray141.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [carotid canal](http://purl.obolibrary.org/obo/UBERON_0006668) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Gray141.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### carpal bone `http://purl.obolibrary.org/obo/UBERON_0001435` -#### Removed -- [carpal bone](http://purl.obolibrary.org/obo/UBERON_0001435) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [carpal bone](http://purl.obolibrary.org/obo/UBERON_0001435) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### carpal region `http://purl.obolibrary.org/obo/UBERON_0004452` -#### Removed -- [carpal region](http://purl.obolibrary.org/obo/UBERON_0004452) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cc/Hand_parts.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [carpal region](http://purl.obolibrary.org/obo/UBERON_0004452) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Human_wrist.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [carpal region](http://purl.obolibrary.org/obo/UBERON_0004452) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Human_wrist.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [carpal region](http://purl.obolibrary.org/obo/UBERON_0004452) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cc/Hand_parts.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### carpal skeleton `http://purl.obolibrary.org/obo/UBERON_0009880` -#### Removed -- [carpal skeleton](http://purl.obolibrary.org/obo/UBERON_0009880) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [carpal skeleton](http://purl.obolibrary.org/obo/UBERON_0009880) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### carpometacarpal joint `http://purl.obolibrary.org/obo/UBERON_0011119` -#### Removed -- [carpometacarpal joint](http://purl.obolibrary.org/obo/UBERON_0011119) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray335.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [carpometacarpal joint](http://purl.obolibrary.org/obo/UBERON_0011119) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray335.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cartilage of bronchus `http://purl.obolibrary.org/obo/UBERON_0001956` -#### Removed -- [cartilage of bronchus](http://purl.obolibrary.org/obo/UBERON_0001956) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cartilagines bronchiales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cartilage of bronchus](http://purl.obolibrary.org/obo/UBERON_0001956) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cartilagines bronchiales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cartilage tissue `http://purl.obolibrary.org/obo/UBERON_0002418` -#### Removed -- [cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0002418) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0002418) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### catalytic activity, acting on DNA `http://purl.obolibrary.org/obo/GO_0140097` -#### Removed -- [catalytic activity, acting on DNA](http://purl.obolibrary.org/obo/GO_0140097) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991)) - -- [catalytic activity, acting on DNA](http://purl.obolibrary.org/obo/GO_0140097) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991) - -#### Added -- [catalytic activity, acting on DNA](http://purl.obolibrary.org/obo/GO_0140097) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991)) - -- [catalytic activity, acting on DNA](http://purl.obolibrary.org/obo/GO_0140097) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16991](http://purl.obolibrary.org/obo/CHEBI_16991) - - -### catalytic activity, acting on RNA `http://purl.obolibrary.org/obo/GO_0140098` -#### Removed -- [catalytic activity, acting on RNA](http://purl.obolibrary.org/obo/GO_0140098) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697)) - -- [catalytic activity, acting on RNA](http://purl.obolibrary.org/obo/GO_0140098) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697) - -#### Added -- [catalytic activity, acting on RNA](http://purl.obolibrary.org/obo/GO_0140098) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697)) - -- [catalytic activity, acting on RNA](http://purl.obolibrary.org/obo/GO_0140098) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33697](http://purl.obolibrary.org/obo/CHEBI_33697) - - -### catalytic activity, acting on a glycoprotein `http://purl.obolibrary.org/obo/GO_0140103` -#### Removed -- [catalytic activity, acting on a glycoprotein](http://purl.obolibrary.org/obo/GO_0140103) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - -- [catalytic activity, acting on a glycoprotein](http://purl.obolibrary.org/obo/GO_0140103) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089) - -#### Added -- [catalytic activity, acting on a glycoprotein](http://purl.obolibrary.org/obo/GO_0140103) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - -- [catalytic activity, acting on a glycoprotein](http://purl.obolibrary.org/obo/GO_0140103) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089) - - -### catalytic activity, acting on a nucleic acid `http://purl.obolibrary.org/obo/GO_0140640` -#### Removed -- [catalytic activity, acting on a nucleic acid](http://purl.obolibrary.org/obo/GO_0140640) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696)) - -- [catalytic activity, acting on a nucleic acid](http://purl.obolibrary.org/obo/GO_0140640) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696) - -#### Added -- [catalytic activity, acting on a nucleic acid](http://purl.obolibrary.org/obo/GO_0140640) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696)) - -- [catalytic activity, acting on a nucleic acid](http://purl.obolibrary.org/obo/GO_0140640) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696) - - -### catalytic activity, acting on a protein `http://purl.obolibrary.org/obo/GO_0140096` -#### Removed -- [catalytic activity, acting on a protein](http://purl.obolibrary.org/obo/GO_0140096) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein](http://purl.obolibrary.org/obo/PR_000000001)) - -- [catalytic activity, acting on a protein](http://purl.obolibrary.org/obo/GO_0140096) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein](http://purl.obolibrary.org/obo/PR_000000001) - -#### Added -- [catalytic activity, acting on a protein](http://purl.obolibrary.org/obo/GO_0140096) EquivalentTo [catalytic activity](http://purl.obolibrary.org/obo/GO_0003824) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein](http://purl.obolibrary.org/obo/PR_000000001)) - -- [catalytic activity, acting on a protein](http://purl.obolibrary.org/obo/GO_0140096) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein](http://purl.obolibrary.org/obo/PR_000000001) - - -### catecholamine binding `http://purl.obolibrary.org/obo/GO_1901338` -#### Removed -- [catecholamine binding](http://purl.obolibrary.org/obo/GO_1901338) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - -- [catecholamine binding](http://purl.obolibrary.org/obo/GO_1901338) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567) - -#### Added -- [catecholamine binding](http://purl.obolibrary.org/obo/GO_1901338) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - -- [catecholamine binding](http://purl.obolibrary.org/obo/GO_1901338) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567) - - -### caudal vertebra `http://purl.obolibrary.org/obo/UBERON_0001095` -#### Removed -- [caudal vertebra](http://purl.obolibrary.org/obo/UBERON_0001095) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "caudal vertebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [caudal vertebra](http://purl.obolibrary.org/obo/UBERON_0001095) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "caudal vertebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### caudate nucleus `http://purl.obolibrary.org/obo/UBERON_0001873` -#### Removed -- [caudate nucleus](http://purl.obolibrary.org/obo/UBERON_0001873) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [caudate nucleus](http://purl.obolibrary.org/obo/UBERON_0001873) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [caudate nucleus](http://purl.obolibrary.org/obo/UBERON_0001873) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [caudate nucleus](http://purl.obolibrary.org/obo/UBERON_0001873) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### cavitated compound organ `http://purl.obolibrary.org/obo/UBERON_0000489` -#### Removed -- [cavitated compound organ](http://purl.obolibrary.org/obo/UBERON_0000489) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cavitated compound organs" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001490" - -#### Added -- [cavitated compound organ](http://purl.obolibrary.org/obo/UBERON_0000489) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cavitated compound organs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001490" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### celiac artery `http://purl.obolibrary.org/obo/UBERON_0001640` -#### Removed -- [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cell cortex `http://purl.obolibrary.org/obo/GO_0005938` - -#### Added -- [cell cortex](http://purl.obolibrary.org/obo/GO_0005938) [term tracker item](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/geneontology/go-ontology/issues/26298"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cell cortex](http://purl.obolibrary.org/obo/GO_0005938) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "ectoplasm" - - -### cell part morphogenesis `http://purl.obolibrary.org/obo/GO_0032990` -#### Removed -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0032990" - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) [label](http://www.w3.org/2000/01/rdf-schema#label) "cell part morphogenesis" - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The process in which the anatomical structures of a cell part are generated and organized." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- Class: [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) EquivalentTo [anatomical structure morphogenesis](http://purl.obolibrary.org/obo/GO_0009653) and ([results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular anatomical entity](http://purl.obolibrary.org/obo/GO_0110165)) - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) SubClassOf [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) - -- [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) SubClassOf [results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular anatomical entity](http://purl.obolibrary.org/obo/GO_0110165) - - - -### cell projection morphogenesis `http://purl.obolibrary.org/obo/GO_0048858` -#### Removed -- [cell projection morphogenesis](http://purl.obolibrary.org/obo/GO_0048858) SubClassOf [cell part morphogenesis](http://purl.obolibrary.org/obo/GO_0032990) - -#### Added -- [cell projection morphogenesis](http://purl.obolibrary.org/obo/GO_0048858) SubClassOf [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) - - -### cell projection organization `http://purl.obolibrary.org/obo/GO_0030030` -#### Removed -- [cell projection organization](http://purl.obolibrary.org/obo/GO_0030030) SubClassOf [cell population proliferation](http://purl.obolibrary.org/obo/GO_0008283) - -#### Added -- [cell projection organization](http://purl.obolibrary.org/obo/GO_0030030) [term tracker item](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/geneontology/go-ontology/issues/26279"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cell-cell junction disassembly `http://purl.obolibrary.org/obo/GO_0150147` -#### Removed -- [cell-cell junction disassembly](http://purl.obolibrary.org/obo/GO_0150147) EquivalentTo [cell junction disassembly](http://purl.obolibrary.org/obo/GO_0150146) and ([results in disassembly of](http://purl.obolibrary.org/obo/RO_0002590) some [cell-cell junction](http://purl.obolibrary.org/obo/GO_0005911)) - -#### Added -- [cell-cell junction disassembly](http://purl.obolibrary.org/obo/GO_0150147) EquivalentTo [cellular component disassembly](http://purl.obolibrary.org/obo/GO_0022411) and ([results in disassembly of](http://purl.obolibrary.org/obo/RO_0002590) some [cell-cell junction](http://purl.obolibrary.org/obo/GO_0005911)) - - -### cellular component morphogenesis `http://purl.obolibrary.org/obo/GO_0032989` -#### Removed -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [label](http://www.w3.org/2000/01/rdf-schema#label) "cellular component morphogenesis" - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The process in which cellular structures, including whole cells or cell parts, are generated and organized." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tb" - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) EquivalentTo [anatomical structure morphogenesis](http://purl.obolibrary.org/obo/GO_0009653) and ([results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular_component](http://purl.obolibrary.org/obo/GO_0005575)) - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) SubClassOf [results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) - -#### Added -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [term tracker item](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/geneontology/go-ontology/issues/26249"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cellular component morphogenesis" - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [label](http://www.w3.org/2000/01/rdf-schema#label) "cellular anatomical entity morphogenesis" - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The process in which a cellular entity is generated and organized. A cellular entity has granularity above the level of a protein complex but below that of an anatomical system." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tb" - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) EquivalentTo [anatomical structure morphogenesis](http://purl.obolibrary.org/obo/GO_0009653) and ([results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular anatomical entity](http://purl.obolibrary.org/obo/GO_0110165)) - -- [cellular component morphogenesis](http://purl.obolibrary.org/obo/GO_0032989) SubClassOf [results in morphogenesis of](http://purl.obolibrary.org/obo/RO_0002298) some [cellular anatomical entity](http://purl.obolibrary.org/obo/GO_0110165) - - -### cellular response to ATP `http://purl.obolibrary.org/obo/GO_0071318` -#### Removed -- [cellular response to ATP](http://purl.obolibrary.org/obo/GO_0071318) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) - -#### Added -- [cellular response to ATP](http://purl.obolibrary.org/obo/GO_0071318) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) - - -### cellular response to L-glutamate `http://purl.obolibrary.org/obo/GO_1905232` -#### Removed -- [cellular response to L-glutamate](http://purl.obolibrary.org/obo/GO_1905232) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985)) - -#### Added -- [cellular response to L-glutamate](http://purl.obolibrary.org/obo/GO_1905232) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985)) - - -### cellular response to acetylcholine `http://purl.obolibrary.org/obo/GO_1905145` -#### Removed -- [cellular response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905145) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) - -#### Added -- [cellular response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905145) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) - - -### cellular response to aldehyde `http://purl.obolibrary.org/obo/GO_0110096` -#### Removed -- [cellular response to aldehyde](http://purl.obolibrary.org/obo/GO_0110096) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17478](http://purl.obolibrary.org/obo/CHEBI_17478)) - -- [cellular response to aldehyde](http://purl.obolibrary.org/obo/GO_0110096) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17478](http://purl.obolibrary.org/obo/CHEBI_17478) - -#### Added -- [cellular response to aldehyde](http://purl.obolibrary.org/obo/GO_0110096) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17478](http://purl.obolibrary.org/obo/CHEBI_17478)) - -- [cellular response to aldehyde](http://purl.obolibrary.org/obo/GO_0110096) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17478](http://purl.obolibrary.org/obo/CHEBI_17478) - - -### cellular response to aldosterone `http://purl.obolibrary.org/obo/GO_1904045` -#### Removed -- [cellular response to aldosterone](http://purl.obolibrary.org/obo/GO_1904045) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584)) - -#### Added -- [cellular response to aldosterone](http://purl.obolibrary.org/obo/GO_1904045) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584)) - - -### cellular response to amine stimulus `http://purl.obolibrary.org/obo/GO_0071418` -#### Removed -- [cellular response to amine stimulus](http://purl.obolibrary.org/obo/GO_0071418) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) - -#### Added -- [cellular response to amine stimulus](http://purl.obolibrary.org/obo/GO_0071418) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) - - -### cellular response to amino acid stimulus `http://purl.obolibrary.org/obo/GO_0071230` -#### Removed -- [cellular response to amino acid stimulus](http://purl.obolibrary.org/obo/GO_0071230) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) - -#### Added -- [cellular response to amino acid stimulus](http://purl.obolibrary.org/obo/GO_0071230) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) - - -### cellular response to ammonium ion `http://purl.obolibrary.org/obo/GO_0071242` -#### Removed -- [cellular response to ammonium ion](http://purl.obolibrary.org/obo/GO_0071242) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) - -#### Added -- [cellular response to ammonium ion](http://purl.obolibrary.org/obo/GO_0071242) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) - - -### cellular response to bile acid `http://purl.obolibrary.org/obo/GO_1903413` -#### Removed -- [cellular response to bile acid](http://purl.obolibrary.org/obo/GO_1903413) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098)) - -#### Added -- [cellular response to bile acid](http://purl.obolibrary.org/obo/GO_1903413) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098)) - - -### cellular response to calcium ion `http://purl.obolibrary.org/obo/GO_0071277` -#### Removed -- [cellular response to calcium ion](http://purl.obolibrary.org/obo/GO_0071277) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_39124](http://purl.obolibrary.org/obo/CHEBI_39124)) - -- [cellular response to calcium ion](http://purl.obolibrary.org/obo/GO_0071277) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_39124](http://purl.obolibrary.org/obo/CHEBI_39124) - -#### Added -- [cellular response to calcium ion](http://purl.obolibrary.org/obo/GO_0071277) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_39124](http://purl.obolibrary.org/obo/CHEBI_39124)) - -- [cellular response to calcium ion](http://purl.obolibrary.org/obo/GO_0071277) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_39124](http://purl.obolibrary.org/obo/CHEBI_39124) - - -### cellular response to carbohydrate stimulus `http://purl.obolibrary.org/obo/GO_0071322` -#### Removed -- [cellular response to carbohydrate stimulus](http://purl.obolibrary.org/obo/GO_0071322) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - -#### Added -- [cellular response to carbohydrate stimulus](http://purl.obolibrary.org/obo/GO_0071322) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - - -### cellular response to catecholamine stimulus `http://purl.obolibrary.org/obo/GO_0071870` -#### Removed -- [cellular response to catecholamine stimulus](http://purl.obolibrary.org/obo/GO_0071870) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - -#### Added -- [cellular response to catecholamine stimulus](http://purl.obolibrary.org/obo/GO_0071870) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - - -### cellular response to cholecystokinin `http://purl.obolibrary.org/obo/GO_0061848` -#### Removed -- [cellular response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061848) EquivalentTo [cellular response to stimulus](http://purl.obolibrary.org/obo/GO_0051716) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - -#### Added -- [cellular response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061848) EquivalentTo [cellular response to stimulus](http://purl.obolibrary.org/obo/GO_0051716) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - - -### cellular response to corticosteroid stimulus `http://purl.obolibrary.org/obo/GO_0071384` -#### Removed -- [cellular response to corticosteroid stimulus](http://purl.obolibrary.org/obo/GO_0071384) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36699](http://purl.obolibrary.org/obo/CHEBI_36699)) - -- [cellular response to corticosteroid stimulus](http://purl.obolibrary.org/obo/GO_0071384) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36699](http://purl.obolibrary.org/obo/CHEBI_36699) - -#### Added -- [cellular response to corticosteroid stimulus](http://purl.obolibrary.org/obo/GO_0071384) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36699](http://purl.obolibrary.org/obo/CHEBI_36699)) - -- [cellular response to corticosteroid stimulus](http://purl.obolibrary.org/obo/GO_0071384) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36699](http://purl.obolibrary.org/obo/CHEBI_36699) - - -### cellular response to dopamine `http://purl.obolibrary.org/obo/GO_1903351` -#### Removed -- [cellular response to dopamine](http://purl.obolibrary.org/obo/GO_1903351) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - -#### Added -- [cellular response to dopamine](http://purl.obolibrary.org/obo/GO_1903351) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - - -### cellular response to epinephrine stimulus `http://purl.obolibrary.org/obo/GO_0071872` -#### Removed -- [cellular response to epinephrine stimulus](http://purl.obolibrary.org/obo/GO_0071872) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - -#### Added -- [cellular response to epinephrine stimulus](http://purl.obolibrary.org/obo/GO_0071872) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - - -### cellular response to estradiol stimulus `http://purl.obolibrary.org/obo/GO_0071392` -#### Removed -- [cellular response to estradiol stimulus](http://purl.obolibrary.org/obo/GO_0071392) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - -#### Added -- [cellular response to estradiol stimulus](http://purl.obolibrary.org/obo/GO_0071392) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - - -### cellular response to glucagon stimulus `http://purl.obolibrary.org/obo/GO_0071377` -#### Removed -- [cellular response to glucagon stimulus](http://purl.obolibrary.org/obo/GO_0071377) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - -#### Added -- [cellular response to glucagon stimulus](http://purl.obolibrary.org/obo/GO_0071377) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - - -### cellular response to glucocorticoid stimulus `http://purl.obolibrary.org/obo/GO_0071385` -#### Removed -- [cellular response to glucocorticoid stimulus](http://purl.obolibrary.org/obo/GO_0071385) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - -#### Added -- [cellular response to glucocorticoid stimulus](http://purl.obolibrary.org/obo/GO_0071385) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - - -### cellular response to glucose stimulus `http://purl.obolibrary.org/obo/GO_0071333` -#### Removed -- [cellular response to glucose stimulus](http://purl.obolibrary.org/obo/GO_0071333) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - -#### Added -- [cellular response to glucose stimulus](http://purl.obolibrary.org/obo/GO_0071333) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - - -### cellular response to glycine `http://purl.obolibrary.org/obo/GO_1905430` -#### Removed -- [cellular response to glycine](http://purl.obolibrary.org/obo/GO_1905430) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - -#### Added -- [cellular response to glycine](http://purl.obolibrary.org/obo/GO_1905430) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - - -### cellular response to glycoprotein `http://purl.obolibrary.org/obo/GO_1904588` -#### Removed -- [cellular response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904588) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - -#### Added -- [cellular response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904588) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - - -### cellular response to hexose stimulus `http://purl.obolibrary.org/obo/GO_0071331` -#### Removed -- [cellular response to hexose stimulus](http://purl.obolibrary.org/obo/GO_0071331) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133)) - -#### Added -- [cellular response to hexose stimulus](http://purl.obolibrary.org/obo/GO_0071331) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133)) - - -### cellular response to histamine `http://purl.obolibrary.org/obo/GO_0071420` -#### Removed -- [cellular response to histamine](http://purl.obolibrary.org/obo/GO_0071420) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -#### Added -- [cellular response to histamine](http://purl.obolibrary.org/obo/GO_0071420) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - - -### cellular response to insulin stimulus `http://purl.obolibrary.org/obo/GO_0032869` -#### Removed -- [cellular response to insulin stimulus](http://purl.obolibrary.org/obo/GO_0032869) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -#### Added -- [cellular response to insulin stimulus](http://purl.obolibrary.org/obo/GO_0032869) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - - -### cellular response to iron ion `http://purl.obolibrary.org/obo/GO_0071281` -#### Removed -- [cellular response to iron ion](http://purl.obolibrary.org/obo/GO_0071281) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -#### Added -- [cellular response to iron ion](http://purl.obolibrary.org/obo/GO_0071281) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - - -### cellular response to ketone `http://purl.obolibrary.org/obo/GO_1901655` -#### Removed -- [cellular response to ketone](http://purl.obolibrary.org/obo/GO_1901655) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087)) - -#### Added -- [cellular response to ketone](http://purl.obolibrary.org/obo/GO_1901655) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087)) - - -### cellular response to lipid `http://purl.obolibrary.org/obo/GO_0071396` -#### Removed -- [cellular response to lipid](http://purl.obolibrary.org/obo/GO_0071396) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - -#### Added -- [cellular response to lipid](http://purl.obolibrary.org/obo/GO_0071396) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - - -### cellular response to lipoprotein particle stimulus `http://purl.obolibrary.org/obo/GO_0071402` -#### Removed -- [cellular response to lipoprotein particle stimulus](http://purl.obolibrary.org/obo/GO_0071402) EquivalentTo [cellular response to stimulus](http://purl.obolibrary.org/obo/GO_0051716) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777)) - -- [cellular response to lipoprotein particle stimulus](http://purl.obolibrary.org/obo/GO_0071402) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777) - -#### Added -- [cellular response to lipoprotein particle stimulus](http://purl.obolibrary.org/obo/GO_0071402) EquivalentTo [cellular response to stimulus](http://purl.obolibrary.org/obo/GO_0051716) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777)) - -- [cellular response to lipoprotein particle stimulus](http://purl.obolibrary.org/obo/GO_0071402) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777) - - -### cellular response to mineralocorticoid stimulus `http://purl.obolibrary.org/obo/GO_0071389` -#### Removed -- [cellular response to mineralocorticoid stimulus](http://purl.obolibrary.org/obo/GO_0071389) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354)) - -#### Added -- [cellular response to mineralocorticoid stimulus](http://purl.obolibrary.org/obo/GO_0071389) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354)) - - -### cellular response to nitric oxide `http://purl.obolibrary.org/obo/GO_0071732` -#### Removed -- [cellular response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071732) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480)) - -#### Added -- [cellular response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071732) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480)) - - -### cellular response to nitrogen compound `http://purl.obolibrary.org/obo/GO_1901699` -#### Removed -- [cellular response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901699) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - -#### Added -- [cellular response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901699) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - - -### cellular response to norepinephrine stimulus `http://purl.obolibrary.org/obo/GO_0071874` -#### Removed -- [cellular response to norepinephrine stimulus](http://purl.obolibrary.org/obo/GO_0071874) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - -#### Added -- [cellular response to norepinephrine stimulus](http://purl.obolibrary.org/obo/GO_0071874) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - - -### cellular response to organic cyclic compound `http://purl.obolibrary.org/obo/GO_0071407` -#### Removed -- [cellular response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0071407) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - -#### Added -- [cellular response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0071407) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - - -### cellular response to organonitrogen compound `http://purl.obolibrary.org/obo/GO_0071417` -#### Removed -- [cellular response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0071417) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352)) - -#### Added -- [cellular response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0071417) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352)) - - -### cellular response to oxygen-containing compound `http://purl.obolibrary.org/obo/GO_1901701` -#### Removed -- [cellular response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901701) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806)) - -#### Added -- [cellular response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901701) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806)) - - -### cellular response to peptide `http://purl.obolibrary.org/obo/GO_1901653` -#### Removed -- [cellular response to peptide](http://purl.obolibrary.org/obo/GO_1901653) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -#### Added -- [cellular response to peptide](http://purl.obolibrary.org/obo/GO_1901653) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - - -### cellular response to peptide hormone stimulus `http://purl.obolibrary.org/obo/GO_0071375` -#### Removed -- [cellular response to peptide hormone stimulus](http://purl.obolibrary.org/obo/GO_0071375) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - -#### Added -- [cellular response to peptide hormone stimulus](http://purl.obolibrary.org/obo/GO_0071375) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - - -### cellular response to progesterone stimulus `http://purl.obolibrary.org/obo/GO_0071393` -#### Removed -- [cellular response to progesterone stimulus](http://purl.obolibrary.org/obo/GO_0071393) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026)) - -#### Added -- [cellular response to progesterone stimulus](http://purl.obolibrary.org/obo/GO_0071393) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026)) - - -### cellular response to serotonin `http://purl.obolibrary.org/obo/GO_1904015` -#### Removed -- [cellular response to serotonin](http://purl.obolibrary.org/obo/GO_1904015) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -#### Added -- [cellular response to serotonin](http://purl.obolibrary.org/obo/GO_1904015) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - - -### cellular response to steroid hormone stimulus `http://purl.obolibrary.org/obo/GO_0071383` -#### Removed -- [cellular response to steroid hormone stimulus](http://purl.obolibrary.org/obo/GO_0071383) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -#### Added -- [cellular response to steroid hormone stimulus](http://purl.obolibrary.org/obo/GO_0071383) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - - -### cellular response to superoxide `http://purl.obolibrary.org/obo/GO_0071451` -#### Removed -- [cellular response to superoxide](http://purl.obolibrary.org/obo/GO_0071451) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421)) - -#### Added -- [cellular response to superoxide](http://purl.obolibrary.org/obo/GO_0071451) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421)) - - -### cellular response to testosterone stimulus `http://purl.obolibrary.org/obo/GO_0071394` -#### Removed -- [cellular response to testosterone stimulus](http://purl.obolibrary.org/obo/GO_0071394) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347)) - -#### Added -- [cellular response to testosterone stimulus](http://purl.obolibrary.org/obo/GO_0071394) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347)) - - -### cellular response to vasopressin `http://purl.obolibrary.org/obo/GO_1904117` -#### Removed -- [cellular response to vasopressin](http://purl.obolibrary.org/obo/GO_1904117) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - -#### Added -- [cellular response to vasopressin](http://purl.obolibrary.org/obo/GO_1904117) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - - -### cellular response to water stimulus `http://purl.obolibrary.org/obo/GO_0071462` -#### Removed -- [cellular response to water stimulus](http://purl.obolibrary.org/obo/GO_0071462) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - -#### Added -- [cellular response to water stimulus](http://purl.obolibrary.org/obo/GO_0071462) EquivalentTo [cellular response to chemical stimulus](http://purl.obolibrary.org/obo/GO_0070887) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - - -### cellular_component `http://purl.obolibrary.org/obo/GO_0005575` -#### Removed -- [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the cellular component ontology, this term is recommended for use for the annotation of gene products whose cellular component is unknown. When this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this." - -- [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome)." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIF_Subcellular:sao1337158144" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:pdt" - -#### Added -- [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex)." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:pdt" - -- [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the cellular component ontology, this term is recommended for the annotation of gene products whose cellular component is unknown. When this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this." - -- [cellular_component](http://purl.obolibrary.org/obo/GO_0005575) [term tracker item](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/geneontology/go-ontology/issues/17729"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cementum `http://purl.obolibrary.org/obo/UBERON_0001753` -#### Removed -- [cementum](http://purl.obolibrary.org/obo/UBERON_0001753) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cementum](http://purl.obolibrary.org/obo/UBERON_0001753) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### central canal of spinal cord `http://purl.obolibrary.org/obo/UBERON_0002291` -#### Removed -- [central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002291) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002291) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### central nervous system `http://purl.obolibrary.org/obo/UBERON_0001017` -#### Removed -- [central nervous system](http://purl.obolibrary.org/obo/UBERON_0001017) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CNS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [central nervous system](http://purl.obolibrary.org/obo/UBERON_0001017) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CNS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### central sulcus `http://purl.obolibrary.org/obo/UBERON_0002916` -#### Removed -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:4035" - -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/b6/Central_sulcus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray726_central_sulcus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/b6/Central_sulcus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray726_central_sulcus.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [central sulcus](http://purl.obolibrary.org/obo/UBERON_0002916) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:4035" - - -### cerebellar artery `http://purl.obolibrary.org/obo/UBERON_0003472` -#### Removed -- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e1/CerebellumArteries.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e1/CerebellumArteries.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cerebellar cortex `http://purl.obolibrary.org/obo/UBERON_0002129` -#### Removed -- [cerebellar cortex](http://purl.obolibrary.org/obo/UBERON_0002129) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebellar cortex](http://purl.obolibrary.org/obo/UBERON_0002129) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cerebellum `http://purl.obolibrary.org/obo/UBERON_0002037` -#### Removed -- [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cerebellum fissure `http://purl.obolibrary.org/obo/UBERON_0003980` -#### Removed -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "set of cerebellar fissures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:77789" - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar fissures set" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:77789" - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar fissures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:CBf" - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9406" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9406" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar fissures set" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:77789" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cerebellar fissures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:CBf" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cerebellum fissure](http://purl.obolibrary.org/obo/UBERON_0003980) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "set of cerebellar fissures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:77789" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cerebellum marginal layer `http://purl.obolibrary.org/obo/UBERON_0034708` -#### Removed -- [cerebellum marginal layer](http://purl.obolibrary.org/obo/UBERON_0034708) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MZCB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12695" - -#### Added -- [cerebellum marginal layer](http://purl.obolibrary.org/obo/UBERON_0034708) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MZCB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12695" - - -### cerebral cortex `http://purl.obolibrary.org/obo/UBERON_0000956` -#### Removed -- [cerebral cortex](http://purl.obolibrary.org/obo/UBERON_0000956) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cerebral cortex](http://purl.obolibrary.org/obo/UBERON_0000956) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebral cortex](http://purl.obolibrary.org/obo/UBERON_0000956) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cerebral cortex](http://purl.obolibrary.org/obo/UBERON_0000956) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cerebral cortex marginal layer `http://purl.obolibrary.org/obo/UBERON_0014935` -#### Removed -- [cerebral cortex marginal layer](http://purl.obolibrary.org/obo/UBERON_0014935) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MZ" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0000792" - -#### Added -- [cerebral cortex marginal layer](http://purl.obolibrary.org/obo/UBERON_0014935) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MZ" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0000792" - - -### cerebral hemisphere `http://purl.obolibrary.org/obo/UBERON_0001869` -#### Removed -- [cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0001869) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0001869) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cerebral vein `http://purl.obolibrary.org/obo/UBERON_0001663` -#### Removed -- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Gray568.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Gray568.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cervical dorsal root ganglion `http://purl.obolibrary.org/obo/UBERON_0002834` - -#### Added -- [cervical dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0002834) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [cervical dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0002834) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### cervical lymph node `http://purl.obolibrary.org/obo/UBERON_0002429` -#### Removed -- [cervical lymph node](http://purl.obolibrary.org/obo/UBERON_0002429) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Lymph_node_regions.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cervical lymph node](http://purl.obolibrary.org/obo/UBERON_0002429) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Lymph_node_regions.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cervical vertebra `http://purl.obolibrary.org/obo/UBERON_0002413` -#### Removed -- [cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0002413) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cervical vertebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0002413) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Illu_vertebral_column.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0002413) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Illu_vertebral_column.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0002413) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cervical vertebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### chemokine receptor binding `http://purl.obolibrary.org/obo/GO_0042379` -#### Removed -- [chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0042379) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [chemokine receptor](http://purl.obolibrary.org/obo/PR_000001128)) - -- [chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0042379) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [chemokine receptor](http://purl.obolibrary.org/obo/PR_000001128) - -#### Added -- [chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0042379) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chemokine receptor](http://purl.obolibrary.org/obo/PR_000001128)) - -- [chemokine receptor binding](http://purl.obolibrary.org/obo/GO_0042379) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chemokine receptor](http://purl.obolibrary.org/obo/PR_000001128) - - -### chest `http://purl.obolibrary.org/obo/UBERON_0001443` -#### Removed -- [chest](http://purl.obolibrary.org/obo/UBERON_0001443) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/db/Chest.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [chest](http://purl.obolibrary.org/obo/UBERON_0001443) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/db/Chest.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cholecystokinin receptor activity `http://purl.obolibrary.org/obo/GO_0004951` -#### Removed -- [cholecystokinin receptor activity](http://purl.obolibrary.org/obo/GO_0004951) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - -- [cholecystokinin receptor activity](http://purl.obolibrary.org/obo/GO_0004951) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110) - -#### Added -- [cholecystokinin receptor activity](http://purl.obolibrary.org/obo/GO_0004951) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - -- [cholecystokinin receptor activity](http://purl.obolibrary.org/obo/GO_0004951) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110) - - -### chondrocyte activation `http://purl.obolibrary.org/obo/GO_0044566` -#### Removed -- [chondrocyte activation](http://purl.obolibrary.org/obo/GO_0044566) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [chondrocyte](http://purl.obolibrary.org/obo/CL_0000138)) - -- [chondrocyte activation](http://purl.obolibrary.org/obo/GO_0044566) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [chondrocyte](http://purl.obolibrary.org/obo/CL_0000138) - -#### Added -- [chondrocyte activation](http://purl.obolibrary.org/obo/GO_0044566) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chondrocyte](http://purl.obolibrary.org/obo/CL_0000138)) - -- [chondrocyte activation](http://purl.obolibrary.org/obo/GO_0044566) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chondrocyte](http://purl.obolibrary.org/obo/CL_0000138) - - -### chondroitin sulfate binding `http://purl.obolibrary.org/obo/GO_0035374` -#### Removed -- [chondroitin sulfate binding](http://purl.obolibrary.org/obo/GO_0035374) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_37397](http://purl.obolibrary.org/obo/CHEBI_37397)) - -- [chondroitin sulfate binding](http://purl.obolibrary.org/obo/GO_0035374) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_37397](http://purl.obolibrary.org/obo/CHEBI_37397) - -#### Added -- [chondroitin sulfate binding](http://purl.obolibrary.org/obo/GO_0035374) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_37397](http://purl.obolibrary.org/obo/CHEBI_37397)) - -- [chondroitin sulfate binding](http://purl.obolibrary.org/obo/GO_0035374) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_37397](http://purl.obolibrary.org/obo/CHEBI_37397) - - -### chordate pharyngeal muscle `http://purl.obolibrary.org/obo/UBERON_0000933` -#### Removed -- [chordate pharyngeal muscle](http://purl.obolibrary.org/obo/UBERON_0000933) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "branchial muscles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000172" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [chordate pharyngeal muscle](http://purl.obolibrary.org/obo/UBERON_0000933) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray1030.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [chordate pharyngeal muscle](http://purl.obolibrary.org/obo/UBERON_0000933) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "branchial muscles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000172" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [chordate pharyngeal muscle](http://purl.obolibrary.org/obo/UBERON_0000933) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray1030.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### chorion membrane `http://purl.obolibrary.org/obo/UBERON_0003124` -#### Removed -- [chorion membrane](http://purl.obolibrary.org/obo/UBERON_0003124) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/51/Gray24.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [chorion membrane](http://purl.obolibrary.org/obo/UBERON_0003124) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/51/Gray24.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### chorionic mesenchyme `http://purl.obolibrary.org/obo/UBERON_0003265` -#### Removed -- [chorionic mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003265) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [chorionic mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003265) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - - -### chorionic plate `http://purl.obolibrary.org/obo/UBERON_0004027` -#### Removed -- [chorionic plate](http://purl.obolibrary.org/obo/UBERON_0004027) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" - -#### Added -- [chorionic plate](http://purl.obolibrary.org/obo/UBERON_0004027) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### chorionic plate blood vessel `http://purl.obolibrary.org/obo/UBERON_8600021` - -#### Added -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8600021" - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [label](http://www.w3.org/2000/01/rdf-schema#label) "chorionic plate blood vessel" - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A blood vessel that is part of the chorionic plate." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://www.ncbi.nlm.nih.gov/books/NBK53254/" - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) [date](http://purl.org/dc/terms/date) "2023-09-14T09:09:36Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - -- Class: [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) EquivalentTo [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [chorionic plate](http://purl.obolibrary.org/obo/UBERON_0004027)) - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [chorionic plate](http://purl.obolibrary.org/obo/UBERON_0004027) - -- [chorionic plate blood vessel](http://purl.obolibrary.org/obo/UBERON_8600021) SubClassOf [blood vessel](http://purl.obolibrary.org/obo/UBERON_0001981) - - -### chorionic villus `http://purl.obolibrary.org/obo/UBERON_0007106` -#### Removed -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "placental villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GAID:1300" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "chorionic villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A16.254.403.473.200" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray29.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "placental villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GAID:1300" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "chorionic villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A16.254.403.473.200" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [chorionic villus](http://purl.obolibrary.org/obo/UBERON_0007106) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray29.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### choroid plexus `http://purl.obolibrary.org/obo/UBERON_0001886` -#### Removed -- [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray708.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -- [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray708.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### choroid plexus epithelium `http://purl.obolibrary.org/obo/UBERON_0003911` - -#### Added -- [choroid plexus epithelium](http://purl.obolibrary.org/obo/UBERON_0003911) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006008" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### choroidal melanocyte `http://purl.obolibrary.org/obo/CL_4030000` -#### Removed -- [choroidal melanocyte](http://purl.obolibrary.org/obo/CL_4030000) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### chromaffin paraganglion `http://purl.obolibrary.org/obo/UBERON_0012279` -#### Removed -- [chromaffin paraganglion](http://purl.obolibrary.org/obo/UBERON_0012279) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "chromaffin paraganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A06.224.736" - -#### Added -- [chromaffin paraganglion](http://purl.obolibrary.org/obo/UBERON_0012279) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "chromaffin paraganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A06.224.736" - - -### chromatin binding `http://purl.obolibrary.org/obo/GO_0003682` -#### Removed -- [chromatin binding](http://purl.obolibrary.org/obo/GO_0003682) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [chromatin](http://purl.obolibrary.org/obo/GO_0000785)) - -- [chromatin binding](http://purl.obolibrary.org/obo/GO_0003682) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [chromatin](http://purl.obolibrary.org/obo/GO_0000785) - -#### Added -- [chromatin binding](http://purl.obolibrary.org/obo/GO_0003682) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chromatin](http://purl.obolibrary.org/obo/GO_0000785)) - -- [chromatin binding](http://purl.obolibrary.org/obo/GO_0003682) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [chromatin](http://purl.obolibrary.org/obo/GO_0000785) - - -### ciliary body `http://purl.obolibrary.org/obo/UBERON_0001775` -#### Removed -- [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ciliary bodies" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000102" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ciliary bodies" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000102" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### ciliary muscle `http://purl.obolibrary.org/obo/UBERON_0001605` -#### Removed -- [ciliary muscle](http://purl.obolibrary.org/obo/UBERON_0001605) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ciliary muscle](http://purl.obolibrary.org/obo/UBERON_0001605) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ciliary processes `http://purl.obolibrary.org/obo/UBERON_0010427` -#### Removed -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" - -#### Added -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ciliary processes](http://purl.obolibrary.org/obo/UBERON_0010427) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### circle of Willis `http://purl.obolibrary.org/obo/UBERON_0003709` -#### Removed -- [circle of Willis](http://purl.obolibrary.org/obo/UBERON_0003709) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [circle of Willis](http://purl.obolibrary.org/obo/UBERON_0003709) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### circulatory system `http://purl.obolibrary.org/obo/UBERON_0001009` -#### Removed -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### circumventricular organ `http://purl.obolibrary.org/obo/UBERON_0005408` -#### Removed -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CVO" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NLXANAT:20090312" - -#### Added -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006267" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CVO" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NLXANAT:20090312" - -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### classical monocyte `http://purl.obolibrary.org/obo/CL_0000860` -#### Removed -- [classical monocyte](http://purl.obolibrary.org/obo/CL_0000860) SubClassOf [phagocyte](http://purl.obolibrary.org/obo/CL_0000234) - - - -### clavicle bone `http://purl.obolibrary.org/obo/UBERON_0001105` -#### Removed -- [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### clitoris `http://purl.obolibrary.org/obo/UBERON_0002411` -#### Removed -- [clitoris](http://purl.obolibrary.org/obo/UBERON_0002411) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Clitoris_anatomy_labeled-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [clitoris](http://purl.obolibrary.org/obo/UBERON_0002411) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Clitoris_anatomy_labeled-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cloacal membrane `http://purl.obolibrary.org/obo/UBERON_0006217` -#### Removed -- [cloacal membrane](http://purl.obolibrary.org/obo/UBERON_0006217) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cloacal membrane](http://purl.obolibrary.org/obo/UBERON_0006217) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cloacal sphincter `http://purl.obolibrary.org/obo/UBERON_0013501` -#### Removed -- [cloacal sphincter](http://purl.obolibrary.org/obo/UBERON_0013501) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sphincter cloacae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cloacal sphincter](http://purl.obolibrary.org/obo/UBERON_0013501) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sphincter cloacae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cloacal villus `http://purl.obolibrary.org/obo/UBERON_0012485` -#### Removed -- [cloacal villus](http://purl.obolibrary.org/obo/UBERON_0012485) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cloacal villi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cloacal villus](http://purl.obolibrary.org/obo/UBERON_0012485) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cloacal villi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cochlea `http://purl.obolibrary.org/obo/UBERON_0001844` -#### Removed -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lagenas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000374" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cochleae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lagenas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000374" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [cochlea](http://purl.obolibrary.org/obo/UBERON_0001844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cochleae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cochlear duct of membranous labyrinth `http://purl.obolibrary.org/obo/UBERON_0001855` -#### Removed -- [cochlear duct of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001855) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear duct of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001855) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cochlear ganglion `http://purl.obolibrary.org/obo/UBERON_0000395` -#### Removed -- [cochlear ganglion](http://purl.obolibrary.org/obo/UBERON_0000395) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray903.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear ganglion](http://purl.obolibrary.org/obo/UBERON_0000395) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray903.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cochlear labyrinth `http://purl.obolibrary.org/obo/UBERON_0002499` -#### Removed -- [cochlear labyrinth](http://purl.obolibrary.org/obo/UBERON_0002499) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear labyrinth](http://purl.obolibrary.org/obo/UBERON_0002499) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cochlear modiolus `http://purl.obolibrary.org/obo/UBERON_0006723` -#### Removed -- [cochlear modiolus](http://purl.obolibrary.org/obo/UBERON_0006723) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear modiolus](http://purl.obolibrary.org/obo/UBERON_0006723) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cochlear nuclear complex `http://purl.obolibrary.org/obo/UBERON_0002610` -#### Removed -- [cochlear nuclear complex](http://purl.obolibrary.org/obo/UBERON_0002610) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear nuclear complex](http://purl.obolibrary.org/obo/UBERON_0002610) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cochlear nucleus `http://purl.obolibrary.org/obo/UBERON_0001720` -#### Removed -- [cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0001720) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0001720) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### coelemic cavity lumen `http://purl.obolibrary.org/obo/UBERON_0002323` -#### Removed -- [coelemic cavity lumen](http://purl.obolibrary.org/obo/UBERON_0002323) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "check the FMA placement here; ncit placement of body cavity here probably not correct" - -#### Added -- [coelemic cavity lumen](http://purl.obolibrary.org/obo/UBERON_0002323) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct" - - -### colic artery `http://purl.obolibrary.org/obo/UBERON_0035548` -#### Removed -- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### collagen binding `http://purl.obolibrary.org/obo/GO_0005518` -#### Removed -- [collagen binding](http://purl.obolibrary.org/obo/GO_0005518) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [collagen trimer](http://purl.obolibrary.org/obo/GO_0005581)) - -- [collagen binding](http://purl.obolibrary.org/obo/GO_0005518) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [collagen trimer](http://purl.obolibrary.org/obo/GO_0005581) - -#### Added -- [collagen binding](http://purl.obolibrary.org/obo/GO_0005518) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [collagen trimer](http://purl.obolibrary.org/obo/GO_0005581)) - -- [collagen binding](http://purl.obolibrary.org/obo/GO_0005518) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [collagen trimer](http://purl.obolibrary.org/obo/GO_0005581) - - -### collagen fibril binding `http://purl.obolibrary.org/obo/GO_0098633` -#### Removed -- [collagen fibril binding](http://purl.obolibrary.org/obo/GO_0098633) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [banded collagen fibril](http://purl.obolibrary.org/obo/GO_0098643)) - -- [collagen fibril binding](http://purl.obolibrary.org/obo/GO_0098633) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [banded collagen fibril](http://purl.obolibrary.org/obo/GO_0098643) - -#### Added -- [collagen fibril binding](http://purl.obolibrary.org/obo/GO_0098633) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [banded collagen fibril](http://purl.obolibrary.org/obo/GO_0098643)) - -- [collagen fibril binding](http://purl.obolibrary.org/obo/GO_0098633) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [banded collagen fibril](http://purl.obolibrary.org/obo/GO_0098643) - - -### comma-shaped body `http://purl.obolibrary.org/obo/UBERON_0004198` -#### Removed -- [comma-shaped body](http://purl.obolibrary.org/obo/UBERON_0004198) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CSB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [comma-shaped body](http://purl.obolibrary.org/obo/UBERON_0004198) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CSB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### committed double negative thymocyte (Homo sapiens) `http://purl.obolibrary.org/obo/CL_0009082` -#### Removed -- [committed double negative thymocyte (Homo sapiens)](http://purl.obolibrary.org/obo/CL_0009082) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - - -### common bile duct `http://purl.obolibrary.org/obo/UBERON_0001174` -#### Removed -- [common bile duct](http://purl.obolibrary.org/obo/UBERON_0001174) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [common bile duct](http://purl.obolibrary.org/obo/UBERON_0001174) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### common carotid artery plus branches `http://purl.obolibrary.org/obo/UBERON_0001530` -#### Removed -- [common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001530) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001530) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### common hepatic artery `http://purl.obolibrary.org/obo/UBERON_0005436` -#### Removed -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common hepatic artery](http://purl.obolibrary.org/obo/UBERON_0005436) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### common hepatic duct `http://purl.obolibrary.org/obo/UBERON_0001175` -#### Removed -- [common hepatic duct](http://purl.obolibrary.org/obo/UBERON_0001175) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [common hepatic duct](http://purl.obolibrary.org/obo/UBERON_0001175) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### common iliac artery `http://purl.obolibrary.org/obo/UBERON_0001191` -#### Removed -- [common iliac artery](http://purl.obolibrary.org/obo/UBERON_0001191) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Iliac_artery_bifurcation_and_aorta.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [common iliac artery](http://purl.obolibrary.org/obo/UBERON_0001191) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Iliac_artery_bifurcation_and_aorta.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### common iliac vein `http://purl.obolibrary.org/obo/UBERON_0001139` -#### Removed -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [common iliac vein](http://purl.obolibrary.org/obo/UBERON_0001139) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### compact bone tissue `http://purl.obolibrary.org/obo/UBERON_0001439` -#### Removed -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" - -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" - -#### Added -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### compound eye `http://purl.obolibrary.org/obo/UBERON_0000018` - -#### Added -- [compound eye](http://purl.obolibrary.org/obo/UBERON_0000018) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002421" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### compound organ component `http://purl.obolibrary.org/obo/UBERON_0000471` -#### Removed -- [compound organ component](http://purl.obolibrary.org/obo/UBERON_0000471) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "compound organ components" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001489" - -#### Added -- [compound organ component](http://purl.obolibrary.org/obo/UBERON_0000471) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "compound organ components" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001489" - - -### conjunctiva `http://purl.obolibrary.org/obo/UBERON_0001811` -#### Removed -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "conjunctivas" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000182" - -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "conjunctivae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000182" - -#### Added -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "conjunctivae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000182" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "conjunctivas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000182" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### conus arteriosus `http://purl.obolibrary.org/obo/UBERON_0003983` -#### Removed -- [conus arteriosus](http://purl.obolibrary.org/obo/UBERON_0003983) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [conus arteriosus](http://purl.obolibrary.org/obo/UBERON_0003983) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cornea `http://purl.obolibrary.org/obo/UBERON_0000964` -#### Removed -- [cornea](http://purl.obolibrary.org/obo/UBERON_0000964) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cornea](http://purl.obolibrary.org/obo/UBERON_0000964) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "corneas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000640" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cornea](http://purl.obolibrary.org/obo/UBERON_0000964) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cornea](http://purl.obolibrary.org/obo/UBERON_0000964) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "corneas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000640" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### corneal endothelium `http://purl.obolibrary.org/obo/UBERON_0001985` -#### Removed -- [corneal endothelium](http://purl.obolibrary.org/obo/UBERON_0001985) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corneal endothelium](http://purl.obolibrary.org/obo/UBERON_0001985) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### corneal epithelium `http://purl.obolibrary.org/obo/UBERON_0001772` -#### Removed -- [corneal epithelium](http://purl.obolibrary.org/obo/UBERON_0001772) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corneal epithelium](http://purl.obolibrary.org/obo/UBERON_0001772) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### corneo-scleral junction `http://purl.obolibrary.org/obo/UBERON_0006761` -#### Removed -- [corneo-scleral junction](http://purl.obolibrary.org/obo/UBERON_0006761) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Limbus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corneo-scleral junction](http://purl.obolibrary.org/obo/UBERON_0006761) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Limbus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### coronary artery `http://purl.obolibrary.org/obo/UBERON_0001621` -#### Removed -- [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray492.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### corpus luteum `http://purl.obolibrary.org/obo/UBERON_0002512` -#### Removed -- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "corpora lutea" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/57/Folliclesinovary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/57/Folliclesinovary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [corpus luteum](http://purl.obolibrary.org/obo/UBERON_0002512) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "corpora lutea" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### corpus striatum `http://purl.obolibrary.org/obo/UBERON_0000369` -#### Removed -- [corpus striatum](http://purl.obolibrary.org/obo/UBERON_0000369) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray656.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corpus striatum](http://purl.obolibrary.org/obo/UBERON_0000369) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray656.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cortex of kidney `http://purl.obolibrary.org/obo/UBERON_0001225` -#### Removed -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb" - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb" - -#### Added -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cortex of lymph node `http://purl.obolibrary.org/obo/UBERON_0002006` -#### Removed -- [cortex of lymph node](http://purl.obolibrary.org/obo/UBERON_0002006) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cortex of lymph node](http://purl.obolibrary.org/obo/UBERON_0002006) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cortical intermediate zone `http://purl.obolibrary.org/obo/UBERON_0004040` -#### Removed -- [cortical intermediate zone](http://purl.obolibrary.org/obo/UBERON_0004040) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IZ" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - -#### Added -- [cortical intermediate zone](http://purl.obolibrary.org/obo/UBERON_0004040) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IZ" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### cortical layer II `http://purl.obolibrary.org/obo/UBERON_0005391` -#### Removed -- [cortical layer II](http://purl.obolibrary.org/obo/UBERON_0005391) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "EGL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [cortical layer II](http://purl.obolibrary.org/obo/UBERON_0005391) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "EGL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### cortical plate `http://purl.obolibrary.org/obo/UBERON_0005343` -#### Removed -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CxP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CP" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "CxP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - - -### cortical subplate `http://purl.obolibrary.org/obo/UBERON_0004035` -#### Removed -- [cortical subplate](http://purl.obolibrary.org/obo/UBERON_0004035) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - -#### Added -- [cortical subplate](http://purl.obolibrary.org/obo/UBERON_0004035) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SP" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BRAINSPAN:BRAINSPAN" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### corticospinal tract `http://purl.obolibrary.org/obo/UBERON_0002707` -#### Removed -- [corticospinal tract](http://purl.obolibrary.org/obo/UBERON_0002707) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ac/Gray684.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [corticospinal tract](http://purl.obolibrary.org/obo/UBERON_0002707) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ac/Gray684.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [corticospinal tract](http://purl.obolibrary.org/obo/UBERON_0002707) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006132" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### corticotropin receptor activity `http://purl.obolibrary.org/obo/GO_0004978` -#### Removed -- [corticotropin receptor activity](http://purl.obolibrary.org/obo/GO_0004978) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3892](http://purl.obolibrary.org/obo/CHEBI_3892)) - -- [corticotropin receptor activity](http://purl.obolibrary.org/obo/GO_0004978) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3892](http://purl.obolibrary.org/obo/CHEBI_3892) - -#### Added -- [corticotropin receptor activity](http://purl.obolibrary.org/obo/GO_0004978) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3892](http://purl.obolibrary.org/obo/CHEBI_3892)) - -- [corticotropin receptor activity](http://purl.obolibrary.org/obo/GO_0004978) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3892](http://purl.obolibrary.org/obo/CHEBI_3892) - - -### costo-cervical trunk `http://purl.obolibrary.org/obo/UBERON_0004688` -#### Removed -- [costo-cervical trunk](http://purl.obolibrary.org/obo/UBERON_0004688) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Costocervical_trunk_with_branches.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [costo-cervical trunk](http://purl.obolibrary.org/obo/UBERON_0004688) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Costocervical_trunk_with_branches.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cranial blood vasculature `http://purl.obolibrary.org/obo/UBERON_0011362` -#### Removed -- [cranial blood vasculature](http://purl.obolibrary.org/obo/UBERON_0011362) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial blood vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005297" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cranial blood vasculature](http://purl.obolibrary.org/obo/UBERON_0011362) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial blood vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005297" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cranial cartilage `http://purl.obolibrary.org/obo/UBERON_0003933` -#### Removed -- [cranial cartilage](http://purl.obolibrary.org/obo/UBERON_0003933) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial cartilages" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001458" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cranial cartilage](http://purl.obolibrary.org/obo/UBERON_0003933) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial cartilages" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001458" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cranial cavity `http://purl.obolibrary.org/obo/UBERON_0013411` -#### Removed -- [cranial cavity](http://purl.obolibrary.org/obo/UBERON_0013411) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cranial cavity](http://purl.obolibrary.org/obo/UBERON_0013411) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cranial ganglion `http://purl.obolibrary.org/obo/UBERON_0001714` - -#### Added -- [cranial ganglion](http://purl.obolibrary.org/obo/UBERON_0001714) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [cranial ganglion](http://purl.obolibrary.org/obo/UBERON_0001714) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### cranial lymph vasculature `http://purl.obolibrary.org/obo/UBERON_0011363` -#### Removed -- [cranial lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0011363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial lymph vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005298" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cranial lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0011363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial lymph vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005298" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cranial nerve `http://purl.obolibrary.org/obo/UBERON_0001785` -#### Removed -- [cranial nerve](http://purl.obolibrary.org/obo/UBERON_0001785) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/84/Brain_human_normal_inferior_view_with_labels_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cranial nerve](http://purl.obolibrary.org/obo/UBERON_0001785) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/18/Brain_human_normal_inferior_view_with_labels_en-2.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cranial nerve](http://purl.obolibrary.org/obo/UBERON_0001785) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/18/Brain_human_normal_inferior_view_with_labels_en-2.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cranial nerve](http://purl.obolibrary.org/obo/UBERON_0001785) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/84/Brain_human_normal_inferior_view_with_labels_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cranial nerve II `http://purl.obolibrary.org/obo/UBERON_0000941` -#### Removed -- [cranial nerve II](http://purl.obolibrary.org/obo/UBERON_0000941) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "2n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1640" - -#### Added -- [cranial nerve II](http://purl.obolibrary.org/obo/UBERON_0000941) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "2n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1640" - - -### cranial nerve nucleus `http://purl.obolibrary.org/obo/UBERON_0000126` -#### Removed -- [cranial nerve nucleus](http://purl.obolibrary.org/obo/UBERON_0000126) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cranial nerve nucleus](http://purl.obolibrary.org/obo/UBERON_0000126) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cranial neural crest `http://purl.obolibrary.org/obo/UBERON_0003099` -#### Removed -- [cranial neural crest](http://purl.obolibrary.org/obo/UBERON_0003099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CNC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0001001" - -#### Added -- [cranial neural crest](http://purl.obolibrary.org/obo/UBERON_0003099) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CNC" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0001001" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### cranial placode `http://purl.obolibrary.org/obo/UBERON_0002546` -#### Removed -- [cranial placode](http://purl.obolibrary.org/obo/UBERON_0002546) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000305" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [cranial placode](http://purl.obolibrary.org/obo/UBERON_0002546) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "cranial placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000305" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### created by `http://www.geneontology.org/formats/oboInOwl#created_by` - -#### Added -- [created by](http://www.geneontology.org/formats/oboInOwl#created_by) [label](http://www.w3.org/2000/01/rdf-schema#label) "created by" - - -### creation date `http://www.geneontology.org/formats/oboInOwl#creation_date` - -#### Added -- [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) [label](http://www.w3.org/2000/01/rdf-schema#label) "creation date" - - -### crista ampullaris `http://purl.obolibrary.org/obo/UBERON_0004721` -#### Removed -- [crista ampullaris](http://purl.obolibrary.org/obo/UBERON_0004721) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ec/Semicircular_canal_-_ampulla.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [crista ampullaris](http://purl.obolibrary.org/obo/UBERON_0004721) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ec/Semicircular_canal_-_ampulla.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### crypt of Lieberkuhn `http://purl.obolibrary.org/obo/UBERON_0001983` -#### Removed -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "crypts of Lieberkühn" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intestinal crypts" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "Lieberkuhn's glands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "crypts of Lieberkühn" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "Lieberkuhn's glands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [crypt of Lieberkuhn](http://purl.obolibrary.org/obo/UBERON_0001983) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intestinal crypts" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### cystic artery `http://purl.obolibrary.org/obo/UBERON_0039222` -#### Removed -- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cystic duct `http://purl.obolibrary.org/obo/UBERON_0001152` -#### Removed -- [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### cystoblast division `http://purl.obolibrary.org/obo/GO_0007282` -#### Removed -- [cystoblast division](http://purl.obolibrary.org/obo/GO_0007282) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [cystoblast](http://purl.obolibrary.org/obo/CL_0000722)) - -- [cystoblast division](http://purl.obolibrary.org/obo/GO_0007282) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [cystoblast](http://purl.obolibrary.org/obo/CL_0000722) - -#### Added -- [cystoblast division](http://purl.obolibrary.org/obo/GO_0007282) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cystoblast](http://purl.obolibrary.org/obo/CL_0000722)) - -- [cystoblast division](http://purl.obolibrary.org/obo/GO_0007282) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cystoblast](http://purl.obolibrary.org/obo/CL_0000722) - - -### decidua `http://purl.obolibrary.org/obo/UBERON_0002450` -#### Removed -- [decidua](http://purl.obolibrary.org/obo/UBERON_0002450) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [decidua](http://purl.obolibrary.org/obo/UBERON_0002450) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [decidua](http://purl.obolibrary.org/obo/UBERON_0002450) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray33.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [decidua](http://purl.obolibrary.org/obo/UBERON_0002450) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray33.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### deep femoral artery `http://purl.obolibrary.org/obo/UBERON_0001355` -#### Removed -- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [deep femoral artery](http://purl.obolibrary.org/obo/UBERON_0001355) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### defense response to bacterium `http://purl.obolibrary.org/obo/GO_0042742` -#### Removed -- [defense response to bacterium](http://purl.obolibrary.org/obo/GO_0042742) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2)) - -#### Added -- [defense response to bacterium](http://purl.obolibrary.org/obo/GO_0042742) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2)) - - -### defense response to fungus `http://purl.obolibrary.org/obo/GO_0050832` -#### Removed -- [defense response to fungus](http://purl.obolibrary.org/obo/GO_0050832) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751)) - -#### Added -- [defense response to fungus](http://purl.obolibrary.org/obo/GO_0050832) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751)) - - -### defense response to insect `http://purl.obolibrary.org/obo/GO_0002213` -#### Removed -- [defense response to insect](http://purl.obolibrary.org/obo/GO_0002213) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Insecta](http://purl.obolibrary.org/obo/NCBITaxon_50557)) - -- [defense response to insect](http://purl.obolibrary.org/obo/GO_0002213) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [Insecta](http://purl.obolibrary.org/obo/NCBITaxon_50557) - -#### Added -- [defense response to insect](http://purl.obolibrary.org/obo/GO_0002213) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Insecta](http://purl.obolibrary.org/obo/NCBITaxon_50557)) - -- [defense response to insect](http://purl.obolibrary.org/obo/GO_0002213) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Insecta](http://purl.obolibrary.org/obo/NCBITaxon_50557) - - -### defense response to nematode `http://purl.obolibrary.org/obo/GO_0002215` -#### Removed -- [defense response to nematode](http://purl.obolibrary.org/obo/GO_0002215) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231)) - -- [defense response to nematode](http://purl.obolibrary.org/obo/GO_0002215) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) - -#### Added -- [defense response to nematode](http://purl.obolibrary.org/obo/GO_0002215) EquivalentTo [defense response](http://purl.obolibrary.org/obo/GO_0006952) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231)) - -- [defense response to nematode](http://purl.obolibrary.org/obo/GO_0002215) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Nematoda](http://purl.obolibrary.org/obo/NCBITaxon_6231) - - -### deltoid `http://purl.obolibrary.org/obo/UBERON_0001476` -#### Removed -- [deltoid](http://purl.obolibrary.org/obo/UBERON_0001476) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/93/Deltoideus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [deltoid](http://purl.obolibrary.org/obo/UBERON_0001476) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/93/Deltoideus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### deltopectoral crest `http://purl.obolibrary.org/obo/UBERON_0002498` -#### Removed -- [deltopectoral crest](http://purl.obolibrary.org/obo/UBERON_0002498) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a7/HumerusFront.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [deltopectoral crest](http://purl.obolibrary.org/obo/UBERON_0002498) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a7/HumerusFront.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dendritic cell `http://purl.obolibrary.org/obo/CL_0000451` -#### Removed -- [dendritic cell](http://purl.obolibrary.org/obo/CL_0000451) SubClassOf [mononuclear cell](http://purl.obolibrary.org/obo/CL_0000842) - -#### Added -- [dendritic cell](http://purl.obolibrary.org/obo/CL_0000451) SubClassOf [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) - - -### dental epithelium `http://purl.obolibrary.org/obo/UBERON_0003843` -#### Removed -- [dental epithelium](http://purl.obolibrary.org/obo/UBERON_0003843) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dental epithelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005134" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [dental epithelium](http://purl.obolibrary.org/obo/UBERON_0003843) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dental epithelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005134" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dental pulp `http://purl.obolibrary.org/obo/UBERON_0001754` -#### Removed -- [dental pulp](http://purl.obolibrary.org/obo/UBERON_0001754) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dental pulp](http://purl.obolibrary.org/obo/UBERON_0001754) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dentary `http://purl.obolibrary.org/obo/UBERON_0004742` -#### Removed -- [dentary](http://purl.obolibrary.org/obo/UBERON_0004742) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dentaries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000191" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [dentary](http://purl.obolibrary.org/obo/UBERON_0004742) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dentaries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000191" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dentary tooth `http://purl.obolibrary.org/obo/UBERON_0011594` -#### Removed -- [dentary tooth](http://purl.obolibrary.org/obo/UBERON_0011594) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mandibular teeth" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000641" - -#### Added -- [dentary tooth](http://purl.obolibrary.org/obo/UBERON_0011594) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mandibular teeth" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000641" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dentate gyrus of hippocampal formation `http://purl.obolibrary.org/obo/UBERON_0001885` -#### Removed -- [dentate gyrus of hippocampal formation](http://purl.obolibrary.org/obo/UBERON_0001885) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ab/HippocampalRegions.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dentate gyrus of hippocampal formation](http://purl.obolibrary.org/obo/UBERON_0001885) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ab/HippocampalRegions.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### depicted_by `http://xmlns.com/foaf/0.1/depicted_by` -#### Removed -- AnnotationProperty: [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) - - - -### depiction `http://xmlns.com/foaf/0.1/depiction` - -#### Added -- [depiction](http://xmlns.com/foaf/0.1/depiction) [id](http://www.geneontology.org/formats/oboInOwl#id) "depiction" - -- [depiction](http://xmlns.com/foaf/0.1/depiction) [shorthand](http://www.geneontology.org/formats/oboInOwl#shorthand) "depiction" - -- [depiction](http://xmlns.com/foaf/0.1/depiction) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" - -- [depiction](http://xmlns.com/foaf/0.1/depiction) [is_metadata_tag](http://www.geneontology.org/formats/oboInOwl#is_metadata_tag) true - -- [depiction](http://xmlns.com/foaf/0.1/depiction) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://xmlns.com/foaf/0.1/depiction" - -- [depiction](http://xmlns.com/foaf/0.1/depiction) [label](http://www.w3.org/2000/01/rdf-schema#label) "depiction" - - -### dermal bone `http://purl.obolibrary.org/obo/UBERON_0008907` -#### Removed -- [dermal bone](http://purl.obolibrary.org/obo/UBERON_0008907) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dermal bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001590" - -#### Added -- [dermal bone](http://purl.obolibrary.org/obo/UBERON_0008907) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dermal bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001590" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dermal papilla `http://purl.obolibrary.org/obo/UBERON_0000412` -#### Removed -- [dermal papilla](http://purl.obolibrary.org/obo/UBERON_0000412) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/34/Skin.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dermal papilla](http://purl.obolibrary.org/obo/UBERON_0000412) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dermal papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [dermal papilla](http://purl.obolibrary.org/obo/UBERON_0000412) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/34/Skin.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dermal papilla](http://purl.obolibrary.org/obo/UBERON_0000412) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dermal papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dermatome `http://purl.obolibrary.org/obo/UBERON_0004016` -#### Removed -- [dermatome](http://purl.obolibrary.org/obo/UBERON_0004016) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dermatome](http://purl.obolibrary.org/obo/UBERON_0004016) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006248" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [dermatome](http://purl.obolibrary.org/obo/UBERON_0004016) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dermis `http://purl.obolibrary.org/obo/UBERON_0002067` -#### Removed -- [dermis](http://purl.obolibrary.org/obo/UBERON_0002067) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dermis](http://purl.obolibrary.org/obo/UBERON_0002067) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dermomyotome `http://purl.obolibrary.org/obo/UBERON_0004290` -#### Removed -- [dermomyotome](http://purl.obolibrary.org/obo/UBERON_0004290) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dermomyotomes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000676" - -#### Added -- [dermomyotome](http://purl.obolibrary.org/obo/UBERON_0004290) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dermomyotomes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000676" - - -### descending aorta `http://purl.obolibrary.org/obo/UBERON_0001514` -#### Removed -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending aorta](http://purl.obolibrary.org/obo/UBERON_0001514) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### descending colon `http://purl.obolibrary.org/obo/UBERON_0001158` -#### Removed -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray1223.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -#### Added -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray1223.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### descending limb of loop of Henle `http://purl.obolibrary.org/obo/UBERON_0001289` -#### Removed -- [descending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001289) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [descending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001289) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### descending thin limb `http://purl.obolibrary.org/obo/UBERON_0005096` -#### Removed -- [descending thin limb](http://purl.obolibrary.org/obo/UBERON_0005096) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [descending thin limb](http://purl.obolibrary.org/obo/UBERON_0005096) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### detoxification of inorganic compound `http://purl.obolibrary.org/obo/GO_0061687` -#### Removed -- [detoxification of inorganic compound](http://purl.obolibrary.org/obo/GO_0061687) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835)) - -- [detoxification of inorganic compound](http://purl.obolibrary.org/obo/GO_0061687) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835) - -#### Added -- [detoxification of inorganic compound](http://purl.obolibrary.org/obo/GO_0061687) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835)) - -- [detoxification of inorganic compound](http://purl.obolibrary.org/obo/GO_0061687) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835) - - -### detoxification of iron ion `http://purl.obolibrary.org/obo/GO_1990461` -#### Removed -- [detoxification of iron ion](http://purl.obolibrary.org/obo/GO_1990461) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [detoxification of iron ion](http://purl.obolibrary.org/obo/GO_1990461) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - -#### Added -- [detoxification of iron ion](http://purl.obolibrary.org/obo/GO_1990461) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [detoxification of iron ion](http://purl.obolibrary.org/obo/GO_1990461) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - - -### detoxification of nitrogen compound `http://purl.obolibrary.org/obo/GO_0051410` -#### Removed -- [detoxification of nitrogen compound](http://purl.obolibrary.org/obo/GO_0051410) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - -- [detoxification of nitrogen compound](http://purl.obolibrary.org/obo/GO_0051410) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143) - -#### Added -- [detoxification of nitrogen compound](http://purl.obolibrary.org/obo/GO_0051410) EquivalentTo [detoxification](http://purl.obolibrary.org/obo/GO_0098754) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - -- [detoxification of nitrogen compound](http://purl.obolibrary.org/obo/GO_0051410) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143) - - -### diaphysis `http://purl.obolibrary.org/obo/UBERON_0004769` -#### Removed -- [diaphysis](http://purl.obolibrary.org/obo/UBERON_0004769) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [diaphysis](http://purl.obolibrary.org/obo/UBERON_0004769) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### diaphysis of femur `http://purl.obolibrary.org/obo/UBERON_0006862` -#### Removed -- [diaphysis of femur](http://purl.obolibrary.org/obo/UBERON_0006862) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray244.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [diaphysis of femur](http://purl.obolibrary.org/obo/UBERON_0006862) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray244.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### diencephalic white matter `http://purl.obolibrary.org/obo/UBERON_0003931` -#### Removed -- [diencephalic white matter](http://purl.obolibrary.org/obo/UBERON_0003931) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "diencephalic tracts and commissures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000338" - -#### Added -- [diencephalic white matter](http://purl.obolibrary.org/obo/UBERON_0003931) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "diencephalic tracts and commissures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000338" - - -### diencephalon `http://purl.obolibrary.org/obo/UBERON_0001894` -#### Removed -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DiE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1503" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DiE" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1503" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### digestive system `http://purl.obolibrary.org/obo/UBERON_0001007` - -#### Added -- [digestive system](http://purl.obolibrary.org/obo/UBERON_0001007) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [digestive system](http://purl.obolibrary.org/obo/UBERON_0001007) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### digestive tract `http://purl.obolibrary.org/obo/UBERON_0001555` - -#### Added -- [digestive tract](http://purl.obolibrary.org/obo/UBERON_0001555) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [digestive tract](http://purl.obolibrary.org/obo/UBERON_0001555) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### digestive tract epithelium `http://purl.obolibrary.org/obo/UBERON_0003929` - -#### Added -- [digestive tract epithelium](http://purl.obolibrary.org/obo/UBERON_0003929) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00047166" - - -### dilatator pupillae `http://purl.obolibrary.org/obo/UBERON_0001608` -#### Removed -- [dilatator pupillae](http://purl.obolibrary.org/obo/UBERON_0001608) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dilatator pupillae](http://purl.obolibrary.org/obo/UBERON_0001608) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### distal convoluted tubule `http://purl.obolibrary.org/obo/UBERON_0001292` -#### Removed -- [distal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001292) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [distal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001292) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### distal phalanx `http://purl.obolibrary.org/obo/UBERON_0004300` -#### Removed -- [distal phalanx](http://purl.obolibrary.org/obo/UBERON_0004300) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Scheme_human_hand_bones-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [distal phalanx](http://purl.obolibrary.org/obo/UBERON_0004300) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Scheme_human_hand_bones-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dopamine binding `http://purl.obolibrary.org/obo/GO_0035240` -#### Removed -- [dopamine binding](http://purl.obolibrary.org/obo/GO_0035240) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - -- [dopamine binding](http://purl.obolibrary.org/obo/GO_0035240) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905) - -#### Added -- [dopamine binding](http://purl.obolibrary.org/obo/GO_0035240) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - -- [dopamine binding](http://purl.obolibrary.org/obo/GO_0035240) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905) - - -### dorsal aorta `http://purl.obolibrary.org/obo/UBERON_0005805` -#### Removed -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray459.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal aortæ" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Dorsal_aorta" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal aortae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Dorsal_aorta" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray459.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal aortæ" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Dorsal_aorta" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal aortae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Dorsal_aorta" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dorsal cochlear nucleus `http://purl.obolibrary.org/obo/UBERON_0002829` -#### Removed -- [dorsal cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002829) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002829) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2569" - -#### Added -- [dorsal cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002829) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002829) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2569" - - -### dorsal horn of spinal cord `http://purl.obolibrary.org/obo/UBERON_0002256` -#### Removed -- [dorsal horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002256) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal cord dorsal horns" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [dorsal horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002256) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsal horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002256) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002256) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal cord dorsal horns" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dorsal lateral geniculate nucleus `http://purl.obolibrary.org/obo/UBERON_0002479` -#### Removed -- [dorsal lateral geniculate nucleus](http://purl.obolibrary.org/obo/UBERON_0002479) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DLG" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1595" - -#### Added -- [dorsal lateral geniculate nucleus](http://purl.obolibrary.org/obo/UBERON_0002479) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DLG" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1595" - - -### dorsal mesentery `http://purl.obolibrary.org/obo/UBERON_0002296` -#### Removed -- [dorsal mesentery](http://purl.obolibrary.org/obo/UBERON_0002296) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsal mesentery](http://purl.obolibrary.org/obo/UBERON_0002296) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dorsal pancreatic bud `http://purl.obolibrary.org/obo/UBERON_0003923` -#### Removed -- [dorsal pancreatic bud](http://purl.obolibrary.org/obo/UBERON_0003923) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsal pancreatic bud](http://purl.obolibrary.org/obo/UBERON_0003923) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dorsal plus ventral thalamus `http://purl.obolibrary.org/obo/UBERON_0001897` -#### Removed -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Brain_chrischan_thalamus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thalami" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000657" - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Th" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:954" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Th" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:954" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Brain_chrischan_thalamus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [dorsal plus ventral thalamus](http://purl.obolibrary.org/obo/UBERON_0001897) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thalami" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000657" - - -### dorsal root ganglion `http://purl.obolibrary.org/obo/UBERON_0000044` -#### Removed -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/71/DRG_Chicken_e7.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal root ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "DRG" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/71/DRG_Chicken_e7.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dorsal root ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "DRG" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### dorsal root of spinal cord `http://purl.obolibrary.org/obo/UBERON_0002261` -#### Removed -- [dorsal root of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002261) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsal root of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002261) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dorsal thalamus `http://purl.obolibrary.org/obo/UBERON_0004703` - -#### Added -- [dorsal thalamus](http://purl.obolibrary.org/obo/UBERON_0004703) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [dorsal thalamus](http://purl.obolibrary.org/obo/UBERON_0004703) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### dorsal venous arch `http://purl.obolibrary.org/obo/UBERON_0008783` -#### Removed -- [dorsal venous arch](http://purl.obolibrary.org/obo/UBERON_0008783) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Gray581.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsal venous arch](http://purl.obolibrary.org/obo/UBERON_0008783) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Gray581.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dorsolateral placode `http://purl.obolibrary.org/obo/UBERON_0003067` -#### Removed -- [dorsolateral placode](http://purl.obolibrary.org/obo/UBERON_0003067) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dorsolateral placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001310" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [dorsolateral placode](http://purl.obolibrary.org/obo/UBERON_0003067) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "dorsolateral placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001310" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### dorsum `http://purl.obolibrary.org/obo/UBERON_0001137` -#### Removed -- [dorsum](http://purl.obolibrary.org/obo/UBERON_0001137) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/432px-Gray-back.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dorsum](http://purl.obolibrary.org/obo/UBERON_0001137) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/432px-Gray-back.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### duct `http://purl.obolibrary.org/obo/UBERON_0000058` -#### Removed -- [duct](http://purl.obolibrary.org/obo/UBERON_0000058) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ducts" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004000" - -#### Added -- [duct](http://purl.obolibrary.org/obo/UBERON_0000058) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004000" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### duct of seminal vesicle `http://purl.obolibrary.org/obo/UBERON_0005903` -#### Removed -- [duct of seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0005903) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1160.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [duct of seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0005903) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1160.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### duodenal papilla `http://purl.obolibrary.org/obo/UBERON_0004914` -#### Removed -- [duodenal papilla](http://purl.obolibrary.org/obo/UBERON_0004914) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb" - -- [duodenal papilla](http://purl.obolibrary.org/obo/UBERON_0004914) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [duodenal papilla](http://purl.obolibrary.org/obo/UBERON_0004914) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [duodenal papilla](http://purl.obolibrary.org/obo/UBERON_0004914) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### duodenum `http://purl.obolibrary.org/obo/UBERON_0002114` -#### Removed -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Tractus_intestinalis_duodenum.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb" - -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb" - -#### Added -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Tractus_intestinalis_duodenum.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### dura mater `http://purl.obolibrary.org/obo/UBERON_0002363` -#### Removed -- [dura mater](http://purl.obolibrary.org/obo/UBERON_0002363) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Meninges-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [dura mater](http://purl.obolibrary.org/obo/UBERON_0002363) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Meninges-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ear `http://purl.obolibrary.org/obo/UBERON_0001690` -#### Removed -- [ear](http://purl.obolibrary.org/obo/UBERON_0001690) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Ear.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ear](http://purl.obolibrary.org/obo/UBERON_0001690) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Ear.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ear vesicle `http://purl.obolibrary.org/obo/UBERON_0003051` -#### Removed -- [ear vesicle](http://purl.obolibrary.org/obo/UBERON_0003051) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray40.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ear vesicle](http://purl.obolibrary.org/obo/UBERON_0003051) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray40.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ectoderm `http://purl.obolibrary.org/obo/UBERON_0000924` -#### Removed -- [ectoderm](http://purl.obolibrary.org/obo/UBERON_0000924) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ectoderm](http://purl.obolibrary.org/obo/UBERON_0000924) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### editor_note `http://www.geneontology.org/formats/oboInOwl#editor_note` -#### Removed -- AnnotationProperty: [editor_note](http://www.geneontology.org/formats/oboInOwl#editor_note) - - - -### effector memory CD45RA-positive, alpha-beta T cell, terminally differentiated `http://purl.obolibrary.org/obo/CL_4030002` -#### Removed -- [effector memory CD45RA-positive, alpha-beta T cell, terminally differentiated](http://purl.obolibrary.org/obo/CL_4030002) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### efferent duct `http://purl.obolibrary.org/obo/UBERON_0006946` -#### Removed -- [efferent duct](http://purl.obolibrary.org/obo/UBERON_0006946) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [efferent duct](http://purl.obolibrary.org/obo/UBERON_0006946) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### efferent lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0010397` -#### Removed -- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -#### Added -- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### egg activation `http://purl.obolibrary.org/obo/GO_0007343` -#### Removed -- [egg activation](http://purl.obolibrary.org/obo/GO_0007343) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [egg cell](http://purl.obolibrary.org/obo/CL_0000025)) - -- [egg activation](http://purl.obolibrary.org/obo/GO_0007343) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [egg cell](http://purl.obolibrary.org/obo/CL_0000025) - -#### Added -- [egg activation](http://purl.obolibrary.org/obo/GO_0007343) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [egg cell](http://purl.obolibrary.org/obo/CL_0000025)) - -- [egg activation](http://purl.obolibrary.org/obo/GO_0007343) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [egg cell](http://purl.obolibrary.org/obo/CL_0000025) - - -### egg cell `http://purl.obolibrary.org/obo/CL_0000025` -#### Removed -- [egg cell](http://purl.obolibrary.org/obo/CL_0000025) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000388" - - - -### ejaculatory duct `http://purl.obolibrary.org/obo/UBERON_0000999` -#### Removed -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ductus ejaculatorii" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001580" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ejaculatory duct](http://purl.obolibrary.org/obo/UBERON_0000999) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ductus ejaculatorii" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001580" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### elastic cartilage tissue `http://purl.obolibrary.org/obo/UBERON_0001996` -#### Removed -- [elastic cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001996) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray904.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [elastic cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001996) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray904.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### elastic tissue `http://purl.obolibrary.org/obo/UBERON_0002521` -#### Removed -- [elastic tissue](http://purl.obolibrary.org/obo/UBERON_0002521) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray377.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [elastic tissue](http://purl.obolibrary.org/obo/UBERON_0002521) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray377.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### elbow `http://purl.obolibrary.org/obo/UBERON_0001461` -#### Removed -- [elbow](http://purl.obolibrary.org/obo/UBERON_0001461) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/5c/Elbow_coude.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [elbow](http://purl.obolibrary.org/obo/UBERON_0001461) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/5c/Elbow_coude.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### embryo `http://purl.obolibrary.org/obo/UBERON_0000922` -#### Removed -- [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2d/Wrinkledfrog_embryos.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2d/Wrinkledfrog_embryos.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000646" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### embryonic cell (metazoa) `http://purl.obolibrary.org/obo/CL_0002321` -#### Removed -- [embryonic cell (metazoa)](http://purl.obolibrary.org/obo/CL_0002321) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:82841" - - - -### embryonic structure `http://purl.obolibrary.org/obo/UBERON_0002050` -#### Removed -- [embryonic structure](http://purl.obolibrary.org/obo/UBERON_0002050) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic structures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001105" - -#### Added -- [embryonic structure](http://purl.obolibrary.org/obo/UBERON_0002050) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001105" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### enamel `http://purl.obolibrary.org/obo/UBERON_0001752` -#### Removed -- [enamel](http://purl.obolibrary.org/obo/UBERON_0001752) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Enamelorgan11-17-05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [enamel](http://purl.obolibrary.org/obo/UBERON_0001752) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Enamelorgan11-17-05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endocardial cushion `http://purl.obolibrary.org/obo/UBERON_0002062` -#### Removed -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endocardial cushions" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endocardial cushions" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endocardium `http://purl.obolibrary.org/obo/UBERON_0002165` -#### Removed -- [endocardium](http://purl.obolibrary.org/obo/UBERON_0002165) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endocardium](http://purl.obolibrary.org/obo/UBERON_0002165) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endochondral bone `http://purl.obolibrary.org/obo/UBERON_0002513` -#### Removed -- [endochondral bone](http://purl.obolibrary.org/obo/UBERON_0002513) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [endochondral bone](http://purl.obolibrary.org/obo/UBERON_0002513) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endochondral bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001591" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [endochondral bone](http://purl.obolibrary.org/obo/UBERON_0002513) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "endochondral bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001591" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [endochondral bone](http://purl.obolibrary.org/obo/UBERON_0002513) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endocrine gland `http://purl.obolibrary.org/obo/UBERON_0002368` -#### Removed -- [endocrine gland](http://purl.obolibrary.org/obo/UBERON_0002368) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/da/Illu_endocrine_system.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endocrine gland](http://purl.obolibrary.org/obo/UBERON_0002368) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/da/Illu_endocrine_system.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endoderm `http://purl.obolibrary.org/obo/UBERON_0000925` -#### Removed -- [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endodermal-mesodermal cell signaling `http://purl.obolibrary.org/obo/GO_0003133` -#### Removed -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesoderm](http://purl.obolibrary.org/obo/UBERON_0000926)) - -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesoderm](http://purl.obolibrary.org/obo/UBERON_0000926) - -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [endoderm](http://purl.obolibrary.org/obo/UBERON_0000925) - -#### Added -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesodermal cell](http://purl.obolibrary.org/obo/CL_0000222)) - -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223) - -- [endodermal-mesodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003133) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesodermal cell](http://purl.obolibrary.org/obo/CL_0000222) - - -### endometrial gland `http://purl.obolibrary.org/obo/UBERON_0002451` -#### Removed -- [endometrial gland](http://purl.obolibrary.org/obo/UBERON_0002451) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray1169.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endometrial gland](http://purl.obolibrary.org/obo/UBERON_0002451) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray1169.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endometrium `http://purl.obolibrary.org/obo/UBERON_0001295` -#### Removed -- [endometrium](http://purl.obolibrary.org/obo/UBERON_0001295) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endometrium](http://purl.obolibrary.org/obo/UBERON_0001295) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endosteum `http://purl.obolibrary.org/obo/UBERON_0009859` -#### Removed -- [endosteum](http://purl.obolibrary.org/obo/UBERON_0009859) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [endosteum](http://purl.obolibrary.org/obo/UBERON_0009859) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### endothelial cell activation `http://purl.obolibrary.org/obo/GO_0042118` -#### Removed -- [endothelial cell activation](http://purl.obolibrary.org/obo/GO_0042118) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115)) - -- [endothelial cell activation](http://purl.obolibrary.org/obo/GO_0042118) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115) - -#### Added -- [endothelial cell activation](http://purl.obolibrary.org/obo/GO_0042118) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115)) - -- [endothelial cell activation](http://purl.obolibrary.org/obo/GO_0042118) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [endothelial cell](http://purl.obolibrary.org/obo/CL_0000115) - - -### enteric plexus `http://purl.obolibrary.org/obo/UBERON_0000429` - -#### Added -- [enteric plexus](http://purl.obolibrary.org/obo/UBERON_0000429) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [enteric plexus](http://purl.obolibrary.org/obo/UBERON_0000429) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### eosinophil activation `http://purl.obolibrary.org/obo/GO_0043307` -#### Removed -- [eosinophil activation](http://purl.obolibrary.org/obo/GO_0043307) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [eosinophil](http://purl.obolibrary.org/obo/CL_0000771)) - -- [eosinophil activation](http://purl.obolibrary.org/obo/GO_0043307) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [eosinophil](http://purl.obolibrary.org/obo/CL_0000771) - -#### Added -- [eosinophil activation](http://purl.obolibrary.org/obo/GO_0043307) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [eosinophil](http://purl.obolibrary.org/obo/CL_0000771)) - -- [eosinophil activation](http://purl.obolibrary.org/obo/GO_0043307) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [eosinophil](http://purl.obolibrary.org/obo/CL_0000771) - - -### ependyma `http://purl.obolibrary.org/obo/UBERON_0004670` -#### Removed -- [ependyma](http://purl.obolibrary.org/obo/UBERON_0004670) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray667.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ependyma](http://purl.obolibrary.org/obo/UBERON_0004670) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray667.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### epiblast (generic) `http://purl.obolibrary.org/obo/UBERON_0002532` -#### Removed -- [epiblast (generic)](http://purl.obolibrary.org/obo/UBERON_0002532) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epiblast (generic)](http://purl.obolibrary.org/obo/UBERON_0002532) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### epibranchial ganglion `http://purl.obolibrary.org/obo/UBERON_0009127` -#### Removed -- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epibranchial ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001555" - -#### Added -- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epibranchial ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001555" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006250" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### epibranchial placode `http://purl.obolibrary.org/obo/UBERON_0003078` -#### Removed -- [epibranchial placode](http://purl.obolibrary.org/obo/UBERON_0003078) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epibranchial placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001294" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [epibranchial placode](http://purl.obolibrary.org/obo/UBERON_0003078) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epibranchial placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001294" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### epicardial adipocyte `http://purl.obolibrary.org/obo/CL_1000309` -#### Removed -- [epicardial adipocyte](http://purl.obolibrary.org/obo/CL_1000309) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of the epicardial fat." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -#### Added -- [epicardial adipocyte](http://purl.obolibrary.org/obo/CL_1000309) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of the epicardial fat." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - -### epicardium `http://purl.obolibrary.org/obo/UBERON_0002348` -#### Removed -- [epicardium](http://purl.obolibrary.org/obo/UBERON_0002348) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer." - -#### Added -- [epicardium](http://purl.obolibrary.org/obo/UBERON_0002348) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer." - - -### epicranial aponeurosis `http://purl.obolibrary.org/obo/UBERON_0006661` -#### Removed -- [epicranial aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006661) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epicranial aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006661) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### epidermal cell division `http://purl.obolibrary.org/obo/GO_0010481` -#### Removed -- [epidermal cell division](http://purl.obolibrary.org/obo/GO_0010481) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [epidermal cell](http://purl.obolibrary.org/obo/CL_0000362)) - -- [epidermal cell division](http://purl.obolibrary.org/obo/GO_0010481) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [epidermal cell](http://purl.obolibrary.org/obo/CL_0000362) - -#### Added -- [epidermal cell division](http://purl.obolibrary.org/obo/GO_0010481) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [epidermal cell](http://purl.obolibrary.org/obo/CL_0000362)) - -- [epidermal cell division](http://purl.obolibrary.org/obo/GO_0010481) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [epidermal cell](http://purl.obolibrary.org/obo/CL_0000362) - - -### epididymis `http://purl.obolibrary.org/obo/UBERON_0001301` -#### Removed -- [epididymis](http://purl.obolibrary.org/obo/UBERON_0001301) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_testis_surface.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epididymis](http://purl.obolibrary.org/obo/UBERON_0001301) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_testis_surface.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### epimysium `http://purl.obolibrary.org/obo/UBERON_0011899` -#### Removed -- [epimysium](http://purl.obolibrary.org/obo/UBERON_0011899) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "epimysia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Epimysium" - -#### Added -- [epimysium](http://purl.obolibrary.org/obo/UBERON_0011899) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "epimysia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Epimysium" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### epinephrine binding `http://purl.obolibrary.org/obo/GO_0051379` -#### Removed -- [epinephrine binding](http://purl.obolibrary.org/obo/GO_0051379) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - -- [epinephrine binding](http://purl.obolibrary.org/obo/GO_0051379) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568) - -#### Added -- [epinephrine binding](http://purl.obolibrary.org/obo/GO_0051379) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - -- [epinephrine binding](http://purl.obolibrary.org/obo/GO_0051379) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568) - - -### epineurium `http://purl.obolibrary.org/obo/UBERON_0000124` -#### Removed -- [epineurium](http://purl.obolibrary.org/obo/UBERON_0000124) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epineurium](http://purl.obolibrary.org/obo/UBERON_0000124) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### epiphysis `http://purl.obolibrary.org/obo/UBERON_0001437` -#### Removed -- [epiphysis](http://purl.obolibrary.org/obo/UBERON_0001437) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [epiphysis](http://purl.obolibrary.org/obo/UBERON_0001437) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epiphyses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [epiphysis](http://purl.obolibrary.org/obo/UBERON_0001437) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [epiphysis](http://purl.obolibrary.org/obo/UBERON_0001437) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epiphyses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### epithalamus `http://purl.obolibrary.org/obo/UBERON_0001899` -#### Removed -- [epithalamus](http://purl.obolibrary.org/obo/UBERON_0001899) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ETh" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1710" - -- [epithalamus](http://purl.obolibrary.org/obo/UBERON_0001899) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Epithalamus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epithalamus](http://purl.obolibrary.org/obo/UBERON_0001899) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Epithalamus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [epithalamus](http://purl.obolibrary.org/obo/UBERON_0001899) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ETh" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1710" - - -### epithelial cell of distal tubule `http://purl.obolibrary.org/obo/CL_0002305` -#### Removed -- [epithelial cell of distal tubule](http://purl.obolibrary.org/obo/CL_0002305) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:62125" - -#### Added -- [epithelial cell of distal tubule](http://purl.obolibrary.org/obo/CL_0002305) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### epithelial cell of early distal convoluted tubule `http://purl.obolibrary.org/obo/CL_4030016` -#### Removed -- [epithelial cell of early distal convoluted tubule](http://purl.obolibrary.org/obo/CL_4030016) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### epithelial cell of glomerular capsule `http://purl.obolibrary.org/obo/CL_1000450` - -#### Added -- [epithelial cell of glomerular capsule](http://purl.obolibrary.org/obo/CL_1000450) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### epithelial cell of lacrimal duct `http://purl.obolibrary.org/obo/CL_1000435` -#### Removed -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An epithelial cell that is part of the lacrimal duct." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelial cell of lacrimal duct" - -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) EquivalentTo [non-branched duct epithelial cell](http://purl.obolibrary.org/obo/CL_0000072) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lacrimal drainage system](http://purl.obolibrary.org/obo/UBERON_0001850)) - -#### Added -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An epithelial cell that is part of the lacrimal drainage system." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:22594785" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "epithelial cell of lacrimal duct" - -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelial cell of lacrimal drainage system" - -- [epithelial cell of lacrimal duct](http://purl.obolibrary.org/obo/CL_1000435) EquivalentTo [duct epithelial cell](http://purl.obolibrary.org/obo/CL_0000068) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lacrimal drainage system](http://purl.obolibrary.org/obo/UBERON_0001850)) - - -### epithelial cell of lacrimal sac `http://purl.obolibrary.org/obo/CL_1000436` -#### Removed -- [epithelial cell of lacrimal sac](http://purl.obolibrary.org/obo/CL_1000436) SubClassOf [duct epithelial cell](http://purl.obolibrary.org/obo/CL_0000068) - -#### Added -- [epithelial cell of lacrimal sac](http://purl.obolibrary.org/obo/CL_1000436) SubClassOf [epithelial cell of nasolacrimal duct](http://purl.obolibrary.org/obo/CL_1000437) - - -### epithelial cell of late distal convoluted tubule `http://purl.obolibrary.org/obo/CL_4030017` -#### Removed -- [epithelial cell of late distal convoluted tubule](http://purl.obolibrary.org/obo/CL_4030017) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### epithelial cell of proximal tubule `http://purl.obolibrary.org/obo/CL_0002306` -#### Removed -- [epithelial cell of proximal tubule](http://purl.obolibrary.org/obo/CL_0002306) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:62125" - -#### Added -- [epithelial cell of proximal tubule](http://purl.obolibrary.org/obo/CL_0002306) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### epithelial cell of proximal tubule segment 1 `http://purl.obolibrary.org/obo/CL_4030009` -#### Removed -- [epithelial cell of proximal tubule segment 1](http://purl.obolibrary.org/obo/CL_4030009) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### epithelial cell of proximal tubule segment 2 `http://purl.obolibrary.org/obo/CL_4030010` -#### Removed -- [epithelial cell of proximal tubule segment 2](http://purl.obolibrary.org/obo/CL_4030010) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### epithelial cell of proximal tubule segment 3 `http://purl.obolibrary.org/obo/CL_4030011` -#### Removed -- [epithelial cell of proximal tubule segment 3](http://purl.obolibrary.org/obo/CL_4030011) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### epithelial to mesenchymal transition `http://purl.obolibrary.org/obo/GO_0001837` -#### Removed -- [epithelial to mesenchymal transition](http://purl.obolibrary.org/obo/GO_0001837) EquivalentTo [cell differentiation](http://purl.obolibrary.org/obo/GO_0030154) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) - -- [epithelial to mesenchymal transition](http://purl.obolibrary.org/obo/GO_0001837) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) - -#### Added -- [epithelial to mesenchymal transition](http://purl.obolibrary.org/obo/GO_0001837) EquivalentTo [cell differentiation](http://purl.obolibrary.org/obo/GO_0030154) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) - -- [epithelial to mesenchymal transition](http://purl.obolibrary.org/obo/GO_0001837) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) - - -### epithelial-mesenchymal cell signaling `http://purl.obolibrary.org/obo/GO_0060684` - -#### Added -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "dph" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epithelial-mesenchymal cell signalling" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelial-mesenchymal cell signaling" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2009-06-03T06:36:46Z" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060684" - -- Class: [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019) - -- [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) SubClassOf [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) - - -### epithelial-mesenchymal cell signaling involved in lung development `http://purl.obolibrary.org/obo/GO_0061111` - -#### Added -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epithelial-mesenchymal cell signalling involved in lung development" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2010-05-05T11:14:38Z" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "dph" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0061111" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelial-mesenchymal cell signaling involved in lung development" - -- Class: [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) EquivalentTo [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lung development](http://purl.obolibrary.org/obo/GO_0030324)) - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) SubClassOf [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) - -- [epithelial-mesenchymal cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0061111) SubClassOf [cell-cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060495) - - -### epithelial-mesenchymal signaling involved in prostate gland development `http://purl.obolibrary.org/obo/GO_0060738` - -#### Added -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060738" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2009-06-15T09:31:31Z" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted and contributes to the progression of the prostate gland over time." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "dph" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelial-mesenchymal signaling involved in prostate gland development" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "epithelial-mesenchymal signalling involved in prostate gland development" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- Class: [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) EquivalentTo [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [prostate gland development](http://purl.obolibrary.org/obo/GO_0030850)) - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [prostate gland development](http://purl.obolibrary.org/obo/GO_0030850) - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) SubClassOf [reproductive process](http://purl.obolibrary.org/obo/GO_0022414) - -- [epithelial-mesenchymal signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060738) SubClassOf [epithelial-mesenchymal cell signaling](http://purl.obolibrary.org/obo/GO_0060684) - - -### epithelium `http://purl.obolibrary.org/obo/UBERON_0000483` -#### Removed -- [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### esophagus `http://purl.obolibrary.org/obo/UBERON_0001043` -#### Removed -- [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### estradiol binding `http://purl.obolibrary.org/obo/GO_1903924` -#### Removed -- [estradiol binding](http://purl.obolibrary.org/obo/GO_1903924) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - -- [estradiol binding](http://purl.obolibrary.org/obo/GO_1903924) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965) - -#### Added -- [estradiol binding](http://purl.obolibrary.org/obo/GO_1903924) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - -- [estradiol binding](http://purl.obolibrary.org/obo/GO_1903924) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965) - - -### ethmoid bone `http://purl.obolibrary.org/obo/UBERON_0001679` -#### Removed -- [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ethmoid foramen `http://purl.obolibrary.org/obo/UBERON_0018415` -#### Removed -- [ethmoid foramen](http://purl.obolibrary.org/obo/UBERON_0018415) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ethmoid foramina" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [ethmoid foramen](http://purl.obolibrary.org/obo/UBERON_0018415) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ethmoidal foramina" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [ethmoid foramen](http://purl.obolibrary.org/obo/UBERON_0018415) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ethmoid foramina" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [ethmoid foramen](http://purl.obolibrary.org/obo/UBERON_0018415) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ethmoidal foramina" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### euchromatin binding `http://purl.obolibrary.org/obo/GO_1990188` -#### Removed -- [euchromatin binding](http://purl.obolibrary.org/obo/GO_1990188) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [euchromatin](http://purl.obolibrary.org/obo/GO_0000791)) - -- [euchromatin binding](http://purl.obolibrary.org/obo/GO_1990188) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [euchromatin](http://purl.obolibrary.org/obo/GO_0000791) - -#### Added -- [euchromatin binding](http://purl.obolibrary.org/obo/GO_1990188) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [euchromatin](http://purl.obolibrary.org/obo/GO_0000791)) - -- [euchromatin binding](http://purl.obolibrary.org/obo/GO_1990188) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [euchromatin](http://purl.obolibrary.org/obo/GO_0000791) - - -### excretory system `http://purl.obolibrary.org/obo/UBERON_8450002` - -#### Added -- [excretory system](http://purl.obolibrary.org/obo/UBERON_8450002) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [excretory system](http://purl.obolibrary.org/obo/UBERON_8450002) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [excretory system](http://purl.obolibrary.org/obo/UBERON_8450002) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006338" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### external carotid artery `http://purl.obolibrary.org/obo/UBERON_0001070` -#### Removed -- [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### external cervical os `http://purl.obolibrary.org/obo/UBERON_0013760` -#### Removed -- [external cervical os](http://purl.obolibrary.org/obo/UBERON_0013760) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb" - -#### Added -- [external cervical os](http://purl.obolibrary.org/obo/UBERON_0013760) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### external ear `http://purl.obolibrary.org/obo/UBERON_0001691` -#### Removed -- [external ear](http://purl.obolibrary.org/obo/UBERON_0001691) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray907.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [external ear](http://purl.obolibrary.org/obo/UBERON_0001691) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray907.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### external ectoderm `http://purl.obolibrary.org/obo/UBERON_0000076` -#### Removed -- [external ectoderm](http://purl.obolibrary.org/obo/UBERON_0000076) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [external ectoderm](http://purl.obolibrary.org/obo/UBERON_0000076) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [external ectoderm](http://purl.obolibrary.org/obo/UBERON_0000076) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006242" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### external iliac artery `http://purl.obolibrary.org/obo/UBERON_0001308` -#### Removed -- [external iliac artery](http://purl.obolibrary.org/obo/UBERON_0001308) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray539.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [external iliac artery](http://purl.obolibrary.org/obo/UBERON_0001308) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray539.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### external iliac vein `http://purl.obolibrary.org/obo/UBERON_0001316` -#### Removed -- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### external naris `http://purl.obolibrary.org/obo/UBERON_0005928` -#### Removed -- [external naris](http://purl.obolibrary.org/obo/UBERON_0005928) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "external nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [external naris](http://purl.obolibrary.org/obo/UBERON_0005928) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000544" - -#### Added -- [external naris](http://purl.obolibrary.org/obo/UBERON_0005928) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "anterior nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000544" - -- [external naris](http://purl.obolibrary.org/obo/UBERON_0005928) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "external nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### extracellular matrix binding `http://purl.obolibrary.org/obo/GO_0050840` -#### Removed -- [extracellular matrix binding](http://purl.obolibrary.org/obo/GO_0050840) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [extracellular matrix](http://purl.obolibrary.org/obo/GO_0031012)) - -- [extracellular matrix binding](http://purl.obolibrary.org/obo/GO_0050840) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [extracellular matrix](http://purl.obolibrary.org/obo/GO_0031012) - -#### Added -- [extracellular matrix binding](http://purl.obolibrary.org/obo/GO_0050840) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [extracellular matrix](http://purl.obolibrary.org/obo/GO_0031012)) - -- [extracellular matrix binding](http://purl.obolibrary.org/obo/GO_0050840) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [extracellular matrix](http://purl.obolibrary.org/obo/GO_0031012) - - -### extraembryonic cavity `http://purl.obolibrary.org/obo/UBERON_0012466` -#### Removed -- [extraembryonic cavity](http://purl.obolibrary.org/obo/UBERON_0012466) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extraembryonic cavities" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0000472" - -#### Added -- [extraembryonic cavity](http://purl.obolibrary.org/obo/UBERON_0012466) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extraembryonic cavities" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0000472" - - -### extraembryonic structure `http://purl.obolibrary.org/obo/UBERON_0000478` -#### Removed -- [extraembryonic structure](http://purl.obolibrary.org/obo/UBERON_0000478) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extraembryonic structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000020" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [extraembryonic structure](http://purl.obolibrary.org/obo/UBERON_0000478) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extraembryonic structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000020" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### extraglomerular mesangium `http://purl.obolibrary.org/obo/UBERON_0002321` -#### Removed -- [extraglomerular mesangium](http://purl.obolibrary.org/obo/UBERON_0002321) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "check MA part_ofs - should be spatially disjoint from renal glomerulus?" - -#### Added -- [extraglomerular mesangium](http://purl.obolibrary.org/obo/UBERON_0002321) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE check MA part_ofs - should be spatially disjoint from renal glomerulus?" - - -### eye primordium `http://purl.obolibrary.org/obo/UBERON_0003071` -#### Removed -- [eye primordium](http://purl.obolibrary.org/obo/UBERON_0003071) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [eye primordium](http://purl.obolibrary.org/obo/UBERON_0003071) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### eye trabecular meshwork `http://purl.obolibrary.org/obo/UBERON_0005969` -#### Removed -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray870.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" - -#### Added -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray870.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eye trabecular meshwork](http://purl.obolibrary.org/obo/UBERON_0005969) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### eyelid `http://purl.obolibrary.org/obo/UBERON_0001711` -#### Removed -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/84/Eye_makeup.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "blephara" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "palpebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "palpebrae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "blephara" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/84/Eye_makeup.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fMet-Leu-Phe receptor binding `http://purl.obolibrary.org/obo/GO_0031761` -#### Removed -- [fMet-Leu-Phe receptor binding](http://purl.obolibrary.org/obo/GO_0031761) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [N-formyl peptide receptor](http://purl.obolibrary.org/obo/PR_000001431)) - -- [fMet-Leu-Phe receptor binding](http://purl.obolibrary.org/obo/GO_0031761) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [N-formyl peptide receptor](http://purl.obolibrary.org/obo/PR_000001431) - -#### Added -- [fMet-Leu-Phe receptor binding](http://purl.obolibrary.org/obo/GO_0031761) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [N-formyl peptide receptor](http://purl.obolibrary.org/obo/PR_000001431)) - -- [fMet-Leu-Phe receptor binding](http://purl.obolibrary.org/obo/GO_0031761) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [N-formyl peptide receptor](http://purl.obolibrary.org/obo/PR_000001431) - - -### face `http://purl.obolibrary.org/obo/UBERON_0001456` -#### Removed -- [face](http://purl.obolibrary.org/obo/UBERON_0001456) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Mona_Lisa_headcrop.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [face](http://purl.obolibrary.org/obo/UBERON_0001456) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Mona_Lisa_headcrop.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### facial artery `http://purl.obolibrary.org/obo/UBERON_0001612` -#### Removed -- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### facial muscle `http://purl.obolibrary.org/obo/UBERON_0001577` -#### Removed -- [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### facial nerve `http://purl.obolibrary.org/obo/UBERON_0001647` -#### Removed -- [facial nerve](http://purl.obolibrary.org/obo/UBERON_0001647) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1f/Cranial_nerve_VII.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [facial nerve](http://purl.obolibrary.org/obo/UBERON_0001647) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "7n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:827" - -#### Added -- [facial nerve](http://purl.obolibrary.org/obo/UBERON_0001647) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "7n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:827" - -- [facial nerve](http://purl.obolibrary.org/obo/UBERON_0001647) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1f/Cranial_nerve_VII.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### facial skeleton `http://purl.obolibrary.org/obo/UBERON_0011156` -#### Removed -- [facial skeleton](http://purl.obolibrary.org/obo/UBERON_0011156) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [facial skeleton](http://purl.obolibrary.org/obo/UBERON_0011156) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### facial vein `http://purl.obolibrary.org/obo/UBERON_0001653` -#### Removed -- [facial vein](http://purl.obolibrary.org/obo/UBERON_0001653) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [facial vein](http://purl.obolibrary.org/obo/UBERON_0001653) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### falciform ligament `http://purl.obolibrary.org/obo/UBERON_0001247` -#### Removed -- [falciform ligament](http://purl.obolibrary.org/obo/UBERON_0001247) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb" - -- [falciform ligament](http://purl.obolibrary.org/obo/UBERON_0001247) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb" - -#### Added -- [falciform ligament](http://purl.obolibrary.org/obo/UBERON_0001247) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [falciform ligament](http://purl.obolibrary.org/obo/UBERON_0001247) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fallopian tube `http://purl.obolibrary.org/obo/UBERON_0003889` -#### Removed -- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "salpinges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "salpinges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### fallopian tube ciliated cell `http://purl.obolibrary.org/obo/CL_4030007` -#### Removed -- [fallopian tube ciliated cell](http://purl.obolibrary.org/obo/CL_4030007) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### fallopian tube secretory epithelial cell `http://purl.obolibrary.org/obo/CL_4030006` -#### Removed -- [fallopian tube secretory epithelial cell](http://purl.obolibrary.org/obo/CL_4030006) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### fat cell `http://purl.obolibrary.org/obo/CL_0000136` -#### Removed -- [fat cell](http://purl.obolibrary.org/obo/CL_0000136) [label](http://www.w3.org/2000/01/rdf-schema#label) "fat cell" - -- [fat cell](http://purl.obolibrary.org/obo/CL_0000136) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "adipocyte" - -#### Added -- [fat cell](http://purl.obolibrary.org/obo/CL_0000136) [label](http://www.w3.org/2000/01/rdf-schema#label) "adipocyte" - -- [fat cell](http://purl.obolibrary.org/obo/CL_0000136) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fat cell" - - -### female germ-line stem cell asymmetric division `http://purl.obolibrary.org/obo/GO_0048132` -#### Removed -- [female germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048132) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [female germ line stem cell](http://purl.obolibrary.org/obo/CL_0000022)) - -- [female germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048132) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [female germ line stem cell](http://purl.obolibrary.org/obo/CL_0000022) - -#### Added -- [female germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048132) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [female germ line stem cell](http://purl.obolibrary.org/obo/CL_0000022)) - -- [female germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048132) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [female germ line stem cell](http://purl.obolibrary.org/obo/CL_0000022) - - -### female reproductive system `http://purl.obolibrary.org/obo/UBERON_0000474` -#### Removed -- [female reproductive system](http://purl.obolibrary.org/obo/UBERON_0000474) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [female reproductive system](http://purl.obolibrary.org/obo/UBERON_0000474) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "female genitals" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000156" - -#### Added -- [female reproductive system](http://purl.obolibrary.org/obo/UBERON_0000474) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "female genitals" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000156" - -- [female reproductive system](http://purl.obolibrary.org/obo/UBERON_0000474) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### female urethra `http://purl.obolibrary.org/obo/UBERON_0001334` -#### Removed -- [female urethra](http://purl.obolibrary.org/obo/UBERON_0001334) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [female urethra](http://purl.obolibrary.org/obo/UBERON_0001334) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### femoral artery `http://purl.obolibrary.org/obo/UBERON_0002060` -#### Removed -- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [femoral artery](http://purl.obolibrary.org/obo/UBERON_0002060) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### femur `http://purl.obolibrary.org/obo/UBERON_0000981` -#### Removed -- [femur](http://purl.obolibrary.org/obo/UBERON_0000981) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [femur](http://purl.obolibrary.org/obo/UBERON_0000981) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fibrinogen binding `http://purl.obolibrary.org/obo/GO_0070051` -#### Removed -- [fibrinogen binding](http://purl.obolibrary.org/obo/GO_0070051) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [fibrinogen complex](http://purl.obolibrary.org/obo/GO_0005577)) - -- [fibrinogen binding](http://purl.obolibrary.org/obo/GO_0070051) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [fibrinogen complex](http://purl.obolibrary.org/obo/GO_0005577) - -#### Added -- [fibrinogen binding](http://purl.obolibrary.org/obo/GO_0070051) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [fibrinogen complex](http://purl.obolibrary.org/obo/GO_0005577)) - -- [fibrinogen binding](http://purl.obolibrary.org/obo/GO_0070051) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [fibrinogen complex](http://purl.obolibrary.org/obo/GO_0005577) - - -### fibroblast activation `http://purl.obolibrary.org/obo/GO_0072537` -#### Removed -- [fibroblast activation](http://purl.obolibrary.org/obo/GO_0072537) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [fibroblast](http://purl.obolibrary.org/obo/CL_0000057)) - -- [fibroblast activation](http://purl.obolibrary.org/obo/GO_0072537) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [fibroblast](http://purl.obolibrary.org/obo/CL_0000057) - -#### Added -- [fibroblast activation](http://purl.obolibrary.org/obo/GO_0072537) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [fibroblast](http://purl.obolibrary.org/obo/CL_0000057)) - -- [fibroblast activation](http://purl.obolibrary.org/obo/GO_0072537) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [fibroblast](http://purl.obolibrary.org/obo/CL_0000057) - - -### fibrocartilage `http://purl.obolibrary.org/obo/UBERON_0001995` -#### Removed -- [fibrocartilage](http://purl.obolibrary.org/obo/UBERON_0001995) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray295.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fibrocartilage](http://purl.obolibrary.org/obo/UBERON_0001995) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray295.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fibula `http://purl.obolibrary.org/obo/UBERON_0001446` -#### Removed -- [fibula](http://purl.obolibrary.org/obo/UBERON_0001446) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/16/Illu_lower_extremity.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fibula](http://purl.obolibrary.org/obo/UBERON_0001446) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/16/Illu_lower_extremity.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### follicular dendritic cell activation `http://purl.obolibrary.org/obo/GO_0002266` -#### Removed -- [follicular dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002266) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [follicular dendritic cell](http://purl.obolibrary.org/obo/CL_0000442)) - -- [follicular dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002266) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [follicular dendritic cell](http://purl.obolibrary.org/obo/CL_0000442) - -#### Added -- [follicular dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002266) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [follicular dendritic cell](http://purl.obolibrary.org/obo/CL_0000442)) - -- [follicular dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002266) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [follicular dendritic cell](http://purl.obolibrary.org/obo/CL_0000442) - - -### follicular fluid `http://purl.obolibrary.org/obo/UBERON_0000038` -#### Removed -- [follicular fluid](http://purl.obolibrary.org/obo/UBERON_0000038) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [follicular fluid](http://purl.obolibrary.org/obo/UBERON_0000038) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### foramen magnum `http://purl.obolibrary.org/obo/UBERON_0003687` -#### Removed -- [foramen magnum](http://purl.obolibrary.org/obo/UBERON_0003687) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray130.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [foramen magnum](http://purl.obolibrary.org/obo/UBERON_0003687) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray130.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [foramen magnum](http://purl.obolibrary.org/obo/UBERON_0003687) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006035" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### foramen of skull `http://purl.obolibrary.org/obo/UBERON_0013685` -#### Removed -- [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "foramina of the skull" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Foramina_of_the_skull" - -#### Added -- [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "foramina of the skull" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Foramina_of_the_skull" - - -### foramen rotundum `http://purl.obolibrary.org/obo/UBERON_0005446` -#### Removed -- [foramen rotundum](http://purl.obolibrary.org/obo/UBERON_0005446) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [foramen rotundum](http://purl.obolibrary.org/obo/UBERON_0005446) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### forebrain `http://purl.obolibrary.org/obo/UBERON_0001890` -#### Removed -- [forebrain](http://purl.obolibrary.org/obo/UBERON_0001890) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [forebrain](http://purl.obolibrary.org/obo/UBERON_0001890) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "FB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1509" - -#### Added -- [forebrain](http://purl.obolibrary.org/obo/UBERON_0001890) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [forebrain](http://purl.obolibrary.org/obo/UBERON_0001890) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "FB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1509" - - -### foregut `http://purl.obolibrary.org/obo/UBERON_0001041` -#### Removed -- [foregut](http://purl.obolibrary.org/obo/UBERON_0001041) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray27.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [foregut](http://purl.obolibrary.org/obo/UBERON_0001041) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray27.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### forelimb muscle `http://purl.obolibrary.org/obo/UBERON_0003662` -#### Removed -- [forelimb muscle](http://purl.obolibrary.org/obo/UBERON_0003662) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "musculature of arm" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [forelimb muscle](http://purl.obolibrary.org/obo/UBERON_0003662) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "musculature of the arm" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [forelimb muscle](http://purl.obolibrary.org/obo/UBERON_0003662) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "musculature of the arm" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [forelimb muscle](http://purl.obolibrary.org/obo/UBERON_0003662) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "musculature of arm" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### forelimb zeugopod `http://purl.obolibrary.org/obo/UBERON_0002386` -#### Removed -- [forelimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0002386) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/50/Forearm_labeled.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [forelimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0002386) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Veins.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [forelimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0002386) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Veins.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [forelimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0002386) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/50/Forearm_labeled.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fornix of brain `http://purl.obolibrary.org/obo/UBERON_0000052` -#### Removed -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fornix of brain](http://purl.obolibrary.org/obo/UBERON_0000052) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fourth ventricle `http://purl.obolibrary.org/obo/UBERON_0002422` -#### Removed -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -#### Added -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fovea centralis `http://purl.obolibrary.org/obo/UBERON_0001786` -#### Removed -- [fovea centralis](http://purl.obolibrary.org/obo/UBERON_0001786) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fovea centralis](http://purl.obolibrary.org/obo/UBERON_0001786) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### frontal cortex `http://purl.obolibrary.org/obo/UBERON_0001870` -#### Removed -- [frontal cortex](http://purl.obolibrary.org/obo/UBERON_0001870) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray729.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [frontal cortex](http://purl.obolibrary.org/obo/UBERON_0001870) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray729.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### frontal sulcus `http://purl.obolibrary.org/obo/UBERON_0014639` -#### Removed -- [frontal sulcus](http://purl.obolibrary.org/obo/UBERON_0014639) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "frontal lobe sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:FLs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [frontal sulcus](http://purl.obolibrary.org/obo/UBERON_0014639) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "frontal lobe sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:FLs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### frontal suture `http://purl.obolibrary.org/obo/UBERON_0002490` -#### Removed -- [frontal suture](http://purl.obolibrary.org/obo/UBERON_0002490) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d1/Frontal_suture.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [frontal suture](http://purl.obolibrary.org/obo/UBERON_0002490) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray134.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [frontal suture](http://purl.obolibrary.org/obo/UBERON_0002490) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray134.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [frontal suture](http://purl.obolibrary.org/obo/UBERON_0002490) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d1/Frontal_suture.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### frontonasal prominence `http://purl.obolibrary.org/obo/UBERON_0004066` -#### Removed -- [frontonasal prominence](http://purl.obolibrary.org/obo/UBERON_0004066) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/98/Gray44.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [frontonasal prominence](http://purl.obolibrary.org/obo/UBERON_0004066) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/98/Gray44.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fundic gastric gland `http://purl.obolibrary.org/obo/UBERON_0010038` -#### Removed -- [fundic gastric gland](http://purl.obolibrary.org/obo/UBERON_0010038) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Fundic_gland_polyp_%281%29.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fundic gastric gland](http://purl.obolibrary.org/obo/UBERON_0010038) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Fundic_gland_polyp_%281%29.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fundus of stomach `http://purl.obolibrary.org/obo/UBERON_0001160` -#### Removed -- [fundus of stomach](http://purl.obolibrary.org/obo/UBERON_0001160) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [fundus of stomach](http://purl.obolibrary.org/obo/UBERON_0001160) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### fundus of urinary bladder `http://purl.obolibrary.org/obo/UBERON_0006082` -#### Removed -- [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb" - -- [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb" - -#### Added -- [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gallbladder `http://purl.obolibrary.org/obo/UBERON_0002110` -#### Removed -- [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/f/f4/Abdomal_organs.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/f/f4/Abdomal_organs.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gamma-delta T cell activation `http://purl.obolibrary.org/obo/GO_0046629` -#### Removed -- [gamma-delta T cell activation](http://purl.obolibrary.org/obo/GO_0046629) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [gamma-delta T cell](http://purl.obolibrary.org/obo/CL_0000798)) - -- [gamma-delta T cell activation](http://purl.obolibrary.org/obo/GO_0046629) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [gamma-delta T cell](http://purl.obolibrary.org/obo/CL_0000798) - -#### Added -- [gamma-delta T cell activation](http://purl.obolibrary.org/obo/GO_0046629) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [gamma-delta T cell](http://purl.obolibrary.org/obo/CL_0000798)) - -- [gamma-delta T cell activation](http://purl.obolibrary.org/obo/GO_0046629) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [gamma-delta T cell](http://purl.obolibrary.org/obo/CL_0000798) - - -### ganglion `http://purl.obolibrary.org/obo/UBERON_0000045` - -#### Added -- [ganglion](http://purl.obolibrary.org/obo/UBERON_0000045) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [ganglion](http://purl.obolibrary.org/obo/UBERON_0000045) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### ganglionic eminence `http://purl.obolibrary.org/obo/UBERON_0004023` -#### Removed -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "embryonic GE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "GE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SVZ" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0004274" - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "embryonic SVZ" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "embryonic SVZ" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "GE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "embryonic GE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004023) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SVZ" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0004274" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### ganglionic layer of retina `http://purl.obolibrary.org/obo/UBERON_0001792` -#### Removed -- [ganglionic layer of retina](http://purl.obolibrary.org/obo/UBERON_0001792) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ganglionic layer of retina](http://purl.obolibrary.org/obo/UBERON_0001792) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gastroesophageal sphincter `http://purl.obolibrary.org/obo/UBERON_0004550` -#### Removed -- [gastroesophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0004550) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LES" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cardia" - -#### Added -- [gastroesophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0004550) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LES" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cardia" - - -### geniculate ganglion `http://purl.obolibrary.org/obo/UBERON_0001700` -#### Removed -- [geniculate ganglion](http://purl.obolibrary.org/obo/UBERON_0001700) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [geniculate ganglion](http://purl.obolibrary.org/obo/UBERON_0001700) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### genioglossus muscle `http://purl.obolibrary.org/obo/UBERON_0001571` -#### Removed -- [genioglossus muscle](http://purl.obolibrary.org/obo/UBERON_0001571) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Genioglossus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [genioglossus muscle](http://purl.obolibrary.org/obo/UBERON_0001571) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Genioglossus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### germ-line stem cell division `http://purl.obolibrary.org/obo/GO_0042078` -#### Removed -- [germ-line stem cell division](http://purl.obolibrary.org/obo/GO_0042078) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014)) - -- [germ-line stem cell division](http://purl.obolibrary.org/obo/GO_0042078) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014) - -#### Added -- [germ-line stem cell division](http://purl.obolibrary.org/obo/GO_0042078) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014)) - -- [germ-line stem cell division](http://purl.obolibrary.org/obo/GO_0042078) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014) - - -### germinal center `http://purl.obolibrary.org/obo/UBERON_0010754` -#### Removed -- [germinal center](http://purl.obolibrary.org/obo/UBERON_0010754) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/60/Germinal_center.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [germinal center](http://purl.obolibrary.org/obo/UBERON_0010754) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/60/Germinal_center.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [germinal center](http://purl.obolibrary.org/obo/UBERON_0010754) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [germinal center](http://purl.obolibrary.org/obo/UBERON_0010754) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### germline stem cell asymmetric division `http://purl.obolibrary.org/obo/GO_0098728` -#### Removed -- [germline stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0098728) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014)) - -#### Added -- [germline stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0098728) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [germ line stem cell](http://purl.obolibrary.org/obo/CL_0000014)) - - -### gingiva `http://purl.obolibrary.org/obo/UBERON_0001828` -#### Removed -- [gingiva](http://purl.obolibrary.org/obo/UBERON_0001828) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gingiva](http://purl.obolibrary.org/obo/UBERON_0001828) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gingival groove `http://purl.obolibrary.org/obo/UBERON_0008805` -#### Removed -- [gingival groove](http://purl.obolibrary.org/obo/UBERON_0008805) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/5e/Gingival_sulcus.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gingival groove](http://purl.obolibrary.org/obo/UBERON_0008805) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/5e/Gingival_sulcus.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gland `http://purl.obolibrary.org/obo/UBERON_0002530` -#### Removed -- [gland](http://purl.obolibrary.org/obo/UBERON_0002530) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray1026.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gland](http://purl.obolibrary.org/obo/UBERON_0002530) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray1026.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glandular acinus `http://purl.obolibrary.org/obo/UBERON_0009842` -#### Removed -- [glandular acinus](http://purl.obolibrary.org/obo/UBERON_0009842) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [glandular acinus](http://purl.obolibrary.org/obo/UBERON_0009842) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acini" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Acinus" - -#### Added -- [glandular acinus](http://purl.obolibrary.org/obo/UBERON_0009842) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acini" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Acinus" - -- [glandular acinus](http://purl.obolibrary.org/obo/UBERON_0009842) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glans clitoris `http://purl.obolibrary.org/obo/UBERON_0006653` -#### Removed -- [glans clitoris](http://purl.obolibrary.org/obo/UBERON_0006653) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glans clitoris](http://purl.obolibrary.org/obo/UBERON_0006653) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glans penis `http://purl.obolibrary.org/obo/UBERON_0001299` -#### Removed -- [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/13/Anteriorglanspenis.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/13/Anteriorglanspenis.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glenohumeral joint `http://purl.obolibrary.org/obo/UBERON_0001470` -#### Removed -- [glenohumeral joint](http://purl.obolibrary.org/obo/UBERON_0001470) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray327.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glenohumeral joint](http://purl.obolibrary.org/obo/UBERON_0001470) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray327.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glenoid fossa `http://purl.obolibrary.org/obo/UBERON_0006657` -#### Removed -- [glenoid fossa](http://purl.obolibrary.org/obo/UBERON_0006657) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray328.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glenoid fossa](http://purl.obolibrary.org/obo/UBERON_0006657) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray328.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glial cell activation `http://purl.obolibrary.org/obo/GO_0061900` -#### Removed -- [glial cell activation](http://purl.obolibrary.org/obo/GO_0061900) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [glial cell](http://purl.obolibrary.org/obo/CL_0000125)) - -- [glial cell activation](http://purl.obolibrary.org/obo/GO_0061900) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [glial cell](http://purl.obolibrary.org/obo/CL_0000125) - -#### Added -- [glial cell activation](http://purl.obolibrary.org/obo/GO_0061900) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [glial cell](http://purl.obolibrary.org/obo/CL_0000125)) - -- [glial cell activation](http://purl.obolibrary.org/obo/GO_0061900) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [glial cell](http://purl.obolibrary.org/obo/CL_0000125) - - -### glioblast division `http://purl.obolibrary.org/obo/GO_0048860` -#### Removed -- [glioblast division](http://purl.obolibrary.org/obo/GO_0048860) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [glioblast](http://purl.obolibrary.org/obo/CL_0000030)) - -- [glioblast division](http://purl.obolibrary.org/obo/GO_0048860) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [glioblast](http://purl.obolibrary.org/obo/CL_0000030) - -#### Added -- [glioblast division](http://purl.obolibrary.org/obo/GO_0048860) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [glioblast](http://purl.obolibrary.org/obo/CL_0000030)) - -- [glioblast division](http://purl.obolibrary.org/obo/GO_0048860) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [glioblast](http://purl.obolibrary.org/obo/CL_0000030) - - -### glomerular basement membrane `http://purl.obolibrary.org/obo/UBERON_0005777` -#### Removed -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "GBM" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "GBM" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### glomerular capillary `http://purl.obolibrary.org/obo/UBERON_0004212` -#### Removed -- [glomerular capillary](http://purl.obolibrary.org/obo/UBERON_0004212) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "glomerular capillaries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [glomerular capillary](http://purl.obolibrary.org/obo/UBERON_0004212) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "glomerular capillaries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### glomerular capsule `http://purl.obolibrary.org/obo/UBERON_0001230` -#### Removed -- [glomerular capsule](http://purl.obolibrary.org/obo/UBERON_0001230) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glomerular capsule](http://purl.obolibrary.org/obo/UBERON_0001230) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glomerular endothelial cell `http://purl.obolibrary.org/obo/CL_0002188` - -#### Added -- [glomerular endothelial cell](http://purl.obolibrary.org/obo/CL_0002188) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### glossopharyngeal ganglion `http://purl.obolibrary.org/obo/UBERON_0001701` - -#### Added -- [glossopharyngeal ganglion](http://purl.obolibrary.org/obo/UBERON_0001701) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [glossopharyngeal ganglion](http://purl.obolibrary.org/obo/UBERON_0001701) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### glossopharyngeal nerve `http://purl.obolibrary.org/obo/UBERON_0001649` -#### Removed -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "9n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:899" - -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "CN-IX" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "9n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:899" - -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "CN-IX" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [glossopharyngeal nerve](http://purl.obolibrary.org/obo/UBERON_0001649) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### glucagon receptor activity `http://purl.obolibrary.org/obo/GO_0004967` -#### Removed -- [glucagon receptor activity](http://purl.obolibrary.org/obo/GO_0004967) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - -- [glucagon receptor activity](http://purl.obolibrary.org/obo/GO_0004967) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391) - -#### Added -- [glucagon receptor activity](http://purl.obolibrary.org/obo/GO_0004967) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - -- [glucagon receptor activity](http://purl.obolibrary.org/obo/GO_0004967) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391) - - -### glucose binding `http://purl.obolibrary.org/obo/GO_0005536` -#### Removed -- [glucose binding](http://purl.obolibrary.org/obo/GO_0005536) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - -- [glucose binding](http://purl.obolibrary.org/obo/GO_0005536) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234) - -#### Added -- [glucose binding](http://purl.obolibrary.org/obo/GO_0005536) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - -- [glucose binding](http://purl.obolibrary.org/obo/GO_0005536) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234) - - -### glutamate binding `http://purl.obolibrary.org/obo/GO_0016595` -#### Removed -- [glutamate binding](http://purl.obolibrary.org/obo/GO_0016595) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) - -- [glutamate binding](http://purl.obolibrary.org/obo/GO_0016595) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321) - -#### Added -- [glutamate binding](http://purl.obolibrary.org/obo/GO_0016595) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) - -- [glutamate binding](http://purl.obolibrary.org/obo/GO_0016595) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321) - - -### glutamate receptor activity `http://purl.obolibrary.org/obo/GO_0008066` -#### Removed -- [glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0008066) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) - -- [glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0008066) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321) - -#### Added -- [glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0008066) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321)) - -- [glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0008066) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_14321](http://purl.obolibrary.org/obo/CHEBI_14321) - - -### glycine binding `http://purl.obolibrary.org/obo/GO_0016594` -#### Removed -- [glycine binding](http://purl.obolibrary.org/obo/GO_0016594) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - -- [glycine binding](http://purl.obolibrary.org/obo/GO_0016594) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305) - -#### Added -- [glycine binding](http://purl.obolibrary.org/obo/GO_0016594) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - -- [glycine binding](http://purl.obolibrary.org/obo/GO_0016594) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305) - - -### glycinergic amacrine cell `http://purl.obolibrary.org/obo/CL_4030028` -#### Removed -- [glycinergic amacrine cell](http://purl.obolibrary.org/obo/CL_4030028) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### glycogen binding `http://purl.obolibrary.org/obo/GO_2001069` -#### Removed -- [glycogen binding](http://purl.obolibrary.org/obo/GO_2001069) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28087](http://purl.obolibrary.org/obo/CHEBI_28087)) - -- [glycogen binding](http://purl.obolibrary.org/obo/GO_2001069) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28087](http://purl.obolibrary.org/obo/CHEBI_28087) - -#### Added -- [glycogen binding](http://purl.obolibrary.org/obo/GO_2001069) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28087](http://purl.obolibrary.org/obo/CHEBI_28087)) - -- [glycogen binding](http://purl.obolibrary.org/obo/GO_2001069) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28087](http://purl.obolibrary.org/obo/CHEBI_28087) - - -### glycosaminoglycan binding `http://purl.obolibrary.org/obo/GO_0005539` -#### Removed -- [glycosaminoglycan binding](http://purl.obolibrary.org/obo/GO_0005539) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18085](http://purl.obolibrary.org/obo/CHEBI_18085)) - -- [glycosaminoglycan binding](http://purl.obolibrary.org/obo/GO_0005539) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18085](http://purl.obolibrary.org/obo/CHEBI_18085) - -#### Added -- [glycosaminoglycan binding](http://purl.obolibrary.org/obo/GO_0005539) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18085](http://purl.obolibrary.org/obo/CHEBI_18085)) - -- [glycosaminoglycan binding](http://purl.obolibrary.org/obo/GO_0005539) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18085](http://purl.obolibrary.org/obo/CHEBI_18085) - - -### glycosphingolipid binding `http://purl.obolibrary.org/obo/GO_0043208` -#### Removed -- [glycosphingolipid binding](http://purl.obolibrary.org/obo/GO_0043208) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24402](http://purl.obolibrary.org/obo/CHEBI_24402)) - -- [glycosphingolipid binding](http://purl.obolibrary.org/obo/GO_0043208) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24402](http://purl.obolibrary.org/obo/CHEBI_24402) - -#### Added -- [glycosphingolipid binding](http://purl.obolibrary.org/obo/GO_0043208) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24402](http://purl.obolibrary.org/obo/CHEBI_24402)) - -- [glycosphingolipid binding](http://purl.obolibrary.org/obo/GO_0043208) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24402](http://purl.obolibrary.org/obo/CHEBI_24402) - - -### gonad `http://purl.obolibrary.org/obo/UBERON_0000991` -#### Removed -- [gonad](http://purl.obolibrary.org/obo/UBERON_0000991) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gonads" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000413" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [gonad](http://purl.obolibrary.org/obo/UBERON_0000991) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gonads" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000413" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### gonadal ridge `http://purl.obolibrary.org/obo/UBERON_0005294` -#### Removed -- [gonadal ridge](http://purl.obolibrary.org/obo/UBERON_0005294) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1106.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gonadal ridge](http://purl.obolibrary.org/obo/UBERON_0005294) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1106.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gonadal vein `http://purl.obolibrary.org/obo/UBERON_0003848` -#### Removed -- [gonadal vein](http://purl.obolibrary.org/obo/UBERON_0003848) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gonadal vein](http://purl.obolibrary.org/obo/UBERON_0003848) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### granulocyte activation `http://purl.obolibrary.org/obo/GO_0036230` -#### Removed -- [granulocyte activation](http://purl.obolibrary.org/obo/GO_0036230) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [granulocyte](http://purl.obolibrary.org/obo/CL_0000094)) - -- [granulocyte activation](http://purl.obolibrary.org/obo/GO_0036230) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [granulocyte](http://purl.obolibrary.org/obo/CL_0000094) - -#### Added -- [granulocyte activation](http://purl.obolibrary.org/obo/GO_0036230) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [granulocyte](http://purl.obolibrary.org/obo/CL_0000094)) - -- [granulocyte activation](http://purl.obolibrary.org/obo/GO_0036230) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [granulocyte](http://purl.obolibrary.org/obo/CL_0000094) - - -### granulosa cell layer `http://purl.obolibrary.org/obo/UBERON_0005170` -#### Removed -- [granulosa cell layer](http://purl.obolibrary.org/obo/UBERON_0005170) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "granulosa cell layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001112" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [granulosa cell layer](http://purl.obolibrary.org/obo/UBERON_0005170) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "granulosa cell layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001112" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### gray matter `http://purl.obolibrary.org/obo/UBERON_0002020` -#### Removed -- [gray matter](http://purl.obolibrary.org/obo/UBERON_0002020) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gray matter](http://purl.obolibrary.org/obo/UBERON_0002020) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### great saphenous vein `http://purl.obolibrary.org/obo/UBERON_0001363` -#### Removed -- [great saphenous vein](http://purl.obolibrary.org/obo/UBERON_0001363) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/51/Great_saphenous_vein.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [great saphenous vein](http://purl.obolibrary.org/obo/UBERON_0001363) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/51/Great_saphenous_vein.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gustatory papilla of tongue `http://purl.obolibrary.org/obo/UBERON_0014389` -#### Removed -- [gustatory papilla of tongue](http://purl.obolibrary.org/obo/UBERON_0014389) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gustatory papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [gustatory papilla of tongue](http://purl.obolibrary.org/obo/UBERON_0014389) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "taste papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [gustatory papilla of tongue](http://purl.obolibrary.org/obo/UBERON_0014389) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gustatory papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [gustatory papilla of tongue](http://purl.obolibrary.org/obo/UBERON_0014389) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "taste papillae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### gustatory pore `http://purl.obolibrary.org/obo/UBERON_0007691` -#### Removed -- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/0/0e/Taste_bud.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/0/0e/Taste_bud.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### gyrus `http://purl.obolibrary.org/obo/UBERON_0000200` -#### Removed -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "folia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gyri of cerebrum" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gyri" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gyri of cerebrum" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gyri" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [gyrus](http://purl.obolibrary.org/obo/UBERON_0000200) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "folia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### hair follicle `http://purl.obolibrary.org/obo/UBERON_0002073` -#### Removed -- [hair follicle](http://purl.obolibrary.org/obo/UBERON_0002073) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4d/Hair_follicle-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hair follicle](http://purl.obolibrary.org/obo/UBERON_0002073) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4d/Hair_follicle-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### head `http://purl.obolibrary.org/obo/UBERON_0000033` -#### Removed -- [head](http://purl.obolibrary.org/obo/UBERON_0000033) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00000004" - - - -### heart `http://purl.obolibrary.org/obo/UBERON_0000948` -#### Removed -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Heart.glb" - -#### Added -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart](http://purl.obolibrary.org/obo/UBERON_0000948) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### heart left ventricle `http://purl.obolibrary.org/obo/UBERON_0002084` -#### Removed -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -#### Added -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### heart plus pericardium `http://purl.obolibrary.org/obo/UBERON_0015410` - -#### Added -- [heart plus pericardium](http://purl.obolibrary.org/obo/UBERON_0015410) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [heart plus pericardium](http://purl.obolibrary.org/obo/UBERON_0015410) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### heart right ventricle `http://purl.obolibrary.org/obo/UBERON_0002080` -#### Removed -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hematopoietic stem cell `http://purl.obolibrary.org/obo/CL_0000037` -#### Removed -- [hematopoietic stem cell](http://purl.obolibrary.org/obo/CL_0000037) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:70337" - - - -### hematopoietic system `http://purl.obolibrary.org/obo/UBERON_0002390` - -#### Added -- [hematopoietic system](http://purl.obolibrary.org/obo/UBERON_0002390) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [hematopoietic system](http://purl.obolibrary.org/obo/UBERON_0002390) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### heparin binding `http://purl.obolibrary.org/obo/GO_0008201` -#### Removed -- [heparin binding](http://purl.obolibrary.org/obo/GO_0008201) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24505](http://purl.obolibrary.org/obo/CHEBI_24505)) - -- [heparin binding](http://purl.obolibrary.org/obo/GO_0008201) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24505](http://purl.obolibrary.org/obo/CHEBI_24505) - -#### Added -- [heparin binding](http://purl.obolibrary.org/obo/GO_0008201) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24505](http://purl.obolibrary.org/obo/CHEBI_24505)) - -- [heparin binding](http://purl.obolibrary.org/obo/GO_0008201) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24505](http://purl.obolibrary.org/obo/CHEBI_24505) - - -### hepatic artery `http://purl.obolibrary.org/obo/UBERON_0001193` -#### Removed -- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Common_and_proper_hepatic_artery.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4c/Common_and_proper_hepatic_artery.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hepatic diverticulum `http://purl.obolibrary.org/obo/UBERON_0008835` -#### Removed -- [hepatic diverticulum](http://purl.obolibrary.org/obo/UBERON_0008835) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hepatic diverticulum](http://purl.obolibrary.org/obo/UBERON_0008835) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hepatic portal vein `http://purl.obolibrary.org/obo/UBERON_0001639` -#### Removed -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hepatic portal vein](http://purl.obolibrary.org/obo/UBERON_0001639) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hepatic stellate cell activation `http://purl.obolibrary.org/obo/GO_0035733` -#### Removed -- [hepatic stellate cell activation](http://purl.obolibrary.org/obo/GO_0035733) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [hepatic stellate cell](http://purl.obolibrary.org/obo/CL_0000632)) - -- [hepatic stellate cell activation](http://purl.obolibrary.org/obo/GO_0035733) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [hepatic stellate cell](http://purl.obolibrary.org/obo/CL_0000632) - -#### Added -- [hepatic stellate cell activation](http://purl.obolibrary.org/obo/GO_0035733) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [hepatic stellate cell](http://purl.obolibrary.org/obo/CL_0000632)) - -- [hepatic stellate cell activation](http://purl.obolibrary.org/obo/GO_0035733) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [hepatic stellate cell](http://purl.obolibrary.org/obo/CL_0000632) - - -### hepatic vein `http://purl.obolibrary.org/obo/UBERON_0001143` -#### Removed -- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "hepatic veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "hepatic veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### hepatopancreatic ampulla `http://purl.obolibrary.org/obo/UBERON_0004913` -#### Removed -- [hepatopancreatic ampulla](http://purl.obolibrary.org/obo/UBERON_0004913) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Biliary_system_new.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hepatopancreatic ampulla](http://purl.obolibrary.org/obo/UBERON_0004913) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Biliary_system_new.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### heterocyclic compound binding `http://purl.obolibrary.org/obo/GO_1901363` -#### Removed -- [heterocyclic compound binding](http://purl.obolibrary.org/obo/GO_1901363) EquivalentTo [small molecule binding](http://purl.obolibrary.org/obo/GO_0036094) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5686](http://purl.obolibrary.org/obo/CHEBI_5686)) - -- [heterocyclic compound binding](http://purl.obolibrary.org/obo/GO_1901363) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5686](http://purl.obolibrary.org/obo/CHEBI_5686) - -#### Added -- [heterocyclic compound binding](http://purl.obolibrary.org/obo/GO_1901363) EquivalentTo [small molecule binding](http://purl.obolibrary.org/obo/GO_0036094) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5686](http://purl.obolibrary.org/obo/CHEBI_5686)) - -- [heterocyclic compound binding](http://purl.obolibrary.org/obo/GO_1901363) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5686](http://purl.obolibrary.org/obo/CHEBI_5686) - - -### high endothelial venule `http://purl.obolibrary.org/obo/UBERON_8410037` -#### Removed -- [high endothelial venule](http://purl.obolibrary.org/obo/UBERON_8410037) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "HEV" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [high endothelial venule](http://purl.obolibrary.org/obo/UBERON_8410037) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "HEV" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### hillock cell `http://purl.obolibrary.org/obo/CL_4030024` -#### Removed -- [hillock cell](http://purl.obolibrary.org/obo/CL_4030024) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](http://orcid.org/0000-0002-1773-2692) - - - -### hindbrain `http://purl.obolibrary.org/obo/UBERON_0002028` -#### Removed -- [hindbrain](http://purl.obolibrary.org/obo/UBERON_0002028) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hindbrain](http://purl.obolibrary.org/obo/UBERON_0002028) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hindbrain marginal layer `http://purl.obolibrary.org/obo/UBERON_0034709` -#### Removed -- [hindbrain marginal layer](http://purl.obolibrary.org/obo/UBERON_0034709) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MZH" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12694" - -#### Added -- [hindbrain marginal layer](http://purl.obolibrary.org/obo/UBERON_0034709) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MZH" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12694" - - -### hindgut `http://purl.obolibrary.org/obo/UBERON_0001046` -#### Removed -- [hindgut](http://purl.obolibrary.org/obo/UBERON_0001046) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hindgut](http://purl.obolibrary.org/obo/UBERON_0001046) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hindlimb `http://purl.obolibrary.org/obo/UBERON_0002103` -#### Removed -- [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray1239.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray1239.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hindlimb stylopod `http://purl.obolibrary.org/obo/UBERON_0000376` -#### Removed -- [hindlimb stylopod](http://purl.obolibrary.org/obo/UBERON_0000376) [UBPROP_0000013](http://purl.obolibrary.org/obo/UBPROP_0000013) "Naming conventions for pod terms under discussion within phenoscape group." - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/61" - -- [hindlimb stylopod](http://purl.obolibrary.org/obo/UBERON_0000376) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4b/Gray1238.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hindlimb stylopod](http://purl.obolibrary.org/obo/UBERON_0000376) [UBPROP_0000013](http://purl.obolibrary.org/obo/UBPROP_0000013) "Naming conventions for pod terms under discussion within phenoscape group." - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/61" - -- [hindlimb stylopod](http://purl.obolibrary.org/obo/UBERON_0000376) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4b/Gray1238.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hip `http://purl.obolibrary.org/obo/UBERON_0001464` -#### Removed -- [hip](http://purl.obolibrary.org/obo/UBERON_0001464) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Hip.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hip](http://purl.obolibrary.org/obo/UBERON_0001464) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Hip.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hippocampal formation `http://purl.obolibrary.org/obo/UBERON_0002421` - -#### Added -- [hippocampal formation](http://purl.obolibrary.org/obo/UBERON_0002421) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [hippocampal formation](http://purl.obolibrary.org/obo/UBERON_0002421) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### hippocampus fimbria `http://purl.obolibrary.org/obo/UBERON_0002310` -#### Removed -- [hippocampus fimbria](http://purl.obolibrary.org/obo/UBERON_0002310) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray749.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hippocampus fimbria](http://purl.obolibrary.org/obo/UBERON_0002310) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray749.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hippocampus pyramidal layer `http://purl.obolibrary.org/obo/UBERON_0002313` -#### Removed -- [hippocampus pyramidal layer](http://purl.obolibrary.org/obo/UBERON_0002313) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "this layer changes in its depthwise spatial relation across its extent" - -#### Added -- [hippocampus pyramidal layer](http://purl.obolibrary.org/obo/UBERON_0002313) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE this layer changes in its depthwise spatial relation across its extent" - - -### histamine binding `http://purl.obolibrary.org/obo/GO_0051381` -#### Removed -- [histamine binding](http://purl.obolibrary.org/obo/GO_0051381) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [histamine binding](http://purl.obolibrary.org/obo/GO_0051381) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - -#### Added -- [histamine binding](http://purl.obolibrary.org/obo/GO_0051381) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [histamine binding](http://purl.obolibrary.org/obo/GO_0051381) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - - -### histamine receptor activity `http://purl.obolibrary.org/obo/GO_0004969` -#### Removed -- [histamine receptor activity](http://purl.obolibrary.org/obo/GO_0004969) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [histamine receptor activity](http://purl.obolibrary.org/obo/GO_0004969) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - -#### Added -- [histamine receptor activity](http://purl.obolibrary.org/obo/GO_0004969) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [histamine receptor activity](http://purl.obolibrary.org/obo/GO_0004969) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - - -### humerus `http://purl.obolibrary.org/obo/UBERON_0000976` -#### Removed -- [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "humeri" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "humeri" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hyaline cartilage tissue `http://purl.obolibrary.org/obo/UBERON_0001994` -#### Removed -- [hyaline cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001994) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hyaline cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001994) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray292.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hyaline cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001994) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray292.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hyaline cartilage tissue](http://purl.obolibrary.org/obo/UBERON_0001994) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hyaluronic acid binding `http://purl.obolibrary.org/obo/GO_0005540` -#### Removed -- [hyaluronic acid binding](http://purl.obolibrary.org/obo/GO_0005540) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16336](http://purl.obolibrary.org/obo/CHEBI_16336)) - -- [hyaluronic acid binding](http://purl.obolibrary.org/obo/GO_0005540) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16336](http://purl.obolibrary.org/obo/CHEBI_16336) - -#### Added -- [hyaluronic acid binding](http://purl.obolibrary.org/obo/GO_0005540) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16336](http://purl.obolibrary.org/obo/CHEBI_16336)) - -- [hyaluronic acid binding](http://purl.obolibrary.org/obo/GO_0005540) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16336](http://purl.obolibrary.org/obo/CHEBI_16336) - - -### hydroxyapatite binding `http://purl.obolibrary.org/obo/GO_0046848` -#### Removed -- [hydroxyapatite binding](http://purl.obolibrary.org/obo/GO_0046848) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_52255](http://purl.obolibrary.org/obo/CHEBI_52255)) - -- [hydroxyapatite binding](http://purl.obolibrary.org/obo/GO_0046848) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_52255](http://purl.obolibrary.org/obo/CHEBI_52255) - -#### Added -- [hydroxyapatite binding](http://purl.obolibrary.org/obo/GO_0046848) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_52255](http://purl.obolibrary.org/obo/CHEBI_52255)) - -- [hydroxyapatite binding](http://purl.obolibrary.org/obo/GO_0046848) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_52255](http://purl.obolibrary.org/obo/CHEBI_52255) - - -### hyoglossus muscle `http://purl.obolibrary.org/obo/UBERON_0001572` -#### Removed -- [hyoglossus muscle](http://purl.obolibrary.org/obo/UBERON_0001572) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Hyoglossus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hyoglossus muscle](http://purl.obolibrary.org/obo/UBERON_0001572) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Hyoglossus.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hyoid bone `http://purl.obolibrary.org/obo/UBERON_0001685` -#### Removed -- [hyoid bone](http://purl.obolibrary.org/obo/UBERON_0001685) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1f/Gray186.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hyoid bone](http://purl.obolibrary.org/obo/UBERON_0001685) [UBPROP_0000008](http://purl.obolibrary.org/obo/UBPROP_0000008) "The hyoid bone is derived from the lower half of the second gill arch in fish, which separates the first gill slit from the spiracle. In many animals, it also incorporates elements of other gill arches, and has a correspondingly greater number of cornua. Amphibians and reptiles may have many cornua, while mammals (including humans) have two pairs, and birds only one. In birds, and some reptiles, the body of the hyoid is greatly extended forward, creating a solid bony support for the tongue. The howler monkey Alouatta has a pneumatized hyoid bone, one of the few cases of postcranial pneumatization of bones outside Saurischia." - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/548" - - - [source](http://www.geneontology.org/formats/oboInOwl#source) "WP" - -#### Added -- [hyoid bone](http://purl.obolibrary.org/obo/UBERON_0001685) [UBPROP_0000008](http://purl.obolibrary.org/obo/UBPROP_0000008) "The hyoid bone is derived from the lower half of the second gill arch in fish, which separates the first gill slit from the spiracle. In many animals, it also incorporates elements of other gill arches, and has a correspondingly greater number of cornua. Amphibians and reptiles may have many cornua, while mammals (including humans) have two pairs, and birds only one. In birds, and some reptiles, the body of the hyoid is greatly extended forward, creating a solid bony support for the tongue. The howler monkey Alouatta has a pneumatized hyoid bone, one of the few cases of postcranial pneumatization of bones outside Saurischia." - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/548" - - - [source](http://www.geneontology.org/formats/oboInOwl#source) "WP" - -- [hyoid bone](http://purl.obolibrary.org/obo/UBERON_0001685) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1f/Gray186.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hypodermis `http://purl.obolibrary.org/obo/UBERON_0002072` -#### Removed -- [hypodermis](http://purl.obolibrary.org/obo/UBERON_0002072) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hypodermis](http://purl.obolibrary.org/obo/UBERON_0002072) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hypoglossal nerve `http://purl.obolibrary.org/obo/UBERON_0001650` -#### Removed -- [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "12n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:820" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray794.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "12n" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:820" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray794.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hypoglossal nucleus `http://purl.obolibrary.org/obo/UBERON_0002871` -#### Removed -- [hypoglossal nucleus](http://purl.obolibrary.org/obo/UBERON_0002871) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hypoglossal nucleus](http://purl.obolibrary.org/obo/UBERON_0002871) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### hypothalamus `http://purl.obolibrary.org/obo/UBERON_0001898` -#### Removed -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Hy" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:734" - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/LocationOfHypothalamus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Hy" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:734" - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/LocationOfHypothalamus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001898) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ice binding `http://purl.obolibrary.org/obo/GO_0050825` -#### Removed -- [ice binding](http://purl.obolibrary.org/obo/GO_0050825) EquivalentTo [small molecule binding](http://purl.obolibrary.org/obo/GO_0036094) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - -- [ice binding](http://purl.obolibrary.org/obo/GO_0050825) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377) - -#### Added -- [ice binding](http://purl.obolibrary.org/obo/GO_0050825) EquivalentTo [small molecule binding](http://purl.obolibrary.org/obo/GO_0036094) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - -- [ice binding](http://purl.obolibrary.org/obo/GO_0050825) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377) - - -### id `http://www.geneontology.org/formats/oboInOwl#id` - -#### Added -- [id](http://www.geneontology.org/formats/oboInOwl#id) [label](http://www.w3.org/2000/01/rdf-schema#label) "id" - - -### ileocolic artery `http://purl.obolibrary.org/obo/UBERON_0001197` -#### Removed -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ileocolic vein `http://purl.obolibrary.org/obo/UBERON_0001219` -#### Removed -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ileum `http://purl.obolibrary.org/obo/UBERON_0002116` -#### Removed -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb" - -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb" - -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ileum](http://purl.obolibrary.org/obo/UBERON_0002116) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ilium `http://purl.obolibrary.org/obo/UBERON_0001273` -#### Removed -- [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" - -- [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" - -#### Added -- [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### immunoglobulin binding `http://purl.obolibrary.org/obo/GO_0019865` -#### Removed -- [immunoglobulin binding](http://purl.obolibrary.org/obo/GO_0019865) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [immunoglobulin complex](http://purl.obolibrary.org/obo/GO_0019814)) - -- [immunoglobulin binding](http://purl.obolibrary.org/obo/GO_0019865) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [immunoglobulin complex](http://purl.obolibrary.org/obo/GO_0019814) - -#### Added -- [immunoglobulin binding](http://purl.obolibrary.org/obo/GO_0019865) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [immunoglobulin complex](http://purl.obolibrary.org/obo/GO_0019814)) - -- [immunoglobulin binding](http://purl.obolibrary.org/obo/GO_0019865) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [immunoglobulin complex](http://purl.obolibrary.org/obo/GO_0019814) - - -### inferior mesenteric artery `http://purl.obolibrary.org/obo/UBERON_0001183` -#### Removed -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IMA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray538.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray538.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IMA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### inferior mesenteric vein `http://purl.obolibrary.org/obo/UBERON_0001215` -#### Removed -- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### inferior suprarenal artery `http://purl.obolibrary.org/obo/UBERON_0002056` -#### Removed -- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [inferior suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0002056) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### inferior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001311` -#### Removed -- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/1/13/Inferiorvesical.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/1/13/Inferiorvesical.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### inner cell mass `http://purl.obolibrary.org/obo/UBERON_0000087` -#### Removed -- [inner cell mass](http://purl.obolibrary.org/obo/UBERON_0000087) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [inner cell mass](http://purl.obolibrary.org/obo/UBERON_0000087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### inner limiting layer of retina `http://purl.obolibrary.org/obo/UBERON_0001794` -#### Removed -- [inner limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001794) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "inner limiting membranes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001029" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [inner limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001794) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ILM" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001029" - -#### Added -- [inner limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001794) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "inner limiting membranes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001029" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [inner limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001794) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "ILM" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001029" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### inner plexiform layer of retina `http://purl.obolibrary.org/obo/UBERON_0001795` -#### Removed -- [inner plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001795) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inner plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001795) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "IPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [inner plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001795) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [inner plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001795) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "IPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### innominate bone `http://purl.obolibrary.org/obo/UBERON_0001272` -#### Removed -- [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### insulin binding `http://purl.obolibrary.org/obo/GO_0043559` -#### Removed -- [insulin binding](http://purl.obolibrary.org/obo/GO_0043559) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [insulin binding](http://purl.obolibrary.org/obo/GO_0043559) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - -#### Added -- [insulin binding](http://purl.obolibrary.org/obo/GO_0043559) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [insulin binding](http://purl.obolibrary.org/obo/GO_0043559) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - - -### insulin receptor activity `http://purl.obolibrary.org/obo/GO_0005009` -#### Removed -- [insulin receptor activity](http://purl.obolibrary.org/obo/GO_0005009) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [insulin receptor activity](http://purl.obolibrary.org/obo/GO_0005009) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - -#### Added -- [insulin receptor activity](http://purl.obolibrary.org/obo/GO_0005009) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [insulin receptor activity](http://purl.obolibrary.org/obo/GO_0005009) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - - -### integument `http://purl.obolibrary.org/obo/UBERON_0002199` - -#### Added -- [integument](http://purl.obolibrary.org/obo/UBERON_0002199) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [integument](http://purl.obolibrary.org/obo/UBERON_0002199) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### integumental system `http://purl.obolibrary.org/obo/UBERON_0002416` - -#### Added -- [integumental system](http://purl.obolibrary.org/obo/UBERON_0002416) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [integumental system](http://purl.obolibrary.org/obo/UBERON_0002416) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### interatrial septum `http://purl.obolibrary.org/obo/UBERON_0002085` -#### Removed -- [interatrial septum](http://purl.obolibrary.org/obo/UBERON_0002085) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [interatrial septum](http://purl.obolibrary.org/obo/UBERON_0002085) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intercarpal joint `http://purl.obolibrary.org/obo/UBERON_0011132` -#### Removed -- [intercarpal joint](http://purl.obolibrary.org/obo/UBERON_0011132) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/37/Gray336.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intercarpal joint](http://purl.obolibrary.org/obo/UBERON_0011132) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/37/Gray336.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intercostal nerve `http://purl.obolibrary.org/obo/UBERON_0003727` -#### Removed -- [intercostal nerve](http://purl.obolibrary.org/obo/UBERON_0003727) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray819.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intercostal nerve](http://purl.obolibrary.org/obo/UBERON_0003727) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray819.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### interlobar artery `http://purl.obolibrary.org/obo/UBERON_0009885` -#### Removed -- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arteriae interlobares renis" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arteriae interlobares renis" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### interlobar vein `http://purl.obolibrary.org/obo/UBERON_0009887` -#### Removed -- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "venae interlobares renis" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -#### Added -- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "venae interlobares renis" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### interlobular artery `http://purl.obolibrary.org/obo/UBERON_0004723` -#### Removed -- [interlobular artery](http://purl.obolibrary.org/obo/UBERON_0004723) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [interlobular artery](http://purl.obolibrary.org/obo/UBERON_0004723) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### interlobular duct of salivary gland `http://purl.obolibrary.org/obo/UBERON_0035053` - -#### Added -- [interlobular duct of salivary gland](http://purl.obolibrary.org/obo/UBERON_0035053) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006341" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### intermediate filament binding `http://purl.obolibrary.org/obo/GO_0019215` -#### Removed -- [intermediate filament binding](http://purl.obolibrary.org/obo/GO_0019215) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [intermediate filament](http://purl.obolibrary.org/obo/GO_0005882)) - -- [intermediate filament binding](http://purl.obolibrary.org/obo/GO_0019215) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [intermediate filament](http://purl.obolibrary.org/obo/GO_0005882) - -#### Added -- [intermediate filament binding](http://purl.obolibrary.org/obo/GO_0019215) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [intermediate filament](http://purl.obolibrary.org/obo/GO_0005882)) - -- [intermediate filament binding](http://purl.obolibrary.org/obo/GO_0019215) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [intermediate filament](http://purl.obolibrary.org/obo/GO_0005882) - - -### intermediate hypothalamic region `http://purl.obolibrary.org/obo/UBERON_0002555` -#### Removed -- [intermediate hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002555) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1015" - -#### Added -- [intermediate hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002555) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "IHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1015" - - -### intermediate mesoderm `http://purl.obolibrary.org/obo/UBERON_0003064` -#### Removed -- [intermediate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003064) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intermediate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003064) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intermetatarsal joint `http://purl.obolibrary.org/obo/UBERON_0011133` -#### Removed -- [intermetatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011133) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intermetatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011133) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal carotid artery `http://purl.obolibrary.org/obo/UBERON_0001532` -#### Removed -- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ICA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray513.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ICA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray513.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal ear `http://purl.obolibrary.org/obo/UBERON_0001846` -#### Removed -- [internal ear](http://purl.obolibrary.org/obo/UBERON_0001846) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal ear](http://purl.obolibrary.org/obo/UBERON_0001846) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal iliac artery `http://purl.obolibrary.org/obo/UBERON_0001309` -#### Removed -- [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d3/Iliac_artery_bifurcation.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal iliac artery](http://purl.obolibrary.org/obo/UBERON_0001309) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d3/Iliac_artery_bifurcation.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal iliac vein `http://purl.obolibrary.org/obo/UBERON_0001317` -#### Removed -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Internaliliacv.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Internaliliacv.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal jugular vein `http://purl.obolibrary.org/obo/UBERON_0001586` -#### Removed -- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray562.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray562.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal naris `http://purl.obolibrary.org/obo/UBERON_0010425` -#### Removed -- [internal naris](http://purl.obolibrary.org/obo/UBERON_0010425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "choanae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [internal naris](http://purl.obolibrary.org/obo/UBERON_0010425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "internal nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [internal naris](http://purl.obolibrary.org/obo/UBERON_0010425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "choanae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [internal naris](http://purl.obolibrary.org/obo/UBERON_0010425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "internal nares" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### internal pillar cell of cochlea `http://purl.obolibrary.org/obo/CL_0002163` -#### Removed -- [internal pillar cell of cochlea](http://purl.obolibrary.org/obo/CL_0002163) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:75722" - - - -### internal pudendal vein `http://purl.obolibrary.org/obo/UBERON_0018252` -#### Removed -- [internal pudendal vein](http://purl.obolibrary.org/obo/UBERON_0018252) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [internal pudendal vein](http://purl.obolibrary.org/obo/UBERON_0018252) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [internal pudendal vein](http://purl.obolibrary.org/obo/UBERON_0018252) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [internal pudendal vein](http://purl.obolibrary.org/obo/UBERON_0018252) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### internal thoracic artery `http://purl.obolibrary.org/obo/UBERON_0002456` -#### Removed -- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray522.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray522.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intersomitic artery `http://purl.obolibrary.org/obo/UBERON_0002457` -#### Removed -- [intersomitic artery](http://purl.obolibrary.org/obo/UBERON_0002457) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "intersegmental arteries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001061" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [intersomitic artery](http://purl.obolibrary.org/obo/UBERON_0002457) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "intersegmental arteries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001061" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### intersomitic vessel `http://purl.obolibrary.org/obo/UBERON_0014907` -#### Removed -- [intersomitic vessel](http://purl.obolibrary.org/obo/UBERON_0014907) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intersomitic vessels" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001285" - -- [intersomitic vessel](http://purl.obolibrary.org/obo/UBERON_0014907) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intersegmental vessels" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001285" - -#### Added -- [intersomitic vessel](http://purl.obolibrary.org/obo/UBERON_0014907) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intersegmental vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001285" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [intersomitic vessel](http://purl.obolibrary.org/obo/UBERON_0014907) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intersomitic vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001285" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### interstitial cell `http://purl.obolibrary.org/obo/CL_4030031` -#### Removed -- [interstitial cell](http://purl.obolibrary.org/obo/CL_4030031) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### interstitial cell of thymus `http://purl.obolibrary.org/obo/CL_4030003` -#### Removed -- [interstitial cell of thymus](http://purl.obolibrary.org/obo/CL_4030003) [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0002-1773-2692" - - - -### intertarsal joint `http://purl.obolibrary.org/obo/UBERON_0008447` -#### Removed -- [intertarsal joint](http://purl.obolibrary.org/obo/UBERON_0008447) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray360.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intertarsal joint](http://purl.obolibrary.org/obo/UBERON_0008447) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray360.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### interventricular septum `http://purl.obolibrary.org/obo/UBERON_0002094` -#### Removed -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -#### Added -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [interventricular septum](http://purl.obolibrary.org/obo/UBERON_0002094) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intervertebral disk `http://purl.obolibrary.org/obo/UBERON_0001066` -#### Removed -- [intervertebral disk](http://purl.obolibrary.org/obo/UBERON_0001066) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray301.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [intervertebral disk](http://purl.obolibrary.org/obo/UBERON_0001066) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/92/Gray301.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### intestinal villus `http://purl.obolibrary.org/obo/UBERON_0001213` -#### Removed -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intestinal villi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005125" - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "enteric villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HP:0011473" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "villi intestinales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "enteric villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HP:0011473" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "intestinal villi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005125" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [intestinal villus](http://purl.obolibrary.org/obo/UBERON_0001213) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "villi intestinales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### intralobular bile duct `http://purl.obolibrary.org/obo/UBERON_0001282` -#### Removed -- [intralobular bile duct](http://purl.obolibrary.org/obo/UBERON_0001282) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "canals of Hering" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Canals_of_Hering" - -#### Added -- [intralobular bile duct](http://purl.obolibrary.org/obo/UBERON_0001282) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "canals of Hering" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Canals_of_Hering" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### intramembranous bone `http://purl.obolibrary.org/obo/UBERON_0002514` -#### Removed -- [intramembranous bone](http://purl.obolibrary.org/obo/UBERON_0002514) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "intramembranous bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001635" - -#### Added -- [intramembranous bone](http://purl.obolibrary.org/obo/UBERON_0002514) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "intramembranous bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001635" - - -### ionotropic glutamate receptor activity `http://purl.obolibrary.org/obo/GO_0004970` -#### Removed -- [ionotropic glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0004970) [label](http://www.w3.org/2000/01/rdf-schema#label) "ionotropic glutamate receptor activity" - -#### Added -- [ionotropic glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0004970) [label](http://www.w3.org/2000/01/rdf-schema#label) "glutamate-gated receptor activity" - -- [ionotropic glutamate receptor activity](http://purl.obolibrary.org/obo/GO_0004970) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ionotropic glutamate receptor activity" - - -### iris `http://purl.obolibrary.org/obo/UBERON_0001769` -#### Removed -- [iris](http://purl.obolibrary.org/obo/UBERON_0001769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "irises" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000101" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [iris](http://purl.obolibrary.org/obo/UBERON_0001769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "irides" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [iris](http://purl.obolibrary.org/obo/UBERON_0001769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "irides" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [iris](http://purl.obolibrary.org/obo/UBERON_0001769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "irises" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000101" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### iris stroma `http://purl.obolibrary.org/obo/UBERON_0001779` -#### Removed -- [iris stroma](http://purl.obolibrary.org/obo/UBERON_0001779) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [iris stroma](http://purl.obolibrary.org/obo/UBERON_0001779) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### iron ion binding `http://purl.obolibrary.org/obo/GO_0005506` -#### Removed -- [iron ion binding](http://purl.obolibrary.org/obo/GO_0005506) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [iron ion binding](http://purl.obolibrary.org/obo/GO_0005506) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - -#### Added -- [iron ion binding](http://purl.obolibrary.org/obo/GO_0005506) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [iron ion binding](http://purl.obolibrary.org/obo/GO_0005506) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - - -### ischium `http://purl.obolibrary.org/obo/UBERON_0001274` -#### Removed -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" - -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" - -#### Added -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ischium](http://purl.obolibrary.org/obo/UBERON_0001274) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### island of Calleja `http://purl.obolibrary.org/obo/UBERON_0001881` -#### Removed -- [island of Calleja](http://purl.obolibrary.org/obo/UBERON_0001881) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Islands_of_Calleja_Rat.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [island of Calleja](http://purl.obolibrary.org/obo/UBERON_0001881) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Islands_of_Calleja_Rat.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### islet of Langerhans `http://purl.obolibrary.org/obo/UBERON_0000006` -#### Removed -- [islet of Langerhans](http://purl.obolibrary.org/obo/UBERON_0000006) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [islet of Langerhans](http://purl.obolibrary.org/obo/UBERON_0000006) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### jaw muscle `http://purl.obolibrary.org/obo/UBERON_0011648` -#### Removed -- [jaw muscle](http://purl.obolibrary.org/obo/UBERON_0011648) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mandibular muscles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000236" - -#### Added -- [jaw muscle](http://purl.obolibrary.org/obo/UBERON_0011648) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mandibular muscles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000236" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### jejunal vein `http://purl.obolibrary.org/obo/UBERON_0001216` -#### Removed -- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### jejunum `http://purl.obolibrary.org/obo/UBERON_0002115` -#### Removed -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb" - -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb" - -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### jugular foramen `http://purl.obolibrary.org/obo/UBERON_0005456` -#### Removed -- [jugular foramen](http://purl.obolibrary.org/obo/UBERON_0005456) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Foramenjugulare.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [jugular foramen](http://purl.obolibrary.org/obo/UBERON_0005456) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fa/Foramenjugulare.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### jugular vein `http://purl.obolibrary.org/obo/UBERON_0004711` -#### Removed -- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### juvenile hormone binding `http://purl.obolibrary.org/obo/GO_0005500` -#### Removed -- [juvenile hormone binding](http://purl.obolibrary.org/obo/GO_0005500) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24943](http://purl.obolibrary.org/obo/CHEBI_24943)) - -- [juvenile hormone binding](http://purl.obolibrary.org/obo/GO_0005500) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24943](http://purl.obolibrary.org/obo/CHEBI_24943) - -#### Added -- [juvenile hormone binding](http://purl.obolibrary.org/obo/GO_0005500) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24943](http://purl.obolibrary.org/obo/CHEBI_24943)) - -- [juvenile hormone binding](http://purl.obolibrary.org/obo/GO_0005500) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24943](http://purl.obolibrary.org/obo/CHEBI_24943) - - -### juxtaglomerular complex cell `http://purl.obolibrary.org/obo/CL_1000618` - -#### Added -- [juxtaglomerular complex cell](http://purl.obolibrary.org/obo/CL_1000618) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### keratin filament binding `http://purl.obolibrary.org/obo/GO_1990254` -#### Removed -- [keratin filament binding](http://purl.obolibrary.org/obo/GO_1990254) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [keratin filament](http://purl.obolibrary.org/obo/GO_0045095)) - -- [keratin filament binding](http://purl.obolibrary.org/obo/GO_1990254) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [keratin filament](http://purl.obolibrary.org/obo/GO_0045095) - -#### Added -- [keratin filament binding](http://purl.obolibrary.org/obo/GO_1990254) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [keratin filament](http://purl.obolibrary.org/obo/GO_0045095)) - -- [keratin filament binding](http://purl.obolibrary.org/obo/GO_1990254) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [keratin filament](http://purl.obolibrary.org/obo/GO_0045095) - - -### keratinocyte activation `http://purl.obolibrary.org/obo/GO_0032980` -#### Removed -- [keratinocyte activation](http://purl.obolibrary.org/obo/GO_0032980) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [keratinocyte](http://purl.obolibrary.org/obo/CL_0000312)) - -- [keratinocyte activation](http://purl.obolibrary.org/obo/GO_0032980) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [keratinocyte](http://purl.obolibrary.org/obo/CL_0000312) - -#### Added -- [keratinocyte activation](http://purl.obolibrary.org/obo/GO_0032980) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [keratinocyte](http://purl.obolibrary.org/obo/CL_0000312)) - -- [keratinocyte activation](http://purl.obolibrary.org/obo/GO_0032980) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [keratinocyte](http://purl.obolibrary.org/obo/CL_0000312) - - -### kidney arcuate artery `http://purl.obolibrary.org/obo/UBERON_0001552` -#### Removed -- [kidney arcuate artery](http://purl.obolibrary.org/obo/UBERON_0001552) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [kidney arcuate artery](http://purl.obolibrary.org/obo/UBERON_0001552) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### kidney arcuate vein `http://purl.obolibrary.org/obo/UBERON_0004719` -#### Removed -- [kidney arcuate vein](http://purl.obolibrary.org/obo/UBERON_0004719) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [kidney arcuate vein](http://purl.obolibrary.org/obo/UBERON_0004719) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### kidney arterial blood vessel cell `http://purl.obolibrary.org/obo/CL_1000891` - -#### Added -- [kidney arterial blood vessel cell](http://purl.obolibrary.org/obo/CL_1000891) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney capillary endothelial cell `http://purl.obolibrary.org/obo/CL_1000892` - -#### Added -- [kidney capillary endothelial cell](http://purl.obolibrary.org/obo/CL_1000892) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney capsule `http://purl.obolibrary.org/obo/UBERON_0002015` -#### Removed -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb" - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb" - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney capsule](http://purl.obolibrary.org/obo/UBERON_0002015) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### kidney collecting duct alpha-intercalated cell `http://purl.obolibrary.org/obo/CL_4030015` -#### Removed -- [kidney collecting duct alpha-intercalated cell](http://purl.obolibrary.org/obo/CL_4030015) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney collecting duct beta-intercalated cell `http://purl.obolibrary.org/obo/CL_4030005` -#### Removed -- [kidney collecting duct beta-intercalated cell](http://purl.obolibrary.org/obo/CL_4030005) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney collecting duct epithelial cell `http://purl.obolibrary.org/obo/CL_1000454` -#### Removed -- [kidney collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000454) EquivalentTo [non-branched duct epithelial cell](http://purl.obolibrary.org/obo/CL_0000072) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [collecting duct of renal tubule](http://purl.obolibrary.org/obo/UBERON_0001232)) - -#### Added -- [kidney collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000454) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - -- [kidney collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000454) EquivalentTo [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [collecting duct of renal tubule](http://purl.obolibrary.org/obo/UBERON_0001232)) - - -### kidney connecting tubule alpha-intercalated cell `http://purl.obolibrary.org/obo/CL_4030020` -#### Removed -- [kidney connecting tubule alpha-intercalated cell](http://purl.obolibrary.org/obo/CL_4030020) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney connecting tubule beta-intercalated cell `http://purl.obolibrary.org/obo/CL_4030021` -#### Removed -- [kidney connecting tubule beta-intercalated cell](http://purl.obolibrary.org/obo/CL_4030021) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney connecting tubule epithelial cell `http://purl.obolibrary.org/obo/CL_1000768` - -#### Added -- [kidney connecting tubule epithelial cell](http://purl.obolibrary.org/obo/CL_1000768) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney connecting tubule intercalated cell `http://purl.obolibrary.org/obo/CL_4030019` -#### Removed -- [kidney connecting tubule intercalated cell](http://purl.obolibrary.org/obo/CL_4030019) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney connecting tubule principal cell `http://purl.obolibrary.org/obo/CL_4030018` -#### Removed -- [kidney connecting tubule principal cell](http://purl.obolibrary.org/obo/CL_4030018) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney corpuscule cell `http://purl.obolibrary.org/obo/CL_1000612` - -#### Added -- [kidney corpuscule cell](http://purl.obolibrary.org/obo/CL_1000612) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney cortex collecting duct epithelial cell `http://purl.obolibrary.org/obo/CL_1000549` -#### Removed -- [kidney cortex collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000549) SubClassOf [kidney collecting duct cell](http://purl.obolibrary.org/obo/CL_1001225) - -- [kidney cortex collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000549) SubClassOf [epithelial cell of nephron](http://purl.obolibrary.org/obo/CL_1000449) - -#### Added -- [kidney cortex collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000549) SubClassOf [kidney collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000454) - - -### kidney distal convoluted tubule epithelial cell `http://purl.obolibrary.org/obo/CL_1000849` - -#### Added -- [kidney distal convoluted tubule epithelial cell](http://purl.obolibrary.org/obo/CL_1000849) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney interstitial cell `http://purl.obolibrary.org/obo/CL_1000500` - -#### Added -- [kidney interstitial cell](http://purl.obolibrary.org/obo/CL_1000500) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney loop of Henle ascending limb epithelial cell `http://purl.obolibrary.org/obo/CL_1001016` - -#### Added -- [kidney loop of Henle ascending limb epithelial cell](http://purl.obolibrary.org/obo/CL_1001016) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney loop of Henle descending limb epithelial cell `http://purl.obolibrary.org/obo/CL_1001021` - -#### Added -- [kidney loop of Henle descending limb epithelial cell](http://purl.obolibrary.org/obo/CL_1001021) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney loop of Henle long descending thin limb inner medulla epithelial cell `http://purl.obolibrary.org/obo/CL_4030014` -#### Removed -- [kidney loop of Henle long descending thin limb inner medulla epithelial cell](http://purl.obolibrary.org/obo/CL_4030014) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney loop of Henle long descending thin limb outer medulla epithelial cell `http://purl.obolibrary.org/obo/CL_4030013` -#### Removed -- [kidney loop of Henle long descending thin limb outer medulla epithelial cell](http://purl.obolibrary.org/obo/CL_4030013) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney loop of Henle short descending thin limb epithelial cell `http://purl.obolibrary.org/obo/CL_4030012` -#### Removed -- [kidney loop of Henle short descending thin limb epithelial cell](http://purl.obolibrary.org/obo/CL_4030012) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### kidney medulla collecting duct epithelial cell `http://purl.obolibrary.org/obo/CL_1000546` -#### Removed -- [kidney medulla collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000546) SubClassOf [epithelial cell of nephron](http://purl.obolibrary.org/obo/CL_1000449) - -- [kidney medulla collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000546) SubClassOf [kidney collecting duct cell](http://purl.obolibrary.org/obo/CL_1001225) - -#### Added -- [kidney medulla collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000546) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - -- [kidney medulla collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000546) SubClassOf [kidney collecting duct epithelial cell](http://purl.obolibrary.org/obo/CL_1000454) - - -### kidney papillary duct principal epithelial cell `http://purl.obolibrary.org/obo/CL_1000550` - -#### Added -- [kidney papillary duct principal epithelial cell](http://purl.obolibrary.org/obo/CL_1000550) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney pelvis cell `http://purl.obolibrary.org/obo/CL_1000505` - -#### Added -- [kidney pelvis cell](http://purl.obolibrary.org/obo/CL_1000505) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney pyramid `http://purl.obolibrary.org/obo/UBERON_0004200` -#### Removed -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb" - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb" - -#### Added -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [kidney pyramid](http://purl.obolibrary.org/obo/UBERON_0004200) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### kidney tubule cell `http://purl.obolibrary.org/obo/CL_1000507` - -#### Added -- [kidney tubule cell](http://purl.obolibrary.org/obo/CL_1000507) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney venous blood vessel cell `http://purl.obolibrary.org/obo/CL_1000893` - -#### Added -- [kidney venous blood vessel cell](http://purl.obolibrary.org/obo/CL_1000893) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - - -### kidney_upper_slim `http://purl.obolibrary.org/obo/cl#kidney_upper_slim` - -#### Added -- [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) [date](http://purl.org/dc/terms/date) "2023-11-22T11:18:57Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - -- [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "a subset of general classes related to specific cell types in the kidney" - -- [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) [label](http://www.w3.org/2000/01/rdf-schema#label) "kidney_upper_slim" - -- AnnotationProperty: [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) - -- [kidney_upper_slim](http://purl.obolibrary.org/obo/cl#kidney_upper_slim) SubPropertyOf: [subset_property](http://www.geneontology.org/formats/oboInOwl#SubsetProperty) - - -### knee `http://purl.obolibrary.org/obo/UBERON_0001465` -#### Removed -- [knee](http://purl.obolibrary.org/obo/UBERON_0001465) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8d/Male_Knee_by_David_Shankbone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [knee](http://purl.obolibrary.org/obo/UBERON_0001465) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8d/Male_Knee_by_David_Shankbone.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### knee joint `http://purl.obolibrary.org/obo/UBERON_0001485` -#### Removed -- [knee joint](http://purl.obolibrary.org/obo/UBERON_0001485) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Knee.agr.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [knee joint](http://purl.obolibrary.org/obo/UBERON_0001485) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Knee.agr.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lacrimal apparatus `http://purl.obolibrary.org/obo/UBERON_0001750` -#### Removed -- [lacrimal apparatus](http://purl.obolibrary.org/obo/UBERON_0001750) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lacrimal apparatus](http://purl.obolibrary.org/obo/UBERON_0001750) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lacrimal artery `http://purl.obolibrary.org/obo/UBERON_0001622` -#### Removed -- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lacrimal gland `http://purl.obolibrary.org/obo/UBERON_0001817` -#### Removed -- [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lacrimal punctum `http://purl.obolibrary.org/obo/UBERON_0010284` -#### Removed -- [lacrimal punctum](http://purl.obolibrary.org/obo/UBERON_0010284) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lacrimal puncta" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lacrimal_punctum" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [lacrimal punctum](http://purl.obolibrary.org/obo/UBERON_0010284) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray895.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lacrimal punctum](http://purl.obolibrary.org/obo/UBERON_0010284) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lacrimal puncta" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lacrimal_punctum" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [lacrimal punctum](http://purl.obolibrary.org/obo/UBERON_0010284) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray895.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lacrimal sac `http://purl.obolibrary.org/obo/UBERON_0001351` -#### Removed -- [lacrimal sac](http://purl.obolibrary.org/obo/UBERON_0001351) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lacrimal sac](http://purl.obolibrary.org/obo/UBERON_0001351) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lactoferrin receptor activity `http://purl.obolibrary.org/obo/GO_0033568` -#### Removed -- [lactoferrin receptor activity](http://purl.obolibrary.org/obo/GO_0033568) EquivalentTo [cargo receptor activity](http://purl.obolibrary.org/obo/GO_0038024) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978)) - -- [lactoferrin receptor activity](http://purl.obolibrary.org/obo/GO_0033568) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978) - -#### Added -- [lactoferrin receptor activity](http://purl.obolibrary.org/obo/GO_0033568) EquivalentTo [cargo receptor activity](http://purl.obolibrary.org/obo/GO_0038024) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978)) - -- [lactoferrin receptor activity](http://purl.obolibrary.org/obo/GO_0033568) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978) - - -### lactoferrin transmembrane transporter activity `http://purl.obolibrary.org/obo/GO_0033569` -#### Removed -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) EquivalentTo [transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0022857) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978)) - -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) SubClassOf [transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0022857) - -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978) - -#### Added -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) EquivalentTo [transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0022857) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978)) - -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lactotransferrin](http://purl.obolibrary.org/obo/PR_000009978) - -- [lactoferrin transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0033569) SubClassOf [protein transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0008320) - - -### lamina `http://purl.obolibrary.org/obo/UBERON_0000957` -#### Removed -- [lamina](http://purl.obolibrary.org/obo/UBERON_0000957) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/80/Laminaarcusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lamina](http://purl.obolibrary.org/obo/UBERON_0000957) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/80/Laminaarcusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lamina of spiral limbus `http://purl.obolibrary.org/obo/UBERON_0002276` -#### Removed -- [lamina of spiral limbus](http://purl.obolibrary.org/obo/UBERON_0002276) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray930.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lamina of spiral limbus](http://purl.obolibrary.org/obo/UBERON_0002276) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray930.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lamina propria `http://purl.obolibrary.org/obo/UBERON_0000030` -#### Removed -- [lamina propria](http://purl.obolibrary.org/obo/UBERON_0000030) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/f/fb/GI_Organization.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lamina propria](http://purl.obolibrary.org/obo/UBERON_0000030) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/f/fb/GI_Organization.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### large intestine `http://purl.obolibrary.org/obo/UBERON_0000059` -#### Removed -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/SBU_F_Intestine_Large.glb" - -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -#### Added -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### laryngeal cartilage `http://purl.obolibrary.org/obo/UBERON_0001739` -#### Removed -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-larynx.glb" - -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cartilagines laryngeales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-larynx.glb" - -#### Added -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-larynx.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cartilagines laryngeales" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [laryngeal cartilage](http://purl.obolibrary.org/obo/UBERON_0001739) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-larynx.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### larynx `http://purl.obolibrary.org/obo/UBERON_0001737` -#### Removed -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8a/Larynx_external_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-larynx.glb" - -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-larynx.glb" - -#### Added -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-larynx.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8a/Larynx_external_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [larynx](http://purl.obolibrary.org/obo/UBERON_0001737) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-larynx.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lateral geniculate body `http://purl.obolibrary.org/obo/UBERON_0001926` -#### Removed -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "LGN" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1662" - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LGB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004367" - -#### Added -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LGB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004367" - -- [lateral geniculate body](http://purl.obolibrary.org/obo/UBERON_0001926) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "LGN" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1662" - - -### lateral line `http://purl.obolibrary.org/obo/UBERON_0010202` -#### Removed -- [lateral line](http://purl.obolibrary.org/obo/UBERON_0010202) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral lines" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001469" - -#### Added -- [lateral line](http://purl.obolibrary.org/obo/UBERON_0010202) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral lines" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001469" - - -### lateral line ganglion `http://purl.obolibrary.org/obo/UBERON_2000120` -#### Removed -- [lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2000120) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LLG" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000120" - -- [lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2000120) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000120" - -#### Added -- [lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2000120) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LLG" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000120" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [lateral line ganglion](http://purl.obolibrary.org/obo/UBERON_2000120) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000120" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### lateral line nerve `http://purl.obolibrary.org/obo/UBERON_0008906` -#### Removed -- [lateral line nerve](http://purl.obolibrary.org/obo/UBERON_0008906) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line nerves" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001479" - -#### Added -- [lateral line nerve](http://purl.obolibrary.org/obo/UBERON_0008906) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line nerves" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001479" - - -### lateral line placode `http://purl.obolibrary.org/obo/UBERON_0009128` -#### Removed -- [lateral line placode](http://purl.obolibrary.org/obo/UBERON_0009128) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lateral line placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000440" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [lateral line placode](http://purl.obolibrary.org/obo/UBERON_0009128) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lateral line placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000440" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### lateral line primordium `http://purl.obolibrary.org/obo/UBERON_2000228` -#### Removed -- [lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2000228) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000228" - -#### Added -- [lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2000228) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral line primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000228" - - -### lateral lingual swelling `http://purl.obolibrary.org/obo/UBERON_0006757` -#### Removed -- [lateral lingual swelling](http://purl.obolibrary.org/obo/UBERON_0006757) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lateral lingual swelling](http://purl.obolibrary.org/obo/UBERON_0006757) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lateral nasal prominence `http://purl.obolibrary.org/obo/UBERON_0004067` -#### Removed -- [lateral nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004067) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lateral nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004067) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lateral olfactory stria `http://purl.obolibrary.org/obo/UBERON_0001888` -#### Removed -- [lateral olfactory stria](http://purl.obolibrary.org/obo/UBERON_0001888) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lateral olfactory stria](http://purl.obolibrary.org/obo/UBERON_0001888) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [lateral olfactory stria](http://purl.obolibrary.org/obo/UBERON_0001888) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "LOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [lateral olfactory stria](http://purl.obolibrary.org/obo/UBERON_0001888) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lateral plate mesoderm `http://purl.obolibrary.org/obo/UBERON_0003081` -#### Removed -- [lateral plate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003081) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lateral plate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LPM" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000121" - -#### Added -- [lateral plate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003081) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LPM" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000121" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [lateral plate mesoderm](http://purl.obolibrary.org/obo/UBERON_0003081) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### latissimus dorsi muscle `http://purl.obolibrary.org/obo/UBERON_0001112` -#### Removed -- [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "latissimi dorsi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "latissimi dorsi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### layer of hippocampus `http://purl.obolibrary.org/obo/UBERON_0002305` -#### Removed -- [layer of hippocampus](http://purl.obolibrary.org/obo/UBERON_0002305) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - check NIF xref" - -#### Added -- [layer of hippocampus](http://purl.obolibrary.org/obo/UBERON_0002305) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - check NIF xref" - - -### left bundle branch `http://purl.obolibrary.org/obo/UBERON_0005986` -#### Removed -- [left bundle branch](http://purl.obolibrary.org/obo/UBERON_0005986) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LBB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [left bundle branch](http://purl.obolibrary.org/obo/UBERON_0005986) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LBB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### left cardiac atrium `http://purl.obolibrary.org/obo/UBERON_0002079` -#### Removed -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002079) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left cerebral hemisphere `http://purl.obolibrary.org/obo/UBERON_0002812` -#### Removed -- [left cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002812) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [left cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002812) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -#### Added -- [left cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002812) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002812) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left common carotid artery plus branches `http://purl.obolibrary.org/obo/UBERON_0001536` -#### Removed -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001536) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left eye `http://purl.obolibrary.org/obo/UBERON_0004548` -#### Removed -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" - -#### Added -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left eye](http://purl.obolibrary.org/obo/UBERON_0004548) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left kidney `http://purl.obolibrary.org/obo/UBERON_0004538` -#### Removed -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Kidney_Left.glb" - -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb" - -#### Added -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Kidney_Left.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left lobe of liver `http://purl.obolibrary.org/obo/UBERON_0001115` -#### Removed -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb" - -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb" - -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left lung `http://purl.obolibrary.org/obo/UBERON_0002168` -#### Removed -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dd/Gray973.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dd/Gray973.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left nipple `http://purl.obolibrary.org/obo/UBERON_0013772` -#### Removed -- [left nipple](http://purl.obolibrary.org/obo/UBERON_0013772) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-l.glb" - -#### Added -- [left nipple](http://purl.obolibrary.org/obo/UBERON_0013772) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0001652` -#### Removed -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left putamen `http://purl.obolibrary.org/obo/UBERON_0008884` -#### Removed -- [left putamen](http://purl.obolibrary.org/obo/UBERON_0008884) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [left putamen](http://purl.obolibrary.org/obo/UBERON_0008884) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -#### Added -- [left putamen](http://purl.obolibrary.org/obo/UBERON_0008884) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left putamen](http://purl.obolibrary.org/obo/UBERON_0008884) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left recurrent laryngeal nerve `http://purl.obolibrary.org/obo/UBERON_0011766` -#### Removed -- [left recurrent laryngeal nerve](http://purl.obolibrary.org/obo/UBERON_0011766) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/64/Recurrent_laryngeal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left recurrent laryngeal nerve](http://purl.obolibrary.org/obo/UBERON_0011766) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/64/Recurrent_laryngeal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left renal artery `http://purl.obolibrary.org/obo/UBERON_0001186` -#### Removed -- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left renal vein `http://purl.obolibrary.org/obo/UBERON_0001142` -#### Removed -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left subclavian artery `http://purl.obolibrary.org/obo/UBERON_0001584` -#### Removed -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001584) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left thymus lobe `http://purl.obolibrary.org/obo/UBERON_0005457` -#### Removed -- [left thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005457) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb" - -- [left thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005457) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb" - -#### Added -- [left thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005457) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005457) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left ureter `http://purl.obolibrary.org/obo/UBERON_0001223` -#### Removed -- [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Ureter_L.glb" - -- [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_L.glb" - -#### Added -- [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Ureter_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### left uterine tube `http://purl.obolibrary.org/obo/UBERON_0001303` -#### Removed -- [left uterine tube](http://purl.obolibrary.org/obo/UBERON_0001303) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Fallopian_Tube_L.glb" - -#### Added -- [left uterine tube](http://purl.obolibrary.org/obo/UBERON_0001303) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Fallopian_Tube_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lens of camera-type eye `http://purl.obolibrary.org/obo/UBERON_0000965` -#### Removed -- [lens of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000965) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lenses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000035" - -#### Added -- [lens of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000965) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lenses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000035" - - -### lens placode `http://purl.obolibrary.org/obo/UBERON_0003073` -#### Removed -- [lens placode](http://purl.obolibrary.org/obo/UBERON_0003073) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lens placode](http://purl.obolibrary.org/obo/UBERON_0003073) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lens placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000122" - -#### Added -- [lens placode](http://purl.obolibrary.org/obo/UBERON_0003073) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lens placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000122" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [lens placode](http://purl.obolibrary.org/obo/UBERON_0003073) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### leptomeninx `http://purl.obolibrary.org/obo/UBERON_0000391` -#### Removed -- [leptomeninx](http://purl.obolibrary.org/obo/UBERON_0000391) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "leptomeninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NLXANAT:090207" - -#### Added -- [leptomeninx](http://purl.obolibrary.org/obo/UBERON_0000391) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "leptomeninges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NLXANAT:090207" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### leukocyte activation `http://purl.obolibrary.org/obo/GO_0045321` -#### Removed -- [leukocyte activation](http://purl.obolibrary.org/obo/GO_0045321) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [leukocyte](http://purl.obolibrary.org/obo/CL_0000738)) - -- [leukocyte activation](http://purl.obolibrary.org/obo/GO_0045321) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [leukocyte](http://purl.obolibrary.org/obo/CL_0000738) - -#### Added -- [leukocyte activation](http://purl.obolibrary.org/obo/GO_0045321) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [leukocyte](http://purl.obolibrary.org/obo/CL_0000738)) - -- [leukocyte activation](http://purl.obolibrary.org/obo/GO_0045321) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [leukocyte](http://purl.obolibrary.org/obo/CL_0000738) - - -### leukocyte cell-cell adhesion `http://purl.obolibrary.org/obo/GO_0007159` -#### Removed -- [leukocyte cell-cell adhesion](http://purl.obolibrary.org/obo/GO_0007159) [never_in_taxon](http://purl.obolibrary.org/obo/RO_0002161) [Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090) - -- [leukocyte cell-cell adhesion](http://purl.obolibrary.org/obo/GO_0007159) DisjointWith [in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090) - -- [leukocyte cell-cell adhesion](http://purl.obolibrary.org/obo/GO_0007159) SubClassOf not ([in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090)) - -- [leukocyte cell-cell adhesion](http://purl.obolibrary.org/obo/GO_0007159) SubClassOf [in taxon](http://purl.obolibrary.org/obo/RO_0002162) some (not ([Viridiplantae](http://purl.obolibrary.org/obo/NCBITaxon_33090))) - - - -### levator scapulae muscle `http://purl.obolibrary.org/obo/UBERON_0005461` -#### Removed -- [levator scapulae muscle](http://purl.obolibrary.org/obo/UBERON_0005461) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/bc/Levator_scapulae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [levator scapulae muscle](http://purl.obolibrary.org/obo/UBERON_0005461) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/bc/Levator_scapulae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ligament `http://purl.obolibrary.org/obo/UBERON_0000211` -#### Removed -- [ligament](http://purl.obolibrary.org/obo/UBERON_0000211) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ligament](http://purl.obolibrary.org/obo/UBERON_0000211) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ligament of knee joint `http://purl.obolibrary.org/obo/UBERON_0011088` -#### Removed -- [ligament of knee joint](http://purl.obolibrary.org/obo/UBERON_0011088) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [ligament of knee joint](http://purl.obolibrary.org/obo/UBERON_0011088) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - - -### limb `http://purl.obolibrary.org/obo/UBERON_0002101` -#### Removed -- [limb](http://purl.obolibrary.org/obo/UBERON_0002101) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extremities" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [limb](http://purl.obolibrary.org/obo/UBERON_0002101) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "extremities" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### limb bud `http://purl.obolibrary.org/obo/UBERON_0004347` -#### Removed -- [limb bud](http://purl.obolibrary.org/obo/UBERON_0004347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "limb buds" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [limb bud](http://purl.obolibrary.org/obo/UBERON_0004347) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "limb buds" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### limbic lobe `http://purl.obolibrary.org/obo/UBERON_0002600` -#### Removed -- [limbic lobe](http://purl.obolibrary.org/obo/UBERON_0002600) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Human_brain_inferior-medial_view_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [limbic lobe](http://purl.obolibrary.org/obo/UBERON_0002600) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Human_brain_inferior-medial_view_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### limbic system `http://purl.obolibrary.org/obo/UBERON_0000349` -#### Removed -- [limbic system](http://purl.obolibrary.org/obo/UBERON_0000349) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/5c/Brain_limbicsystem.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [limbic system](http://purl.obolibrary.org/obo/UBERON_0000349) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/5c/Brain_limbicsystem.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lingual artery `http://purl.obolibrary.org/obo/UBERON_0001610` -#### Removed -- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/3c/Lingual_artery.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/3c/Lingual_artery.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lip `http://purl.obolibrary.org/obo/UBERON_0001833` -#### Removed -- [lip](http://purl.obolibrary.org/obo/UBERON_0001833) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lip](http://purl.obolibrary.org/obo/UBERON_0001833) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lip](http://purl.obolibrary.org/obo/UBERON_0001833) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lip](http://purl.obolibrary.org/obo/UBERON_0001833) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lipid binding `http://purl.obolibrary.org/obo/GO_0008289` -#### Removed -- [lipid binding](http://purl.obolibrary.org/obo/GO_0008289) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - -- [lipid binding](http://purl.obolibrary.org/obo/GO_0008289) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059) - -#### Added -- [lipid binding](http://purl.obolibrary.org/obo/GO_0008289) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - -- [lipid binding](http://purl.obolibrary.org/obo/GO_0008289) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059) - - -### lipoprotein particle binding `http://purl.obolibrary.org/obo/GO_0071813` -#### Removed -- [lipoprotein particle binding](http://purl.obolibrary.org/obo/GO_0071813) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777)) - -- [lipoprotein particle binding](http://purl.obolibrary.org/obo/GO_0071813) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777) - -#### Added -- [lipoprotein particle binding](http://purl.obolibrary.org/obo/GO_0071813) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777)) - -- [lipoprotein particle binding](http://purl.obolibrary.org/obo/GO_0071813) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lipoprotein particle](http://purl.obolibrary.org/obo/GO_1990777) - - -### lipoprotein particle receptor activity `http://purl.obolibrary.org/obo/GO_0030228` -#### Removed -- [lipoprotein particle receptor activity](http://purl.obolibrary.org/obo/GO_0030228) EquivalentTo [cargo receptor activity](http://purl.obolibrary.org/obo/GO_0038024) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495)) - -- [lipoprotein particle receptor activity](http://purl.obolibrary.org/obo/GO_0030228) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495) - -#### Added -- [lipoprotein particle receptor activity](http://purl.obolibrary.org/obo/GO_0030228) EquivalentTo [cargo receptor activity](http://purl.obolibrary.org/obo/GO_0038024) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495)) - -- [lipoprotein particle receptor activity](http://purl.obolibrary.org/obo/GO_0030228) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495) - - -### liver `http://purl.obolibrary.org/obo/UBERON_0002107` -#### Removed -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb" - -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb" - -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/64/Leber_Schaf.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/64/Leber_Schaf.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [liver](http://purl.obolibrary.org/obo/UBERON_0002107) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### liver lobule `http://purl.obolibrary.org/obo/UBERON_0004647` -#### Removed -- [liver lobule](http://purl.obolibrary.org/obo/UBERON_0004647) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lobules of liver" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lobules_of_liver" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [liver lobule](http://purl.obolibrary.org/obo/UBERON_0004647) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lobuli hepatici" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [liver lobule](http://purl.obolibrary.org/obo/UBERON_0004647) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lobules of liver" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lobules_of_liver" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [liver lobule](http://purl.obolibrary.org/obo/UBERON_0004647) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lobuli hepatici" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### liver trabecula `http://purl.obolibrary.org/obo/UBERON_0010183` -#### Removed -- [liver trabecula](http://purl.obolibrary.org/obo/UBERON_0010183) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "liver trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [liver trabecula](http://purl.obolibrary.org/obo/UBERON_0010183) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "liver trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### lobar bronchus `http://purl.obolibrary.org/obo/UBERON_0002183` -#### Removed -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lobar bronchi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Secondary_bronchus" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "secondary bronchi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Secondary_bronchus" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lobar bronchi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Secondary_bronchus" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus](http://purl.obolibrary.org/obo/UBERON_0002183) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "secondary bronchi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Secondary_bronchus" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### lobar bronchus of left lung `http://purl.obolibrary.org/obo/UBERON_0003405` -#### Removed -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of left lung](http://purl.obolibrary.org/obo/UBERON_0003405) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lobar bronchus of right lung `http://purl.obolibrary.org/obo/UBERON_0003404` -#### Removed -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -#### Added -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lobar bronchus of right lung](http://purl.obolibrary.org/obo/UBERON_0003404) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lobe of thyroid gland `http://purl.obolibrary.org/obo/UBERON_0001118` -#### Removed -- [lobe of thyroid gland](http://purl.obolibrary.org/obo/UBERON_0001118) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lobe of thyroid gland](http://purl.obolibrary.org/obo/UBERON_0001118) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### locus ceruleus `http://purl.obolibrary.org/obo/UBERON_0002148` -#### Removed -- [locus ceruleus](http://purl.obolibrary.org/obo/UBERON_0002148) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [locus ceruleus](http://purl.obolibrary.org/obo/UBERON_0002148) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "loci coeruleus" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000539" - -#### Added -- [locus ceruleus](http://purl.obolibrary.org/obo/UBERON_0002148) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "loci coeruleus" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000539" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [locus ceruleus](http://purl.obolibrary.org/obo/UBERON_0002148) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### long bone `http://purl.obolibrary.org/obo/UBERON_0002495` -#### Removed -- [long bone](http://purl.obolibrary.org/obo/UBERON_0002495) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A long bone is a bone that has a shaft and 2 ends and is longer than it is wide. Long bones have a thick outside layer of compact bone and an inner medullary cavity containing bone marrow. The ends of a long bone contain spongy bone and an epiphyseal plate or line depending on the stage of development. The epiphyseal plate is a hyaline cartilage, where new bone growth takes place, lengthening the bone prior to adulthood. Bone lengthening ceases when this cartilage is lost, leaving a remnant referred to as an epiphyseal line." - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/2010" - - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/32" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://medlineplus.gov/ency/imagepages/9582.htm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Long_bone" - -#### Added -- [long bone](http://purl.obolibrary.org/obo/UBERON_0002495) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A long bone is a bone that has a shaft and 2 ends and is longer than it is wide. Long bones have a thick outside layer of compact bone and an inner medullary cavity containing bone marrow. The ends of a long bone contain spongy bone and an epiphyseal plate or line depending on the stage of development. The epiphyseal plate is a hyaline cartilage, where new bone growth takes place, lengthening the bone prior to adulthood. Bone lengthening ceases when this cartilage is lost, leaving a remnant referred to as an epiphyseal line." - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/32" - - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/2010" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://medlineplus.gov/ency/imagepages/9582.htm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Long_bone" - - -### longitudinal fissure `http://purl.obolibrary.org/obo/UBERON_0002921` -#### Removed -- [longitudinal fissure](http://purl.obolibrary.org/obo/UBERON_0002921) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "LF" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:4041" - -- [longitudinal fissure](http://purl.obolibrary.org/obo/UBERON_0002921) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [longitudinal fissure](http://purl.obolibrary.org/obo/UBERON_0002921) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "LF" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:4041" - -- [longitudinal fissure](http://purl.obolibrary.org/obo/UBERON_0002921) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### loop of Henle `http://purl.obolibrary.org/obo/UBERON_0001288` -#### Removed -- [loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001288) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001288) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### loop of Henle ascending limb thin segment `http://purl.obolibrary.org/obo/UBERON_0004193` -#### Removed -- [loop of Henle ascending limb thin segment](http://purl.obolibrary.org/obo/UBERON_0004193) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [loop of Henle ascending limb thin segment](http://purl.obolibrary.org/obo/UBERON_0004193) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lower jaw region `http://purl.obolibrary.org/obo/UBERON_0001710` -#### Removed -- [lower jaw region](http://purl.obolibrary.org/obo/UBERON_0001710) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lower jaw region](http://purl.obolibrary.org/obo/UBERON_0001710) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lower lip `http://purl.obolibrary.org/obo/UBERON_0001835` -#### Removed -- [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lower respiratory tract `http://purl.obolibrary.org/obo/UBERON_0001558` -#### Removed -- [lower respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001558) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lower respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001558) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lower respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001558) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lower respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001558) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lumbosacral nerve plexus `http://purl.obolibrary.org/obo/UBERON_0001815` -#### Removed -- [lumbosacral nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001815) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray822.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lumbosacral nerve plexus](http://purl.obolibrary.org/obo/UBERON_0001815) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray822.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### luminal cell of lactiferous duct `http://purl.obolibrary.org/obo/CL_0002662` -#### Removed -- [luminal cell of lactiferous duct](http://purl.obolibrary.org/obo/CL_0002662) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74505" - - - -### luminal layer of epithelium `http://purl.obolibrary.org/obo/UBERON_0011945` - -#### Added -- [luminal layer of epithelium](http://purl.obolibrary.org/obo/UBERON_0011945) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [luminal layer of epithelium](http://purl.obolibrary.org/obo/UBERON_0011945) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### lung `http://purl.obolibrary.org/obo/UBERON_0002048` -#### Removed -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lung bud `http://purl.obolibrary.org/obo/UBERON_0000118` -#### Removed -- [lung bud](http://purl.obolibrary.org/obo/UBERON_0000118) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lung bud](http://purl.obolibrary.org/obo/UBERON_0000118) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lung bud" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [lung bud](http://purl.obolibrary.org/obo/UBERON_0000118) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lung bud](http://purl.obolibrary.org/obo/UBERON_0000118) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lung bud" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### lymph `http://purl.obolibrary.org/obo/UBERON_0002391` -#### Removed -- [lymph](http://purl.obolibrary.org/obo/UBERON_0002391) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Illu_lymph_capillary.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lymph](http://purl.obolibrary.org/obo/UBERON_0002391) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Illu_lymph_capillary.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymph node `http://purl.obolibrary.org/obo/UBERON_0000029` -#### Removed -- [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b8/Illu_lymph_node_structure.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymph node T cell domain `http://purl.obolibrary.org/obo/UBERON_0010417` -#### Removed -- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -#### Added -- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymph node follicle `http://purl.obolibrary.org/obo/UBERON_0010748` -#### Removed -- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -#### Added -- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymph vasculature `http://purl.obolibrary.org/obo/UBERON_0004536` -#### Removed -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lymph vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005105" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "lymph vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005105" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0001473` -#### Removed -- [lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001473) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/44/Illu_lymph_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001473) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/44/Illu_lymph_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### lymphocyte activation `http://purl.obolibrary.org/obo/GO_0046649` -#### Removed -- [lymphocyte activation](http://purl.obolibrary.org/obo/GO_0046649) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [lymphocyte](http://purl.obolibrary.org/obo/CL_0000542)) - -- [lymphocyte activation](http://purl.obolibrary.org/obo/GO_0046649) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [lymphocyte](http://purl.obolibrary.org/obo/CL_0000542) - -#### Added -- [lymphocyte activation](http://purl.obolibrary.org/obo/GO_0046649) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lymphocyte](http://purl.obolibrary.org/obo/CL_0000542)) - -- [lymphocyte activation](http://purl.obolibrary.org/obo/GO_0046649) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [lymphocyte](http://purl.obolibrary.org/obo/CL_0000542) - - -### lymphoid system `http://purl.obolibrary.org/obo/UBERON_0002465` -#### Removed -- [lymphoid system](http://purl.obolibrary.org/obo/UBERON_0002465) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/TE-Lymphatic_system_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [lymphoid system](http://purl.obolibrary.org/obo/UBERON_0002465) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/TE-Lymphatic_system_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### macrophage `http://purl.obolibrary.org/obo/CL_0000235` -#### Removed -- [macrophage](http://purl.obolibrary.org/obo/CL_0000235) SubClassOf [phagocyte](http://purl.obolibrary.org/obo/CL_0000234) - -#### Added -- [macrophage](http://purl.obolibrary.org/obo/CL_0000235) SubClassOf [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) - - -### macrophage activation `http://purl.obolibrary.org/obo/GO_0042116` -#### Removed -- [macrophage activation](http://purl.obolibrary.org/obo/GO_0042116) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [macrophage](http://purl.obolibrary.org/obo/CL_0000235)) - -- [macrophage activation](http://purl.obolibrary.org/obo/GO_0042116) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [macrophage](http://purl.obolibrary.org/obo/CL_0000235) - -#### Added -- [macrophage activation](http://purl.obolibrary.org/obo/GO_0042116) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [macrophage](http://purl.obolibrary.org/obo/CL_0000235)) - -- [macrophage activation](http://purl.obolibrary.org/obo/GO_0042116) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [macrophage](http://purl.obolibrary.org/obo/CL_0000235) - - -### macrophage differentiation `http://purl.obolibrary.org/obo/GO_0030225` - -#### Added -- [macrophage differentiation](http://purl.obolibrary.org/obo/GO_0030225) SubClassOf [mononuclear cell differentiation](http://purl.obolibrary.org/obo/GO_1903131) - - -### macrophage migration `http://purl.obolibrary.org/obo/GO_1905517` - -#### Added -- [macrophage migration](http://purl.obolibrary.org/obo/GO_1905517) SubClassOf [mononuclear cell migration](http://purl.obolibrary.org/obo/GO_0071674) - - -### macula `http://purl.obolibrary.org/obo/UBERON_0000054` -#### Removed -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "maculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acoustic maculae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A09.246.631.909.625.125" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "acoustic maculae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:A09.246.631.909.625.125" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "maculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [macula](http://purl.obolibrary.org/obo/UBERON_0000054) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### macula lutea `http://purl.obolibrary.org/obo/UBERON_0000053` -#### Removed -- [macula lutea](http://purl.obolibrary.org/obo/UBERON_0000053) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [macula lutea](http://purl.obolibrary.org/obo/UBERON_0000053) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### macula of utricle of membranous labyrinth `http://purl.obolibrary.org/obo/UBERON_0002214` -#### Removed -- [macula of utricle of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0002214) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [macula of utricle of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0002214) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "maculae utricle" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000030" - -#### Added -- [macula of utricle of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0002214) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "maculae utricle" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000030" - -- [macula of utricle of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0002214) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### male genital duct `http://purl.obolibrary.org/obo/UBERON_0006947` -#### Removed -- [male genital duct](http://purl.obolibrary.org/obo/UBERON_0006947) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sperm ducts" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001268" - -- [male genital duct](http://purl.obolibrary.org/obo/UBERON_0006947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -#### Added -- [male genital duct](http://purl.obolibrary.org/obo/UBERON_0006947) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [male genital duct](http://purl.obolibrary.org/obo/UBERON_0006947) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sperm ducts" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001268" - - -### male germ-line stem cell asymmetric division `http://purl.obolibrary.org/obo/GO_0048133` -#### Removed -- [male germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048133) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [male germ line stem cell](http://purl.obolibrary.org/obo/CL_0000016)) - -- [male germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048133) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [male germ line stem cell](http://purl.obolibrary.org/obo/CL_0000016) - -#### Added -- [male germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048133) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [male germ line stem cell](http://purl.obolibrary.org/obo/CL_0000016)) - -- [male germ-line stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0048133) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [male germ line stem cell](http://purl.obolibrary.org/obo/CL_0000016) - - -### male reproductive system `http://purl.obolibrary.org/obo/UBERON_0000079` -#### Removed -- [male reproductive system](http://purl.obolibrary.org/obo/UBERON_0000079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -#### Added -- [male reproductive system](http://purl.obolibrary.org/obo/UBERON_0000079) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### male urethra `http://purl.obolibrary.org/obo/UBERON_0001333` -#### Removed -- [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urethra.glb" - -- [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urethra.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mammalian vulva `http://purl.obolibrary.org/obo/UBERON_0000997` -#### Removed -- [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/da/Female_unshaved_genitalia.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/da/Female_unshaved_genitalia.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mammary duct `http://purl.obolibrary.org/obo/UBERON_0001765` -#### Removed -- [mammary duct](http://purl.obolibrary.org/obo/UBERON_0001765) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mammary duct](http://purl.obolibrary.org/obo/UBERON_0001765) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mammary gland `http://purl.obolibrary.org/obo/UBERON_0001911` -#### Removed -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mammae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mammae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [mammary gland](http://purl.obolibrary.org/obo/UBERON_0001911) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mammary gland alveolus `http://purl.obolibrary.org/obo/UBERON_0003214` -#### Removed -- [mammary gland alveolus](http://purl.obolibrary.org/obo/UBERON_0003214) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mammary alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [mammary gland alveolus](http://purl.obolibrary.org/obo/UBERON_0003214) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mammary alveoli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### mammillary body `http://purl.obolibrary.org/obo/UBERON_0002206` -#### Removed -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MMB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:865" - -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mammillary body](http://purl.obolibrary.org/obo/UBERON_0002206) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MMB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:865" - - -### mandibular nerve `http://purl.obolibrary.org/obo/UBERON_0000375` -#### Removed -- [mandibular nerve](http://purl.obolibrary.org/obo/UBERON_0000375) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray781.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mandibular nerve](http://purl.obolibrary.org/obo/UBERON_0000375) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray781.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mandibular symphysis `http://purl.obolibrary.org/obo/UBERON_0006606` -#### Removed -- [mandibular symphysis](http://purl.obolibrary.org/obo/UBERON_0006606) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mandibular symphysis](http://purl.obolibrary.org/obo/UBERON_0006606) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### manus `http://purl.obolibrary.org/obo/UBERON_0002398` -#### Removed -- [manus](http://purl.obolibrary.org/obo/UBERON_0002398) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/76/LeftHand0.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [manus](http://purl.obolibrary.org/obo/UBERON_0002398) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "forefeet" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [manus](http://purl.obolibrary.org/obo/UBERON_0002398) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/76/LeftHand0.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [manus](http://purl.obolibrary.org/obo/UBERON_0002398) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "forefeet" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### marginal zone of spleen `http://purl.obolibrary.org/obo/UBERON_0001251` -#### Removed -- [marginal zone of spleen](http://purl.obolibrary.org/obo/UBERON_0001251) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [marginal zone of spleen](http://purl.obolibrary.org/obo/UBERON_0001251) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mast cell activation `http://purl.obolibrary.org/obo/GO_0045576` -#### Removed -- [mast cell activation](http://purl.obolibrary.org/obo/GO_0045576) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [mast cell](http://purl.obolibrary.org/obo/CL_0000097)) - -- [mast cell activation](http://purl.obolibrary.org/obo/GO_0045576) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [mast cell](http://purl.obolibrary.org/obo/CL_0000097) - -#### Added -- [mast cell activation](http://purl.obolibrary.org/obo/GO_0045576) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mast cell](http://purl.obolibrary.org/obo/CL_0000097)) - -- [mast cell activation](http://purl.obolibrary.org/obo/GO_0045576) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mast cell](http://purl.obolibrary.org/obo/CL_0000097) - - -### material entity in digestive tract `http://purl.obolibrary.org/obo/UBERON_0035118` -#### Removed -- [material entity in digestive tract](http://purl.obolibrary.org/obo/UBERON_0035118) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "digestive tract contents" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [material entity in digestive tract](http://purl.obolibrary.org/obo/UBERON_0035118) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "digestive tract contents" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### maxillary artery `http://purl.obolibrary.org/obo/UBERON_0001616` -#### Removed -- [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray510.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/39/Gray510.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### maxillary nerve `http://purl.obolibrary.org/obo/UBERON_0000377` -#### Removed -- [maxillary nerve](http://purl.obolibrary.org/obo/UBERON_0000377) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray779.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [maxillary nerve](http://purl.obolibrary.org/obo/UBERON_0000377) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray779.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### maxillary prominence `http://purl.obolibrary.org/obo/UBERON_0005868` -#### Removed -- [maxillary prominence](http://purl.obolibrary.org/obo/UBERON_0005868) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [maxillary prominence](http://purl.obolibrary.org/obo/UBERON_0005868) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### medial circumflex femoral artery `http://purl.obolibrary.org/obo/UBERON_0001356` -#### Removed -- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### medial ganglionic eminence `http://purl.obolibrary.org/obo/UBERON_0004024` -#### Removed -- [medial ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004024) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MGE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [medial ganglionic eminence](http://purl.obolibrary.org/obo/UBERON_0004024) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MGE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - - -### medial nasal prominence `http://purl.obolibrary.org/obo/UBERON_0004068` -#### Removed -- [medial nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004068) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [medial nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004068) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### median lingual swelling `http://purl.obolibrary.org/obo/UBERON_0006756` -#### Removed -- [median lingual swelling](http://purl.obolibrary.org/obo/UBERON_0006756) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [median lingual swelling](http://purl.obolibrary.org/obo/UBERON_0006756) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### median preoptic nucleus `http://purl.obolibrary.org/obo/UBERON_0002625` -#### Removed -- [median preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002625) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MnPO" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1208" - -#### Added -- [median preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002625) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MnPO" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1208" - -- [median preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002625) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006168" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### mediastinum `http://purl.obolibrary.org/obo/UBERON_0003728` -#### Removed -- [mediastinum](http://purl.obolibrary.org/obo/UBERON_0003728) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mediastinum](http://purl.obolibrary.org/obo/UBERON_0003728) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mediastinum testis `http://purl.obolibrary.org/obo/UBERON_0005051` -#### Removed -- [mediastinum testis](http://purl.obolibrary.org/obo/UBERON_0005051) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mediastinum testis](http://purl.obolibrary.org/obo/UBERON_0005051) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### medulla oblongata `http://purl.obolibrary.org/obo/UBERON_0001896` -#### Removed -- [medulla oblongata](http://purl.obolibrary.org/obo/UBERON_0001896) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [medulla oblongata](http://purl.obolibrary.org/obo/UBERON_0001896) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### medulla of lymph node `http://purl.obolibrary.org/obo/UBERON_0002007` -#### Removed -- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -#### Added -- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### melatonin binding `http://purl.obolibrary.org/obo/GO_1904408` -#### Removed -- [melatonin binding](http://purl.obolibrary.org/obo/GO_1904408) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796)) - -- [melatonin binding](http://purl.obolibrary.org/obo/GO_1904408) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796) - -#### Added -- [melatonin binding](http://purl.obolibrary.org/obo/GO_1904408) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796)) - -- [melatonin binding](http://purl.obolibrary.org/obo/GO_1904408) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796) - - -### melatonin receptor activity `http://purl.obolibrary.org/obo/GO_0008502` -#### Removed -- [melatonin receptor activity](http://purl.obolibrary.org/obo/GO_0008502) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796)) - -- [melatonin receptor activity](http://purl.obolibrary.org/obo/GO_0008502) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796) - -#### Added -- [melatonin receptor activity](http://purl.obolibrary.org/obo/GO_0008502) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796)) - -- [melatonin receptor activity](http://purl.obolibrary.org/obo/GO_0008502) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16796](http://purl.obolibrary.org/obo/CHEBI_16796) - - -### membrane biogenesis `http://purl.obolibrary.org/obo/GO_0044091` -#### Removed -- [membrane biogenesis](http://purl.obolibrary.org/obo/GO_0044091) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [membrane](http://purl.obolibrary.org/obo/GO_0016020)) - -- [membrane biogenesis](http://purl.obolibrary.org/obo/GO_0044091) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [membrane](http://purl.obolibrary.org/obo/GO_0016020) - -#### Added -- [membrane biogenesis](http://purl.obolibrary.org/obo/GO_0044091) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [membrane](http://purl.obolibrary.org/obo/GO_0016020)) - -- [membrane biogenesis](http://purl.obolibrary.org/obo/GO_0044091) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [membrane](http://purl.obolibrary.org/obo/GO_0016020) - - -### membrane bone `http://purl.obolibrary.org/obo/UBERON_0007842` -#### Removed -- [membrane bone](http://purl.obolibrary.org/obo/UBERON_0007842) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "membrane bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001636" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [membrane bone](http://purl.obolibrary.org/obo/UBERON_0007842) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "membrane bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001636" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### membranous labyrinth `http://purl.obolibrary.org/obo/UBERON_0001849` -#### Removed -- [membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001849) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray924.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001849) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray924.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### memory T cell activation `http://purl.obolibrary.org/obo/GO_0035709` -#### Removed -- [memory T cell activation](http://purl.obolibrary.org/obo/GO_0035709) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [memory T cell](http://purl.obolibrary.org/obo/CL_0000813)) - -- [memory T cell activation](http://purl.obolibrary.org/obo/GO_0035709) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [memory T cell](http://purl.obolibrary.org/obo/CL_0000813) - -#### Added -- [memory T cell activation](http://purl.obolibrary.org/obo/GO_0035709) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [memory T cell](http://purl.obolibrary.org/obo/CL_0000813)) - -- [memory T cell activation](http://purl.obolibrary.org/obo/GO_0035709) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [memory T cell](http://purl.obolibrary.org/obo/CL_0000813) - - -### meninx `http://purl.obolibrary.org/obo/UBERON_0002360` -#### Removed -- [meninx](http://purl.obolibrary.org/obo/UBERON_0002360) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "Not consider part of the CNS/neuraxis in FMA" - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/1261" - - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "FMA" - -- [meninx](http://purl.obolibrary.org/obo/UBERON_0002360) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/48/Illu_meninges.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [meninx](http://purl.obolibrary.org/obo/UBERON_0002360) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/48/Illu_meninges.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [meninx](http://purl.obolibrary.org/obo/UBERON_0002360) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "Not consider part of the CNS/neuraxis in FMA" - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "FMA" - - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/1261" - - -### meninx of hindbrain `http://purl.obolibrary.org/obo/UBERON_0003291` -#### Removed -- [meninx of hindbrain](http://purl.obolibrary.org/obo/UBERON_0003291) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "rhomencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000011" - -#### Added -- [meninx of hindbrain](http://purl.obolibrary.org/obo/UBERON_0003291) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "rhomencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000011" - - -### meninx of midbrain `http://purl.obolibrary.org/obo/UBERON_0003288` -#### Removed -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mesencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000012" - -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "meninges of midbrain" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "midbrain meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -#### Added -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mesencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000012" - -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "midbrain meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -- [meninx of midbrain](http://purl.obolibrary.org/obo/UBERON_0003288) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "meninges of midbrain" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - - -### meninx of spinal cord `http://purl.obolibrary.org/obo/UBERON_0003292` -#### Removed -- [meninx of spinal cord](http://purl.obolibrary.org/obo/UBERON_0003292) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "menines of spinal cord" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [meninx of spinal cord](http://purl.obolibrary.org/obo/UBERON_0003292) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [meninx of spinal cord](http://purl.obolibrary.org/obo/UBERON_0003292) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [meninx of spinal cord](http://purl.obolibrary.org/obo/UBERON_0003292) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "menines of spinal cord" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### meninx of telencephalon `http://purl.obolibrary.org/obo/UBERON_0003289` -#### Removed -- [meninx of telencephalon](http://purl.obolibrary.org/obo/UBERON_0003289) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "meninges of telencephalon" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -- [meninx of telencephalon](http://purl.obolibrary.org/obo/UBERON_0003289) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "telencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -#### Added -- [meninx of telencephalon](http://purl.obolibrary.org/obo/UBERON_0003289) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "telencephalon meninges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - -- [meninx of telencephalon](http://purl.obolibrary.org/obo/UBERON_0003289) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "meninges of telencephalon" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" - - -### mesenchymal stem cell of apical papilla `http://purl.obolibrary.org/obo/CL_4040005` - -#### Added -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "stem cells from the apical papilla" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30834270" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A mesenchymal stem cell that is part of the apical papilla tooth root." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:34026757" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30834270" - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "SCAP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:37887345" - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [date](http://purl.org/dc/terms/date) "2023-11-02T09:44:47Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-0819-0473](https://orcid.org/0000-0002-0819-0473) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesenchymal stem cell of apical papilla" - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "SCAPs" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30834270" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "The mesenchymal stem cells of the apical papilla have high capacity for osteogenic, adipogenic, and chondrogenic differentiation." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:34026757" - -- Class: [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) SubClassOf [mesenchymal stem cell](http://purl.obolibrary.org/obo/CL_0000134) - -- [mesenchymal stem cell of apical papilla](http://purl.obolibrary.org/obo/CL_4040005) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) - - -### mesenchymal to epithelial transition `http://purl.obolibrary.org/obo/GO_0060231` -#### Removed -- [mesenchymal to epithelial transition](http://purl.obolibrary.org/obo/GO_0060231) EquivalentTo [cell differentiation](http://purl.obolibrary.org/obo/GO_0030154) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) - -- [mesenchymal to epithelial transition](http://purl.obolibrary.org/obo/GO_0060231) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019) - -#### Added -- [mesenchymal to epithelial transition](http://purl.obolibrary.org/obo/GO_0060231) EquivalentTo [cell differentiation](http://purl.obolibrary.org/obo/GO_0030154) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) - -- [mesenchymal to epithelial transition](http://purl.obolibrary.org/obo/GO_0060231) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019) - - -### mesenchymal-endodermal cell signaling `http://purl.obolibrary.org/obo/GO_0060497` - -#### Added -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesenchymal-endodermal cell signalling" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060497" - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesenchymal-endodermal cell signaling" - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- Class: [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223)) - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) SubClassOf [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223) - -- [mesenchymal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0060497) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019) - - -### mesenchymal-epithelial cell signaling `http://purl.obolibrary.org/obo/GO_0060638` - -#### Added -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "dph" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2009-05-19T03:59:05Z" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesenchymal-epithelial cell signalling" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesenchymal-epithelial cell signaling" - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060638" - -- Class: [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066)) - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [epithelial cell](http://purl.obolibrary.org/obo/CL_0000066) - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) SubClassOf [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) - -- [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesenchymal cell](http://purl.obolibrary.org/obo/CL_0008019) - - -### mesenchymal-epithelial cell signaling involved in lung development `http://purl.obolibrary.org/obo/GO_0060496` - -#### Added -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060496" - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mtg_lung" - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesenchymal-epithelial cell signalling involved in lung development" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesenchymal-epithelial cell signaling involved in lung development" - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- Class: [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) EquivalentTo [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lung development](http://purl.obolibrary.org/obo/GO_0030324)) - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) SubClassOf [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) - -- [mesenchymal-epithelial cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060496) SubClassOf [cell-cell signaling involved in lung development](http://purl.obolibrary.org/obo/GO_0060495) - - -### mesenchymal-epithelial cell signaling involved in prostate gland development `http://purl.obolibrary.org/obo/GO_0060739` - -#### Added -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesenchymal-epithelial cell signalling involved in prostate gland development" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesenchymal-epithelial cell signaling involved in prostate gland development" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "dph" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted contributing to the progression of the prostate gland over time." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dph" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0060739" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2009-06-15T09:35:08Z" - -- Class: [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) EquivalentTo [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [prostate gland development](http://purl.obolibrary.org/obo/GO_0030850)) - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) SubClassOf [mesenchymal-epithelial cell signaling](http://purl.obolibrary.org/obo/GO_0060638) - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [prostate gland development](http://purl.obolibrary.org/obo/GO_0030850) - -- [mesenchymal-epithelial cell signaling involved in prostate gland development](http://purl.obolibrary.org/obo/GO_0060739) SubClassOf [reproductive process](http://purl.obolibrary.org/obo/GO_0022414) - - -### mesenchyme `http://purl.obolibrary.org/obo/UBERON_0003104` -#### Removed -- [mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003104) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f4/Mesenchymal_Stem_Cell.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesenchyme](http://purl.obolibrary.org/obo/UBERON_0003104) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f4/Mesenchymal_Stem_Cell.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mesenteric lymph node `http://purl.obolibrary.org/obo/UBERON_0002509` -#### Removed -- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb" - -- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb" - -#### Added -- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mesentery `http://purl.obolibrary.org/obo/UBERON_0002095` -#### Removed -- [mesentery](http://purl.obolibrary.org/obo/UBERON_0002095) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray1038.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesentery](http://purl.obolibrary.org/obo/UBERON_0002095) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray1038.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mesoderm `http://purl.obolibrary.org/obo/UBERON_0000926` -#### Removed -- [mesoderm](http://purl.obolibrary.org/obo/UBERON_0000926) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesoderm](http://purl.obolibrary.org/obo/UBERON_0000926) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mesoderm blood island `http://purl.obolibrary.org/obo/UBERON_0003304` -#### Removed -- [mesoderm blood island](http://purl.obolibrary.org/obo/UBERON_0003304) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesoderm blood islands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0003241" - -#### Added -- [mesoderm blood island](http://purl.obolibrary.org/obo/UBERON_0003304) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesoderm blood islands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0003241" - - -### mesodermal-endodermal cell signaling `http://purl.obolibrary.org/obo/GO_0003131` - -#### Added -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [created by](http://www.geneontology.org/formats/oboInOwl#created_by) "tb" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [label](http://www.w3.org/2000/01/rdf-schema#label) "mesodermal-endodermal cell signaling" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [creation date](http://www.geneontology.org/formats/oboInOwl#creation_date) "2009-09-22T03:07:34Z" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Any process that mediates the transfer of information from mesodermal cells to endodermal cells." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mtg_heart" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "biological_process" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesodermal-endodermal cell signalling" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mah" - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) [id](http://www.geneontology.org/formats/oboInOwl#id) "GO:0003131" - -- Class: [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) EquivalentTo [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) and ([has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesodermal cell](http://purl.obolibrary.org/obo/CL_0000222)) and ([has end location](http://purl.obolibrary.org/obo/RO_0002232) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223)) - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) SubClassOf [has start location](http://purl.obolibrary.org/obo/RO_0002231) some [mesodermal cell](http://purl.obolibrary.org/obo/CL_0000222) - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) SubClassOf [has end location](http://purl.obolibrary.org/obo/RO_0002232) some [endodermal cell](http://purl.obolibrary.org/obo/CL_0000223) - -- [mesodermal-endodermal cell signaling](http://purl.obolibrary.org/obo/GO_0003131) SubClassOf [cell-cell signaling](http://purl.obolibrary.org/obo/GO_0007267) - - -### mesonephric duct `http://purl.obolibrary.org/obo/UBERON_0003074` -#### Removed -- [mesonephric duct](http://purl.obolibrary.org/obo/UBERON_0003074) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesonephric duct](http://purl.obolibrary.org/obo/UBERON_0003074) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mesonephric duct](http://purl.obolibrary.org/obo/UBERON_0003074) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005990" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### mesonephric podocyte `http://purl.obolibrary.org/obo/CL_0002523` -#### Removed -- [mesonephric podocyte](http://purl.obolibrary.org/obo/CL_0002523) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### mesonephric tubule `http://purl.obolibrary.org/obo/UBERON_0000083` -#### Removed -- [mesonephric tubule](http://purl.obolibrary.org/obo/UBERON_0000083) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "renal tubules" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000500" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [mesonephric tubule](http://purl.obolibrary.org/obo/UBERON_0000083) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "renal tubules" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000500" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### mesonephros `http://purl.obolibrary.org/obo/UBERON_0000080` -#### Removed -- [mesonephros](http://purl.obolibrary.org/obo/UBERON_0000080) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesonephroi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [mesonephros](http://purl.obolibrary.org/obo/UBERON_0000080) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray986.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesonephros](http://purl.obolibrary.org/obo/UBERON_0000080) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray986.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mesonephros](http://purl.obolibrary.org/obo/UBERON_0000080) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesonephroi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### mesothelium `http://purl.obolibrary.org/obo/UBERON_0001136` -#### Removed -- [mesothelium](http://purl.obolibrary.org/obo/UBERON_0001136) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mesothelium](http://purl.obolibrary.org/obo/UBERON_0001136) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metacarpal bone `http://purl.obolibrary.org/obo/UBERON_0002374` -#### Removed -- [metacarpal bone](http://purl.obolibrary.org/obo/UBERON_0002374) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metacarpal bone](http://purl.obolibrary.org/obo/UBERON_0002374) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metacarpophalangeal joint `http://purl.obolibrary.org/obo/UBERON_0003695` -#### Removed -- [metacarpophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003695) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray337.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [metacarpophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003695) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "knuckles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0001-5208-3432" - -#### Added -- [metacarpophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003695) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray337.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [metacarpophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003695) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "knuckles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0001-5208-3432" - - -### metacarpus region `http://purl.obolibrary.org/obo/UBERON_0004453` -#### Removed -- [metacarpus region](http://purl.obolibrary.org/obo/UBERON_0004453) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metacarpus region](http://purl.obolibrary.org/obo/UBERON_0004453) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metacarpus skeleton `http://purl.obolibrary.org/obo/UBERON_0010544` -#### Removed -- [metacarpus skeleton](http://purl.obolibrary.org/obo/UBERON_0010544) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metacarpus skeleton](http://purl.obolibrary.org/obo/UBERON_0010544) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metaphysis `http://purl.obolibrary.org/obo/UBERON_0001438` -#### Removed -- [metaphysis](http://purl.obolibrary.org/obo/UBERON_0001438) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "metaphyses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [metaphysis](http://purl.obolibrary.org/obo/UBERON_0001438) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "metaphyses" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### metatarsal bone `http://purl.obolibrary.org/obo/UBERON_0001448` -#### Removed -- [metatarsal bone](http://purl.obolibrary.org/obo/UBERON_0001448) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossa metatarsalia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002347" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [metatarsal bone](http://purl.obolibrary.org/obo/UBERON_0001448) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metatarsal bone](http://purl.obolibrary.org/obo/UBERON_0001448) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [metatarsal bone](http://purl.obolibrary.org/obo/UBERON_0001448) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ossa metatarsalia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002347" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### metatarsophalangeal joint `http://purl.obolibrary.org/obo/UBERON_0003696` -#### Removed -- [metatarsophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003696) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray268.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metatarsophalangeal joint](http://purl.obolibrary.org/obo/UBERON_0003696) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray268.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metatarsus skeleton `http://purl.obolibrary.org/obo/UBERON_0010545` -#### Removed -- [metatarsus skeleton](http://purl.obolibrary.org/obo/UBERON_0010545) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metatarsus skeleton](http://purl.obolibrary.org/obo/UBERON_0010545) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### metathalamus `http://purl.obolibrary.org/obo/UBERON_0002704` -#### Removed -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MTh" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1461" - -#### Added -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MTh" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1461" - - -### metencephalon `http://purl.obolibrary.org/obo/UBERON_0001895` -#### Removed -- [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### microcirculatory vessel `http://purl.obolibrary.org/obo/UBERON_0010523` -#### Removed -- [microcirculatory vessel](http://purl.obolibrary.org/obo/UBERON_0010523) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "microcirculatory vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005251" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [microcirculatory vessel](http://purl.obolibrary.org/obo/UBERON_0010523) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "microcirculatory vessels" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0005251" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### microglial cell `http://purl.obolibrary.org/obo/CL_0000129` -#### Removed -- [microglial cell](http://purl.obolibrary.org/obo/CL_0000129) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:54540" - - - -### microglial cell activation `http://purl.obolibrary.org/obo/GO_0001774` -#### Removed -- [microglial cell activation](http://purl.obolibrary.org/obo/GO_0001774) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [microglial cell](http://purl.obolibrary.org/obo/CL_0000129)) - -- [microglial cell activation](http://purl.obolibrary.org/obo/GO_0001774) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [microglial cell](http://purl.obolibrary.org/obo/CL_0000129) - -#### Added -- [microglial cell activation](http://purl.obolibrary.org/obo/GO_0001774) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [microglial cell](http://purl.obolibrary.org/obo/CL_0000129)) - -- [microglial cell activation](http://purl.obolibrary.org/obo/GO_0001774) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [microglial cell](http://purl.obolibrary.org/obo/CL_0000129) - - -### microtubule binding `http://purl.obolibrary.org/obo/GO_0008017` -#### Removed -- [microtubule binding](http://purl.obolibrary.org/obo/GO_0008017) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [microtubule](http://purl.obolibrary.org/obo/GO_0005874)) - -- [microtubule binding](http://purl.obolibrary.org/obo/GO_0008017) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [microtubule](http://purl.obolibrary.org/obo/GO_0005874) - -#### Added -- [microtubule binding](http://purl.obolibrary.org/obo/GO_0008017) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [microtubule](http://purl.obolibrary.org/obo/GO_0005874)) - -- [microtubule binding](http://purl.obolibrary.org/obo/GO_0008017) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [microtubule](http://purl.obolibrary.org/obo/GO_0005874) - - -### midbrain `http://purl.obolibrary.org/obo/UBERON_0001891` -#### Removed -- [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1667" - -- [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1667" - -- [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### midbrain tectum `http://purl.obolibrary.org/obo/UBERON_0002314` -#### Removed -- [midbrain tectum](http://purl.obolibrary.org/obo/UBERON_0002314) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray685.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [midbrain tectum](http://purl.obolibrary.org/obo/UBERON_0002314) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray685.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### midbrain tegmentum `http://purl.obolibrary.org/obo/UBERON_0001943` -#### Removed -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MTg" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1200" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -#### Added -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "MTg" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1200" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### middle colic artery `http://purl.obolibrary.org/obo/UBERON_0001196` -#### Removed -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray537.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Gray537.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### middle colic vein `http://purl.obolibrary.org/obo/UBERON_0001218` -#### Removed -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### midgut `http://purl.obolibrary.org/obo/UBERON_0001045` -#### Removed -- [midgut](http://purl.obolibrary.org/obo/UBERON_0001045) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [midgut](http://purl.obolibrary.org/obo/UBERON_0001045) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Illu_small_intestine.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### modified amino acid binding `http://purl.obolibrary.org/obo/GO_0072341` -#### Removed -- [modified amino acid binding](http://purl.obolibrary.org/obo/GO_0072341) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_83821](http://purl.obolibrary.org/obo/CHEBI_83821)) - -- [modified amino acid binding](http://purl.obolibrary.org/obo/GO_0072341) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_83821](http://purl.obolibrary.org/obo/CHEBI_83821) - -#### Added -- [modified amino acid binding](http://purl.obolibrary.org/obo/GO_0072341) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_83821](http://purl.obolibrary.org/obo/CHEBI_83821)) - -- [modified amino acid binding](http://purl.obolibrary.org/obo/GO_0072341) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_83821](http://purl.obolibrary.org/obo/CHEBI_83821) - - -### molecular_function `http://purl.obolibrary.org/obo/GO_0003674` -#### Removed -- [molecular_function](http://purl.obolibrary.org/obo/GO_0003674) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex." - -#### Added -- [molecular_function](http://purl.obolibrary.org/obo/GO_0003674) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Note that, in addition to forming the root of the molecular function ontology, this term is recommended for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex." - - -### monocarboxylic acid binding `http://purl.obolibrary.org/obo/GO_0033293` -#### Removed -- [monocarboxylic acid binding](http://purl.obolibrary.org/obo/GO_0033293) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35757](http://purl.obolibrary.org/obo/CHEBI_35757)) - -- [monocarboxylic acid binding](http://purl.obolibrary.org/obo/GO_0033293) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35757](http://purl.obolibrary.org/obo/CHEBI_35757) - -#### Added -- [monocarboxylic acid binding](http://purl.obolibrary.org/obo/GO_0033293) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35757](http://purl.obolibrary.org/obo/CHEBI_35757)) - -- [monocarboxylic acid binding](http://purl.obolibrary.org/obo/GO_0033293) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35757](http://purl.obolibrary.org/obo/CHEBI_35757) - - -### monocyte `http://purl.obolibrary.org/obo/CL_0000576` -#### Removed -- [monocyte](http://purl.obolibrary.org/obo/CL_0000576) SubClassOf [mononuclear cell](http://purl.obolibrary.org/obo/CL_0000842) - -#### Added -- [monocyte](http://purl.obolibrary.org/obo/CL_0000576) SubClassOf [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) - - -### monocyte activation `http://purl.obolibrary.org/obo/GO_0042117` -#### Removed -- [monocyte activation](http://purl.obolibrary.org/obo/GO_0042117) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [monocyte](http://purl.obolibrary.org/obo/CL_0000576)) - -- [monocyte activation](http://purl.obolibrary.org/obo/GO_0042117) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [monocyte](http://purl.obolibrary.org/obo/CL_0000576) - -#### Added -- [monocyte activation](http://purl.obolibrary.org/obo/GO_0042117) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [monocyte](http://purl.obolibrary.org/obo/CL_0000576)) - -- [monocyte activation](http://purl.obolibrary.org/obo/GO_0042117) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [monocyte](http://purl.obolibrary.org/obo/CL_0000576) - - -### mononuclear osteoclast `http://purl.obolibrary.org/obo/CL_0000778` -#### Removed -- [mononuclear osteoclast](http://purl.obolibrary.org/obo/CL_0000778) SubClassOf [mononuclear cell](http://purl.obolibrary.org/obo/CL_0000842) - -#### Added -- [mononuclear osteoclast](http://purl.obolibrary.org/obo/CL_0000778) SubClassOf [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) - - -### mononuclear phagocyte `http://purl.obolibrary.org/obo/CL_0000113` -#### Removed -- [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) SubClassOf [single nucleate cell](http://purl.obolibrary.org/obo/CL_0000226) - -#### Added -- [mononuclear phagocyte](http://purl.obolibrary.org/obo/CL_0000113) SubClassOf [mononuclear cell](http://purl.obolibrary.org/obo/CL_0000842) - - -### morula `http://purl.obolibrary.org/obo/UBERON_0000085` -#### Removed -- [morula](http://purl.obolibrary.org/obo/UBERON_0000085) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [morula](http://purl.obolibrary.org/obo/UBERON_0000085) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mouth `http://purl.obolibrary.org/obo/UBERON_0000165` -#### Removed -- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mucosa `http://purl.obolibrary.org/obo/UBERON_0000344` -#### Removed -- [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mucosa of stomach `http://purl.obolibrary.org/obo/UBERON_0001199` -#### Removed -- [mucosa of stomach](http://purl.obolibrary.org/obo/UBERON_0001199) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/1/1c/Normal_gastric_mucosa_intermed_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mucosa of stomach](http://purl.obolibrary.org/obo/UBERON_0001199) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/1/1c/Normal_gastric_mucosa_intermed_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### mucous gland `http://purl.obolibrary.org/obo/UBERON_0000414` -#### Removed -- [mucous gland](http://purl.obolibrary.org/obo/UBERON_0000414) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [mucous gland](http://purl.obolibrary.org/obo/UBERON_0000414) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### multi-tissue structure `http://purl.obolibrary.org/obo/UBERON_0000481` -#### Removed -- [multi-tissue structure](http://purl.obolibrary.org/obo/UBERON_0000481) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "multi-tissue structures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001488" - -#### Added -- [multi-tissue structure](http://purl.obolibrary.org/obo/UBERON_0000481) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "multi-tissue structures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001488" - - -### multinuclear osteoclast `http://purl.obolibrary.org/obo/CL_0000779` -#### Removed -- [multinuclear osteoclast](http://purl.obolibrary.org/obo/CL_0000779) SubClassOf [multinucleate cell](http://purl.obolibrary.org/obo/CL_0000228) - -#### Added -- [multinuclear osteoclast](http://purl.obolibrary.org/obo/CL_0000779) SubClassOf [multinucleated phagocyte](http://purl.obolibrary.org/obo/CL_0000783) - - -### musculature `http://purl.obolibrary.org/obo/UBERON_0001015` -#### Removed -- [musculature](http://purl.obolibrary.org/obo/UBERON_0001015) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e5/Muscles_anterior_labeled.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [musculature](http://purl.obolibrary.org/obo/UBERON_0001015) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e5/Muscles_anterior_labeled.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### musculature of neck `http://purl.obolibrary.org/obo/UBERON_0004465` -#### Removed -- [musculature of neck](http://purl.obolibrary.org/obo/UBERON_0004465) SubClassOf [craniocervical region musculature](http://purl.obolibrary.org/obo/UBERON_0008229) - -#### Added -- [musculature of neck](http://purl.obolibrary.org/obo/UBERON_0004465) SubClassOf [musculature](http://purl.obolibrary.org/obo/UBERON_0001015) - - -### mushroom body `http://purl.obolibrary.org/obo/UBERON_0001058` -#### Removed -- [mushroom body](http://purl.obolibrary.org/obo/UBERON_0001058) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mushroom bodies" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [mushroom body](http://purl.obolibrary.org/obo/UBERON_0001058) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mushroom bodies" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### myelencephalon `http://purl.obolibrary.org/obo/UBERON_0005290` -#### Removed -- [myelencephalon](http://purl.obolibrary.org/obo/UBERON_0005290) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [myelencephalon](http://purl.obolibrary.org/obo/UBERON_0005290) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### myeloid dendritic cell activation `http://purl.obolibrary.org/obo/GO_0001773` -#### Removed -- [myeloid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0001773) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [myeloid dendritic cell](http://purl.obolibrary.org/obo/CL_0000782)) - -- [myeloid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0001773) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [myeloid dendritic cell](http://purl.obolibrary.org/obo/CL_0000782) - -#### Added -- [myeloid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0001773) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myeloid dendritic cell](http://purl.obolibrary.org/obo/CL_0000782)) - -- [myeloid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0001773) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myeloid dendritic cell](http://purl.obolibrary.org/obo/CL_0000782) - - -### myeloid leukocyte activation `http://purl.obolibrary.org/obo/GO_0002274` -#### Removed -- [myeloid leukocyte activation](http://purl.obolibrary.org/obo/GO_0002274) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [myeloid leukocyte](http://purl.obolibrary.org/obo/CL_0000766)) - -- [myeloid leukocyte activation](http://purl.obolibrary.org/obo/GO_0002274) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [myeloid leukocyte](http://purl.obolibrary.org/obo/CL_0000766) - -#### Added -- [myeloid leukocyte activation](http://purl.obolibrary.org/obo/GO_0002274) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myeloid leukocyte](http://purl.obolibrary.org/obo/CL_0000766)) - -- [myeloid leukocyte activation](http://purl.obolibrary.org/obo/GO_0002274) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myeloid leukocyte](http://purl.obolibrary.org/obo/CL_0000766) - - -### myoblast division `http://purl.obolibrary.org/obo/GO_0014872` -#### Removed -- [myoblast division](http://purl.obolibrary.org/obo/GO_0014872) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [myoblast](http://purl.obolibrary.org/obo/CL_0000056)) - -- [myoblast division](http://purl.obolibrary.org/obo/GO_0014872) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [myoblast](http://purl.obolibrary.org/obo/CL_0000056) - -#### Added -- [myoblast division](http://purl.obolibrary.org/obo/GO_0014872) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myoblast](http://purl.obolibrary.org/obo/CL_0000056)) - -- [myoblast division](http://purl.obolibrary.org/obo/GO_0014872) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [myoblast](http://purl.obolibrary.org/obo/CL_0000056) - - -### myocardium `http://purl.obolibrary.org/obo/UBERON_0002349` -#### Removed -- [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Glanzstreifen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - check 'Myocardum proper' in FMA. We superclass the more generic class for now. FMA has is_a muscle layer - should we add this? ZFA and BTO both have is_a 'cardiac muscle' (tissue?). But in U we also follow FMA and have cardiac muscle tissue of myocardium (there is also Fibrocollagenous connective tissue of myocardium), which would be identical (see issue-10). Note that GO also treats left/right ventricular cardiac muscle tissue synonymous with ventricular myocardium" - -#### Added -- [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - check 'Myocardum proper' in FMA. We superclass the more generic class for now. FMA has is_a muscle layer - should we add this? ZFA and BTO both have is_a 'cardiac muscle' (tissue?). But in U we also follow FMA and have cardiac muscle tissue of myocardium (there is also Fibrocollagenous connective tissue of myocardium), which would be identical (see issue-10). Note that GO also treats left/right ventricular cardiac muscle tissue synonymous with ventricular myocardium" - -- [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6e/Glanzstreifen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### myocardium trabecular layer `http://purl.obolibrary.org/obo/UBERON_0004124` -#### Removed -- [myocardium trabecular layer](http://purl.obolibrary.org/obo/UBERON_0004124) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "heart muscle trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [myocardium trabecular layer](http://purl.obolibrary.org/obo/UBERON_0004124) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "myocardial trabeculae carneae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [myocardium trabecular layer](http://purl.obolibrary.org/obo/UBERON_0004124) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "myocardial trabeculae carneae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [myocardium trabecular layer](http://purl.obolibrary.org/obo/UBERON_0004124) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "heart muscle trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### myometrium `http://purl.obolibrary.org/obo/UBERON_0001296` -#### Removed -- [myometrium](http://purl.obolibrary.org/obo/UBERON_0001296) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [myometrium](http://purl.obolibrary.org/obo/UBERON_0001296) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### myotome `http://purl.obolibrary.org/obo/UBERON_0003082` -#### Removed -- [myotome](http://purl.obolibrary.org/obo/UBERON_0003082) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [myotome](http://purl.obolibrary.org/obo/UBERON_0003082) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "myomeres" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001056" - -#### Added -- [myotome](http://purl.obolibrary.org/obo/UBERON_0003082) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [myotome](http://purl.obolibrary.org/obo/UBERON_0003082) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "myomeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001056" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nail plate `http://purl.obolibrary.org/obo/UBERON_0008198` -#### Removed -- [nail plate](http://purl.obolibrary.org/obo/UBERON_0008198) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9f/Fingernail_label.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nail plate](http://purl.obolibrary.org/obo/UBERON_0008198) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9f/Fingernail_label.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasal cartilage `http://purl.obolibrary.org/obo/UBERON_0001823` -#### Removed -- [nasal cartilage](http://purl.obolibrary.org/obo/UBERON_0001823) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasal cartilage](http://purl.obolibrary.org/obo/UBERON_0001823) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasal cavity `http://purl.obolibrary.org/obo/UBERON_0001707` -#### Removed -- [nasal cavity](http://purl.obolibrary.org/obo/UBERON_0001707) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasal cavity](http://purl.obolibrary.org/obo/UBERON_0001707) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasal mucus `http://purl.obolibrary.org/obo/UBERON_0002306` -#### Removed -- [nasal mucus](http://purl.obolibrary.org/obo/UBERON_0002306) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - split nasal vs respiratory tract?" - -#### Added -- [nasal mucus](http://purl.obolibrary.org/obo/UBERON_0002306) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - split nasal vs respiratory tract?" - - -### nasal vestibule `http://purl.obolibrary.org/obo/UBERON_0000402` -#### Removed -- [nasal vestibule](http://purl.obolibrary.org/obo/UBERON_0000402) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray994.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasal vestibule](http://purl.obolibrary.org/obo/UBERON_0000402) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7c/Gray994.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasal-associated lymphoid tissue `http://purl.obolibrary.org/obo/UBERON_0012330` -#### Removed -- [nasal-associated lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0012330) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NALT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mucosa-associated_lymphoid_tissue#Categorisation" - -#### Added -- [nasal-associated lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0012330) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NALT" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mucosa-associated_lymphoid_tissue#Categorisation" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### nasolacrimal duct `http://purl.obolibrary.org/obo/UBERON_0002392` -#### Removed -- [nasolacrimal duct](http://purl.obolibrary.org/obo/UBERON_0002392) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasolacrimal duct](http://purl.obolibrary.org/obo/UBERON_0002392) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasolacrimal groove `http://purl.obolibrary.org/obo/UBERON_0006266` -#### Removed -- [nasolacrimal groove](http://purl.obolibrary.org/obo/UBERON_0006266) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray163.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasolacrimal groove](http://purl.obolibrary.org/obo/UBERON_0006266) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray163.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nasopharynx `http://purl.obolibrary.org/obo/UBERON_0001728` -#### Removed -- [nasopharynx](http://purl.obolibrary.org/obo/UBERON_0001728) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Illu_pharynx.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nasopharynx](http://purl.obolibrary.org/obo/UBERON_0001728) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Illu_pharynx.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### natural killer cell activation `http://purl.obolibrary.org/obo/GO_0030101` -#### Removed -- [natural killer cell activation](http://purl.obolibrary.org/obo/GO_0030101) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [natural killer cell](http://purl.obolibrary.org/obo/CL_0000623)) - -- [natural killer cell activation](http://purl.obolibrary.org/obo/GO_0030101) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [natural killer cell](http://purl.obolibrary.org/obo/CL_0000623) - -#### Added -- [natural killer cell activation](http://purl.obolibrary.org/obo/GO_0030101) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [natural killer cell](http://purl.obolibrary.org/obo/CL_0000623)) - -- [natural killer cell activation](http://purl.obolibrary.org/obo/GO_0030101) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [natural killer cell](http://purl.obolibrary.org/obo/CL_0000623) - - -### neck `http://purl.obolibrary.org/obo/UBERON_0000974` -#### Removed -- [neck](http://purl.obolibrary.org/obo/UBERON_0000974) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/99/Female_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neck](http://purl.obolibrary.org/obo/UBERON_0000974) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) - -- [neck](http://purl.obolibrary.org/obo/UBERON_0000974) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Sarcopterygii](http://purl.obolibrary.org/obo/NCBITaxon_8287) - -#### Added -- [neck](http://purl.obolibrary.org/obo/UBERON_0000974) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/99/Female_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neck](http://purl.obolibrary.org/obo/UBERON_0000974) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [anterior region of body](http://purl.obolibrary.org/obo/UBERON_0000153) - - -### neck bone `http://purl.obolibrary.org/obo/UBERON_0003458` -#### Removed -- [neck bone](http://purl.obolibrary.org/obo/UBERON_0003458) SubClassOf [bone of craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007914) - -#### Added -- [neck bone](http://purl.obolibrary.org/obo/UBERON_0003458) SubClassOf [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) - - -### neck of femur `http://purl.obolibrary.org/obo/UBERON_0007119` -#### Removed -- [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neck of rib `http://purl.obolibrary.org/obo/UBERON_0003253` -#### Removed -- [neck of rib](http://purl.obolibrary.org/obo/UBERON_0003253) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neck of rib](http://purl.obolibrary.org/obo/UBERON_0003253) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neck of urinary bladder `http://purl.obolibrary.org/obo/UBERON_0001258` -#### Removed -- [neck of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001258) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray1156.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neck of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001258) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/63/Gray1156.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### negative regulation of cell projection organization `http://purl.obolibrary.org/obo/GO_0031345` -#### Removed -- [negative regulation of cell projection organization](http://purl.obolibrary.org/obo/GO_0031345) SubClassOf [negative regulation of cell population proliferation](http://purl.obolibrary.org/obo/GO_0008285) - - - -### negative regulation of macrophage migration `http://purl.obolibrary.org/obo/GO_1905522` -#### Removed -- [negative regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905522) SubClassOf [negative regulation of leukocyte migration](http://purl.obolibrary.org/obo/GO_0002686) - -#### Added -- [negative regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905522) SubClassOf [negative regulation of mononuclear cell migration](http://purl.obolibrary.org/obo/GO_0071676) - - -### neocortex `http://purl.obolibrary.org/obo/UBERON_0001950` -#### Removed -- [neocortex](http://purl.obolibrary.org/obo/UBERON_0001950) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Neocortex.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neocortex](http://purl.obolibrary.org/obo/UBERON_0001950) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Neocortex.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nephron `http://purl.obolibrary.org/obo/UBERON_0001285` -#### Removed -- [nephron](http://purl.obolibrary.org/obo/UBERON_0001285) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nephron](http://purl.obolibrary.org/obo/UBERON_0001285) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nerve `http://purl.obolibrary.org/obo/UBERON_0001021` -#### Removed -- [nerve](http://purl.obolibrary.org/obo/UBERON_0001021) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nerves" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0007009" - -#### Added -- [nerve](http://purl.obolibrary.org/obo/UBERON_0001021) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nerves" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0007009" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nerve fasciculus `http://purl.obolibrary.org/obo/UBERON_0001019` -#### Removed -- [nerve fasciculus](http://purl.obolibrary.org/obo/UBERON_0001019) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "note FBbt class not disjoint from tract. Consider merging with 'neuron projection bundle'" - -#### Added -- [nerve fasciculus](http://purl.obolibrary.org/obo/UBERON_0001019) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE note FBbt class not disjoint from tract. Consider merging with 'neuron projection bundle'" - - -### nerve fiber `http://purl.obolibrary.org/obo/UBERON_0006134` -#### Removed -- [nerve fiber](http://purl.obolibrary.org/obo/UBERON_0006134) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "nerve fibers" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:nfi" - -#### Added -- [nerve fiber](http://purl.obolibrary.org/obo/UBERON_0006134) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "nerve fibers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:nfi" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nerve fiber layer of retina `http://purl.obolibrary.org/obo/UBERON_0001793` -#### Removed -- [nerve fiber layer of retina](http://purl.obolibrary.org/obo/UBERON_0001793) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic fiber layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002212" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [nerve fiber layer of retina](http://purl.obolibrary.org/obo/UBERON_0001793) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic fiber layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002212" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nerve of cervical vertebra `http://purl.obolibrary.org/obo/UBERON_0000962` -#### Removed -- [nerve of cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0000962) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray795.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nerve of cervical vertebra](http://purl.obolibrary.org/obo/UBERON_0000962) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray795.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nerve of clitoris `http://purl.obolibrary.org/obo/UBERON_0035650` - -#### Added -- [nerve of clitoris](http://purl.obolibrary.org/obo/UBERON_0035650) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [nerve of clitoris](http://purl.obolibrary.org/obo/UBERON_0035650) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### nervous system `http://purl.obolibrary.org/obo/UBERON_0001016` -#### Removed -- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural arch `http://purl.obolibrary.org/obo/UBERON_0003861` -#### Removed -- [neural arch](http://purl.obolibrary.org/obo/UBERON_0003861) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neural arch](http://purl.obolibrary.org/obo/UBERON_0003861) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arcus vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vertebral_arch" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [neural arch](http://purl.obolibrary.org/obo/UBERON_0003861) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arcus vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vertebral_arch" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [neural arch](http://purl.obolibrary.org/obo/UBERON_0003861) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural crest `http://purl.obolibrary.org/obo/UBERON_0002342` -#### Removed -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000048" - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams)." - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [IAO_0000232](http://purl.obolibrary.org/obo/IAO_0000232) "EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams)." - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NC" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000048" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [neural crest](http://purl.obolibrary.org/obo/UBERON_0002342) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural crest derived fat cell `http://purl.obolibrary.org/obo/CL_0002333` -#### Removed -- [neural crest derived fat cell](http://purl.obolibrary.org/obo/CL_0002333) [label](http://www.w3.org/2000/01/rdf-schema#label) "neural crest derived fat cell" - -- [neural crest derived fat cell](http://purl.obolibrary.org/obo/CL_0002333) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell derived from a neural crest cell." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17507398" - -#### Added -- [neural crest derived fat cell](http://purl.obolibrary.org/obo/CL_0002333) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte derived from a neural crest cell." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17507398" - -- [neural crest derived fat cell](http://purl.obolibrary.org/obo/CL_0002333) [label](http://www.w3.org/2000/01/rdf-schema#label) "neural crest derived adipocyte" - - -### neural plate `http://purl.obolibrary.org/obo/UBERON_0003075` -#### Removed -- [neural plate](http://purl.obolibrary.org/obo/UBERON_0003075) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neural plate](http://purl.obolibrary.org/obo/UBERON_0003075) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural spine `http://purl.obolibrary.org/obo/UBERON_0001076` -#### Removed -- [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/48/Processusspinosusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "neural spines" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001336" - -#### Added -- [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "neural spines" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001336" - -- [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/48/Processusspinosusvertebrae.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural tube `http://purl.obolibrary.org/obo/UBERON_0001049` -#### Removed -- [neural tube](http://purl.obolibrary.org/obo/UBERON_0001049) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neural tube](http://purl.obolibrary.org/obo/UBERON_0001049) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neural tube alar plate `http://purl.obolibrary.org/obo/UBERON_0005882` -#### Removed -- [neural tube alar plate](http://purl.obolibrary.org/obo/UBERON_0005882) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray646.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neural tube alar plate](http://purl.obolibrary.org/obo/UBERON_0005882) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Gray646.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### neuroblast activation `http://purl.obolibrary.org/obo/GO_0007407` -#### Removed -- [neuroblast activation](http://purl.obolibrary.org/obo/GO_0007407) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - -- [neuroblast activation](http://purl.obolibrary.org/obo/GO_0007407) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031) - -#### Added -- [neuroblast activation](http://purl.obolibrary.org/obo/GO_0007407) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - -- [neuroblast activation](http://purl.obolibrary.org/obo/GO_0007407) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031) - - -### neuroblast division `http://purl.obolibrary.org/obo/GO_0055057` -#### Removed -- [neuroblast division](http://purl.obolibrary.org/obo/GO_0055057) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - -- [neuroblast division](http://purl.obolibrary.org/obo/GO_0055057) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031) - -#### Added -- [neuroblast division](http://purl.obolibrary.org/obo/GO_0055057) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031)) - -- [neuroblast division](http://purl.obolibrary.org/obo/GO_0055057) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neuroblast (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000031) - - -### neurocranial trabecula `http://purl.obolibrary.org/obo/UBERON_0005945` -#### Removed -- [neurocranial trabecula](http://purl.obolibrary.org/obo/UBERON_0005945) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neurocranial trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001321" - -#### Added -- [neurocranial trabecula](http://purl.obolibrary.org/obo/UBERON_0005945) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neurocranial trabeculae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001321" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### neuroendocrine system `http://purl.obolibrary.org/obo/UBERON_8600018` -#### Removed -- [neuroendocrine system](http://purl.obolibrary.org/obo/UBERON_8600018) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "NES" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:15481802" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [neuroendocrine system](http://purl.obolibrary.org/obo/UBERON_8600018) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "NES" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:15481802" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### neurogenic placode `http://purl.obolibrary.org/obo/UBERON_0009955` -#### Removed -- [neurogenic placode](http://purl.obolibrary.org/obo/UBERON_0009955) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neurogenic placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001309" - -#### Added -- [neurogenic placode](http://purl.obolibrary.org/obo/UBERON_0009955) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neurogenic placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001309" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### neurohypophysis `http://purl.obolibrary.org/obo/UBERON_0002198` -#### Removed -- [neurohypophysis](http://purl.obolibrary.org/obo/UBERON_0002198) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "NHP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1586" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [neurohypophysis](http://purl.obolibrary.org/obo/UBERON_0002198) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [neurohypophysis](http://purl.obolibrary.org/obo/UBERON_0002198) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [neurohypophysis](http://purl.obolibrary.org/obo/UBERON_0002198) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "NHP" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1586" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### neuromast `http://purl.obolibrary.org/obo/UBERON_0008904` -#### Removed -- [neuromast](http://purl.obolibrary.org/obo/UBERON_0008904) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromasts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000243" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [neuromast](http://purl.obolibrary.org/obo/UBERON_0008904) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006219" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [neuromast](http://purl.obolibrary.org/obo/UBERON_0008904) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromasts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000243" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### neuromere `http://purl.obolibrary.org/obo/UBERON_0004731` -#### Removed -- [neuromere](http://purl.obolibrary.org/obo/UBERON_0004731) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001328" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [neuromere](http://purl.obolibrary.org/obo/UBERON_0004731) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001328" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### neutrophil activation `http://purl.obolibrary.org/obo/GO_0042119` -#### Removed -- [neutrophil activation](http://purl.obolibrary.org/obo/GO_0042119) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [neutrophil](http://purl.obolibrary.org/obo/CL_0000775)) - -- [neutrophil activation](http://purl.obolibrary.org/obo/GO_0042119) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [neutrophil](http://purl.obolibrary.org/obo/CL_0000775) - -#### Added -- [neutrophil activation](http://purl.obolibrary.org/obo/GO_0042119) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neutrophil](http://purl.obolibrary.org/obo/CL_0000775)) - -- [neutrophil activation](http://purl.obolibrary.org/obo/GO_0042119) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [neutrophil](http://purl.obolibrary.org/obo/CL_0000775) - - -### nipple `http://purl.obolibrary.org/obo/UBERON_0002030` -#### Removed -- [nipple](http://purl.obolibrary.org/obo/UBERON_0002030) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/59/Female_nipple_profile.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nipple](http://purl.obolibrary.org/obo/UBERON_0002030) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/59/Female_nipple_profile.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nitric oxide production involved in inflammatory response `http://purl.obolibrary.org/obo/GO_0002537` -#### Removed -- [nitric oxide production involved in inflammatory response](http://purl.obolibrary.org/obo/GO_0002537) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480) - -#### Added -- [nitric oxide production involved in inflammatory response](http://purl.obolibrary.org/obo/GO_0002537) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480) - - -### norepinephrine binding `http://purl.obolibrary.org/obo/GO_0051380` -#### Removed -- [norepinephrine binding](http://purl.obolibrary.org/obo/GO_0051380) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - -- [norepinephrine binding](http://purl.obolibrary.org/obo/GO_0051380) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587) - -#### Added -- [norepinephrine binding](http://purl.obolibrary.org/obo/GO_0051380) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - -- [norepinephrine binding](http://purl.obolibrary.org/obo/GO_0051380) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587) - - -### nose `http://purl.obolibrary.org/obo/UBERON_0000004` -#### Removed -- [nose](http://purl.obolibrary.org/obo/UBERON_0000004) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d0/Canine-nose.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nose](http://purl.obolibrary.org/obo/UBERON_0000004) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d0/Canine-nose.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### notochord `http://purl.obolibrary.org/obo/UBERON_0002328` -#### Removed -- [notochord](http://purl.obolibrary.org/obo/UBERON_0002328) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [notochord](http://purl.obolibrary.org/obo/UBERON_0002328) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nuclear estrogen receptor binding `http://purl.obolibrary.org/obo/GO_0030331` -#### Removed -- [nuclear estrogen receptor binding](http://purl.obolibrary.org/obo/GO_0030331) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [estrogen receptor](http://purl.obolibrary.org/obo/PR_000007204)) - -- [nuclear estrogen receptor binding](http://purl.obolibrary.org/obo/GO_0030331) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [estrogen receptor](http://purl.obolibrary.org/obo/PR_000007204) - -#### Added -- [nuclear estrogen receptor binding](http://purl.obolibrary.org/obo/GO_0030331) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [estrogen receptor](http://purl.obolibrary.org/obo/PR_000007204)) - -- [nuclear estrogen receptor binding](http://purl.obolibrary.org/obo/GO_0030331) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [estrogen receptor](http://purl.obolibrary.org/obo/PR_000007204) - - -### nuclear glucocorticoid receptor activity `http://purl.obolibrary.org/obo/GO_0004883` -#### Removed -- [nuclear glucocorticoid receptor activity](http://purl.obolibrary.org/obo/GO_0004883) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - -- [nuclear glucocorticoid receptor activity](http://purl.obolibrary.org/obo/GO_0004883) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261) - -#### Added -- [nuclear glucocorticoid receptor activity](http://purl.obolibrary.org/obo/GO_0004883) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - -- [nuclear glucocorticoid receptor activity](http://purl.obolibrary.org/obo/GO_0004883) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261) - - -### nuclear membrane biogenesis `http://purl.obolibrary.org/obo/GO_0101025` -#### Removed -- [nuclear membrane biogenesis](http://purl.obolibrary.org/obo/GO_0101025) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [nuclear membrane](http://purl.obolibrary.org/obo/GO_0031965)) - -- [nuclear membrane biogenesis](http://purl.obolibrary.org/obo/GO_0101025) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [nuclear membrane](http://purl.obolibrary.org/obo/GO_0031965) - -#### Added -- [nuclear membrane biogenesis](http://purl.obolibrary.org/obo/GO_0101025) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [nuclear membrane](http://purl.obolibrary.org/obo/GO_0031965)) - -- [nuclear membrane biogenesis](http://purl.obolibrary.org/obo/GO_0101025) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [nuclear membrane](http://purl.obolibrary.org/obo/GO_0031965) - - -### nuclear steroid receptor activity `http://purl.obolibrary.org/obo/GO_0003707` -#### Removed -- [nuclear steroid receptor activity](http://purl.obolibrary.org/obo/GO_0003707) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [nuclear steroid receptor activity](http://purl.obolibrary.org/obo/GO_0003707) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - -#### Added -- [nuclear steroid receptor activity](http://purl.obolibrary.org/obo/GO_0003707) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [nuclear steroid receptor activity](http://purl.obolibrary.org/obo/GO_0003707) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - - -### nucleic acid binding `http://purl.obolibrary.org/obo/GO_0003676` -#### Removed -- [nucleic acid binding](http://purl.obolibrary.org/obo/GO_0003676) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696)) - -- [nucleic acid binding](http://purl.obolibrary.org/obo/GO_0003676) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696) - -#### Added -- [nucleic acid binding](http://purl.obolibrary.org/obo/GO_0003676) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696)) - -- [nucleic acid binding](http://purl.obolibrary.org/obo/GO_0003676) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33696](http://purl.obolibrary.org/obo/CHEBI_33696) - - -### nucleic acid metabolic process `http://purl.obolibrary.org/obo/GO_0090304` - -#### Added -- [nucleic acid metabolic process](http://purl.obolibrary.org/obo/GO_0090304) [term tracker item](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/geneontology/go-ontology/issues/26133"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### nucleologenesis `http://purl.obolibrary.org/obo/GO_0017126` -#### Removed -- [nucleologenesis](http://purl.obolibrary.org/obo/GO_0017126) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [nucleolus](http://purl.obolibrary.org/obo/GO_0005730)) - -- [nucleologenesis](http://purl.obolibrary.org/obo/GO_0017126) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [nucleolus](http://purl.obolibrary.org/obo/GO_0005730) - -#### Added -- [nucleologenesis](http://purl.obolibrary.org/obo/GO_0017126) EquivalentTo [cellular component biogenesis](http://purl.obolibrary.org/obo/GO_0044085) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [nucleolus](http://purl.obolibrary.org/obo/GO_0005730)) - -- [nucleologenesis](http://purl.obolibrary.org/obo/GO_0017126) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [nucleolus](http://purl.obolibrary.org/obo/GO_0005730) - - -### nucleus accumbens `http://purl.obolibrary.org/obo/UBERON_0001882` -#### Removed -- [nucleus accumbens](http://purl.obolibrary.org/obo/UBERON_0001882) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nucleus accumbens](http://purl.obolibrary.org/obo/UBERON_0001882) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [nucleus accumbens](http://purl.obolibrary.org/obo/UBERON_0001882) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [nucleus accumbens](http://purl.obolibrary.org/obo/UBERON_0001882) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### nucleus of brain `http://purl.obolibrary.org/obo/UBERON_0002308` -#### Removed -- [nucleus of brain](http://purl.obolibrary.org/obo/UBERON_0002308) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "brain nuclei" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005575" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [nucleus of brain](http://purl.obolibrary.org/obo/UBERON_0002308) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "brain nuclei" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005575" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nucleus of lateral olfactory tract `http://purl.obolibrary.org/obo/UBERON_0002893` -#### Removed -- [nucleus of lateral olfactory tract](http://purl.obolibrary.org/obo/UBERON_0002893) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NLOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [nucleus of lateral olfactory tract](http://purl.obolibrary.org/obo/UBERON_0002893) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "NLOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### nucleus of midbrain tegmentum `http://purl.obolibrary.org/obo/UBERON_0007414` -#### Removed -- [nucleus of midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0007414) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tegmental nuclei" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [nucleus of midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0007414) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tegmental nuclei" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### nucleus pulposus `http://purl.obolibrary.org/obo/UBERON_0002242` -#### Removed -- [nucleus pulposus](http://purl.obolibrary.org/obo/UBERON_0002242) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [nucleus pulposus](http://purl.obolibrary.org/obo/UBERON_0002242) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### obsolete kidney collecting duct beta-intercalated cell `http://purl.obolibrary.org/obo/CL_0700009` -#### Removed -- [obsolete kidney collecting duct beta-intercalated cell](http://purl.obolibrary.org/obo/CL_0700009) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### occipital artery `http://purl.obolibrary.org/obo/UBERON_0001613` -#### Removed -- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Gray508.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### occipital bone `http://purl.obolibrary.org/obo/UBERON_0001676` -#### Removed -- [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ocular adnexa `http://purl.obolibrary.org/obo/UBERON_0035639` -#### Removed -- [ocular adnexa](http://purl.obolibrary.org/obo/UBERON_0035639) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "appendages of the eye" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://medical-dictionary.thefreedictionary.com/ocular+adnexa" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [ocular adnexa](http://purl.obolibrary.org/obo/UBERON_0035639) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "appendages of the eye" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://medical-dictionary.thefreedictionary.com/ocular+adnexa" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### odontogenic papilla `http://purl.obolibrary.org/obo/UBERON_0001763` -#### Removed -- [odontogenic papilla](http://purl.obolibrary.org/obo/UBERON_0001763) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray1011.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [odontogenic papilla](http://purl.obolibrary.org/obo/UBERON_0001763) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/22/Gray1011.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### olfactory bulb `http://purl.obolibrary.org/obo/UBERON_0002264` -#### Removed -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f9/1543,Vesalius%27OlfactoryBulbs.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d2/1543%2CVesalius%27OlfactoryBulbs.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f9/1543,Vesalius%27OlfactoryBulbs.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d2/1543%2CVesalius%27OlfactoryBulbs.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0002264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### olfactory bulb external plexiform layer `http://purl.obolibrary.org/obo/UBERON_0005376` -#### Removed -- [olfactory bulb external plexiform layer](http://purl.obolibrary.org/obo/UBERON_0005376) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "EPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001319" - -#### Added -- [olfactory bulb external plexiform layer](http://purl.obolibrary.org/obo/UBERON_0005376) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "EPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001319" - - -### olfactory epithelium `http://purl.obolibrary.org/obo/UBERON_0001997` -#### Removed -- [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MOE" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBIBook:NBK55971" - -- [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray857.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray857.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "MOE" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCBIBook:NBK55971" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### olfactory nerve `http://purl.obolibrary.org/obo/UBERON_0001579` -#### Removed -- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "1n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1319" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray771.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray771.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "1n" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1319" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### olfactory placode `http://purl.obolibrary.org/obo/UBERON_0003050` -#### Removed -- [olfactory placode](http://purl.obolibrary.org/obo/UBERON_0003050) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "olfactory placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [olfactory placode](http://purl.obolibrary.org/obo/UBERON_0003050) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006222" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [olfactory placode](http://purl.obolibrary.org/obo/UBERON_0003050) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "olfactory placodes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### olfactory tract `http://purl.obolibrary.org/obo/UBERON_0002265` -#### Removed -- [olfactory tract](http://purl.obolibrary.org/obo/UBERON_0002265) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [olfactory tract](http://purl.obolibrary.org/obo/UBERON_0002265) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### olfactory tubercle `http://purl.obolibrary.org/obo/UBERON_0001883` -#### Removed -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [RO_0002174](http://purl.obolibrary.org/obo/RO_0002174) [Primates](http://purl.obolibrary.org/obo/NCBITaxon_9443) - - [editor_note](http://www.geneontology.org/formats/oboInOwl#editor_note) "check EHDAA2" - - - [source](http://www.geneontology.org/formats/oboInOwl#source) "MP" - -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [RO_0002174](http://purl.obolibrary.org/obo/RO_0002174) [Primates](http://purl.obolibrary.org/obo/NCBITaxon_9443) - - [source](http://www.geneontology.org/formats/oboInOwl#source) "MP" - - - [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE check EHDAA2" - -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### oligodendrocyte precursor cell `http://purl.obolibrary.org/obo/CL_0002453` -#### Removed -- [oligodendrocyte precursor cell](http://purl.obolibrary.org/obo/CL_0002453) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### ommatidium `http://purl.obolibrary.org/obo/UBERON_0000971` -#### Removed -- [ommatidium](http://purl.obolibrary.org/obo/UBERON_0000971) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "omatidia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [ommatidium](http://purl.obolibrary.org/obo/UBERON_0000971) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "omatidia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### onychocyte `http://purl.obolibrary.org/obo/CL_4033056` - -#### Added -- [onychocyte](http://purl.obolibrary.org/obo/CL_4033056) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [onychocyte](http://purl.obolibrary.org/obo/CL_4033056) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### ophthalmic artery `http://purl.obolibrary.org/obo/UBERON_0001619` -#### Removed -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0001619) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ophthalmic vein `http://purl.obolibrary.org/obo/UBERON_0011191` -#### Removed -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011191) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### optic chiasma `http://purl.obolibrary.org/obo/UBERON_0000959` -#### Removed -- [optic chiasma](http://purl.obolibrary.org/obo/UBERON_0000959) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/1543%2CVisalius%27OpticChiasma.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [optic chiasma](http://purl.obolibrary.org/obo/UBERON_0000959) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/1543%2CVisalius%27OpticChiasma.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### optic choroid `http://purl.obolibrary.org/obo/UBERON_0001776` -#### Removed -- [optic choroid](http://purl.obolibrary.org/obo/UBERON_0001776) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [optic choroid](http://purl.obolibrary.org/obo/UBERON_0001776) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### optic foramen `http://purl.obolibrary.org/obo/UBERON_0005745` -#### Removed -- [optic foramen](http://purl.obolibrary.org/obo/UBERON_0005745) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/8e/Orbita_mensch.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [optic foramen](http://purl.obolibrary.org/obo/UBERON_0005745) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/8e/Orbita_mensch.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### optic stalk `http://purl.obolibrary.org/obo/UBERON_0003098` -#### Removed -- [optic stalk](http://purl.obolibrary.org/obo/UBERON_0003098) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic stalk](http://purl.obolibrary.org/obo/UBERON_0003098) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic stalks" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000137" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [optic stalk](http://purl.obolibrary.org/obo/UBERON_0003098) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic stalk](http://purl.obolibrary.org/obo/UBERON_0003098) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic stalks" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000137" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### optic tract `http://purl.obolibrary.org/obo/UBERON_0001908` -#### Removed -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic tracts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000252" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray773.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -#### Added -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray773.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic tracts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000252" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [optic tract](http://purl.obolibrary.org/obo/UBERON_0001908) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### optic vesicle `http://purl.obolibrary.org/obo/UBERON_0004128` -#### Removed -- [optic vesicle](http://purl.obolibrary.org/obo/UBERON_0004128) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic vesicles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000050" - -- [optic vesicle](http://purl.obolibrary.org/obo/UBERON_0004128) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [optic vesicle](http://purl.obolibrary.org/obo/UBERON_0004128) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [optic vesicle](http://purl.obolibrary.org/obo/UBERON_0004128) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "optic vesicles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000050" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### orbital cavity `http://purl.obolibrary.org/obo/UBERON_0004867` -#### Removed -- [orbital cavity](http://purl.obolibrary.org/obo/UBERON_0004867) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "note that the AAO and ZFA class is a cavity" - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/462" - - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "AAO" - -#### Added -- [orbital cavity](http://purl.obolibrary.org/obo/UBERON_0004867) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "note that the AAO and ZFA class is a cavity" - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "AAO" - - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/462" - - -### orbitosphenoid `http://purl.obolibrary.org/obo/UBERON_0002478` -#### Removed -- [orbitosphenoid](http://purl.obolibrary.org/obo/UBERON_0002478) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [orbitosphenoid](http://purl.obolibrary.org/obo/UBERON_0002478) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "orbitosphenoids" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000253" - -#### Added -- [orbitosphenoid](http://purl.obolibrary.org/obo/UBERON_0002478) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "orbitosphenoids" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000253" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [orbitosphenoid](http://purl.obolibrary.org/obo/UBERON_0002478) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### organic acid binding `http://purl.obolibrary.org/obo/GO_0043177` -#### Removed -- [organic acid binding](http://purl.obolibrary.org/obo/GO_0043177) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64709](http://purl.obolibrary.org/obo/CHEBI_64709)) - -- [organic acid binding](http://purl.obolibrary.org/obo/GO_0043177) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64709](http://purl.obolibrary.org/obo/CHEBI_64709) - -#### Added -- [organic acid binding](http://purl.obolibrary.org/obo/GO_0043177) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64709](http://purl.obolibrary.org/obo/CHEBI_64709)) - -- [organic acid binding](http://purl.obolibrary.org/obo/GO_0043177) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64709](http://purl.obolibrary.org/obo/CHEBI_64709) - - -### organic cyclic compound binding `http://purl.obolibrary.org/obo/GO_0097159` -#### Removed -- [organic cyclic compound binding](http://purl.obolibrary.org/obo/GO_0097159) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - -- [organic cyclic compound binding](http://purl.obolibrary.org/obo/GO_0097159) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832) - -#### Added -- [organic cyclic compound binding](http://purl.obolibrary.org/obo/GO_0097159) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - -- [organic cyclic compound binding](http://purl.obolibrary.org/obo/GO_0097159) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832) - - -### ossification center `http://purl.obolibrary.org/obo/UBERON_0010355` -#### Removed -- [ossification center](http://purl.obolibrary.org/obo/UBERON_0010355) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fd/Gray79.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ossification center](http://purl.obolibrary.org/obo/UBERON_0010355) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fd/Gray79.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### osteoclast `http://purl.obolibrary.org/obo/CL_0000092` - -#### Added -- [osteoclast](http://purl.obolibrary.org/obo/CL_0000092) SubClassOf [phagocyte (sensu Vertebrata)](http://purl.obolibrary.org/obo/CL_0000518) - - -### osteoid `http://purl.obolibrary.org/obo/UBERON_0008883` -#### Removed -- [osteoid](http://purl.obolibrary.org/obo/UBERON_0008883) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9c/Active_osteoblasts.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [osteoid](http://purl.obolibrary.org/obo/UBERON_0008883) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9c/Active_osteoblasts.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### otic capsule `http://purl.obolibrary.org/obo/UBERON_0004637` - -#### Added -- [otic capsule](http://purl.obolibrary.org/obo/UBERON_0004637) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005981" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### otolith organ `http://purl.obolibrary.org/obo/UBERON_0002518` -#### Removed -- [otolith organ](http://purl.obolibrary.org/obo/UBERON_0002518) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [otolith organ](http://purl.obolibrary.org/obo/UBERON_0002518) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### outer limiting layer of retina `http://purl.obolibrary.org/obo/UBERON_0001788` -#### Removed -- [outer limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001788) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "outer limiting membranes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001331" - -- [outer limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001788) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "BRB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://github.com/obophenotype/mammalian-phenotype-ontology/issues/2109" - -#### Added -- [outer limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001788) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "BRB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://github.com/obophenotype/mammalian-phenotype-ontology/issues/2109" - -- [outer limiting layer of retina](http://purl.obolibrary.org/obo/UBERON_0001788) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "outer limiting membranes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001331" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### outer nuclear layer of retina `http://purl.obolibrary.org/obo/UBERON_0001789` -#### Removed -- [outer nuclear layer of retina](http://purl.obolibrary.org/obo/UBERON_0001789) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal outer nuclear layers" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001464" - -#### Added -- [outer nuclear layer of retina](http://purl.obolibrary.org/obo/UBERON_0001789) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal outer nuclear layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001464" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### outer plexiform layer of retina `http://purl.obolibrary.org/obo/UBERON_0001790` -#### Removed -- [outer plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001790) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal outer plexiform layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001330" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [outer plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001790) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "OPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [outer plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001790) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal outer plexiform layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001330" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [outer plexiform layer of retina](http://purl.obolibrary.org/obo/UBERON_0001790) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "OPL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### outflow part of left ventricle `http://purl.obolibrary.org/obo/UBERON_0005956` -#### Removed -- [outflow part of left ventricle](http://purl.obolibrary.org/obo/UBERON_0005956) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LVOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010429" - -#### Added -- [outflow part of left ventricle](http://purl.obolibrary.org/obo/UBERON_0005956) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "LVOT" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010429" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### outflow part of right ventricle `http://purl.obolibrary.org/obo/UBERON_0005953` -#### Removed -- [outflow part of right ventricle](http://purl.obolibrary.org/obo/UBERON_0005953) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "RVOT" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010428" - -#### Added -- [outflow part of right ventricle](http://purl.obolibrary.org/obo/UBERON_0005953) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "RVOT" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010428" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### ovarian artery `http://purl.obolibrary.org/obo/UBERON_0001190` -#### Removed -- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ovarian follicle `http://purl.obolibrary.org/obo/UBERON_0001305` -#### Removed -- [ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0001305) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0001305) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0001305) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0001305) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ovarian vein `http://purl.obolibrary.org/obo/UBERON_0001145` -#### Removed -- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Ovarschaf.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Ovarschaf.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ovary `http://purl.obolibrary.org/obo/UBERON_0000992` -#### Removed -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ovaries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ovaries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ovary](http://purl.obolibrary.org/obo/UBERON_0000992) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### ovary sex cord `http://purl.obolibrary.org/obo/UBERON_0005296` -#### Removed -- [ovary sex cord](http://purl.obolibrary.org/obo/UBERON_0005296) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ovigerous cords" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [ovary sex cord](http://purl.obolibrary.org/obo/UBERON_0005296) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ovigerous cords" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### oviduct `http://purl.obolibrary.org/obo/UBERON_0000993` -#### Removed -- [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "oviducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000560" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "oviducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000560" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### oxygen binding `http://purl.obolibrary.org/obo/GO_0019825` -#### Removed -- [oxygen binding](http://purl.obolibrary.org/obo/GO_0019825) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15379](http://purl.obolibrary.org/obo/CHEBI_15379)) - -- [oxygen binding](http://purl.obolibrary.org/obo/GO_0019825) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15379](http://purl.obolibrary.org/obo/CHEBI_15379) - -#### Added -- [oxygen binding](http://purl.obolibrary.org/obo/GO_0019825) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15379](http://purl.obolibrary.org/obo/CHEBI_15379)) - -- [oxygen binding](http://purl.obolibrary.org/obo/GO_0019825) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15379](http://purl.obolibrary.org/obo/CHEBI_15379) - - -### oxytocin receptor activity `http://purl.obolibrary.org/obo/GO_0004990` -#### Removed -- [oxytocin receptor activity](http://purl.obolibrary.org/obo/GO_0004990) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_7872](http://purl.obolibrary.org/obo/CHEBI_7872)) - -- [oxytocin receptor activity](http://purl.obolibrary.org/obo/GO_0004990) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_7872](http://purl.obolibrary.org/obo/CHEBI_7872) - -#### Added -- [oxytocin receptor activity](http://purl.obolibrary.org/obo/GO_0004990) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_7872](http://purl.obolibrary.org/obo/CHEBI_7872)) - -- [oxytocin receptor activity](http://purl.obolibrary.org/obo/GO_0004990) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_7872](http://purl.obolibrary.org/obo/CHEBI_7872) - - -### oxytocin receptor binding `http://purl.obolibrary.org/obo/GO_0031855` -#### Removed -- [oxytocin receptor binding](http://purl.obolibrary.org/obo/GO_0031855) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [oxytocin receptor](http://purl.obolibrary.org/obo/PR_000001635)) - -- [oxytocin receptor binding](http://purl.obolibrary.org/obo/GO_0031855) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [oxytocin receptor](http://purl.obolibrary.org/obo/PR_000001635) - -#### Added -- [oxytocin receptor binding](http://purl.obolibrary.org/obo/GO_0031855) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [oxytocin receptor](http://purl.obolibrary.org/obo/PR_000001635)) - -- [oxytocin receptor binding](http://purl.obolibrary.org/obo/GO_0031855) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [oxytocin receptor](http://purl.obolibrary.org/obo/PR_000001635) - - -### palatal tooth `http://purl.obolibrary.org/obo/UBERON_0012070` -#### Removed -- [palatal tooth](http://purl.obolibrary.org/obo/UBERON_0012070) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "palatal teeth" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [palatal tooth](http://purl.obolibrary.org/obo/UBERON_0012070) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "palatal teeth" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### palpebral vein `http://purl.obolibrary.org/obo/UBERON_0014769` -#### Removed -- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "palpebral veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "palpebral veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pampiniform plexus `http://purl.obolibrary.org/obo/UBERON_0001330` -#### Removed -- [pampiniform plexus](http://purl.obolibrary.org/obo/UBERON_0001330) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray1147.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pampiniform plexus](http://purl.obolibrary.org/obo/UBERON_0001330) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray1147.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pancreas `http://purl.obolibrary.org/obo/UBERON_0001264` -#### Removed -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pancreas.glb" - -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pancreas.glb" - -#### Added -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pancreas.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pancreas.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pancreas primordium `http://purl.obolibrary.org/obo/UBERON_0003921` -#### Removed -- [pancreas primordium](http://purl.obolibrary.org/obo/UBERON_0003921) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pancreas primordium](http://purl.obolibrary.org/obo/UBERON_0003921) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pancreatic acinus `http://purl.obolibrary.org/obo/UBERON_0001263` -#### Removed -- [pancreatic acinus](http://purl.obolibrary.org/obo/UBERON_0001263) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pancreatic acini" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pancreatic acinus](http://purl.obolibrary.org/obo/UBERON_0001263) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pancreatic acini" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pancreatic duct `http://purl.obolibrary.org/obo/UBERON_0007329` -#### Removed -- [pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0007329) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0007329) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pancreatic epithelial bud `http://purl.obolibrary.org/obo/UBERON_0003922` -#### Removed -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pancreatic buds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001390" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pancreatic buds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001390" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pancreatic epithelial bud](http://purl.obolibrary.org/obo/UBERON_0003922) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### papillary layer of dermis `http://purl.obolibrary.org/obo/UBERON_0001992` -#### Removed -- [papillary layer of dermis](http://purl.obolibrary.org/obo/UBERON_0001992) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [papillary layer of dermis](http://purl.obolibrary.org/obo/UBERON_0001992) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b4/Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### paraaortic body `http://purl.obolibrary.org/obo/UBERON_0001237` -#### Removed -- [paraaortic body](http://purl.obolibrary.org/obo/UBERON_0001237) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paraaortic body](http://purl.obolibrary.org/obo/UBERON_0001237) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paraganglia of Zuckerkandl" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [paraaortic body](http://purl.obolibrary.org/obo/UBERON_0001237) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paraaortic body](http://purl.obolibrary.org/obo/UBERON_0001237) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paraganglia of Zuckerkandl" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### paraganglion (generic) `http://purl.obolibrary.org/obo/UBERON_0034978` -#### Removed -- [paraganglion (generic)](http://purl.obolibrary.org/obo/UBERON_0034978) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paraganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [paraganglion (generic)](http://purl.obolibrary.org/obo/UBERON_0034978) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paraganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### parasympathetic ganglion `http://purl.obolibrary.org/obo/UBERON_0001808` -#### Removed -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### parasympathetic nervous system `http://purl.obolibrary.org/obo/UBERON_0000011` -#### Removed -- [parasympathetic nervous system](http://purl.obolibrary.org/obo/UBERON_0000011) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [parasympathetic nervous system](http://purl.obolibrary.org/obo/UBERON_0000011) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### paraventricular nucleus of hypothalamus `http://purl.obolibrary.org/obo/UBERON_0001930` -#### Removed -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/en/thumb/e/ef/PVNss.jpg/200px-PVNss.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Pa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1407" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ef/PVNss.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/en/thumb/e/ef/PVNss.jpg/200px-PVNss.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ef/PVNss.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paraventricular nucleus of hypothalamus](http://purl.obolibrary.org/obo/UBERON_0001930) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Pa" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1407" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### paravertebral ganglion `http://purl.obolibrary.org/obo/UBERON_0001807` -#### Removed -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paravertebral ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:80128" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sympathetic chain ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Paravertebral_ganglia" - -#### Added -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sympathetic chain ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Paravertebral_ganglia" - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "paravertebral ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:80128" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [paravertebral ganglion](http://purl.obolibrary.org/obo/UBERON_0001807) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### paraxial mesoderm `http://purl.obolibrary.org/obo/UBERON_0003077` -#### Removed -- [paraxial mesoderm](http://purl.obolibrary.org/obo/UBERON_0003077) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [paraxial mesoderm](http://purl.obolibrary.org/obo/UBERON_0003077) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### parenchyma `http://purl.obolibrary.org/obo/UBERON_0000353` - -#### Added -- [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001539" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### parietal lobe `http://purl.obolibrary.org/obo/UBERON_0001872` -#### Removed -- [parietal lobe](http://purl.obolibrary.org/obo/UBERON_0001872) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray726_parietal_lobe.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [parietal lobe](http://purl.obolibrary.org/obo/UBERON_0001872) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray726_parietal_lobe.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### parietal peritoneum `http://purl.obolibrary.org/obo/UBERON_0001366` -#### Removed -- [parietal peritoneum](http://purl.obolibrary.org/obo/UBERON_0001366) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [parietal peritoneum](http://purl.obolibrary.org/obo/UBERON_0001366) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### parietal serous pericardium `http://purl.obolibrary.org/obo/UBERON_0002408` -#### Removed -- [parietal serous pericardium](http://purl.obolibrary.org/obo/UBERON_0002408) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [parietal serous pericardium](http://purl.obolibrary.org/obo/UBERON_0002408) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pars distalis of adenohypophysis `http://purl.obolibrary.org/obo/UBERON_0006964` -#### Removed -- [pars distalis of adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0006964) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DHP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1022" - -#### Added -- [pars distalis of adenohypophysis](http://purl.obolibrary.org/obo/UBERON_0006964) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "DHP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1022" - - -### patella `http://purl.obolibrary.org/obo/UBERON_0002446` -#### Removed -- [patella](http://purl.obolibrary.org/obo/UBERON_0002446) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [patella](http://purl.obolibrary.org/obo/UBERON_0002446) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pectinate line `http://purl.obolibrary.org/obo/UBERON_0006574` -#### Removed -- [pectinate line](http://purl.obolibrary.org/obo/UBERON_0006574) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Hemorrhoid.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pectinate line](http://purl.obolibrary.org/obo/UBERON_0006574) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7b/Hemorrhoid.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pectoral appendage bud `http://purl.obolibrary.org/obo/UBERON_0005419` -#### Removed -- [pectoral appendage bud](http://purl.obolibrary.org/obo/UBERON_0005419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pectoral fin buds" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000141" - -#### Added -- [pectoral appendage bud](http://purl.obolibrary.org/obo/UBERON_0005419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pectoral fin buds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000141" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pectoral girdle skeleton `http://purl.obolibrary.org/obo/UBERON_0007831` -#### Removed -- [pectoral girdle skeleton](http://purl.obolibrary.org/obo/UBERON_0007831) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/22/Pectoral_girdle_front_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pectoral girdle skeleton](http://purl.obolibrary.org/obo/UBERON_0007831) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/22/Pectoral_girdle_front_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pectoral lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0001425` -#### Removed -- [pectoral lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [pectoral lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001425) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PL" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### pectoral muscle `http://purl.obolibrary.org/obo/UBERON_0001495` -#### Removed -- [pectoral muscle](http://purl.obolibrary.org/obo/UBERON_0001495) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/6c/Pectoralis_major.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pectoral muscle](http://purl.obolibrary.org/obo/UBERON_0001495) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/6c/Pectoralis_major.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pectoralis major `http://purl.obolibrary.org/obo/UBERON_0002381` -#### Removed -- [pectoralis major](http://purl.obolibrary.org/obo/UBERON_0002381) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/6c/Pectoralis_major.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pectoralis major](http://purl.obolibrary.org/obo/UBERON_0002381) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/6c/Pectoralis_major.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pectoralis minor `http://purl.obolibrary.org/obo/UBERON_0001100` -#### Removed -- [pectoralis minor](http://purl.obolibrary.org/obo/UBERON_0001100) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/5d/Pectoralis_minor.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pectoralis minor](http://purl.obolibrary.org/obo/UBERON_0001100) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/5d/Pectoralis_minor.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pedal digit `http://purl.obolibrary.org/obo/UBERON_0001466` -#### Removed -- [pedal digit](http://purl.obolibrary.org/obo/UBERON_0001466) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Toes.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pedal digit](http://purl.obolibrary.org/obo/UBERON_0001466) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "digiti pedis" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:70664" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -#### Added -- [pedal digit](http://purl.obolibrary.org/obo/UBERON_0001466) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "digiti pedis" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:70664" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [pedal digit](http://purl.obolibrary.org/obo/UBERON_0001466) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Toes.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pelvic appendage bud `http://purl.obolibrary.org/obo/UBERON_0005420` -#### Removed -- [pelvic appendage bud](http://purl.obolibrary.org/obo/UBERON_0005420) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pelvic fin buds" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001384" - -#### Added -- [pelvic appendage bud](http://purl.obolibrary.org/obo/UBERON_0005420) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pelvic fin buds" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001384" - - -### pelvic cavity `http://purl.obolibrary.org/obo/UBERON_0008203` -#### Removed -- [pelvic cavity](http://purl.obolibrary.org/obo/UBERON_0008203) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pelvic cavity](http://purl.obolibrary.org/obo/UBERON_0008203) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pelvic girdle skeleton `http://purl.obolibrary.org/obo/UBERON_0007832` -#### Removed -- [pelvic girdle skeleton](http://purl.obolibrary.org/obo/UBERON_0007832) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pelvic girdle skeleton](http://purl.obolibrary.org/obo/UBERON_0007832) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### penis `http://purl.obolibrary.org/obo/UBERON_0000989` -#### Removed -- [penis](http://purl.obolibrary.org/obo/UBERON_0000989) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/87/Labelled_flaccid_penis.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [penis](http://purl.obolibrary.org/obo/UBERON_0000989) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "penes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [penis](http://purl.obolibrary.org/obo/UBERON_0000989) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "penes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [penis](http://purl.obolibrary.org/obo/UBERON_0000989) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/87/Labelled_flaccid_penis.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### peptide binding `http://purl.obolibrary.org/obo/GO_0042277` -#### Removed -- [peptide binding](http://purl.obolibrary.org/obo/GO_0042277) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [peptide binding](http://purl.obolibrary.org/obo/GO_0042277) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - -#### Added -- [peptide binding](http://purl.obolibrary.org/obo/GO_0042277) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [peptide binding](http://purl.obolibrary.org/obo/GO_0042277) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - - -### peptide hormone binding `http://purl.obolibrary.org/obo/GO_0017046` -#### Removed -- [peptide hormone binding](http://purl.obolibrary.org/obo/GO_0017046) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - -- [peptide hormone binding](http://purl.obolibrary.org/obo/GO_0017046) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905) - -#### Added -- [peptide hormone binding](http://purl.obolibrary.org/obo/GO_0017046) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - -- [peptide hormone binding](http://purl.obolibrary.org/obo/GO_0017046) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905) - - -### peptide receptor activity `http://purl.obolibrary.org/obo/GO_0001653` -#### Removed -- [peptide receptor activity](http://purl.obolibrary.org/obo/GO_0001653) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [peptide receptor activity](http://purl.obolibrary.org/obo/GO_0001653) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - -#### Added -- [peptide receptor activity](http://purl.obolibrary.org/obo/GO_0001653) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [peptide receptor activity](http://purl.obolibrary.org/obo/GO_0001653) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - - -### peptidyl-amino acid modification `http://purl.obolibrary.org/obo/GO_0018193` -#### Removed -- [peptidyl-amino acid modification](http://purl.obolibrary.org/obo/GO_0018193) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33708](http://purl.obolibrary.org/obo/CHEBI_33708) - -#### Added -- [peptidyl-amino acid modification](http://purl.obolibrary.org/obo/GO_0018193) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33708](http://purl.obolibrary.org/obo/CHEBI_33708) - - -### periarterial lymphatic sheath `http://purl.obolibrary.org/obo/UBERON_0001960` -#### Removed -- [periarterial lymphatic sheath](http://purl.obolibrary.org/obo/UBERON_0001960) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "PALS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002358" - -#### Added -- [periarterial lymphatic sheath](http://purl.obolibrary.org/obo/UBERON_0001960) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "PALS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002358" - - -### pericardial sac `http://purl.obolibrary.org/obo/UBERON_0002406` -#### Removed -- [pericardial sac](http://purl.obolibrary.org/obo/UBERON_0002406) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pericardial sac](http://purl.obolibrary.org/obo/UBERON_0002406) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pericardium `http://purl.obolibrary.org/obo/UBERON_0002407` -#### Removed -- [pericardium](http://purl.obolibrary.org/obo/UBERON_0002407) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pericardium](http://purl.obolibrary.org/obo/UBERON_0002407) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pericardium](http://purl.obolibrary.org/obo/UBERON_0002407) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [pericardium](http://purl.obolibrary.org/obo/UBERON_0002407) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### perichordal bone `http://purl.obolibrary.org/obo/UBERON_0008909` -#### Removed -- [perichordal bone](http://purl.obolibrary.org/obo/UBERON_0008909) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "perichordal bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001629" - -#### Added -- [perichordal bone](http://purl.obolibrary.org/obo/UBERON_0008909) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "perichordal bones" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001629" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### periderm `http://purl.obolibrary.org/obo/UBERON_0003055` - -#### Added -- [periderm](http://purl.obolibrary.org/obo/UBERON_0003055) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003377" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### perineurium `http://purl.obolibrary.org/obo/UBERON_0000121` -#### Removed -- [perineurium](http://purl.obolibrary.org/obo/UBERON_0000121) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [perineurium](http://purl.obolibrary.org/obo/UBERON_0000121) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray636.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### periodontal ligament `http://purl.obolibrary.org/obo/UBERON_0008266` -#### Removed -- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### periodontium `http://purl.obolibrary.org/obo/UBERON_0001758` -#### Removed -- [periodontium](http://purl.obolibrary.org/obo/UBERON_0001758) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [periodontium](http://purl.obolibrary.org/obo/UBERON_0001758) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### periosteum `http://purl.obolibrary.org/obo/UBERON_0002515` -#### Removed -- [periosteum](http://purl.obolibrary.org/obo/UBERON_0002515) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cf/Bone_growth.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [periosteum](http://purl.obolibrary.org/obo/UBERON_0002515) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cf/Bone_growth.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### peripheral blood lymphocyte `http://purl.obolibrary.org/obo/CL_4030030` -#### Removed -- [peripheral blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030030) [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) [1725](https://github.com/obophenotype/cell-ontology/pull/1725) - -- [peripheral blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030030) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A blood lymphocyte located in the flowing, circulating blood of the body." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31092833" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [X](https://orcid.org/0000-0003-2534-198X) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [what-peripheral-blood-4672930.html](https://sciencing.com/what-peripheral-blood-4672930.html) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [0000-0001-9990-8331](https://orcid.org/0000-0001-9990-8331) - -- [peripheral blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030030) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - -#### Added -- [peripheral blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030030) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A blood lymphocyte located in the flowing, circulating blood of the body." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31092833" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [X](https://orcid.org/0000-0003-2534-198X) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) [0000-0001-9990-8331](https://orcid.org/0000-0001-9990-8331) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://sciencing.com/what-peripheral-blood-4672930.html" - -- [peripheral blood lymphocyte](http://purl.obolibrary.org/obo/CL_4030030) [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/cell-ontology/pull/1725" - - -### peripheral nervous system `http://purl.obolibrary.org/obo/UBERON_0000010` -#### Removed -- [peripheral nervous system](http://purl.obolibrary.org/obo/UBERON_0000010) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [peripheral nervous system](http://purl.obolibrary.org/obo/UBERON_0000010) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PNS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [peripheral nervous system](http://purl.obolibrary.org/obo/UBERON_0000010) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [peripheral nervous system](http://purl.obolibrary.org/obo/UBERON_0000010) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PNS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### perirenal adipocyte `http://purl.obolibrary.org/obo/CL_0002616` -#### Removed -- [perirenal adipocyte](http://purl.obolibrary.org/obo/CL_0002616) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell of perirenal fat tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -#### Added -- [perirenal adipocyte](http://purl.obolibrary.org/obo/CL_0002616) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte of perirenal fat tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - -### perirenal fat `http://purl.obolibrary.org/obo/UBERON_0005406` -#### Removed -- [perirenal fat](http://purl.obolibrary.org/obo/UBERON_0005406) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [perirenal fat](http://purl.obolibrary.org/obo/UBERON_0005406) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### peritoneum `http://purl.obolibrary.org/obo/UBERON_0002358` -#### Removed -- [peritoneum](http://purl.obolibrary.org/obo/UBERON_0002358) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [peritoneum](http://purl.obolibrary.org/obo/UBERON_0002358) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### peritubular capillary endothelial cell `http://purl.obolibrary.org/obo/CL_1001033` -#### Removed -- [peritubular capillary endothelial cell](http://purl.obolibrary.org/obo/CL_1001033) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [peritubular capillary](http://purl.obolibrary.org/obo/UBERON_0005272) - -#### Added -- [peritubular capillary endothelial cell](http://purl.obolibrary.org/obo/CL_1001033) SubClassOf [capillary endothelial cell](http://purl.obolibrary.org/obo/CL_0002144) - -- [peritubular capillary endothelial cell](http://purl.obolibrary.org/obo/CL_1001033) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [endothelium of peritubular capillary](http://purl.obolibrary.org/obo/UBERON_0012441) - - -### perivascular space `http://purl.obolibrary.org/obo/UBERON_0014930` -#### Removed -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "perivascular spaces" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "VRS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Virchow-Robin_space" - -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://static-content.springer.com/image/art%3A10.1007%2Fs11064-015-1581-6/MediaObjects/11064_2015_1581_Fig3_HTML.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "VRS" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Virchow-Robin_space" - -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "perivascular spaces" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [perivascular space](http://purl.obolibrary.org/obo/UBERON_0014930) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://static-content.springer.com/image/art%3A10.1007%2Fs11064-015-1581-6/MediaObjects/11064_2015_1581_Fig3_HTML.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### periventricular nucleus `http://purl.obolibrary.org/obo/UBERON_0002322` -#### Removed -- [periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002322) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "periventricular nuclei" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000260" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002322) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "periventricular nuclei" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000260" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pes `http://purl.obolibrary.org/obo/UBERON_0002387` -#### Removed -- [pes](http://purl.obolibrary.org/obo/UBERON_0002387) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ae/Male_Right_Foot_1.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pes](http://purl.obolibrary.org/obo/UBERON_0002387) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "hindfeet" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pes](http://purl.obolibrary.org/obo/UBERON_0002387) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "hindfeet" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pes](http://purl.obolibrary.org/obo/UBERON_0002387) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ae/Male_Right_Foot_1.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pes joint `http://purl.obolibrary.org/obo/UBERON_0001487` -#### Removed -- [pes joint](http://purl.obolibrary.org/obo/UBERON_0001487) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "joints of foot" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71349" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pes joint](http://purl.obolibrary.org/obo/UBERON_0001487) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "joints of foot" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71349" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### petrous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_0001694` -#### Removed -- [petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_0001694) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_0001694) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### phalanx `http://purl.obolibrary.org/obo/UBERON_0003221` -#### Removed -- [phalanx](http://purl.obolibrary.org/obo/UBERON_0003221) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "phalanges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [phalanx](http://purl.obolibrary.org/obo/UBERON_0003221) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "phalanges" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### phalanx of manus `http://purl.obolibrary.org/obo/UBERON_0001436` -#### Removed -- [phalanx of manus](http://purl.obolibrary.org/obo/UBERON_0001436) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "phalanges of fore digit" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000947" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [phalanx of manus](http://purl.obolibrary.org/obo/UBERON_0001436) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "phalanges of fore digit" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000947" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### phalanx of pes `http://purl.obolibrary.org/obo/UBERON_0001449` -#### Removed -- [phalanx of pes](http://purl.obolibrary.org/obo/UBERON_0001449) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "phalanges of hind digit" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000930" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [phalanx of pes](http://purl.obolibrary.org/obo/UBERON_0001449) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "phalanges of hind digit" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AAO:0000930" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal arch `http://purl.obolibrary.org/obo/UBERON_0002539` -#### Removed -- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal arches" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal arches" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pharyngeal arch 1 `http://purl.obolibrary.org/obo/UBERON_0004362` -#### Removed -- [pharyngeal arch 1](http://purl.obolibrary.org/obo/UBERON_0004362) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pharyngeal arch 1](http://purl.obolibrary.org/obo/UBERON_0004362) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pharyngeal arch 2 `http://purl.obolibrary.org/obo/UBERON_0003066` -#### Removed -- [pharyngeal arch 2](http://purl.obolibrary.org/obo/UBERON_0003066) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pharyngeal arch 2](http://purl.obolibrary.org/obo/UBERON_0003066) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_0004363` -#### Removed -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "branchial aortic arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005004" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFIN:ZDB-PUB-080512-6" - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial aortic arches" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFIN:ZDB-PUB-080512-6" - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "PAA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002672" - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "aortic arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005004" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pharyngeal arch arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "PAA" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002672" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial aortic arches" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFIN:ZDB-PUB-080512-6" - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "aortic arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005004" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "branchial aortic arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005004" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFIN:ZDB-PUB-080512-6" - -- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pharyngeal arch arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal arch cartilage `http://purl.obolibrary.org/obo/UBERON_0011004` -#### Removed -- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal arch cartilages" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001460" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006051" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal arch cartilages" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001460" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal cleft `http://purl.obolibrary.org/obo/UBERON_0005879` -#### Removed -- [pharyngeal cleft](http://purl.obolibrary.org/obo/UBERON_0005879) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Kiemenbogen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pharyngeal cleft](http://purl.obolibrary.org/obo/UBERON_0005879) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Kiemenbogen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pharyngeal pouch 1 `http://purl.obolibrary.org/obo/UBERON_0007122` -#### Removed -- [pharyngeal pouch 1](http://purl.obolibrary.org/obo/UBERON_0007122) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 1" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001128" - -#### Added -- [pharyngeal pouch 1](http://purl.obolibrary.org/obo/UBERON_0007122) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 1" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001128" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal pouch 2 `http://purl.obolibrary.org/obo/UBERON_0007123` -#### Removed -- [pharyngeal pouch 2](http://purl.obolibrary.org/obo/UBERON_0007123) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 2" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001130" - -#### Added -- [pharyngeal pouch 2](http://purl.obolibrary.org/obo/UBERON_0007123) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 2" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001130" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal pouch 3 `http://purl.obolibrary.org/obo/UBERON_0007124` -#### Removed -- [pharyngeal pouch 3](http://purl.obolibrary.org/obo/UBERON_0007124) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 3" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001131" - -#### Added -- [pharyngeal pouch 3](http://purl.obolibrary.org/obo/UBERON_0007124) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 3" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001131" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharyngeal pouch 4 `http://purl.obolibrary.org/obo/UBERON_0007125` -#### Removed -- [pharyngeal pouch 4](http://purl.obolibrary.org/obo/UBERON_0007125) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 4" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001134" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pharyngeal pouch 4](http://purl.obolibrary.org/obo/UBERON_0007125) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pharyngeal pouches 4" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001134" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pharynx `http://purl.obolibrary.org/obo/UBERON_0006562` -#### Removed -- [pharynx](http://purl.obolibrary.org/obo/UBERON_0006562) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00005380" - - - -### photoreceptor layer of retina `http://purl.obolibrary.org/obo/UBERON_0001787` -#### Removed -- [photoreceptor layer of retina](http://purl.obolibrary.org/obo/UBERON_0001787) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal photoreceptor layers" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000143" - -- [photoreceptor layer of retina](http://purl.obolibrary.org/obo/UBERON_0001787) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [photoreceptor layer of retina](http://purl.obolibrary.org/obo/UBERON_0001787) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [photoreceptor layer of retina](http://purl.obolibrary.org/obo/UBERON_0001787) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinal photoreceptor layers" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000143" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### phrenic nerve `http://purl.obolibrary.org/obo/UBERON_0001884` -#### Removed -- [phrenic nerve](http://purl.obolibrary.org/obo/UBERON_0001884) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3c/Gray806.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [phrenic nerve](http://purl.obolibrary.org/obo/UBERON_0001884) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3c/Gray806.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pia mater `http://purl.obolibrary.org/obo/UBERON_0002361` -#### Removed -- [pia mater](http://purl.obolibrary.org/obo/UBERON_0002361) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray770.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pia mater](http://purl.obolibrary.org/obo/UBERON_0002361) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray770-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pia mater](http://purl.obolibrary.org/obo/UBERON_0002361) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray770-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pia mater](http://purl.obolibrary.org/obo/UBERON_0002361) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/65/Gray770.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pigmented layer of retina `http://purl.obolibrary.org/obo/UBERON_0001782` -#### Removed -- [pigmented layer of retina](http://purl.obolibrary.org/obo/UBERON_0001782) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pigmented layer of retina](http://purl.obolibrary.org/obo/UBERON_0001782) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pineal body `http://purl.obolibrary.org/obo/UBERON_0001905` -#### Removed -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Pi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1184" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) SubClassOf [capable of](http://purl.obolibrary.org/obo/RO_0002215) some [melatonin biosynthetic process](http://purl.obolibrary.org/obo/GO_0030187) - - [editor_note](http://www.geneontology.org/formats/oboInOwl#editor_note) "add secretion" - -#### Added -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Pi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1184" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Illu_pituitary_pineal_glands.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905) SubClassOf [capable of](http://purl.obolibrary.org/obo/RO_0002215) some [melatonin biosynthetic process](http://purl.obolibrary.org/obo/GO_0030187) - - [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE add secretion" - - -### pinna `http://purl.obolibrary.org/obo/UBERON_0001757` -#### Removed -- [pinna](http://purl.obolibrary.org/obo/UBERON_0001757) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pinnae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pinna](http://purl.obolibrary.org/obo/UBERON_0001757) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pinnae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### piriform cortex `http://purl.obolibrary.org/obo/UBERON_0004725` -#### Removed -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [piriform cortex](http://purl.obolibrary.org/obo/UBERON_0004725) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pituitary gland `http://purl.obolibrary.org/obo/UBERON_0000007` -#### Removed -- [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Hp" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1353" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Hp" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1353" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### placenta `http://purl.obolibrary.org/obo/UBERON_0001987` -#### Removed -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f1/Placenta.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" - -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Placenta.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Placenta.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [placenta](http://purl.obolibrary.org/obo/UBERON_0001987) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f1/Placenta.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### placenta blood vessel `http://purl.obolibrary.org/obo/UBERON_0022358` - -#### Added -- [placenta blood vessel](http://purl.obolibrary.org/obo/UBERON_0022358) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [placenta blood vessel](http://purl.obolibrary.org/obo/UBERON_0022358) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### placental labyrinth villous `http://purl.obolibrary.org/obo/UBERON_0010005` -#### Removed -- [placental labyrinth villous](http://purl.obolibrary.org/obo/UBERON_0010005) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "placental labyrinth villi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [placental labyrinth villous](http://purl.obolibrary.org/obo/UBERON_0010005) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "placental labyrinth villi" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### plantar part of pes `http://purl.obolibrary.org/obo/UBERON_0008338` -#### Removed -- [plantar part of pes](http://purl.obolibrary.org/obo/UBERON_0008338) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/41/Soles2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [plantar part of pes](http://purl.obolibrary.org/obo/UBERON_0008338) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/41/Soles2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### plasmacytoid dendritic cell activation `http://purl.obolibrary.org/obo/GO_0002270` -#### Removed -- [plasmacytoid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002270) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [plasmacytoid dendritic cell](http://purl.obolibrary.org/obo/CL_0000784)) - -- [plasmacytoid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002270) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [plasmacytoid dendritic cell](http://purl.obolibrary.org/obo/CL_0000784) - -#### Added -- [plasmacytoid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002270) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [plasmacytoid dendritic cell](http://purl.obolibrary.org/obo/CL_0000784)) - -- [plasmacytoid dendritic cell activation](http://purl.obolibrary.org/obo/GO_0002270) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [plasmacytoid dendritic cell](http://purl.obolibrary.org/obo/CL_0000784) - - -### platelet activation `http://purl.obolibrary.org/obo/GO_0030168` -#### Removed -- [platelet activation](http://purl.obolibrary.org/obo/GO_0030168) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [platelet](http://purl.obolibrary.org/obo/CL_0000233)) - -- [platelet activation](http://purl.obolibrary.org/obo/GO_0030168) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [platelet](http://purl.obolibrary.org/obo/CL_0000233) - -#### Added -- [platelet activation](http://purl.obolibrary.org/obo/GO_0030168) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [platelet](http://purl.obolibrary.org/obo/CL_0000233)) - -- [platelet activation](http://purl.obolibrary.org/obo/GO_0030168) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [platelet](http://purl.obolibrary.org/obo/CL_0000233) - - -### pleura `http://purl.obolibrary.org/obo/UBERON_0000977` -#### Removed -- [pleura](http://purl.obolibrary.org/obo/UBERON_0000977) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pleura](http://purl.obolibrary.org/obo/UBERON_0000977) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pleural cavity `http://purl.obolibrary.org/obo/UBERON_0002402` -#### Removed -- [pleural cavity](http://purl.obolibrary.org/obo/UBERON_0002402) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pleural cavity](http://purl.obolibrary.org/obo/UBERON_0002402) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pleuroperitoneal membrane `http://purl.obolibrary.org/obo/UBERON_0009133` -#### Removed -- [pleuroperitoneal membrane](http://purl.obolibrary.org/obo/UBERON_0009133) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pleuroperitoneal membranes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0001483" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pleuroperitoneal membrane](http://purl.obolibrary.org/obo/UBERON_0009133) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pleuroperitoneal membranes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0001483" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### plural form `http://purl.obolibrary.org/obo/OMO_0003004` - -#### Added -- [plural form](http://purl.obolibrary.org/obo/OMO_0003004) SubPropertyOf: [synonym_type_property](http://www.geneontology.org/formats/oboInOwl#SynonymTypeProperty) - - -### podocyte `http://purl.obolibrary.org/obo/CL_0000653` -#### Removed -- [podocyte](http://purl.obolibrary.org/obo/CL_0000653) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### polysaccharide binding `http://purl.obolibrary.org/obo/GO_0030247` -#### Removed -- [polysaccharide binding](http://purl.obolibrary.org/obo/GO_0030247) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154)) - -- [polysaccharide binding](http://purl.obolibrary.org/obo/GO_0030247) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154) - -#### Added -- [polysaccharide binding](http://purl.obolibrary.org/obo/GO_0030247) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154)) - -- [polysaccharide binding](http://purl.obolibrary.org/obo/GO_0030247) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154) - - -### polysaccharide immune receptor activity `http://purl.obolibrary.org/obo/GO_0001873` -#### Removed -- [polysaccharide immune receptor activity](http://purl.obolibrary.org/obo/GO_0001873) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154)) - -- [polysaccharide immune receptor activity](http://purl.obolibrary.org/obo/GO_0001873) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154) - -#### Added -- [polysaccharide immune receptor activity](http://purl.obolibrary.org/obo/GO_0001873) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154)) - -- [polysaccharide immune receptor activity](http://purl.obolibrary.org/obo/GO_0001873) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18154](http://purl.obolibrary.org/obo/CHEBI_18154) - - -### pons `http://purl.obolibrary.org/obo/UBERON_0000988` -#### Removed -- [pons](http://purl.obolibrary.org/obo/UBERON_0000988) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pons](http://purl.obolibrary.org/obo/UBERON_0000988) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pontine tegmentum `http://purl.obolibrary.org/obo/UBERON_0003023` -#### Removed -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9c/Brainstem_Abducens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9c/Brainstem_Abducens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### popliteal vein `http://purl.obolibrary.org/obo/UBERON_0001544` -#### Removed -- [popliteal vein](http://purl.obolibrary.org/obo/UBERON_0001544) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray609.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [popliteal vein](http://purl.obolibrary.org/obo/UBERON_0001544) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray609.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### portal triad `http://purl.obolibrary.org/obo/UBERON_0001279` -#### Removed -- [portal triad](http://purl.obolibrary.org/obo/UBERON_0001279) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/62/Portal_triad.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [portal triad](http://purl.obolibrary.org/obo/UBERON_0001279) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/62/Portal_triad.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### portal vein `http://purl.obolibrary.org/obo/UBERON_0002017` -#### Removed -- [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### positive regulation of cell projection organization `http://purl.obolibrary.org/obo/GO_0031346` -#### Removed -- [positive regulation of cell projection organization](http://purl.obolibrary.org/obo/GO_0031346) SubClassOf [positive regulation of cell population proliferation](http://purl.obolibrary.org/obo/GO_0008284) - - - -### positive regulation of macrophage chemotaxis `http://purl.obolibrary.org/obo/GO_0010759` -#### Removed -- [positive regulation of macrophage chemotaxis](http://purl.obolibrary.org/obo/GO_0010759) SubClassOf [regulation of mononuclear cell migration](http://purl.obolibrary.org/obo/GO_0071675) - - - -### positive regulation of macrophage migration `http://purl.obolibrary.org/obo/GO_1905523` -#### Removed -- [positive regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905523) SubClassOf [positive regulation of leukocyte migration](http://purl.obolibrary.org/obo/GO_0002687) - -#### Added -- [positive regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905523) SubClassOf [positive regulation of mononuclear cell migration](http://purl.obolibrary.org/obo/GO_0071677) - - -### post-anal tail bud `http://purl.obolibrary.org/obo/UBERON_0002533` -#### Removed -- [post-anal tail bud](http://purl.obolibrary.org/obo/UBERON_0002533) SubClassOf [presumptive structure](http://purl.obolibrary.org/obo/UBERON_0006598) - -- [post-anal tail bud](http://purl.obolibrary.org/obo/UBERON_0002533) SubClassOf [has potential to develop into](http://purl.obolibrary.org/obo/RO_0002387) some [post-anal tail](http://purl.obolibrary.org/obo/UBERON_0007812) - -#### Added -- [post-anal tail bud](http://purl.obolibrary.org/obo/UBERON_0002533) SubClassOf [embryonic structure](http://purl.obolibrary.org/obo/UBERON_0002050) - - -### post-hyoid pharyngeal arch `http://purl.obolibrary.org/obo/UBERON_0008896` -#### Removed -- [post-hyoid pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0008896) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial bars" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001613" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [post-hyoid pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0008896) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001613" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [post-hyoid pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0008896) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial bars" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001613" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [post-hyoid pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0008896) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "branchial arches" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001613" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### posterior communicating artery `http://purl.obolibrary.org/obo/UBERON_0001628` -#### Removed -- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### posterior hypothalamic region `http://purl.obolibrary.org/obo/UBERON_0002770` -#### Removed -- [posterior hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002770) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1651" - -#### Added -- [posterior hypothalamic region](http://purl.obolibrary.org/obo/UBERON_0002770) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PHR" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1651" - - -### posterior lateral line neuromast `http://purl.obolibrary.org/obo/UBERON_2000940` -#### Removed -- [posterior lateral line neuromast](http://purl.obolibrary.org/obo/UBERON_2000940) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromasts posterior" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000940" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [posterior lateral line neuromast](http://purl.obolibrary.org/obo/UBERON_2000940) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "neuromasts posterior" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000940" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### posterior lateral line primordium `http://purl.obolibrary.org/obo/UBERON_2001157` -#### Removed -- [posterior lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2001157) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "posterior lateral line primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001157" - -#### Added -- [posterior lateral line primordium](http://purl.obolibrary.org/obo/UBERON_2001157) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "posterior lateral line primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001157" - - -### posterior nasal aperture `http://purl.obolibrary.org/obo/UBERON_0004771` -#### Removed -- [posterior nasal aperture](http://purl.obolibrary.org/obo/UBERON_0004771) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "choanae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000545" - -- [posterior nasal aperture](http://purl.obolibrary.org/obo/UBERON_0004771) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/87/Gray855.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [posterior nasal aperture](http://purl.obolibrary.org/obo/UBERON_0004771) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "choanae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000545" - -- [posterior nasal aperture](http://purl.obolibrary.org/obo/UBERON_0004771) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/87/Gray855.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### posterior segment of eyeball `http://purl.obolibrary.org/obo/UBERON_0001802` -#### Removed -- [posterior segment of eyeball](http://purl.obolibrary.org/obo/UBERON_0001802) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [posterior segment of eyeball](http://purl.obolibrary.org/obo/UBERON_0001802) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### posterior vena cava `http://purl.obolibrary.org/obo/UBERON_0001072` -#### Removed -- [posterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray577.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [posterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray577.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### posteroventral cochlear nucleus `http://purl.obolibrary.org/obo/UBERON_0002831` -#### Removed -- [posteroventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002831) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PVCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2573" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -#### Added -- [posteroventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002831) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "PVCo" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2573" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### preoptic area `http://purl.obolibrary.org/obo/UBERON_0001928` -#### Removed -- [preoptic area](http://purl.obolibrary.org/obo/UBERON_0001928) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [preoptic area](http://purl.obolibrary.org/obo/UBERON_0001928) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "POA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1706" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [preoptic area](http://purl.obolibrary.org/obo/UBERON_0001928) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "POA" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1706" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -- [preoptic area](http://purl.obolibrary.org/obo/UBERON_0001928) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### preoptic periventricular nucleus `http://purl.obolibrary.org/obo/UBERON_0002622` -#### Removed -- [preoptic periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002622) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "POP" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1201" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -#### Added -- [preoptic periventricular nucleus](http://purl.obolibrary.org/obo/UBERON_0002622) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "POP" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1201" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### prepuce of clitoris `http://purl.obolibrary.org/obo/UBERON_0005299` -#### Removed -- [prepuce of clitoris](http://purl.obolibrary.org/obo/UBERON_0005299) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Clitoris_outer_anatomy.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [prepuce of clitoris](http://purl.obolibrary.org/obo/UBERON_0005299) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Clitoris_outer_anatomy.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### prepuce of penis `http://purl.obolibrary.org/obo/UBERON_0001332` -#### Removed -- [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/en/thumb/c/cc/Foreskin2.jpg/200px-Foreskin2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Foreskin_CloseupV2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/en/thumb/c/cc/Foreskin2.jpg/200px-Foreskin2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Foreskin_CloseupV2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### presumptive neural retina `http://purl.obolibrary.org/obo/UBERON_0005425` -#### Removed -- [presumptive neural retina](http://purl.obolibrary.org/obo/UBERON_0005425) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "presumptive retinas" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001071" - -#### Added -- [presumptive neural retina](http://purl.obolibrary.org/obo/UBERON_0005425) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "presumptive retinas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001071" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### presumptive retinal pigmented epithelium `http://purl.obolibrary.org/obo/UBERON_0005424` -#### Removed -- [presumptive retinal pigmented epithelium](http://purl.obolibrary.org/obo/UBERON_0005424) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "presumptive pigmented epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000064" - -#### Added -- [presumptive retinal pigmented epithelium](http://purl.obolibrary.org/obo/UBERON_0005424) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "presumptive pigmented epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000064" - - -### presumptive segmental plate `http://purl.obolibrary.org/obo/UBERON_0007282` -#### Removed -- [presumptive segmental plate](http://purl.obolibrary.org/obo/UBERON_0007282) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "presumptive segmental plates" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000053" - -#### Added -- [presumptive segmental plate](http://purl.obolibrary.org/obo/UBERON_0007282) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "presumptive segmental plates" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000053" - - -### primary heart field `http://purl.obolibrary.org/obo/UBERON_0004140` -#### Removed -- [primary heart field](http://purl.obolibrary.org/obo/UBERON_0004140) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PHF" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004185" - -- [primary heart field](http://purl.obolibrary.org/obo/UBERON_0004140) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "FHF" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004185" - -#### Added -- [primary heart field](http://purl.obolibrary.org/obo/UBERON_0004140) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "FHF" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004185" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [primary heart field](http://purl.obolibrary.org/obo/UBERON_0004140) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PHF" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004185" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### primary lymphoid nodule of tonsil `http://purl.obolibrary.org/obo/UBERON_0010423` - -#### Added -- [primary lymphoid nodule of tonsil](http://purl.obolibrary.org/obo/UBERON_0010423) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [primary lymphoid nodule of tonsil](http://purl.obolibrary.org/obo/UBERON_0010423) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### primary motor cortex `http://purl.obolibrary.org/obo/UBERON_0001384` -#### Removed -- [primary motor cortex](http://purl.obolibrary.org/obo/UBERON_0001384) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/eb/Ba4.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [primary motor cortex](http://purl.obolibrary.org/obo/UBERON_0001384) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/eb/Ba4.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### primitive heart tube `http://purl.obolibrary.org/obo/UBERON_0005498` - -#### Added -- [primitive heart tube](http://purl.obolibrary.org/obo/UBERON_0005498) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006179" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### primitive streak `http://purl.obolibrary.org/obo/UBERON_0004341` -#### Removed -- [primitive streak](http://purl.obolibrary.org/obo/UBERON_0004341) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f4/Gray13.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [primitive streak](http://purl.obolibrary.org/obo/UBERON_0004341) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f4/Gray13.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### primitive urogenital sinus `http://purl.obolibrary.org/obo/UBERON_0000164` -#### Removed -- [primitive urogenital sinus](http://purl.obolibrary.org/obo/UBERON_0000164) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [primitive urogenital sinus](http://purl.obolibrary.org/obo/UBERON_0000164) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### primordium `http://purl.obolibrary.org/obo/UBERON_0001048` -#### Removed -- [primordium](http://purl.obolibrary.org/obo/UBERON_0001048) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0003043" - -#### Added -- [primordium](http://purl.obolibrary.org/obo/UBERON_0001048) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0003043" - - -### prolactin receptor activity `http://purl.obolibrary.org/obo/GO_0004925` -#### Removed -- [prolactin receptor activity](http://purl.obolibrary.org/obo/GO_0004925) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [prolactin](http://purl.obolibrary.org/obo/PR_000013246)) - -- [prolactin receptor activity](http://purl.obolibrary.org/obo/GO_0004925) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [prolactin](http://purl.obolibrary.org/obo/PR_000013246) - -#### Added -- [prolactin receptor activity](http://purl.obolibrary.org/obo/GO_0004925) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [prolactin](http://purl.obolibrary.org/obo/PR_000013246)) - -- [prolactin receptor activity](http://purl.obolibrary.org/obo/GO_0004925) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [prolactin](http://purl.obolibrary.org/obo/PR_000013246) - - -### pronephric duct `http://purl.obolibrary.org/obo/UBERON_0003060` -#### Removed -- [pronephric duct](http://purl.obolibrary.org/obo/UBERON_0003060) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pronephric ducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000150" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pronephric duct](http://purl.obolibrary.org/obo/UBERON_0003060) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005991" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [pronephric duct](http://purl.obolibrary.org/obo/UBERON_0003060) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pronephric ducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000150" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pronephric glomerulus `http://purl.obolibrary.org/obo/UBERON_0004739` -#### Removed -- [pronephric glomerulus](http://purl.obolibrary.org/obo/UBERON_0004739) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "glomera" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000318" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [pronephric glomerulus](http://purl.obolibrary.org/obo/UBERON_0004739) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pronephric glomeruli" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001237" - -#### Added -- [pronephric glomerulus](http://purl.obolibrary.org/obo/UBERON_0004739) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "pronephric glomeruli" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001237" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pronephric glomerulus](http://purl.obolibrary.org/obo/UBERON_0004739) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "glomera" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000318" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### pronephric podocyte `http://purl.obolibrary.org/obo/CL_4030008` -#### Removed -- [pronephric podocyte](http://purl.obolibrary.org/obo/CL_4030008) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### pronephric proximal straight tubule `http://purl.obolibrary.org/obo/UBERON_0009622` -#### Removed -- [pronephric proximal straight tubule](http://purl.obolibrary.org/obo/UBERON_0009622) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "proximal straight tubules" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002239" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [pronephric proximal straight tubule](http://purl.obolibrary.org/obo/UBERON_0009622) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "proximal straight tubules" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002239" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### prostanoid receptor binding `http://purl.obolibrary.org/obo/GO_0031862` -#### Removed -- [prostanoid receptor binding](http://purl.obolibrary.org/obo/GO_0031862) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [prostanoid receptor](http://purl.obolibrary.org/obo/PR_000001549)) - -- [prostanoid receptor binding](http://purl.obolibrary.org/obo/GO_0031862) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [prostanoid receptor](http://purl.obolibrary.org/obo/PR_000001549) - -#### Added -- [prostanoid receptor binding](http://purl.obolibrary.org/obo/GO_0031862) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [prostanoid receptor](http://purl.obolibrary.org/obo/PR_000001549)) - -- [prostanoid receptor binding](http://purl.obolibrary.org/obo/GO_0031862) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [prostanoid receptor](http://purl.obolibrary.org/obo/PR_000001549) - - -### prostate duct `http://purl.obolibrary.org/obo/UBERON_0002485` -#### Removed -- [prostate duct](http://purl.obolibrary.org/obo/UBERON_0002485) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -#### Added -- [prostate duct](http://purl.obolibrary.org/obo/UBERON_0002485) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### prostate gland `http://purl.obolibrary.org/obo/UBERON_0002367` -#### Removed -- [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Prostatelead.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -#### Added -- [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Prostatelead.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### prostate gland smooth muscle `http://purl.obolibrary.org/obo/UBERON_0004243` - -#### Added -- [prostate gland smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004243) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [prostate gland smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004243) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### prostate glandular acinus `http://purl.obolibrary.org/obo/UBERON_0004179` - -#### Added -- [prostate glandular acinus](http://purl.obolibrary.org/obo/UBERON_0004179) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [prostate glandular acinus](http://purl.obolibrary.org/obo/UBERON_0004179) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### prostatic urethra `http://purl.obolibrary.org/obo/UBERON_0001335` -#### Removed -- [prostatic urethra](http://purl.obolibrary.org/obo/UBERON_0001335) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prostatic urethra](http://purl.obolibrary.org/obo/UBERON_0001335) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urethra.glb" - -#### Added -- [prostatic urethra](http://purl.obolibrary.org/obo/UBERON_0001335) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urethra.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prostatic urethra](http://purl.obolibrary.org/obo/UBERON_0001335) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### prostatic venous plexus `http://purl.obolibrary.org/obo/UBERON_0009042` -#### Removed -- [prostatic venous plexus](http://purl.obolibrary.org/obo/UBERON_0009042) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [prostatic venous plexus](http://purl.obolibrary.org/obo/UBERON_0009042) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [prostatic venous plexus](http://purl.obolibrary.org/obo/UBERON_0009042) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [prostatic venous plexus](http://purl.obolibrary.org/obo/UBERON_0009042) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### protein binding `http://purl.obolibrary.org/obo/GO_0005515` -#### Removed -- [protein binding](http://purl.obolibrary.org/obo/GO_0005515) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein](http://purl.obolibrary.org/obo/PR_000000001)) - -- [protein binding](http://purl.obolibrary.org/obo/GO_0005515) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein](http://purl.obolibrary.org/obo/PR_000000001) - -#### Added -- [protein binding](http://purl.obolibrary.org/obo/GO_0005515) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein](http://purl.obolibrary.org/obo/PR_000000001)) - -- [protein binding](http://purl.obolibrary.org/obo/GO_0005515) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein](http://purl.obolibrary.org/obo/PR_000000001) - - -### protein kinase activity `http://purl.obolibrary.org/obo/GO_0004672` -#### Removed -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9732753" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "JAK1-activated RAF1 phosphorylates MAPKs" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836383" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates ILF3:ILF2" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836159" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates DHX9" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9835885" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates eIF2-alpha" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836664" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates PPP2R5A" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836435" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates SNCA" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836184" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates CDK1" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836404" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates MAPT" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836322" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates MKK6" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836617" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates SPHK1" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836515" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates PTPN2" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836449" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates HIV tat" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9836362" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "p-PKR dimer phosphorylates TP53 tetramer" - -- [protein kinase activity](http://purl.obolibrary.org/obo/GO_0004672) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9833820" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "PKR dimer autophosphorylates" - - - -### protein transporter activity `http://purl.obolibrary.org/obo/GO_0140318` -#### Removed -- [protein transporter activity](http://purl.obolibrary.org/obo/GO_0140318) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-2248891" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "M6PR transports activated ARSA to the lysosome" - - - -### protein tyrosine kinase activity `http://purl.obolibrary.org/obo/GO_0004713` -#### Removed -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9762209" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "BACH1 is phosphorylated at tyrosine 483" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9732738" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "JAK1-mediated phosphorylation of RAF1" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-8964252" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "G alpha (s):GTP:SRC catalyzes SRC to p-Y419-SRC" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-5357429" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "AXL autophosphorylates on Y779 and Y821" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-8964242" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "G protein alpha (i)-SRC complex catalyzes SRC to p-Y419-SRC" - -#### Added -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-5357429" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "AXL autophosphorylates on Y772 and Y814" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-8964252" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "G alpha (s):GTP:SRC catalyzes SRC to p-Y416-SRC" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-8964242" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "G protein alpha (i)-SRC complex catalyzes SRC to p-Y416-SRC" - -- [protein tyrosine kinase activity](http://purl.obolibrary.org/obo/GO_0004713) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-9762209" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "BACH1 is phosphorylated at tyrosine 486" - - -### protein-containing complex binding `http://purl.obolibrary.org/obo/GO_0044877` -#### Removed -- [protein-containing complex binding](http://purl.obolibrary.org/obo/GO_0044877) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991)) - -- [protein-containing complex binding](http://purl.obolibrary.org/obo/GO_0044877) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991) - -#### Added -- [protein-containing complex binding](http://purl.obolibrary.org/obo/GO_0044877) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991)) - -- [protein-containing complex binding](http://purl.obolibrary.org/obo/GO_0044877) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991) - - -### protein-lipid complex binding `http://purl.obolibrary.org/obo/GO_0071814` -#### Removed -- [protein-lipid complex binding](http://purl.obolibrary.org/obo/GO_0071814) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein-lipid complex](http://purl.obolibrary.org/obo/GO_0032994)) - -- [protein-lipid complex binding](http://purl.obolibrary.org/obo/GO_0071814) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [protein-lipid complex](http://purl.obolibrary.org/obo/GO_0032994) - -#### Added -- [protein-lipid complex binding](http://purl.obolibrary.org/obo/GO_0071814) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein-lipid complex](http://purl.obolibrary.org/obo/GO_0032994)) - -- [protein-lipid complex binding](http://purl.obolibrary.org/obo/GO_0071814) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [protein-lipid complex](http://purl.obolibrary.org/obo/GO_0032994) - - -### proteoglycan binding `http://purl.obolibrary.org/obo/GO_0043394` -#### Removed -- [proteoglycan binding](http://purl.obolibrary.org/obo/GO_0043394) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_37396](http://purl.obolibrary.org/obo/CHEBI_37396)) - -- [proteoglycan binding](http://purl.obolibrary.org/obo/GO_0043394) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_37396](http://purl.obolibrary.org/obo/CHEBI_37396) - -#### Added -- [proteoglycan binding](http://purl.obolibrary.org/obo/GO_0043394) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_37396](http://purl.obolibrary.org/obo/CHEBI_37396)) - -- [proteoglycan binding](http://purl.obolibrary.org/obo/GO_0043394) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_37396](http://purl.obolibrary.org/obo/CHEBI_37396) - - -### proximal convoluted tubule `http://purl.obolibrary.org/obo/UBERON_0001287` -#### Removed -- [proximal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001287) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [proximal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001287) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### proximal epiphysis of fibula `http://purl.obolibrary.org/obo/UBERON_0008775` -#### Removed -- [proximal epiphysis of fibula](http://purl.obolibrary.org/obo/UBERON_0008775) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [proximal epiphysis of fibula](http://purl.obolibrary.org/obo/UBERON_0008775) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - - -### proximal epiphysis of humerus `http://purl.obolibrary.org/obo/UBERON_0004411` -#### Removed -- [proximal epiphysis of humerus](http://purl.obolibrary.org/obo/UBERON_0004411) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray207.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [proximal epiphysis of humerus](http://purl.obolibrary.org/obo/UBERON_0004411) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray207.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### proximal epiphysis of tibia `http://purl.obolibrary.org/obo/UBERON_0008772` -#### Removed -- [proximal epiphysis of tibia](http://purl.obolibrary.org/obo/UBERON_0008772) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [proximal epiphysis of tibia](http://purl.obolibrary.org/obo/UBERON_0008772) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - - -### pulmonary acinus `http://purl.obolibrary.org/obo/UBERON_0008874` -#### Removed -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "respiratory lobule" - -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lobulus pulmonis primarius" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:7313" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [LATIN](http://purl.obolibrary.org/obo/uberon/core#LATIN) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "primary pulmonary lobule" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:7313" - -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The part of the airway consisting of a respiratory bronchiole and all of its branches." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010911" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Acinus#The_Lungs" - -#### Added -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "pulmonary acini" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:37025383" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The largest lung subunit in which all airways participate in gas exchange, and it is composed of the parenchyma of the respiratory bronchioles, alveolar ducts, and alveoli." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0010911" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:2014492" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:3382030" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Acinus#The_Lungs" - -- [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) - - -### pulmonary alveolar duct `http://purl.obolibrary.org/obo/UBERON_0002173` -#### Removed -- [pulmonary alveolar duct](http://purl.obolibrary.org/obo/UBERON_0002173) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8f/Gray975.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pulmonary alveolar duct](http://purl.obolibrary.org/obo/UBERON_0002173) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8f/Gray975.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0002012` -#### Removed -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pulmonary trunk `http://purl.obolibrary.org/obo/UBERON_0002333` -#### Removed -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary trunk](http://purl.obolibrary.org/obo/UBERON_0002333) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pulmonary vein `http://purl.obolibrary.org/obo/UBERON_0002016` -#### Removed -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### putamen `http://purl.obolibrary.org/obo/UBERON_0001874` -#### Removed -- [putamen](http://purl.obolibrary.org/obo/UBERON_0001874) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [putamen](http://purl.obolibrary.org/obo/UBERON_0001874) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pyloric antrum `http://purl.obolibrary.org/obo/UBERON_0001165` -#### Removed -- [pyloric antrum](http://purl.obolibrary.org/obo/UBERON_0001165) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pyloric antrum](http://purl.obolibrary.org/obo/UBERON_0001165) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pyloric canal `http://purl.obolibrary.org/obo/UBERON_0008858` -#### Removed -- [pyloric canal](http://purl.obolibrary.org/obo/UBERON_0008858) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pyloric canal](http://purl.obolibrary.org/obo/UBERON_0008858) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pyloric gastric gland `http://purl.obolibrary.org/obo/UBERON_0008861` -#### Removed -- [pyloric gastric gland](http://purl.obolibrary.org/obo/UBERON_0008861) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pyloric gastric gland](http://purl.obolibrary.org/obo/UBERON_0008861) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### pylorus `http://purl.obolibrary.org/obo/UBERON_0001166` -#### Removed -- [pylorus](http://purl.obolibrary.org/obo/UBERON_0001166) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [pylorus](http://purl.obolibrary.org/obo/UBERON_0001166) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### raphe nuclei `http://purl.obolibrary.org/obo/UBERON_0004684` -#### Removed -- [raphe nuclei](http://purl.obolibrary.org/obo/UBERON_0004684) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [raphe nuclei](http://purl.obolibrary.org/obo/UBERON_0004684) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### rectal venous plexus `http://purl.obolibrary.org/obo/UBERON_0008887` -#### Removed -- [rectal venous plexus](http://purl.obolibrary.org/obo/UBERON_0008887) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray587.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [rectal venous plexus](http://purl.obolibrary.org/obo/UBERON_0008887) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray587.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### rectum `http://purl.obolibrary.org/obo/UBERON_0001052` -#### Removed -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -#### Added -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [rectum](http://purl.obolibrary.org/obo/UBERON_0001052) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/75/Anorectum.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### red pulp of spleen `http://purl.obolibrary.org/obo/UBERON_0001250` -#### Removed -- [red pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001250) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [red pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001250) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### regenerating anatomical structure `http://purl.obolibrary.org/obo/UBERON_0007567` -#### Removed -- [regenerating anatomical structure](http://purl.obolibrary.org/obo/UBERON_0007567) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "regenerating tissues" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005147" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [regenerating anatomical structure](http://purl.obolibrary.org/obo/UBERON_0007567) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "regenerating tissues" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005147" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### regenerating fin/limb `http://purl.obolibrary.org/obo/UBERON_2001269` -#### Removed -- [regenerating fin/limb](http://purl.obolibrary.org/obo/UBERON_2001269) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "regenerating fins" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001269" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [regenerating fin/limb](http://purl.obolibrary.org/obo/UBERON_2001269) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "regenerating fins" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001269" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### regulation of cell migration `http://purl.obolibrary.org/obo/GO_0030334` - -#### Added -- [regulation of cell migration](http://purl.obolibrary.org/obo/GO_0030334) [never_in_taxon](http://purl.obolibrary.org/obo/RO_0002161) [Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890) - -- [regulation of cell migration](http://purl.obolibrary.org/obo/GO_0030334) DisjointWith [in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890) - -- [regulation of cell migration](http://purl.obolibrary.org/obo/GO_0030334) SubClassOf [in taxon](http://purl.obolibrary.org/obo/RO_0002162) some (not ([Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890))) - -- [regulation of cell migration](http://purl.obolibrary.org/obo/GO_0030334) SubClassOf not ([in taxon](http://purl.obolibrary.org/obo/RO_0002162) some [Ascomycota](http://purl.obolibrary.org/obo/NCBITaxon_4890)) - - -### regulation of cell projection organization `http://purl.obolibrary.org/obo/GO_0031344` -#### Removed -- [regulation of cell projection organization](http://purl.obolibrary.org/obo/GO_0031344) SubClassOf [regulation of cell population proliferation](http://purl.obolibrary.org/obo/GO_0042127) - - - -### regulation of macrophage migration `http://purl.obolibrary.org/obo/GO_1905521` -#### Removed -- [regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905521) SubClassOf [regulation of leukocyte migration](http://purl.obolibrary.org/obo/GO_0002685) - -#### Added -- [regulation of macrophage migration](http://purl.obolibrary.org/obo/GO_1905521) SubClassOf [regulation of mononuclear cell migration](http://purl.obolibrary.org/obo/GO_0071675) - - -### regulation of protein catabolic process at synapse, modulating synaptic transmission `http://purl.obolibrary.org/obo/GO_0099574` -#### Removed -- [regulation of protein catabolic process at synapse, modulating synaptic transmission](http://purl.obolibrary.org/obo/GO_0099574) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [synapse](http://purl.obolibrary.org/obo/GO_0045202)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [chemical synaptic transmission](http://purl.obolibrary.org/obo/GO_0007268)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - -#### Added -- [regulation of protein catabolic process at synapse, modulating synaptic transmission](http://purl.obolibrary.org/obo/GO_0099574) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [synapse](http://purl.obolibrary.org/obo/GO_0045202)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [chemical synaptic transmission](http://purl.obolibrary.org/obo/GO_0007268)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - - -### regulation protein catabolic process at postsynapse `http://purl.obolibrary.org/obo/GO_0140252` -#### Removed -- [regulation protein catabolic process at postsynapse](http://purl.obolibrary.org/obo/GO_0140252) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [postsynapse](http://purl.obolibrary.org/obo/GO_0098794)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - -#### Added -- [regulation protein catabolic process at postsynapse](http://purl.obolibrary.org/obo/GO_0140252) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [postsynapse](http://purl.obolibrary.org/obo/GO_0098794)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - - -### regulation protein catabolic process at presynapse `http://purl.obolibrary.org/obo/GO_0140251` -#### Removed -- [regulation protein catabolic process at presynapse](http://purl.obolibrary.org/obo/GO_0140251) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [presynapse](http://purl.obolibrary.org/obo/GO_0098793)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - -#### Added -- [regulation protein catabolic process at presynapse](http://purl.obolibrary.org/obo/GO_0140251) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [presynapse](http://purl.obolibrary.org/obo/GO_0098793)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - - -### regulation protein catabolic process at synapse `http://purl.obolibrary.org/obo/GO_0140250` -#### Removed -- [regulation protein catabolic process at synapse](http://purl.obolibrary.org/obo/GO_0140250) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [synapse](http://purl.obolibrary.org/obo/GO_0045202)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - -- [regulation protein catabolic process at synapse](http://purl.obolibrary.org/obo/GO_0140250) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080) - -#### Added -- [regulation protein catabolic process at synapse](http://purl.obolibrary.org/obo/GO_0140250) EquivalentTo [biological regulation](http://purl.obolibrary.org/obo/GO_0065007) and ([occurs in](http://purl.obolibrary.org/obo/BFO_0000066) some [synapse](http://purl.obolibrary.org/obo/GO_0045202)) and ([regulates](http://purl.obolibrary.org/obo/RO_0002211) some [catabolic process](http://purl.obolibrary.org/obo/GO_0009056)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080)) - -- [regulation protein catabolic process at synapse](http://purl.obolibrary.org/obo/GO_0140250) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_36080](http://purl.obolibrary.org/obo/CHEBI_36080) - - -### renal afferent arteriole `http://purl.obolibrary.org/obo/UBERON_0004639` -#### Removed -- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal artery `http://purl.obolibrary.org/obo/UBERON_0001184` -#### Removed -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "renal arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "renal arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal collecting system `http://purl.obolibrary.org/obo/UBERON_0004100` -#### Removed -- [renal collecting system](http://purl.obolibrary.org/obo/UBERON_0004100) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal collecting system](http://purl.obolibrary.org/obo/UBERON_0004100) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal connecting tubule `http://purl.obolibrary.org/obo/UBERON_0005097` -#### Removed -- [renal connecting tubule](http://purl.obolibrary.org/obo/UBERON_0005097) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal connecting tubule](http://purl.obolibrary.org/obo/UBERON_0005097) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal corpuscle `http://purl.obolibrary.org/obo/UBERON_0001229` -#### Removed -- [renal corpuscle](http://purl.obolibrary.org/obo/UBERON_0001229) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal corpuscle](http://purl.obolibrary.org/obo/UBERON_0001229) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal cortical fibroblast `http://purl.obolibrary.org/obo/CL_4030025` -#### Removed -- [renal cortical fibroblast](http://purl.obolibrary.org/obo/CL_4030025) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### renal efferent arteriole `http://purl.obolibrary.org/obo/UBERON_0004640` -#### Removed -- [renal efferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004640) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal efferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004640) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal glomerulus `http://purl.obolibrary.org/obo/UBERON_0000074` -#### Removed -- [renal glomerulus](http://purl.obolibrary.org/obo/UBERON_0000074) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal glomerulus](http://purl.obolibrary.org/obo/UBERON_0000074) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal glomerulus](http://purl.obolibrary.org/obo/UBERON_0000074) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal glomerulus](http://purl.obolibrary.org/obo/UBERON_0000074) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal intercalated cell `http://purl.obolibrary.org/obo/CL_0005010` -#### Removed -- [renal intercalated cell](http://purl.obolibrary.org/obo/CL_0005010) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### renal interlobular vein `http://purl.obolibrary.org/obo/UBERON_0005168` -#### Removed -- [renal interlobular vein](http://purl.obolibrary.org/obo/UBERON_0005168) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal interlobular vein](http://purl.obolibrary.org/obo/UBERON_0005168) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal lobe `http://purl.obolibrary.org/obo/UBERON_0009913` -#### Removed -- [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lobi renalis" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Renal_lobe" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lobi renalis" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Renal_lobe" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal medulla `http://purl.obolibrary.org/obo/UBERON_0000362` -#### Removed -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal pyramids set" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal medullae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:86327" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal pyramids" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "medullary pyramids" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal medullae set" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:86327" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal pyramids" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal pyramids set" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "medullary pyramids" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:74268" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal medullae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:86327" - -- [renal medulla](http://purl.obolibrary.org/obo/UBERON_0000362) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal medullae set" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:86327" - - -### renal medullary fibroblast `http://purl.obolibrary.org/obo/CL_4030022` -#### Removed -- [renal medullary fibroblast](http://purl.obolibrary.org/obo/CL_4030022) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### renal papilla `http://purl.obolibrary.org/obo/UBERON_0001228` -#### Removed -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb" - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_L.glb" - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_R.glb" - -#### Added -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7e/Kidney_PioM.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal papilla](http://purl.obolibrary.org/obo/UBERON_0001228) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal pelvis `http://purl.obolibrary.org/obo/UBERON_0001224` -#### Removed -- [renal pelvis](http://purl.obolibrary.org/obo/UBERON_0001224) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal pelvis](http://purl.obolibrary.org/obo/UBERON_0001224) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### renal system `http://purl.obolibrary.org/obo/UBERON_0001008` -#### Removed -- [renal system](http://purl.obolibrary.org/obo/UBERON_0001008) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "In various sources such as Encyclopedia Britannica, the excretory and urinary systems are indeed the same system (see wikipedia talk page); we merge two BTO classes here" - -#### Added -- [renal system](http://purl.obolibrary.org/obo/UBERON_0001008) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [renal system](http://purl.obolibrary.org/obo/UBERON_0001008) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE In various sources such as Encyclopedia Britannica, the excretory and urinary systems are indeed the same system (see wikipedia talk page); we merge two BTO classes here" - -- [renal system](http://purl.obolibrary.org/obo/UBERON_0001008) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### renal vein `http://purl.obolibrary.org/obo/UBERON_0001140` -#### Removed -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### replacement bone `http://purl.obolibrary.org/obo/UBERON_0012075` -#### Removed -- [replacement bone](http://purl.obolibrary.org/obo/UBERON_0012075) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "replacement bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001628" - -#### Added -- [replacement bone](http://purl.obolibrary.org/obo/UBERON_0012075) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "replacement bones" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001628" - - -### reproductive gland `http://purl.obolibrary.org/obo/UBERON_0003937` - -#### Added -- [reproductive gland](http://purl.obolibrary.org/obo/UBERON_0003937) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006162" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### reproductive organ `http://purl.obolibrary.org/obo/UBERON_0003133` -#### Removed -- [reproductive organ](http://purl.obolibrary.org/obo/UBERON_0003133) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "genitalia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [reproductive organ](http://purl.obolibrary.org/obo/UBERON_0003133) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "genitalia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### reproductive system `http://purl.obolibrary.org/obo/UBERON_0000990` -#### Removed -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "genitalia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/52/Penis.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "genitalia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/52/Penis.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### respiratory airway `http://purl.obolibrary.org/obo/UBERON_0001005` -#### Removed -- [respiratory airway](http://purl.obolibrary.org/obo/UBERON_0001005) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "airways" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [respiratory airway](http://purl.obolibrary.org/obo/UBERON_0001005) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "airways" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### respiratory bronchiole `http://purl.obolibrary.org/obo/UBERON_0002188` -#### Removed -- [respiratory bronchiole](http://purl.obolibrary.org/obo/UBERON_0002188) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [respiratory bronchiole](http://purl.obolibrary.org/obo/UBERON_0002188) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### respiratory hillock cell `http://purl.obolibrary.org/obo/CL_4030023` -#### Removed -- [respiratory hillock cell](http://purl.obolibrary.org/obo/CL_4030023) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](http://orcid.org/0000-0002-1773-2692) - - - -### respiratory system `http://purl.obolibrary.org/obo/UBERON_0001004` -#### Removed -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### response to ATP `http://purl.obolibrary.org/obo/GO_0033198` -#### Removed -- [response to ATP](http://purl.obolibrary.org/obo/GO_0033198) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) - -- [response to ATP](http://purl.obolibrary.org/obo/GO_0033198) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) - -#### Added -- [response to ATP](http://purl.obolibrary.org/obo/GO_0033198) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616)) - -- [response to ATP](http://purl.obolibrary.org/obo/GO_0033198) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30616](http://purl.obolibrary.org/obo/CHEBI_30616) - - -### response to L-glutamate `http://purl.obolibrary.org/obo/GO_1902065` -#### Removed -- [response to L-glutamate](http://purl.obolibrary.org/obo/GO_1902065) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985)) - -- [response to L-glutamate](http://purl.obolibrary.org/obo/GO_1902065) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985) - -#### Added -- [response to L-glutamate](http://purl.obolibrary.org/obo/GO_1902065) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985)) - -- [response to L-glutamate](http://purl.obolibrary.org/obo/GO_1902065) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29985](http://purl.obolibrary.org/obo/CHEBI_29985) - - -### response to acetylcholine `http://purl.obolibrary.org/obo/GO_1905144` -#### Removed -- [response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905144) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) - -- [response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905144) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) - -#### Added -- [response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905144) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355)) - -- [response to acetylcholine](http://purl.obolibrary.org/obo/GO_1905144) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15355](http://purl.obolibrary.org/obo/CHEBI_15355) - - -### response to aldosterone `http://purl.obolibrary.org/obo/GO_1904044` -#### Removed -- [response to aldosterone](http://purl.obolibrary.org/obo/GO_1904044) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584)) - -- [response to aldosterone](http://purl.obolibrary.org/obo/GO_1904044) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584) - -#### Added -- [response to aldosterone](http://purl.obolibrary.org/obo/GO_1904044) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584)) - -- [response to aldosterone](http://purl.obolibrary.org/obo/GO_1904044) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_27584](http://purl.obolibrary.org/obo/CHEBI_27584) - - -### response to amine `http://purl.obolibrary.org/obo/GO_0014075` -#### Removed -- [response to amine](http://purl.obolibrary.org/obo/GO_0014075) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) - -- [response to amine](http://purl.obolibrary.org/obo/GO_0014075) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) - -#### Added -- [response to amine](http://purl.obolibrary.org/obo/GO_0014075) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952)) - -- [response to amine](http://purl.obolibrary.org/obo/GO_0014075) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_32952](http://purl.obolibrary.org/obo/CHEBI_32952) - - -### response to amino acid `http://purl.obolibrary.org/obo/GO_0043200` -#### Removed -- [response to amino acid](http://purl.obolibrary.org/obo/GO_0043200) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) - -- [response to amino acid](http://purl.obolibrary.org/obo/GO_0043200) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709) - -#### Added -- [response to amino acid](http://purl.obolibrary.org/obo/GO_0043200) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709)) - -- [response to amino acid](http://purl.obolibrary.org/obo/GO_0043200) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33709](http://purl.obolibrary.org/obo/CHEBI_33709) - - -### response to ammonium ion `http://purl.obolibrary.org/obo/GO_0060359` -#### Removed -- [response to ammonium ion](http://purl.obolibrary.org/obo/GO_0060359) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) - -- [response to ammonium ion](http://purl.obolibrary.org/obo/GO_0060359) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938) - -#### Added -- [response to ammonium ion](http://purl.obolibrary.org/obo/GO_0060359) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938)) - -- [response to ammonium ion](http://purl.obolibrary.org/obo/GO_0060359) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_28938](http://purl.obolibrary.org/obo/CHEBI_28938) - - -### response to bacterium `http://purl.obolibrary.org/obo/GO_0009617` -#### Removed -- [response to bacterium](http://purl.obolibrary.org/obo/GO_0009617) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2)) - -- [response to bacterium](http://purl.obolibrary.org/obo/GO_0009617) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2) - -#### Added -- [response to bacterium](http://purl.obolibrary.org/obo/GO_0009617) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2)) - -- [response to bacterium](http://purl.obolibrary.org/obo/GO_0009617) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Bacteria](http://purl.obolibrary.org/obo/NCBITaxon_2) - - -### response to bile acid `http://purl.obolibrary.org/obo/GO_1903412` -#### Removed -- [response to bile acid](http://purl.obolibrary.org/obo/GO_1903412) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098)) - -- [response to bile acid](http://purl.obolibrary.org/obo/GO_1903412) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098) - -#### Added -- [response to bile acid](http://purl.obolibrary.org/obo/GO_1903412) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098)) - -- [response to bile acid](http://purl.obolibrary.org/obo/GO_1903412) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_3098](http://purl.obolibrary.org/obo/CHEBI_3098) - - -### response to calcium ion `http://purl.obolibrary.org/obo/GO_0051592` -#### Removed -- [response to calcium ion](http://purl.obolibrary.org/obo/GO_0051592) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108)) - -- [response to calcium ion](http://purl.obolibrary.org/obo/GO_0051592) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108) - -#### Added -- [response to calcium ion](http://purl.obolibrary.org/obo/GO_0051592) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108)) - -- [response to calcium ion](http://purl.obolibrary.org/obo/GO_0051592) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_29108](http://purl.obolibrary.org/obo/CHEBI_29108) - - -### response to carbohydrate `http://purl.obolibrary.org/obo/GO_0009743` -#### Removed -- [response to carbohydrate](http://purl.obolibrary.org/obo/GO_0009743) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - -- [response to carbohydrate](http://purl.obolibrary.org/obo/GO_0009743) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646) - -#### Added -- [response to carbohydrate](http://purl.obolibrary.org/obo/GO_0009743) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646)) - -- [response to carbohydrate](http://purl.obolibrary.org/obo/GO_0009743) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16646](http://purl.obolibrary.org/obo/CHEBI_16646) - - -### response to catecholamine `http://purl.obolibrary.org/obo/GO_0071869` -#### Removed -- [response to catecholamine](http://purl.obolibrary.org/obo/GO_0071869) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - -- [response to catecholamine](http://purl.obolibrary.org/obo/GO_0071869) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567) - -#### Added -- [response to catecholamine](http://purl.obolibrary.org/obo/GO_0071869) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567)) - -- [response to catecholamine](http://purl.obolibrary.org/obo/GO_0071869) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33567](http://purl.obolibrary.org/obo/CHEBI_33567) - - -### response to chemical `http://purl.obolibrary.org/obo/GO_0042221` -#### Removed -- [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24431](http://purl.obolibrary.org/obo/CHEBI_24431)) - -- [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24431](http://purl.obolibrary.org/obo/CHEBI_24431) - -#### Added -- [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24431](http://purl.obolibrary.org/obo/CHEBI_24431)) - -- [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24431](http://purl.obolibrary.org/obo/CHEBI_24431) - - -### response to cholecystokinin `http://purl.obolibrary.org/obo/GO_0061847` -#### Removed -- [response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061847) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - -- [response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061847) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110) - -#### Added -- [response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061847) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110)) - -- [response to cholecystokinin](http://purl.obolibrary.org/obo/GO_0061847) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [cholecystokinin](http://purl.obolibrary.org/obo/PR_000005110) - - -### response to dopamine `http://purl.obolibrary.org/obo/GO_1903350` -#### Removed -- [response to dopamine](http://purl.obolibrary.org/obo/GO_1903350) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - -- [response to dopamine](http://purl.obolibrary.org/obo/GO_1903350) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905) - -#### Added -- [response to dopamine](http://purl.obolibrary.org/obo/GO_1903350) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905)) - -- [response to dopamine](http://purl.obolibrary.org/obo/GO_1903350) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_59905](http://purl.obolibrary.org/obo/CHEBI_59905) - - -### response to epinephrine `http://purl.obolibrary.org/obo/GO_0071871` -#### Removed -- [response to epinephrine](http://purl.obolibrary.org/obo/GO_0071871) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - -- [response to epinephrine](http://purl.obolibrary.org/obo/GO_0071871) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568) - -#### Added -- [response to epinephrine](http://purl.obolibrary.org/obo/GO_0071871) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568)) - -- [response to epinephrine](http://purl.obolibrary.org/obo/GO_0071871) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33568](http://purl.obolibrary.org/obo/CHEBI_33568) - - -### response to estradiol `http://purl.obolibrary.org/obo/GO_0032355` -#### Removed -- [response to estradiol](http://purl.obolibrary.org/obo/GO_0032355) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - -- [response to estradiol](http://purl.obolibrary.org/obo/GO_0032355) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965) - -#### Added -- [response to estradiol](http://purl.obolibrary.org/obo/GO_0032355) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965)) - -- [response to estradiol](http://purl.obolibrary.org/obo/GO_0032355) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_23965](http://purl.obolibrary.org/obo/CHEBI_23965) - - -### response to fungus `http://purl.obolibrary.org/obo/GO_0009620` -#### Removed -- [response to fungus](http://purl.obolibrary.org/obo/GO_0009620) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751)) - -- [response to fungus](http://purl.obolibrary.org/obo/GO_0009620) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751) - -#### Added -- [response to fungus](http://purl.obolibrary.org/obo/GO_0009620) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751)) - -- [response to fungus](http://purl.obolibrary.org/obo/GO_0009620) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Fungi](http://purl.obolibrary.org/obo/NCBITaxon_4751) - - -### response to glucagon `http://purl.obolibrary.org/obo/GO_0033762` -#### Removed -- [response to glucagon](http://purl.obolibrary.org/obo/GO_0033762) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - -- [response to glucagon](http://purl.obolibrary.org/obo/GO_0033762) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391) - -#### Added -- [response to glucagon](http://purl.obolibrary.org/obo/GO_0033762) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391)) - -- [response to glucagon](http://purl.obolibrary.org/obo/GO_0033762) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_5391](http://purl.obolibrary.org/obo/CHEBI_5391) - - -### response to glucocorticoid `http://purl.obolibrary.org/obo/GO_0051384` -#### Removed -- [response to glucocorticoid](http://purl.obolibrary.org/obo/GO_0051384) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - -- [response to glucocorticoid](http://purl.obolibrary.org/obo/GO_0051384) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261) - -#### Added -- [response to glucocorticoid](http://purl.obolibrary.org/obo/GO_0051384) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261)) - -- [response to glucocorticoid](http://purl.obolibrary.org/obo/GO_0051384) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24261](http://purl.obolibrary.org/obo/CHEBI_24261) - - -### response to glucose `http://purl.obolibrary.org/obo/GO_0009749` -#### Removed -- [response to glucose](http://purl.obolibrary.org/obo/GO_0009749) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - -- [response to glucose](http://purl.obolibrary.org/obo/GO_0009749) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234) - -#### Added -- [response to glucose](http://purl.obolibrary.org/obo/GO_0009749) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234)) - -- [response to glucose](http://purl.obolibrary.org/obo/GO_0009749) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17234](http://purl.obolibrary.org/obo/CHEBI_17234) - - -### response to glycine `http://purl.obolibrary.org/obo/GO_1905429` -#### Removed -- [response to glycine](http://purl.obolibrary.org/obo/GO_1905429) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - -- [response to glycine](http://purl.obolibrary.org/obo/GO_1905429) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305) - -#### Added -- [response to glycine](http://purl.obolibrary.org/obo/GO_1905429) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305)) - -- [response to glycine](http://purl.obolibrary.org/obo/GO_1905429) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_57305](http://purl.obolibrary.org/obo/CHEBI_57305) - - -### response to glycoprotein `http://purl.obolibrary.org/obo/GO_1904587` -#### Removed -- [response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904587) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - -- [response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904587) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089) - -#### Added -- [response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904587) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089)) - -- [response to glycoprotein](http://purl.obolibrary.org/obo/GO_1904587) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17089](http://purl.obolibrary.org/obo/CHEBI_17089) - - -### response to hexose `http://purl.obolibrary.org/obo/GO_0009746` -#### Removed -- [response to hexose](http://purl.obolibrary.org/obo/GO_0009746) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133)) - -- [response to hexose](http://purl.obolibrary.org/obo/GO_0009746) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133) - -#### Added -- [response to hexose](http://purl.obolibrary.org/obo/GO_0009746) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133)) - -- [response to hexose](http://purl.obolibrary.org/obo/GO_0009746) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18133](http://purl.obolibrary.org/obo/CHEBI_18133) - - -### response to histamine `http://purl.obolibrary.org/obo/GO_0034776` -#### Removed -- [response to histamine](http://purl.obolibrary.org/obo/GO_0034776) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [response to histamine](http://purl.obolibrary.org/obo/GO_0034776) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - -#### Added -- [response to histamine](http://purl.obolibrary.org/obo/GO_0034776) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432)) - -- [response to histamine](http://purl.obolibrary.org/obo/GO_0034776) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_58432](http://purl.obolibrary.org/obo/CHEBI_58432) - - -### response to inorganic substance `http://purl.obolibrary.org/obo/GO_0010035` -#### Removed -- [response to inorganic substance](http://purl.obolibrary.org/obo/GO_0010035) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835)) - -- [response to inorganic substance](http://purl.obolibrary.org/obo/GO_0010035) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835) - -#### Added -- [response to inorganic substance](http://purl.obolibrary.org/obo/GO_0010035) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835)) - -- [response to inorganic substance](http://purl.obolibrary.org/obo/GO_0010035) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24835](http://purl.obolibrary.org/obo/CHEBI_24835) - - -### response to insulin `http://purl.obolibrary.org/obo/GO_0032868` -#### Removed -- [response to insulin](http://purl.obolibrary.org/obo/GO_0032868) EquivalentTo [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [response to insulin](http://purl.obolibrary.org/obo/GO_0032868) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - -#### Added -- [response to insulin](http://purl.obolibrary.org/obo/GO_0032868) EquivalentTo [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054)) - -- [response to insulin](http://purl.obolibrary.org/obo/GO_0032868) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [insulin gene translation product](http://purl.obolibrary.org/obo/PR_000009054) - - -### response to iron ion `http://purl.obolibrary.org/obo/GO_0010039` -#### Removed -- [response to iron ion](http://purl.obolibrary.org/obo/GO_0010039) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [response to iron ion](http://purl.obolibrary.org/obo/GO_0010039) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - -#### Added -- [response to iron ion](http://purl.obolibrary.org/obo/GO_0010039) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875)) - -- [response to iron ion](http://purl.obolibrary.org/obo/GO_0010039) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_24875](http://purl.obolibrary.org/obo/CHEBI_24875) - - -### response to ketone `http://purl.obolibrary.org/obo/GO_1901654` -#### Removed -- [response to ketone](http://purl.obolibrary.org/obo/GO_1901654) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087)) - -- [response to ketone](http://purl.obolibrary.org/obo/GO_1901654) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087) - -#### Added -- [response to ketone](http://purl.obolibrary.org/obo/GO_1901654) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087)) - -- [response to ketone](http://purl.obolibrary.org/obo/GO_1901654) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17087](http://purl.obolibrary.org/obo/CHEBI_17087) - - -### response to light stimulus `http://purl.obolibrary.org/obo/GO_0009416` -#### Removed -- [response to light stimulus](http://purl.obolibrary.org/obo/GO_0009416) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30212](http://purl.obolibrary.org/obo/CHEBI_30212)) - -- [response to light stimulus](http://purl.obolibrary.org/obo/GO_0009416) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_30212](http://purl.obolibrary.org/obo/CHEBI_30212) - -#### Added -- [response to light stimulus](http://purl.obolibrary.org/obo/GO_0009416) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30212](http://purl.obolibrary.org/obo/CHEBI_30212)) - -- [response to light stimulus](http://purl.obolibrary.org/obo/GO_0009416) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_30212](http://purl.obolibrary.org/obo/CHEBI_30212) - - -### response to lipid `http://purl.obolibrary.org/obo/GO_0033993` -#### Removed -- [response to lipid](http://purl.obolibrary.org/obo/GO_0033993) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - -- [response to lipid](http://purl.obolibrary.org/obo/GO_0033993) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059) - -#### Added -- [response to lipid](http://purl.obolibrary.org/obo/GO_0033993) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059)) - -- [response to lipid](http://purl.obolibrary.org/obo/GO_0033993) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18059](http://purl.obolibrary.org/obo/CHEBI_18059) - - -### response to lipoprotein particle `http://purl.obolibrary.org/obo/GO_0055094` -#### Removed -- [response to lipoprotein particle](http://purl.obolibrary.org/obo/GO_0055094) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495)) - -- [response to lipoprotein particle](http://purl.obolibrary.org/obo/GO_0055094) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495) - -#### Added -- [response to lipoprotein particle](http://purl.obolibrary.org/obo/GO_0055094) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495)) - -- [response to lipoprotein particle](http://purl.obolibrary.org/obo/GO_0055094) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_6495](http://purl.obolibrary.org/obo/CHEBI_6495) - - -### response to mineralocorticoid `http://purl.obolibrary.org/obo/GO_0051385` -#### Removed -- [response to mineralocorticoid](http://purl.obolibrary.org/obo/GO_0051385) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354)) - -- [response to mineralocorticoid](http://purl.obolibrary.org/obo/GO_0051385) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354) - -#### Added -- [response to mineralocorticoid](http://purl.obolibrary.org/obo/GO_0051385) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354)) - -- [response to mineralocorticoid](http://purl.obolibrary.org/obo/GO_0051385) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25354](http://purl.obolibrary.org/obo/CHEBI_25354) - - -### response to nitric oxide `http://purl.obolibrary.org/obo/GO_0071731` -#### Removed -- [response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071731) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480)) - -- [response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071731) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480) - -#### Added -- [response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071731) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480)) - -- [response to nitric oxide](http://purl.obolibrary.org/obo/GO_0071731) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16480](http://purl.obolibrary.org/obo/CHEBI_16480) - - -### response to nitrogen compound `http://purl.obolibrary.org/obo/GO_1901698` -#### Removed -- [response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901698) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - -- [response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901698) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143) - -#### Added -- [response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901698) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143)) - -- [response to nitrogen compound](http://purl.obolibrary.org/obo/GO_1901698) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_51143](http://purl.obolibrary.org/obo/CHEBI_51143) - - -### response to norepinephrine `http://purl.obolibrary.org/obo/GO_0071873` -#### Removed -- [response to norepinephrine](http://purl.obolibrary.org/obo/GO_0071873) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - -- [response to norepinephrine](http://purl.obolibrary.org/obo/GO_0071873) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587) - -#### Added -- [response to norepinephrine](http://purl.obolibrary.org/obo/GO_0071873) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587)) - -- [response to norepinephrine](http://purl.obolibrary.org/obo/GO_0071873) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_72587](http://purl.obolibrary.org/obo/CHEBI_72587) - - -### response to organic cyclic compound `http://purl.obolibrary.org/obo/GO_0014070` -#### Removed -- [response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0014070) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - -- [response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0014070) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832) - -#### Added -- [response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0014070) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832)) - -- [response to organic cyclic compound](http://purl.obolibrary.org/obo/GO_0014070) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_33832](http://purl.obolibrary.org/obo/CHEBI_33832) - - -### response to organic substance `http://purl.obolibrary.org/obo/GO_0010033` -#### Removed -- [response to organic substance](http://purl.obolibrary.org/obo/GO_0010033) EquivalentTo [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_50860](http://purl.obolibrary.org/obo/CHEBI_50860)) - -- [response to organic substance](http://purl.obolibrary.org/obo/GO_0010033) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_50860](http://purl.obolibrary.org/obo/CHEBI_50860) - -#### Added -- [response to organic substance](http://purl.obolibrary.org/obo/GO_0010033) EquivalentTo [response to chemical](http://purl.obolibrary.org/obo/GO_0042221) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_50860](http://purl.obolibrary.org/obo/CHEBI_50860)) - -- [response to organic substance](http://purl.obolibrary.org/obo/GO_0010033) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_50860](http://purl.obolibrary.org/obo/CHEBI_50860) - - -### response to organonitrogen compound `http://purl.obolibrary.org/obo/GO_0010243` -#### Removed -- [response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0010243) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352)) - -- [response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0010243) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352) - -#### Added -- [response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0010243) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352)) - -- [response to organonitrogen compound](http://purl.obolibrary.org/obo/GO_0010243) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35352](http://purl.obolibrary.org/obo/CHEBI_35352) - - -### response to oxygen-containing compound `http://purl.obolibrary.org/obo/GO_1901700` -#### Removed -- [response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901700) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806)) - -- [response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901700) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806) - -#### Added -- [response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901700) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806)) - -- [response to oxygen-containing compound](http://purl.obolibrary.org/obo/GO_1901700) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25806](http://purl.obolibrary.org/obo/CHEBI_25806) - - -### response to peptide `http://purl.obolibrary.org/obo/GO_1901652` -#### Removed -- [response to peptide](http://purl.obolibrary.org/obo/GO_1901652) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [response to peptide](http://purl.obolibrary.org/obo/GO_1901652) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - -#### Added -- [response to peptide](http://purl.obolibrary.org/obo/GO_1901652) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670)) - -- [response to peptide](http://purl.obolibrary.org/obo/GO_1901652) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_16670](http://purl.obolibrary.org/obo/CHEBI_16670) - - -### response to peptide hormone `http://purl.obolibrary.org/obo/GO_0043434` -#### Removed -- [response to peptide hormone](http://purl.obolibrary.org/obo/GO_0043434) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - -- [response to peptide hormone](http://purl.obolibrary.org/obo/GO_0043434) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905) - -#### Added -- [response to peptide hormone](http://purl.obolibrary.org/obo/GO_0043434) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905)) - -- [response to peptide hormone](http://purl.obolibrary.org/obo/GO_0043434) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_25905](http://purl.obolibrary.org/obo/CHEBI_25905) - - -### response to progesterone `http://purl.obolibrary.org/obo/GO_0032570` -#### Removed -- [response to progesterone](http://purl.obolibrary.org/obo/GO_0032570) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026)) - -- [response to progesterone](http://purl.obolibrary.org/obo/GO_0032570) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026) - -#### Added -- [response to progesterone](http://purl.obolibrary.org/obo/GO_0032570) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026)) - -- [response to progesterone](http://purl.obolibrary.org/obo/GO_0032570) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17026](http://purl.obolibrary.org/obo/CHEBI_17026) - - -### response to serotonin `http://purl.obolibrary.org/obo/GO_1904014` -#### Removed -- [response to serotonin](http://purl.obolibrary.org/obo/GO_1904014) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [response to serotonin](http://purl.obolibrary.org/obo/GO_1904014) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - -#### Added -- [response to serotonin](http://purl.obolibrary.org/obo/GO_1904014) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [response to serotonin](http://purl.obolibrary.org/obo/GO_1904014) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - - -### response to steroid hormone `http://purl.obolibrary.org/obo/GO_0048545` -#### Removed -- [response to steroid hormone](http://purl.obolibrary.org/obo/GO_0048545) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [response to steroid hormone](http://purl.obolibrary.org/obo/GO_0048545) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - -#### Added -- [response to steroid hormone](http://purl.obolibrary.org/obo/GO_0048545) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [response to steroid hormone](http://purl.obolibrary.org/obo/GO_0048545) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - - -### response to superoxide `http://purl.obolibrary.org/obo/GO_0000303` -#### Removed -- [response to superoxide](http://purl.obolibrary.org/obo/GO_0000303) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421)) - -- [response to superoxide](http://purl.obolibrary.org/obo/GO_0000303) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421) - -#### Added -- [response to superoxide](http://purl.obolibrary.org/obo/GO_0000303) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421)) - -- [response to superoxide](http://purl.obolibrary.org/obo/GO_0000303) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_18421](http://purl.obolibrary.org/obo/CHEBI_18421) - - -### response to testosterone `http://purl.obolibrary.org/obo/GO_0033574` -#### Removed -- [response to testosterone](http://purl.obolibrary.org/obo/GO_0033574) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347)) - -- [response to testosterone](http://purl.obolibrary.org/obo/GO_0033574) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347) - -#### Added -- [response to testosterone](http://purl.obolibrary.org/obo/GO_0033574) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347)) - -- [response to testosterone](http://purl.obolibrary.org/obo/GO_0033574) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_17347](http://purl.obolibrary.org/obo/CHEBI_17347) - - -### response to vasopressin `http://purl.obolibrary.org/obo/GO_1904116` -#### Removed -- [response to vasopressin](http://purl.obolibrary.org/obo/GO_1904116) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - -- [response to vasopressin](http://purl.obolibrary.org/obo/GO_1904116) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937) - -#### Added -- [response to vasopressin](http://purl.obolibrary.org/obo/GO_1904116) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - -- [response to vasopressin](http://purl.obolibrary.org/obo/GO_1904116) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937) - - -### response to water `http://purl.obolibrary.org/obo/GO_0009415` -#### Removed -- [response to water](http://purl.obolibrary.org/obo/GO_0009415) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - -- [response to water](http://purl.obolibrary.org/obo/GO_0009415) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377) - -#### Added -- [response to water](http://purl.obolibrary.org/obo/GO_0009415) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377)) - -- [response to water](http://purl.obolibrary.org/obo/GO_0009415) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_15377](http://purl.obolibrary.org/obo/CHEBI_15377) - - -### response to yeast `http://purl.obolibrary.org/obo/GO_0001878` -#### Removed -- [response to yeast](http://purl.obolibrary.org/obo/GO_0001878) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [Saccharomycotina](http://purl.obolibrary.org/obo/NCBITaxon_147537)) - -- [response to yeast](http://purl.obolibrary.org/obo/GO_0001878) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [Saccharomycotina](http://purl.obolibrary.org/obo/NCBITaxon_147537) - -#### Added -- [response to yeast](http://purl.obolibrary.org/obo/GO_0001878) EquivalentTo [response to stimulus](http://purl.obolibrary.org/obo/GO_0050896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Saccharomycotina](http://purl.obolibrary.org/obo/NCBITaxon_147537)) - -- [response to yeast](http://purl.obolibrary.org/obo/GO_0001878) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [Saccharomycotina](http://purl.obolibrary.org/obo/NCBITaxon_147537) - - -### rete testis `http://purl.obolibrary.org/obo/UBERON_0003959` -#### Removed -- [rete testis](http://purl.obolibrary.org/obo/UBERON_0003959) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [rete testis](http://purl.obolibrary.org/obo/UBERON_0003959) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### reticular formation `http://purl.obolibrary.org/obo/UBERON_0002275` -#### Removed -- [reticular formation](http://purl.obolibrary.org/obo/UBERON_0002275) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [reticular formation](http://purl.obolibrary.org/obo/UBERON_0002275) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### retina `http://purl.obolibrary.org/obo/UBERON_0000966` -#### Removed -- [retina](http://purl.obolibrary.org/obo/UBERON_0000966) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000152" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [retina](http://purl.obolibrary.org/obo/UBERON_0000966) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [retina](http://purl.obolibrary.org/obo/UBERON_0000966) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [retina](http://purl.obolibrary.org/obo/UBERON_0000966) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "retinas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000152" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### rhombomere `http://purl.obolibrary.org/obo/UBERON_0001892` -#### Removed -- [rhombomere](http://purl.obolibrary.org/obo/UBERON_0001892) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "hindbrain neuromeres" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:HNM" - -- [rhombomere](http://purl.obolibrary.org/obo/UBERON_0001892) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "rhombomeres" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000672" - -#### Added -- [rhombomere](http://purl.obolibrary.org/obo/UBERON_0001892) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "rhombomeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0000672" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [rhombomere](http://purl.obolibrary.org/obo/UBERON_0001892) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "hindbrain neuromeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:HNM" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### rhombomere 1 `http://purl.obolibrary.org/obo/UBERON_0005499` -#### Removed -- [rhombomere 1](http://purl.obolibrary.org/obo/UBERON_0005499) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "r1" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001031" - -#### Added -- [rhombomere 1](http://purl.obolibrary.org/obo/UBERON_0005499) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "r1" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001031" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### rib `http://purl.obolibrary.org/obo/UBERON_0002228` -#### Removed -- [rib](http://purl.obolibrary.org/obo/UBERON_0002228) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ribs" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000538" - -#### Added -- [rib](http://purl.obolibrary.org/obo/UBERON_0002228) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ribs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000538" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### ribonucleoprotein complex binding `http://purl.obolibrary.org/obo/GO_0043021` -#### Removed -- [ribonucleoprotein complex binding](http://purl.obolibrary.org/obo/GO_0043021) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [ribonucleoprotein complex](http://purl.obolibrary.org/obo/GO_1990904)) - -- [ribonucleoprotein complex binding](http://purl.obolibrary.org/obo/GO_0043021) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [ribonucleoprotein complex](http://purl.obolibrary.org/obo/GO_1990904) - -#### Added -- [ribonucleoprotein complex binding](http://purl.obolibrary.org/obo/GO_0043021) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [ribonucleoprotein complex](http://purl.obolibrary.org/obo/GO_1990904)) - -- [ribonucleoprotein complex binding](http://purl.obolibrary.org/obo/GO_0043021) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [ribonucleoprotein complex](http://purl.obolibrary.org/obo/GO_1990904) - - -### ribosome binding `http://purl.obolibrary.org/obo/GO_0043022` -#### Removed -- [ribosome binding](http://purl.obolibrary.org/obo/GO_0043022) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [ribosome](http://purl.obolibrary.org/obo/GO_0005840)) - -- [ribosome binding](http://purl.obolibrary.org/obo/GO_0043022) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [ribosome](http://purl.obolibrary.org/obo/GO_0005840) - -#### Added -- [ribosome binding](http://purl.obolibrary.org/obo/GO_0043022) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [ribosome](http://purl.obolibrary.org/obo/GO_0005840)) - -- [ribosome binding](http://purl.obolibrary.org/obo/GO_0043022) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [ribosome](http://purl.obolibrary.org/obo/GO_0005840) - - -### right atrium valve `http://purl.obolibrary.org/obo/UBERON_0005208` -#### Removed -- [right atrium valve](http://purl.obolibrary.org/obo/UBERON_0005208) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "right atrium valves" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0000302" - -#### Added -- [right atrium valve](http://purl.obolibrary.org/obo/UBERON_0005208) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "right atrium valves" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EHDAA2:0000302" - - -### right bundle branch `http://purl.obolibrary.org/obo/UBERON_0005987` -#### Removed -- [right bundle branch](http://purl.obolibrary.org/obo/UBERON_0005987) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "RBB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [right bundle branch](http://purl.obolibrary.org/obo/UBERON_0005987) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "RBB" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### right cardiac atrium `http://purl.obolibrary.org/obo/UBERON_0002078` -#### Removed -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -#### Added -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right cardiac atrium](http://purl.obolibrary.org/obo/UBERON_0002078) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right cerebral hemisphere `http://purl.obolibrary.org/obo/UBERON_0002813` -#### Removed -- [right cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002813) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [right cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002813) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [right cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002813) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right cerebral hemisphere](http://purl.obolibrary.org/obo/UBERON_0002813) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right common carotid artery plus branches `http://purl.obolibrary.org/obo/UBERON_0001531` -#### Removed -- [right common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001531) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [right common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001531) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right eye `http://purl.obolibrary.org/obo/UBERON_0004549` -#### Removed -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb" - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" - -#### Added -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right kidney `http://purl.obolibrary.org/obo/UBERON_0004539` -#### Removed -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Kidney_Right.glb" - -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb" - -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb" - -#### Added -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Kidney_Right.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right lobe of liver `http://purl.obolibrary.org/obo/UBERON_0001114` -#### Removed -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb" - -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb" - -#### Added -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray1087-liver.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right lung `http://purl.obolibrary.org/obo/UBERON_0002167` -#### Removed -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/32/Gray972.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/32/Gray972.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right nipple `http://purl.obolibrary.org/obo/UBERON_0013773` -#### Removed -- [right nipple](http://purl.obolibrary.org/obo/UBERON_0013773) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-r.glb" - -#### Added -- [right nipple](http://purl.obolibrary.org/obo/UBERON_0013773) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0001651` -#### Removed -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right putamen `http://purl.obolibrary.org/obo/UBERON_0008885` -#### Removed -- [right putamen](http://purl.obolibrary.org/obo/UBERON_0008885) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -- [right putamen](http://purl.obolibrary.org/obo/UBERON_0008885) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -#### Added -- [right putamen](http://purl.obolibrary.org/obo/UBERON_0008885) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right putamen](http://purl.obolibrary.org/obo/UBERON_0008885) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right renal artery `http://purl.obolibrary.org/obo/UBERON_0001185` -#### Removed -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right renal vein `http://purl.obolibrary.org/obo/UBERON_0001141` -#### Removed -- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right subclavian artery `http://purl.obolibrary.org/obo/UBERON_0001534` -#### Removed -- [right subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001534) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [right subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001534) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right thymus lobe `http://purl.obolibrary.org/obo/UBERON_0005469` -#### Removed -- [right thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005469) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb" - -- [right thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005469) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb" - -#### Added -- [right thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005469) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right thymus lobe](http://purl.obolibrary.org/obo/UBERON_0005469) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right ureter `http://purl.obolibrary.org/obo/UBERON_0001222` -#### Removed -- [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_R.glb" - -- [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Ureter_R.glb" - -#### Added -- [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Ureter_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Ureter_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### right uterine tube `http://purl.obolibrary.org/obo/UBERON_0001302` -#### Removed -- [right uterine tube](http://purl.obolibrary.org/obo/UBERON_0001302) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Fallopian_Tube_R.glb" - -#### Added -- [right uterine tube](http://purl.obolibrary.org/obo/UBERON_0001302) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Fallopian_Tube_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### saccule of membranous labyrinth `http://purl.obolibrary.org/obo/UBERON_0001854` -#### Removed -- [saccule of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001854) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [saccule of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001854) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### saliva-secreting gland `http://purl.obolibrary.org/obo/UBERON_0001044` -#### Removed -- [saliva-secreting gland](http://purl.obolibrary.org/obo/UBERON_0001044) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [saliva-secreting gland](http://purl.obolibrary.org/obo/UBERON_0001044) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### scala media `http://purl.obolibrary.org/obo/UBERON_0002295` -#### Removed -- [scala media](http://purl.obolibrary.org/obo/UBERON_0002295) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [scala media](http://purl.obolibrary.org/obo/UBERON_0002295) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### scalp `http://purl.obolibrary.org/obo/UBERON_0000403` -#### Removed -- [scalp](http://purl.obolibrary.org/obo/UBERON_0000403) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/eb/Double_cowlick.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [scalp](http://purl.obolibrary.org/obo/UBERON_0000403) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Layers_of_the_scalp_and_meninges.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [scalp](http://purl.obolibrary.org/obo/UBERON_0000403) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Layers_of_the_scalp_and_meninges.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [scalp](http://purl.obolibrary.org/obo/UBERON_0000403) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/eb/Double_cowlick.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### scapula `http://purl.obolibrary.org/obo/UBERON_0006849` -#### Removed -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "scapulas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000583" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "scapulae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000583" - -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "scapulae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000583" - -- [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "scapulas" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000583" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### sciatic nerve `http://purl.obolibrary.org/obo/UBERON_0001322` -#### Removed -- [sciatic nerve](http://purl.obolibrary.org/obo/UBERON_0001322) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sciatic nerve](http://purl.obolibrary.org/obo/UBERON_0001322) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sclera `http://purl.obolibrary.org/obo/UBERON_0001773` -#### Removed -- [sclera](http://purl.obolibrary.org/obo/UBERON_0001773) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sclera](http://purl.obolibrary.org/obo/UBERON_0001773) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sclerotome `http://purl.obolibrary.org/obo/UBERON_0003089` -#### Removed -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sclerotomes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001080" - -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sclerotomes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001080" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006255" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### sebaceous gland `http://purl.obolibrary.org/obo/UBERON_0001821` -#### Removed -- [sebaceous gland](http://purl.obolibrary.org/obo/UBERON_0001821) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/49/HairFollicle.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sebaceous gland](http://purl.obolibrary.org/obo/UBERON_0001821) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/49/HairFollicle.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### secondary nodular lymphoid tissue `http://purl.obolibrary.org/obo/UBERON_0001745` -#### Removed -- [secondary nodular lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0001745) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Keimzentrum.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [secondary nodular lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0001745) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Keimzentrum.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### secondary pulmonary lobule `http://purl.obolibrary.org/obo/UBERON_0010369` - -#### Added -- [secondary pulmonary lobule](http://purl.obolibrary.org/obo/UBERON_0010369) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) - -- [secondary pulmonary lobule](http://purl.obolibrary.org/obo/UBERON_0010369) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "respiratory lobule" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:18403324" - - -### secretion of lacrimal gland `http://purl.obolibrary.org/obo/UBERON_0001827` -#### Removed -- [secretion of lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001827) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tears" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [secretion of lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001827) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tears" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### seeAlso `http://www.geneontology.org/formats/oboInOwl#seeAlso` -#### Removed -- AnnotationProperty: [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) - - - -### segmental bronchus `http://purl.obolibrary.org/obo/UBERON_0002184` -#### Removed -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### semen `http://purl.obolibrary.org/obo/UBERON_0001968` -#### Removed -- [semen](http://purl.obolibrary.org/obo/UBERON_0001968) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/40/Human_semen_in_petri_dish2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [semen](http://purl.obolibrary.org/obo/UBERON_0001968) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/40/Human_semen_in_petri_dish2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### semicircular canal `http://purl.obolibrary.org/obo/UBERON_0001840` -#### Removed -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "semicircular ducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000198" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "semicircular canals" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000431" - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Balance_Disorder_Illustration_A.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ductus semicirculares" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71880" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003383" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -#### Added -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Balance_Disorder_Illustration_A.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "semicircular canals" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000431" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "semicircular ducts" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000198" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [semicircular canal](http://purl.obolibrary.org/obo/UBERON_0001840) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ductus semicirculares" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71880" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003383" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - - -### semicircular canal ampulla `http://purl.obolibrary.org/obo/UBERON_0004043` -#### Removed -- [semicircular canal ampulla](http://purl.obolibrary.org/obo/UBERON_0004043) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/65/Vestibular_system%27s_semicircular_canal-_a_cross-section.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [semicircular canal ampulla](http://purl.obolibrary.org/obo/UBERON_0004043) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/65/Vestibular_system%27s_semicircular_canal-_a_cross-section.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### semicircular duct `http://purl.obolibrary.org/obo/UBERON_0001856` -#### Removed -- [semicircular duct](http://purl.obolibrary.org/obo/UBERON_0001856) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ductus semicirculares" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71880" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -#### Added -- [semicircular duct](http://purl.obolibrary.org/obo/UBERON_0001856) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ductus semicirculares" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71880" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - - -### seminal fluid `http://purl.obolibrary.org/obo/UBERON_0006530` -#### Removed -- [seminal fluid](http://purl.obolibrary.org/obo/UBERON_0006530) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "milt" - - [IAO_0000232](http://www.geneontology.org/formats/oboInOwl#http://purl.obolibrary.org/obo/IAO_0000232) "A secretion from the glands of the male reproductive system in some aquatic animals that contains sperm and is sprayed onto the eggs." - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31287811" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:35203131" - -#### Added -- [seminal fluid](http://purl.obolibrary.org/obo/UBERON_0006530) [has narrow synonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "milt" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31287811" - - - [comment](http://www.w3.org/2000/01/rdf-schema#comment) "CURATOR NOTE A secretion from the glands of the male reproductive system in some aquatic animals that contains sperm and is sprayed onto the eggs." - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:35203131" - - -### seminal fluid secreting cell `http://purl.obolibrary.org/obo/CL_0000321` -#### Removed -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [label](http://www.w3.org/2000/01/rdf-schema#label) "seminal fluid secreting cell" - -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) SubClassOf [secretory cell](http://purl.obolibrary.org/obo/CL_0000151) - -#### Added -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [term replaced by](http://purl.obolibrary.org/obo/IAO_0100001) [secretory cell](http://purl.obolibrary.org/obo/CL_0000151) - -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "https://github.com/obophenotype/cell-ontology/issues/1149" - -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [seminal vesicle glandular cell](http://purl.obolibrary.org/obo/CL_1001597) - -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [deprecated](http://www.w3.org/2002/07/owl#deprecated) true - -- [seminal fluid secreting cell](http://purl.obolibrary.org/obo/CL_0000321) [label](http://www.w3.org/2000/01/rdf-schema#label) "obsolete seminal fluid secreting cell" - - -### seminal vesicle `http://purl.obolibrary.org/obo/UBERON_0000998` -#### Removed -- [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb" - -- [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### seminiferous tubule of testis `http://purl.obolibrary.org/obo/UBERON_0001343` -#### Removed -- [seminiferous tubule of testis](http://purl.obolibrary.org/obo/UBERON_0001343) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/49/Seminiferous_tubule_and_sperm_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [seminiferous tubule of testis](http://purl.obolibrary.org/obo/UBERON_0001343) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6a/Gray1145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [seminiferous tubule of testis](http://purl.obolibrary.org/obo/UBERON_0001343) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/49/Seminiferous_tubule_and_sperm_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [seminiferous tubule of testis](http://purl.obolibrary.org/obo/UBERON_0001343) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6a/Gray1145.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sense organ `http://purl.obolibrary.org/obo/UBERON_0000020` -#### Removed -- [sense organ](http://purl.obolibrary.org/obo/UBERON_0000020) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sense organ](http://purl.obolibrary.org/obo/UBERON_0000020) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sensory circumventricular organ `http://purl.obolibrary.org/obo/UBERON_0010135` -#### Removed -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensitive circumventricular organs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensitive organs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensory CVOs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "humerosensory system" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "humerosensory system" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensory CVOs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensitive circumventricular organs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [sensory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010135) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sensitive organs" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NeuroNames:2856" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### sensory ganglion `http://purl.obolibrary.org/obo/UBERON_0001800` - -#### Added -- [sensory ganglion](http://purl.obolibrary.org/obo/UBERON_0001800) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [sensory ganglion](http://purl.obolibrary.org/obo/UBERON_0001800) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### sensory system `http://purl.obolibrary.org/obo/UBERON_0001032` -#### Removed -- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sensory systems" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000282" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sensory systems" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0000282" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### septum `http://purl.obolibrary.org/obo/UBERON_0003037` -#### Removed -- [septum](http://purl.obolibrary.org/obo/UBERON_0003037) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [septum](http://purl.obolibrary.org/obo/UBERON_0003037) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "septa" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### septum of telencephalon `http://purl.obolibrary.org/obo/UBERON_0000446` -#### Removed -- [septum of telencephalon](http://purl.obolibrary.org/obo/UBERON_0000446) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Se" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - -#### Added -- [septum of telencephalon](http://purl.obolibrary.org/obo/UBERON_0000446) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "Se" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23375746" - - -### serosa of uterus `http://purl.obolibrary.org/obo/UBERON_0001297` -#### Removed -- [serosa of uterus](http://purl.obolibrary.org/obo/UBERON_0001297) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [serosa of uterus](http://purl.obolibrary.org/obo/UBERON_0001297) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### serotonin binding `http://purl.obolibrary.org/obo/GO_0051378` -#### Removed -- [serotonin binding](http://purl.obolibrary.org/obo/GO_0051378) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [serotonin binding](http://purl.obolibrary.org/obo/GO_0051378) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - -#### Added -- [serotonin binding](http://purl.obolibrary.org/obo/GO_0051378) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [serotonin binding](http://purl.obolibrary.org/obo/GO_0051378) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - - -### serotonin receptor activity `http://purl.obolibrary.org/obo/GO_0099589` -#### Removed -- [serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0099589) EquivalentTo [transmembrane signaling receptor activity](http://purl.obolibrary.org/obo/GO_0004888) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0099589) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - -#### Added -- [serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0099589) EquivalentTo [transmembrane signaling receptor activity](http://purl.obolibrary.org/obo/GO_0004888) and ([has small molecule activator](http://purl.obolibrary.org/obo/RO_0012001) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546)) - -- [serotonin receptor activity](http://purl.obolibrary.org/obo/GO_0099589) SubClassOf [has small molecule activator](http://purl.obolibrary.org/obo/RO_0012001) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - - -### serotonin-gated monoatomic cation channel activity `http://purl.obolibrary.org/obo/GO_0022850` -#### Removed -- [serotonin-gated monoatomic cation channel activity](http://purl.obolibrary.org/obo/GO_0022850) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:0815340729" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mtg_transport" - -- [serotonin-gated monoatomic cation channel activity](http://purl.obolibrary.org/obo/GO_0022850) SubClassOf [has small molecule activator](http://purl.obolibrary.org/obo/RO_0012001) some [CHEBI_350546](http://purl.obolibrary.org/obo/CHEBI_350546) - -#### Added -- [serotonin-gated monoatomic cation channel activity](http://purl.obolibrary.org/obo/GO_0022850) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:mtg_transport" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:12867984" - - -### serous gland `http://purl.obolibrary.org/obo/UBERON_0000409` -#### Removed -- [serous gland](http://purl.obolibrary.org/obo/UBERON_0000409) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [serous gland](http://purl.obolibrary.org/obo/UBERON_0000409) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray1021.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### serous membrane `http://purl.obolibrary.org/obo/UBERON_0000042` -#### Removed -- [serous membrane](http://purl.obolibrary.org/obo/UBERON_0000042) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [serous membrane](http://purl.obolibrary.org/obo/UBERON_0000042) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [serous membrane](http://purl.obolibrary.org/obo/UBERON_0000042) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [serous membrane](http://purl.obolibrary.org/obo/UBERON_0000042) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### serous sac `http://purl.obolibrary.org/obo/UBERON_0005906` -#### Removed -- [serous sac](http://purl.obolibrary.org/obo/UBERON_0005906) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:16060" - -- [serous sac](http://purl.obolibrary.org/obo/UBERON_0005906) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000005" - - - -### serratus ventralis `http://purl.obolibrary.org/obo/UBERON_0001125` -#### Removed -- [serratus ventralis](http://purl.obolibrary.org/obo/UBERON_0001125) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/c6/Serratus_anterior.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [serratus ventralis](http://purl.obolibrary.org/obo/UBERON_0001125) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/c6/Serratus_anterior.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sesamoid bone `http://purl.obolibrary.org/obo/UBERON_0001479` -#### Removed -- [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray350.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray350.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sexually immature organism `http://purl.obolibrary.org/obo/UBERON_0007021` -#### Removed -- [sexually immature organism](http://purl.obolibrary.org/obo/UBERON_0007021) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "juveniles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002047" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [sexually immature organism](http://purl.obolibrary.org/obo/UBERON_0007021) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "juveniles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0002047" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### shoulder `http://purl.obolibrary.org/obo/UBERON_0001467` -#### Removed -- [shoulder](http://purl.obolibrary.org/obo/UBERON_0001467) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/90/Shoulderjoint.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [shoulder](http://purl.obolibrary.org/obo/UBERON_0001467) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/90/Shoulderjoint.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sigmoid colon `http://purl.obolibrary.org/obo/UBERON_0001159` -#### Removed -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### simple columnar epithelium `http://purl.obolibrary.org/obo/UBERON_0000485` -#### Removed -- [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray1059.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple columnar epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001496" - -#### Added -- [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray1059.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple columnar epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001496" - - -### simple cuboidal epithelium `http://purl.obolibrary.org/obo/UBERON_0000484` -#### Removed -- [simple cuboidal epithelium](http://purl.obolibrary.org/obo/UBERON_0000484) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple cuboidal epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001497" - -- [simple cuboidal epithelium](http://purl.obolibrary.org/obo/UBERON_0000484) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d0/Gray1133.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [simple cuboidal epithelium](http://purl.obolibrary.org/obo/UBERON_0000484) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d0/Gray1133.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [simple cuboidal epithelium](http://purl.obolibrary.org/obo/UBERON_0000484) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple cuboidal epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001497" - - -### simple squamous epithelium `http://purl.obolibrary.org/obo/UBERON_0000487` -#### Removed -- [simple squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0000487) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple squamous epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001498" - -- [simple squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0000487) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [simple squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0000487) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [simple squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0000487) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "simple squamous epithelia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001498" - - -### sinoatrial node `http://purl.obolibrary.org/obo/UBERON_0002351` -#### Removed -- [sinoatrial node](http://purl.obolibrary.org/obo/UBERON_0002351) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sinoatrial node](http://purl.obolibrary.org/obo/UBERON_0002351) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sinoatrial node](http://purl.obolibrary.org/obo/UBERON_0002351) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [sinoatrial node](http://purl.obolibrary.org/obo/UBERON_0002351) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sinus venosus `http://purl.obolibrary.org/obo/UBERON_0002063` -#### Removed -- [sinus venosus](http://purl.obolibrary.org/obo/UBERON_0002063) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sinus venosus](http://purl.obolibrary.org/obo/UBERON_0002063) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### skeletal joint `http://purl.obolibrary.org/obo/UBERON_0000982` -#### Removed -- [skeletal joint](http://purl.obolibrary.org/obo/UBERON_0000982) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "joints" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001596" - -#### Added -- [skeletal joint](http://purl.obolibrary.org/obo/UBERON_0000982) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "joints" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001596" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skeletal ligament `http://purl.obolibrary.org/obo/UBERON_0008846` -#### Removed -- [skeletal ligament](http://purl.obolibrary.org/obo/UBERON_0008846) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [skeletal ligament](http://purl.obolibrary.org/obo/UBERON_0008846) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### skeletal muscle satellite cell activation `http://purl.obolibrary.org/obo/GO_0014719` -#### Removed -- [skeletal muscle satellite cell activation](http://purl.obolibrary.org/obo/GO_0014719) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [quiescent skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008012)) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [activated skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008016)) - -- [skeletal muscle satellite cell activation](http://purl.obolibrary.org/obo/GO_0014719) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [quiescent skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008012) - -#### Added -- [skeletal muscle satellite cell activation](http://purl.obolibrary.org/obo/GO_0014719) EquivalentTo [cell activation](http://purl.obolibrary.org/obo/GO_0001775) and ([results in acquisition of features of](http://purl.obolibrary.org/obo/RO_0002315) some [activated skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008016)) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [quiescent skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008012)) - -- [skeletal muscle satellite cell activation](http://purl.obolibrary.org/obo/GO_0014719) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [quiescent skeletal muscle satellite cell](http://purl.obolibrary.org/obo/CL_0008012) - - -### skeletal muscle satellite stem cell asymmetric division `http://purl.obolibrary.org/obo/GO_0014833` -#### Removed -- [skeletal muscle satellite stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0014833) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [skeletal muscle satellite stem cell](http://purl.obolibrary.org/obo/CL_0008011)) - -- [skeletal muscle satellite stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0014833) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [skeletal muscle satellite stem cell](http://purl.obolibrary.org/obo/CL_0008011) - -#### Added -- [skeletal muscle satellite stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0014833) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [skeletal muscle satellite stem cell](http://purl.obolibrary.org/obo/CL_0008011)) - -- [skeletal muscle satellite stem cell asymmetric division](http://purl.obolibrary.org/obo/GO_0014833) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [skeletal muscle satellite stem cell](http://purl.obolibrary.org/obo/CL_0008011) - - -### skeletal muscle tissue `http://purl.obolibrary.org/obo/UBERON_0001134` -#### Removed -- [skeletal muscle tissue](http://purl.obolibrary.org/obo/UBERON_0001134) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/c0/Skeletal_muscle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [skeletal muscle tissue](http://purl.obolibrary.org/obo/UBERON_0001134) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/c0/Skeletal_muscle.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### skeleton of lower jaw `http://purl.obolibrary.org/obo/UBERON_0003278` -#### Removed -- [skeleton of lower jaw](http://purl.obolibrary.org/obo/UBERON_0003278) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mandibles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001273" - -#### Added -- [skeleton of lower jaw](http://purl.obolibrary.org/obo/UBERON_0003278) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "mandibles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001273" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skeleton of manual acropodium `http://purl.obolibrary.org/obo/UBERON_0010688` -#### Removed -- [skeleton of manual acropodium](http://purl.obolibrary.org/obo/UBERON_0010688) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "manual phalanges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:NI" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0005029" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [skeleton of manual acropodium](http://purl.obolibrary.org/obo/UBERON_0010688) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "manual phalanges" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:NI" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VSAO:0005029" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skin bony tubercle `http://purl.obolibrary.org/obo/UBERON_0017163` -#### Removed -- [skin bony tubercle](http://purl.obolibrary.org/obo/UBERON_0017163) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony tubercles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:3b77fb04-1e62-43af-a84b-5d5eb7388525" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [skin bony tubercle](http://purl.obolibrary.org/obo/UBERON_0017163) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony tubercles" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:3b77fb04-1e62-43af-a84b-5d5eb7388525" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skin gland `http://purl.obolibrary.org/obo/UBERON_0002419` -#### Removed -- [skin gland](http://purl.obolibrary.org/obo/UBERON_0002419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin glands set" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [skin gland](http://purl.obolibrary.org/obo/UBERON_0002419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin glands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [skin gland](http://purl.obolibrary.org/obo/UBERON_0002419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin glands" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [skin gland](http://purl.obolibrary.org/obo/UBERON_0002419) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin glands set" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skin of back `http://purl.obolibrary.org/obo/UBERON_0001068` -#### Removed -- [skin of back](http://purl.obolibrary.org/obo/UBERON_0001068) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - -#### Added -- [skin of back](http://purl.obolibrary.org/obo/UBERON_0001068) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - - -### skin of body `http://purl.obolibrary.org/obo/UBERON_0002097` -#### Removed -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Skin.glb" - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Skin.glb" - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-skin.glb" - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_M_Skin.glb" - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Skin.glb" - -#### Added -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_M_Skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### skin of head `http://purl.obolibrary.org/obo/UBERON_0001084` -#### Removed -- [skin of head](http://purl.obolibrary.org/obo/UBERON_0001084) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - -#### Added -- [skin of head](http://purl.obolibrary.org/obo/UBERON_0001084) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - - -### skin of lip `http://purl.obolibrary.org/obo/UBERON_0001458` -#### Removed -- [skin of lip](http://purl.obolibrary.org/obo/UBERON_0001458) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin of lips" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [skin of lip](http://purl.obolibrary.org/obo/UBERON_0001458) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "skin of lips" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### skin of neck `http://purl.obolibrary.org/obo/UBERON_0001417` -#### Removed -- [skin of neck](http://purl.obolibrary.org/obo/UBERON_0001417) SubClassOf [head or neck skin](http://purl.obolibrary.org/obo/UBERON_0012180) - -#### Added -- [skin of neck](http://purl.obolibrary.org/obo/UBERON_0001417) SubClassOf [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) - - -### skin of trunk `http://purl.obolibrary.org/obo/UBERON_0001085` -#### Removed -- [skin of trunk](http://purl.obolibrary.org/obo/UBERON_0001085) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - -#### Added -- [skin of trunk](http://purl.obolibrary.org/obo/UBERON_0001085) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region" - -- [skin of trunk](http://purl.obolibrary.org/obo/UBERON_0001085) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [skin of trunk](http://purl.obolibrary.org/obo/UBERON_0001085) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### slow muscle cell `http://purl.obolibrary.org/obo/CL_0000189` -#### Removed -- [slow muscle cell](http://purl.obolibrary.org/obo/CL_0000189) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:84448" - - - -### small intestine `http://purl.obolibrary.org/obo/UBERON_0002108` -#### Removed -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb" - -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb" - -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### small saphenous vein `http://purl.obolibrary.org/obo/UBERON_0001547` -#### Removed -- [small saphenous vein](http://purl.obolibrary.org/obo/UBERON_0001547) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/62/Gray582.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [small saphenous vein](http://purl.obolibrary.org/obo/UBERON_0001547) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/62/Gray582.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### smooth muscle tissue `http://purl.obolibrary.org/obo/UBERON_0001135` -#### Removed -- [smooth muscle tissue](http://purl.obolibrary.org/obo/UBERON_0001135) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/3b/Glatte_Muskelzellen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [smooth muscle tissue](http://purl.obolibrary.org/obo/UBERON_0001135) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/3b/Glatte_Muskelzellen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### somatic stem cell `http://purl.obolibrary.org/obo/CL_0000723` -#### Removed -- [somatic stem cell](http://purl.obolibrary.org/obo/CL_0000723) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:63368" - - - -### somatic stem cell division `http://purl.obolibrary.org/obo/GO_0048103` -#### Removed -- [somatic stem cell division](http://purl.obolibrary.org/obo/GO_0048103) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [somatic stem cell](http://purl.obolibrary.org/obo/CL_0000723)) - -- [somatic stem cell division](http://purl.obolibrary.org/obo/GO_0048103) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [somatic stem cell](http://purl.obolibrary.org/obo/CL_0000723) - -#### Added -- [somatic stem cell division](http://purl.obolibrary.org/obo/GO_0048103) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [somatic stem cell](http://purl.obolibrary.org/obo/CL_0000723)) - -- [somatic stem cell division](http://purl.obolibrary.org/obo/GO_0048103) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [somatic stem cell](http://purl.obolibrary.org/obo/CL_0000723) - - -### somatopleure `http://purl.obolibrary.org/obo/UBERON_0004874` -#### Removed -- [somatopleure](http://purl.obolibrary.org/obo/UBERON_0004874) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [somatopleure](http://purl.obolibrary.org/obo/UBERON_0004874) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### somatostatin binding `http://purl.obolibrary.org/obo/GO_0120023` -#### Removed -- [somatostatin binding](http://purl.obolibrary.org/obo/GO_0120023) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628)) - -- [somatostatin binding](http://purl.obolibrary.org/obo/GO_0120023) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - -#### Added -- [somatostatin binding](http://purl.obolibrary.org/obo/GO_0120023) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628)) - -- [somatostatin binding](http://purl.obolibrary.org/obo/GO_0120023) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - - -### somatostatin receptor activity `http://purl.obolibrary.org/obo/GO_0004994` -#### Removed -- [somatostatin receptor activity](http://purl.obolibrary.org/obo/GO_0004994) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628)) - -- [somatostatin receptor activity](http://purl.obolibrary.org/obo/GO_0004994) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - -#### Added -- [somatostatin receptor activity](http://purl.obolibrary.org/obo/GO_0004994) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628)) - -- [somatostatin receptor activity](http://purl.obolibrary.org/obo/GO_0004994) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - - -### somatostatin signaling pathway `http://purl.obolibrary.org/obo/GO_0038170` -#### Removed -- [somatostatin signaling pathway](http://purl.obolibrary.org/obo/GO_0038170) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - -#### Added -- [somatostatin signaling pathway](http://purl.obolibrary.org/obo/GO_0038170) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_64628](http://purl.obolibrary.org/obo/CHEBI_64628) - - -### somite `http://purl.obolibrary.org/obo/UBERON_0002329` -#### Removed -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "somites" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk" - -#### Added -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "somites" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [somite](http://purl.obolibrary.org/obo/UBERON_0002329) [IAO_0000232](http://purl.obolibrary.org/obo/IAO_0000232) "EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk" - - -### spermatic cord `http://purl.obolibrary.org/obo/UBERON_0005352` -#### Removed -- [spermatic cord](http://purl.obolibrary.org/obo/UBERON_0005352) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [spermatic cord](http://purl.obolibrary.org/obo/UBERON_0005352) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### spermatocyte division `http://purl.obolibrary.org/obo/GO_0048137` -#### Removed -- [spermatocyte division](http://purl.obolibrary.org/obo/GO_0048137) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [spermatocyte](http://purl.obolibrary.org/obo/CL_0000017)) - -- [spermatocyte division](http://purl.obolibrary.org/obo/GO_0048137) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [spermatocyte](http://purl.obolibrary.org/obo/CL_0000017) - -#### Added -- [spermatocyte division](http://purl.obolibrary.org/obo/GO_0048137) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [spermatocyte](http://purl.obolibrary.org/obo/CL_0000017)) - -- [spermatocyte division](http://purl.obolibrary.org/obo/GO_0048137) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [spermatocyte](http://purl.obolibrary.org/obo/CL_0000017) - - -### spermatogonial cell division `http://purl.obolibrary.org/obo/GO_0007284` -#### Removed -- [spermatogonial cell division](http://purl.obolibrary.org/obo/GO_0007284) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [spermatogonium](http://purl.obolibrary.org/obo/CL_0000020)) - -- [spermatogonial cell division](http://purl.obolibrary.org/obo/GO_0007284) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [spermatogonium](http://purl.obolibrary.org/obo/CL_0000020) - -#### Added -- [spermatogonial cell division](http://purl.obolibrary.org/obo/GO_0007284) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [spermatogonium](http://purl.obolibrary.org/obo/CL_0000020)) - -- [spermatogonial cell division](http://purl.obolibrary.org/obo/GO_0007284) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [spermatogonium](http://purl.obolibrary.org/obo/CL_0000020) - - -### sphenofrontal suture `http://purl.obolibrary.org/obo/UBERON_0010156` -#### Removed -- [sphenofrontal suture](http://purl.obolibrary.org/obo/UBERON_0010156) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sphenofrontal suture](http://purl.obolibrary.org/obo/UBERON_0010156) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sphenoid bone `http://purl.obolibrary.org/obo/UBERON_0001677` -#### Removed -- [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sphincter of hepatopancreatic ampulla `http://purl.obolibrary.org/obo/UBERON_0004915` -#### Removed -- [sphincter of hepatopancreatic ampulla](http://purl.obolibrary.org/obo/UBERON_0004915) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sphincter of hepatopancreatic ampulla](http://purl.obolibrary.org/obo/UBERON_0004915) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/43/Gray1057.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sphincter pupillae `http://purl.obolibrary.org/obo/UBERON_0001607` -#### Removed -- [sphincter pupillae](http://purl.obolibrary.org/obo/UBERON_0001607) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sphincter pupillae](http://purl.obolibrary.org/obo/UBERON_0001607) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### spinal artery `http://purl.obolibrary.org/obo/UBERON_0002458` -#### Removed -- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000682" - -#### Added -- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal arteries" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000682" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### spinal cord `http://purl.obolibrary.org/obo/UBERON_0002240` -#### Removed -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "SpC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb" - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/58/Spinal_cord_direv.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb" - -#### Added -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "SpC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/58/Spinal_cord_direv.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### spinal cord segment `http://purl.obolibrary.org/obo/UBERON_0005844` -#### Removed -- [spinal cord segment](http://purl.obolibrary.org/obo/UBERON_0005844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal neuromeres" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001332" - -#### Added -- [spinal cord segment](http://purl.obolibrary.org/obo/UBERON_0005844) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal neuromeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001332" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### spinal nerve `http://purl.obolibrary.org/obo/UBERON_0001780` -#### Removed -- [spinal nerve](http://purl.obolibrary.org/obo/UBERON_0001780) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal nerves" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:spin" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [spinal nerve](http://purl.obolibrary.org/obo/UBERON_0001780) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [spinal nerve](http://purl.obolibrary.org/obo/UBERON_0001780) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spinal nerve](http://purl.obolibrary.org/obo/UBERON_0001780) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "spinal nerves" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BAMS:spin" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### spinal neuromere `http://purl.obolibrary.org/obo/UBERON_0014777` -#### Removed -- [spinal neuromere](http://purl.obolibrary.org/obo/UBERON_0014777) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal neuromeres" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001332" - -#### Added -- [spinal neuromere](http://purl.obolibrary.org/obo/UBERON_0014777) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "spinal neuromeres" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "TAO:0001332" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### spiral organ of cochlea `http://purl.obolibrary.org/obo/UBERON_0002227` -#### Removed -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "auditory papillae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780387714691" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spiral organ of cochlea](http://purl.obolibrary.org/obo/UBERON_0002227) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "auditory papillae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780387714691" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### splanchnocranium `http://purl.obolibrary.org/obo/UBERON_0008895` -#### Removed -- [splanchnocranium](http://purl.obolibrary.org/obo/UBERON_0008895) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [splanchnocranium](http://purl.obolibrary.org/obo/UBERON_0008895) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### splanchnopleure `http://purl.obolibrary.org/obo/UBERON_0004873` -#### Removed -- [splanchnopleure](http://purl.obolibrary.org/obo/UBERON_0004873) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [splanchnopleure](http://purl.obolibrary.org/obo/UBERON_0004873) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### spleen `http://purl.obolibrary.org/obo/UBERON_0002106` -#### Removed -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spleen.glb" - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Spleen.glb" - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d6/Illu_spleen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spleen.glb" - -#### Added -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Spleen.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spleen.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spleen.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [spleen](http://purl.obolibrary.org/obo/UBERON_0002106) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d6/Illu_spleen.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### splenic artery `http://purl.obolibrary.org/obo/UBERON_0001194` -#### Removed -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -#### Added -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray1188.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### splenic vein `http://purl.obolibrary.org/obo/UBERON_0003713` -#### Removed -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5b/Gray1189.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e4/Bilebladder.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e4/Bilebladder.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5b/Gray1189.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [splenic vein](http://purl.obolibrary.org/obo/UBERON_0003713) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### stem cell division `http://purl.obolibrary.org/obo/GO_0017145` -#### Removed -- [stem cell division](http://purl.obolibrary.org/obo/GO_0017145) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034)) - -- [stem cell division](http://purl.obolibrary.org/obo/GO_0017145) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034) - -#### Added -- [stem cell division](http://purl.obolibrary.org/obo/GO_0017145) EquivalentTo [cell division](http://purl.obolibrary.org/obo/GO_0051301) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034)) - -- [stem cell division](http://purl.obolibrary.org/obo/GO_0017145) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [stem cell](http://purl.obolibrary.org/obo/CL_0000034) - - -### stem cell factor receptor binding `http://purl.obolibrary.org/obo/GO_0005173` -#### Removed -- [stem cell factor receptor binding](http://purl.obolibrary.org/obo/GO_0005173) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [mast/stem cell growth factor receptor](http://purl.obolibrary.org/obo/PR_000002065)) - -- [stem cell factor receptor binding](http://purl.obolibrary.org/obo/GO_0005173) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [mast/stem cell growth factor receptor](http://purl.obolibrary.org/obo/PR_000002065) - -#### Added -- [stem cell factor receptor binding](http://purl.obolibrary.org/obo/GO_0005173) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mast/stem cell growth factor receptor](http://purl.obolibrary.org/obo/PR_000002065)) - -- [stem cell factor receptor binding](http://purl.obolibrary.org/obo/GO_0005173) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [mast/stem cell growth factor receptor](http://purl.obolibrary.org/obo/PR_000002065) - - -### sternoclavicular joint `http://purl.obolibrary.org/obo/UBERON_0001469` -#### Removed -- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray325.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray325.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sternum `http://purl.obolibrary.org/obo/UBERON_0000975` -#### Removed -- [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### steroid binding `http://purl.obolibrary.org/obo/GO_0005496` -#### Removed -- [steroid binding](http://purl.obolibrary.org/obo/GO_0005496) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35341](http://purl.obolibrary.org/obo/CHEBI_35341)) - -- [steroid binding](http://purl.obolibrary.org/obo/GO_0005496) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_35341](http://purl.obolibrary.org/obo/CHEBI_35341) - -#### Added -- [steroid binding](http://purl.obolibrary.org/obo/GO_0005496) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35341](http://purl.obolibrary.org/obo/CHEBI_35341)) - -- [steroid binding](http://purl.obolibrary.org/obo/GO_0005496) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_35341](http://purl.obolibrary.org/obo/CHEBI_35341) - - -### steroid hormone binding `http://purl.obolibrary.org/obo/GO_1990239` -#### Removed -- [steroid hormone binding](http://purl.obolibrary.org/obo/GO_1990239) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [steroid hormone binding](http://purl.obolibrary.org/obo/GO_1990239) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - -#### Added -- [steroid hormone binding](http://purl.obolibrary.org/obo/GO_1990239) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [steroid hormone binding](http://purl.obolibrary.org/obo/GO_1990239) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - - -### steroid hormone biosynthetic process `http://purl.obolibrary.org/obo/GO_0120178` -#### Removed -- [steroid hormone biosynthetic process](http://purl.obolibrary.org/obo/GO_0120178) EquivalentTo [steroid biosynthetic process](http://purl.obolibrary.org/obo/GO_0006694) and ([has output](http://purl.obolibrary.org/obo/RO_0002234) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [steroid hormone biosynthetic process](http://purl.obolibrary.org/obo/GO_0120178) SubClassOf [has output](http://purl.obolibrary.org/obo/RO_0002234) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - -#### Added -- [steroid hormone biosynthetic process](http://purl.obolibrary.org/obo/GO_0120178) EquivalentTo [steroid biosynthetic process](http://purl.obolibrary.org/obo/GO_0006694) and ([has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764)) - -- [steroid hormone biosynthetic process](http://purl.obolibrary.org/obo/GO_0120178) SubClassOf [has primary output](http://purl.obolibrary.org/obo/RO_0004008) some [CHEBI_26764](http://purl.obolibrary.org/obo/CHEBI_26764) - - -### stomach `http://purl.obolibrary.org/obo/UBERON_0000945` -#### Removed -- [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### stomodeum `http://purl.obolibrary.org/obo/UBERON_0000930` -#### Removed -- [stomodeum](http://purl.obolibrary.org/obo/UBERON_0000930) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [stomodeum](http://purl.obolibrary.org/obo/UBERON_0000930) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### strand of hair `http://purl.obolibrary.org/obo/UBERON_0001037` -#### Removed -- [strand of hair](http://purl.obolibrary.org/obo/UBERON_0001037) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/25/Gray945.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [strand of hair](http://purl.obolibrary.org/obo/UBERON_0001037) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/25/Gray945.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### stratum corneum of epidermis `http://purl.obolibrary.org/obo/UBERON_0002027` -#### Removed -- [stratum corneum of epidermis](http://purl.obolibrary.org/obo/UBERON_0002027) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/20/Skinlayers.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [stratum corneum of epidermis](http://purl.obolibrary.org/obo/UBERON_0002027) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/e4/Epidermal_layers.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [stratum corneum of epidermis](http://purl.obolibrary.org/obo/UBERON_0002027) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/e4/Epidermal_layers.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [stratum corneum of epidermis](http://purl.obolibrary.org/obo/UBERON_0002027) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/20/Skinlayers.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### stria vascularis of cochlear duct `http://purl.obolibrary.org/obo/UBERON_0002282` -#### Removed -- [stria vascularis of cochlear duct](http://purl.obolibrary.org/obo/UBERON_0002282) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [stria vascularis of cochlear duct](http://purl.obolibrary.org/obo/UBERON_0002282) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### striated muscle hypertrophy `http://purl.obolibrary.org/obo/GO_0014897` -#### Removed -- [striated muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014897) EquivalentTo [muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014896) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [striated muscle tissue](http://purl.obolibrary.org/obo/UBERON_0002036)) - -- [striated muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014897) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [striated muscle tissue](http://purl.obolibrary.org/obo/UBERON_0002036) - -#### Added -- [striated muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014897) EquivalentTo [muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014896) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [striated muscle tissue](http://purl.obolibrary.org/obo/UBERON_0002036)) - -- [striated muscle hypertrophy](http://purl.obolibrary.org/obo/GO_0014897) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [striated muscle tissue](http://purl.obolibrary.org/obo/UBERON_0002036) - - -### striatum `http://purl.obolibrary.org/obo/UBERON_0002435` -#### Removed -- [striatum](http://purl.obolibrary.org/obo/UBERON_0002435) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [striatum](http://purl.obolibrary.org/obo/UBERON_0002435) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### stromal cell of thymus `http://purl.obolibrary.org/obo/CL_4030001` -#### Removed -- [stromal cell of thymus](http://purl.obolibrary.org/obo/CL_4030001) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### subarachnoid space `http://purl.obolibrary.org/obo/UBERON_0000315` -#### Removed -- [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray769.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray769.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subcapsular sinus of lymph node `http://purl.obolibrary.org/obo/UBERON_0005463` -#### Removed -- [subcapsular sinus of lymph node](http://purl.obolibrary.org/obo/UBERON_0005463) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray597.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [subcapsular sinus of lymph node](http://purl.obolibrary.org/obo/UBERON_0005463) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray597.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subclavian artery `http://purl.obolibrary.org/obo/UBERON_0001533` -#### Removed -- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - -#### Added -- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PA" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - -- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subclavian vein `http://purl.obolibrary.org/obo/UBERON_0001587` -#### Removed -- [subclavian vein](http://purl.obolibrary.org/obo/UBERON_0001587) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [subclavian vein](http://purl.obolibrary.org/obo/UBERON_0001587) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subcommissural organ `http://purl.obolibrary.org/obo/UBERON_0002139` -#### Removed -- [subcommissural organ](http://purl.obolibrary.org/obo/UBERON_0002139) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [subcommissural organ](http://purl.obolibrary.org/obo/UBERON_0002139) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subcutaneous fat cell `http://purl.obolibrary.org/obo/CL_0002521` -#### Removed -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "subcutaneous adipocyte" - -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [label](http://www.w3.org/2000/01/rdf-schema#label) "subcutaneous fat cell" - -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A fat cell that is part of subcutaneous adipose tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -#### Added -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [label](http://www.w3.org/2000/01/rdf-schema#label) "subcutaneous adipocyte" - -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte that is part of subcutaneous adipose tissue." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - -- [subcutaneous fat cell](http://purl.obolibrary.org/obo/CL_0002521) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "subcutaneous fat cell" - - -### subdivision of digestive tract `http://purl.obolibrary.org/obo/UBERON_0004921` - -#### Added -- [subdivision of digestive tract](http://purl.obolibrary.org/obo/UBERON_0004921) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [subdivision of digestive tract](http://purl.obolibrary.org/obo/UBERON_0004921) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### submucosa `http://purl.obolibrary.org/obo/UBERON_0000009` -#### Removed -- [submucosa](http://purl.obolibrary.org/obo/UBERON_0000009) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [submucosa](http://purl.obolibrary.org/obo/UBERON_0000009) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [submucosa](http://purl.obolibrary.org/obo/UBERON_0000009) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/en/thumb/4/4e/Ens.png/200px-Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [submucosa](http://purl.obolibrary.org/obo/UBERON_0000009) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/4e/Ens.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### submucosal esophageal gland `http://purl.obolibrary.org/obo/UBERON_0008989` -#### Removed -- [submucosal esophageal gland](http://purl.obolibrary.org/obo/UBERON_0008989) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [submucosal esophageal gland](http://purl.obolibrary.org/obo/UBERON_0008989) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e8/Illu_esophageal_layers.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### subscapular artery `http://purl.obolibrary.org/obo/UBERON_0001397` -#### Removed -- [subscapular artery](http://purl.obolibrary.org/obo/UBERON_0001397) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4c/Axillary_branches.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [subscapular artery](http://purl.obolibrary.org/obo/UBERON_0001397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4c/Axillary_branches.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### substantia nigra `http://purl.obolibrary.org/obo/UBERON_0002038` -#### Removed -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb" - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Midbraincrosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SN" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:789" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb" - -#### Added -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "SN" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:789" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [substantia nigra](http://purl.obolibrary.org/obo/UBERON_0002038) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Midbraincrosssection.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### substantia propria of cornea `http://purl.obolibrary.org/obo/UBERON_0001777` -#### Removed -- [substantia propria of cornea](http://purl.obolibrary.org/obo/UBERON_0001777) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [substantia propria of cornea](http://purl.obolibrary.org/obo/UBERON_0001777) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sulcus of brain `http://purl.obolibrary.org/obo/UBERON_0013118` -#### Removed -- [sulcus of brain](http://purl.obolibrary.org/obo/UBERON_0013118) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "sulci & spaces" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9352" - -- [sulcus of brain](http://purl.obolibrary.org/obo/UBERON_0013118) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cerebral sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:10610" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [sulcus of brain](http://purl.obolibrary.org/obo/UBERON_0013118) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "sulci & spaces" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9352" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [sulcus of brain](http://purl.obolibrary.org/obo/UBERON_0013118) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "cerebral sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:10610" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### sulcus of parietal lobe `http://purl.obolibrary.org/obo/UBERON_0035927` -#### Removed -- [sulcus of parietal lobe](http://purl.obolibrary.org/obo/UBERON_0035927) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "parietal lobe sulci" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9370" - -- [sulcus of parietal lobe](http://purl.obolibrary.org/obo/UBERON_0035927) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PLs" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9370" - -#### Added -- [sulcus of parietal lobe](http://purl.obolibrary.org/obo/UBERON_0035927) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "parietal lobe sulci" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9370" - -- [sulcus of parietal lobe](http://purl.obolibrary.org/obo/UBERON_0035927) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "PLs" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:9370" - - -### superior mesenteric artery `http://purl.obolibrary.org/obo/UBERON_0001182` -#### Removed -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Superior_mesenteric_a.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray1099.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c0/Superior_mesenteric_a.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray1099.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### superior mesenteric vein `http://purl.obolibrary.org/obo/UBERON_0001138` -#### Removed -- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### superior olivary complex `http://purl.obolibrary.org/obo/UBERON_0002128` -#### Removed -- [superior olivary complex](http://purl.obolibrary.org/obo/UBERON_0002128) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [superior olivary complex](http://purl.obolibrary.org/obo/UBERON_0002128) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### superior ophthalmic vein `http://purl.obolibrary.org/obo/UBERON_0011192` -#### Removed -- [superior ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011192) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [superior ophthalmic vein](http://purl.obolibrary.org/obo/UBERON_0011192) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray572.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### superior salivatory nucleus `http://purl.obolibrary.org/obo/UBERON_0002149` -#### Removed -- [superior salivatory nucleus](http://purl.obolibrary.org/obo/UBERON_0002149) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [superior salivatory nucleus](http://purl.obolibrary.org/obo/UBERON_0002149) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### superior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001312` -#### Removed -- [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/0/02/Internal_iliac_branches.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/0/02/Internal_iliac_branches.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### suprarenal vein `http://purl.obolibrary.org/obo/UBERON_0001146` -#### Removed -- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### surface structure `http://purl.obolibrary.org/obo/UBERON_0003102` -#### Removed -- [surface structure](http://purl.obolibrary.org/obo/UBERON_0003102) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "surface structures" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000292" - -#### Added -- [surface structure](http://purl.obolibrary.org/obo/UBERON_0003102) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "surface structures" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000292" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### sweat gland `http://purl.obolibrary.org/obo/UBERON_0001820` -#### Removed -- [sweat gland](http://purl.obolibrary.org/obo/UBERON_0001820) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sweat gland](http://purl.obolibrary.org/obo/UBERON_0001820) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sympathetic ganglion `http://purl.obolibrary.org/obo/UBERON_0001806` -#### Removed -- [sympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001806) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001806) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sympathetic nervous system `http://purl.obolibrary.org/obo/UBERON_0000013` -#### Removed -- [sympathetic nervous system](http://purl.obolibrary.org/obo/UBERON_0000013) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sympathetic nervous system](http://purl.obolibrary.org/obo/UBERON_0000013) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### sympathetic trunk `http://purl.obolibrary.org/obo/UBERON_0000407` -#### Removed -- [sympathetic trunk](http://purl.obolibrary.org/obo/UBERON_0000407) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [sympathetic trunk](http://purl.obolibrary.org/obo/UBERON_0000407) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### symphysis `http://purl.obolibrary.org/obo/UBERON_0002216` -#### Removed -- [symphysis](http://purl.obolibrary.org/obo/UBERON_0002216) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray298.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [symphysis](http://purl.obolibrary.org/obo/UBERON_0002216) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray298.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### synchondrosis `http://purl.obolibrary.org/obo/UBERON_0002215` -#### Removed -- [synchondrosis](http://purl.obolibrary.org/obo/UBERON_0002215) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray297.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [synchondrosis](http://purl.obolibrary.org/obo/UBERON_0002215) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/76/Gray297.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### syncytiotrophoblast `http://purl.obolibrary.org/obo/UBERON_0000371` -#### Removed -- [syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0000371) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0000371) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### synovial cavity of joint `http://purl.obolibrary.org/obo/UBERON_0007617` -#### Removed -- [synovial cavity of joint](http://purl.obolibrary.org/obo/UBERON_0007617) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [synovial cavity of joint](http://purl.obolibrary.org/obo/UBERON_0007617) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - - -### synovial joint `http://purl.obolibrary.org/obo/UBERON_0002217` -#### Removed -- [synovial joint](http://purl.obolibrary.org/obo/UBERON_0002217) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "diarthrodial joints" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005153" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [synovial joint](http://purl.obolibrary.org/obo/UBERON_0002217) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "diarthroses" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005153" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [synovial joint](http://purl.obolibrary.org/obo/UBERON_0002217) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "diarthrodial joints" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005153" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [synovial joint](http://purl.obolibrary.org/obo/UBERON_0002217) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "diarthroses" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0005153" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### synovial membrane of synovial joint `http://purl.obolibrary.org/obo/UBERON_0002018` -#### Removed -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [synovial membrane of synovial joint](http://purl.obolibrary.org/obo/UBERON_0002018) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tarsal bone `http://purl.obolibrary.org/obo/UBERON_0001447` -#### Removed -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ossa tarsi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ossa tarsalia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -#### Added -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ossa tarsalia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - -- [tarsal bone](http://purl.obolibrary.org/obo/UBERON_0001447) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ossa tarsi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:71339" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA" - - -### tarsal region `http://purl.obolibrary.org/obo/UBERON_0004454` -#### Removed -- [tarsal region](http://purl.obolibrary.org/obo/UBERON_0004454) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tarsal region](http://purl.obolibrary.org/obo/UBERON_0004454) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tarsometatarsal joint `http://purl.obolibrary.org/obo/UBERON_0011118` -#### Removed -- [tarsometatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011118) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray355.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tarsometatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011118) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tarsometatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011118) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tarsometatarsal joint](http://purl.obolibrary.org/obo/UBERON_0011118) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray355.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### taste bud `http://purl.obolibrary.org/obo/UBERON_0001727` -#### Removed -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "taste buds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5a/Gray1018.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "caliculus gustatorius" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "tastebuds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5a/Gray1018.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "taste buds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "tastebuds" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "caliculus gustatorius" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Taste_bud" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### telencephalic ventricle `http://purl.obolibrary.org/obo/UBERON_0002285` -#### Removed -- [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral ventricles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lateral ventricles" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### temporal bone `http://purl.obolibrary.org/obo/UBERON_0001678` -#### Removed -- [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### temporal lobe `http://purl.obolibrary.org/obo/UBERON_0001871` -#### Removed -- [temporal lobe](http://purl.obolibrary.org/obo/UBERON_0001871) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray730.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [temporal lobe](http://purl.obolibrary.org/obo/UBERON_0001871) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray730.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### temporal sulcus `http://purl.obolibrary.org/obo/UBERON_0014687` -#### Removed -- [temporal sulcus](http://purl.obolibrary.org/obo/UBERON_0014687) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "temporal lobe sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:TLs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [temporal sulcus](http://purl.obolibrary.org/obo/UBERON_0014687) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "temporal lobe sulci" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HBA:TLs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### tendon `http://purl.obolibrary.org/obo/UBERON_0000043` -#### Removed -- [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### terminal bronchiole `http://purl.obolibrary.org/obo/UBERON_0002187` -#### Removed -- [terminal bronchiole](http://purl.obolibrary.org/obo/UBERON_0002187) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [terminal bronchiole](http://purl.obolibrary.org/obo/UBERON_0002187) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tertiary ovarian follicle `http://purl.obolibrary.org/obo/UBERON_0000037` -#### Removed -- [tertiary ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0000037) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tertiary ovarian follicle](http://purl.obolibrary.org/obo/UBERON_0000037) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### testicular artery `http://purl.obolibrary.org/obo/UBERON_0001187` -#### Removed -- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### testicular vein `http://purl.obolibrary.org/obo/UBERON_0001144` -#### Removed -- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Gray590.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Gray590.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### testis `http://purl.obolibrary.org/obo/UBERON_0000473` -#### Removed -- [testis](http://purl.obolibrary.org/obo/UBERON_0000473) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Gray1144.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [testis](http://purl.obolibrary.org/obo/UBERON_0000473) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "testes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [testis](http://purl.obolibrary.org/obo/UBERON_0000473) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Gray1144.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [testis](http://purl.obolibrary.org/obo/UBERON_0000473) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "testes" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### tetrapod frontal bone `http://purl.obolibrary.org/obo/UBERON_0000209` -#### Removed -- [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### theca cell `http://purl.obolibrary.org/obo/CL_0000503` -#### Removed -- [theca cell](http://purl.obolibrary.org/obo/CL_0000503) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:18690" - - - -### theca cell layer `http://purl.obolibrary.org/obo/UBERON_0000155` -#### Removed -- [theca cell layer](http://purl.obolibrary.org/obo/UBERON_0000155) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thecal cell layers" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001113" - -#### Added -- [theca cell layer](http://purl.obolibrary.org/obo/UBERON_0000155) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thecal cell layers" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001113" - - -### thick ascending limb of loop of Henle `http://purl.obolibrary.org/obo/UBERON_0001291` -#### Removed -- [thick ascending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001291) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thick ascending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001291) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracic aorta `http://purl.obolibrary.org/obo/UBERON_0001515` -#### Removed -- [thoracic aorta](http://purl.obolibrary.org/obo/UBERON_0001515) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic aorta](http://purl.obolibrary.org/obo/UBERON_0001515) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracic cavity `http://purl.obolibrary.org/obo/UBERON_0002224` -#### Removed -- [thoracic cavity](http://purl.obolibrary.org/obo/UBERON_0002224) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray846.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thoracic cavity](http://purl.obolibrary.org/obo/UBERON_0002224) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic cavity](http://purl.obolibrary.org/obo/UBERON_0002224) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray846.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thoracic cavity](http://purl.obolibrary.org/obo/UBERON_0002224) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Scheme_body_cavities-en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracic dorsal root ganglion `http://purl.obolibrary.org/obo/UBERON_0002835` - -#### Added -- [thoracic dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0002835) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [thoracic dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0002835) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### thoracic ganglion `http://purl.obolibrary.org/obo/UBERON_0000961` -#### Removed -- [thoracic ganglion](http://purl.obolibrary.org/obo/UBERON_0000961) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray849.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic ganglion](http://purl.obolibrary.org/obo/UBERON_0000961) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray849.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thoracic ganglion](http://purl.obolibrary.org/obo/UBERON_0000961) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [thoracic ganglion](http://purl.obolibrary.org/obo/UBERON_0000961) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### thoracic rib cage `http://purl.obolibrary.org/obo/UBERON_0003252` -#### Removed -- [thoracic rib cage](http://purl.obolibrary.org/obo/UBERON_0003252) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/88/Gray112.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic rib cage](http://purl.obolibrary.org/obo/UBERON_0003252) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/88/Gray112.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracic spinal cord `http://purl.obolibrary.org/obo/UBERON_0003038` -#### Removed -- [thoracic spinal cord](http://purl.obolibrary.org/obo/UBERON_0003038) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray820.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic spinal cord](http://purl.obolibrary.org/obo/UBERON_0003038) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/68/Gray820.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_0002347` -#### Removed -- [thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_0002347) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray90.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_0002347) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray90.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thoracodorsal artery `http://purl.obolibrary.org/obo/UBERON_0002011` -#### Removed -- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thymic artery `http://purl.obolibrary.org/obo/UBERON_0018243` -#### Removed -- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thymic arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thymic_branches_of_internal_thoracic_artery" - -#### Added -- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thymic arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thymic_branches_of_internal_thoracic_artery" - - -### thymic nurse cell `http://purl.obolibrary.org/obo/CL_4030004` -#### Removed -- [thymic nurse cell](http://purl.obolibrary.org/obo/CL_4030004) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### thymus `http://purl.obolibrary.org/obo/UBERON_0002370` -#### Removed -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb" - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Thymus.glb" - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb" - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cf/Illu_thymus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cf/Illu_thymus.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Thymus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thymus trabecula `http://purl.obolibrary.org/obo/UBERON_0004791` -#### Removed -- [thymus trabecula](http://purl.obolibrary.org/obo/UBERON_0004791) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "thymus trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [thymus trabecula](http://purl.obolibrary.org/obo/UBERON_0004791) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "thymus trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### thyroid gland `http://purl.obolibrary.org/obo/UBERON_0002046` -#### Removed -- [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Illu_thyroid_parathyroid.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a3/Illu_thyroid_parathyroid.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### thyroid primordium `http://purl.obolibrary.org/obo/UBERON_0003091` -#### Removed -- [thyroid primordium](http://purl.obolibrary.org/obo/UBERON_0003091) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thyroid primordia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001081" - -#### Added -- [thyroid primordium](http://purl.obolibrary.org/obo/UBERON_0003091) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "thyroid primordia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001081" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### tibia `http://purl.obolibrary.org/obo/UBERON_0000979` -#### Removed -- [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray260.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray260.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tibial nerve `http://purl.obolibrary.org/obo/UBERON_0001323` -#### Removed -- [tibial nerve](http://purl.obolibrary.org/obo/UBERON_0001323) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1a/Gray828.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tibial nerve](http://purl.obolibrary.org/obo/UBERON_0001323) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1a/Gray828.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tip of renal papilla `http://purl.obolibrary.org/obo/UBERON_0009095` -#### Removed -- [tip of renal papilla](http://purl.obolibrary.org/obo/UBERON_0009095) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "papillary tips" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "KUPO:0001009" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [tip of renal papilla](http://purl.obolibrary.org/obo/UBERON_0009095) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "papillary tips" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "KUPO:0001009" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### title `http://purl.org/dc/terms/title` - -#### Added -- AnnotationProperty: [title](http://purl.org/dc/terms/title) - - -### tongue `http://purl.obolibrary.org/obo/UBERON_0001723` -#### Removed -- [tongue](http://purl.obolibrary.org/obo/UBERON_0001723) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a6/Tongue.agr.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tongue](http://purl.obolibrary.org/obo/UBERON_0001723) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a6/Tongue.agr.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tongue muscle `http://purl.obolibrary.org/obo/UBERON_0000378` -#### Removed -- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray1019.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray1019.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tonsil `http://purl.obolibrary.org/obo/UBERON_0002372` - -#### Added -- [tonsil](http://purl.obolibrary.org/obo/UBERON_0002372) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [tonsil](http://purl.obolibrary.org/obo/UBERON_0002372) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### tonsil capsule `http://purl.obolibrary.org/obo/UBERON_0005207` - -#### Added -- [tonsil capsule](http://purl.obolibrary.org/obo/UBERON_0005207) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [tonsil capsule](http://purl.obolibrary.org/obo/UBERON_0005207) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### tonsil epithelium `http://purl.obolibrary.org/obo/UBERON_0013696` - -#### Added -- [tonsil epithelium](http://purl.obolibrary.org/obo/UBERON_0013696) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [tonsil epithelium](http://purl.obolibrary.org/obo/UBERON_0013696) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### tonsil germinal center `http://purl.obolibrary.org/obo/UBERON_0013688` - -#### Added -- [tonsil germinal center](http://purl.obolibrary.org/obo/UBERON_0013688) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [tonsil germinal center](http://purl.obolibrary.org/obo/UBERON_0013688) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### tooth root `http://purl.obolibrary.org/obo/UBERON_0003677` - -#### Added -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:37975" - - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA:th" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:55624" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [label](http://www.w3.org/2000/01/rdf-schema#label) "tooth root" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tooth root" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:55624" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "The part of a tooth that is implanted in the gum; the root is normally located below the neck of the tooth, covered by cementum rather than enamel, and attached by the periodontal ligament to the alveolar bone." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0011165" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GAID:1280" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "root of tooth" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:55624" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "radix corona" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:55624" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:0003677" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014092" - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [pheno_slim](http://purl.obolibrary.org/obo/uberon/core#pheno_slim) - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "SCTID:245728004" - -- Class: [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) SubClassOf [organ subunit](http://purl.obolibrary.org/obo/UBERON_0000063) - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) SubClassOf [attached to](http://purl.obolibrary.org/obo/RO_0002371) some [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) - -- [tooth root](http://purl.obolibrary.org/obo/UBERON_0003677) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [calcareous tooth](http://purl.obolibrary.org/obo/UBERON_0001091) - - -### tooth row `http://purl.obolibrary.org/obo/UBERON_0009678` -#### Removed -- [tooth row](http://purl.obolibrary.org/obo/UBERON_0009678) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tooth rows" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001642" - -#### Added -- [tooth row](http://purl.obolibrary.org/obo/UBERON_0009678) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tooth rows" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001642" - - -### torso binding `http://purl.obolibrary.org/obo/GO_0005122` -#### Removed -- [torso binding](http://purl.obolibrary.org/obo/GO_0005122) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [nuclear receptor ROR-gamma](http://purl.obolibrary.org/obo/PR_000001902)) - -- [torso binding](http://purl.obolibrary.org/obo/GO_0005122) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [nuclear receptor ROR-gamma](http://purl.obolibrary.org/obo/PR_000001902) - -#### Added -- [torso binding](http://purl.obolibrary.org/obo/GO_0005122) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [nuclear receptor ROR-gamma](http://purl.obolibrary.org/obo/PR_000001902)) - -- [torso binding](http://purl.obolibrary.org/obo/GO_0005122) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [nuclear receptor ROR-gamma](http://purl.obolibrary.org/obo/PR_000001902) - - -### trabecula `http://purl.obolibrary.org/obo/UBERON_0000440` -#### Removed -- [trabecula](http://purl.obolibrary.org/obo/UBERON_0000440) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trabecula](http://purl.obolibrary.org/obo/UBERON_0000440) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trabecula carnea `http://purl.obolibrary.org/obo/UBERON_0002511` -#### Removed -- [trabecula carnea](http://purl.obolibrary.org/obo/UBERON_0002511) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trabeculae carneae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trabecula carnea](http://purl.obolibrary.org/obo/UBERON_0002511) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trabeculae carneae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trabecula of lymph node `http://purl.obolibrary.org/obo/UBERON_0002195` -#### Removed -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae of lymph node" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray598.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lymph node trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray598.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae of lymph node" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [trabecula of lymph node](http://purl.obolibrary.org/obo/UBERON_0002195) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "lymph node trabeculae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trabecula of spleen `http://purl.obolibrary.org/obo/UBERON_0001265` -#### Removed -- [trabecula of spleen](http://purl.obolibrary.org/obo/UBERON_0001265) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae of spleen" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trabecula of spleen](http://purl.obolibrary.org/obo/UBERON_0001265) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trabeculae of spleen" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trachea `http://purl.obolibrary.org/obo/UBERON_0003126` -#### Removed -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb" - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb" - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -#### Added -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trachea cartilage `http://purl.obolibrary.org/obo/UBERON_0003604` -#### Removed -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb" - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb" - -#### Added -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-trachea.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-trachea.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### transitional myocyte of atrioventricular bundle `http://purl.obolibrary.org/obo/CL_1000481` -#### Removed -- [transitional myocyte of atrioventricular bundle](http://purl.obolibrary.org/obo/CL_1000481) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:83885" - - - -### transmembrane transporter activity `http://purl.obolibrary.org/obo/GO_0022857` -#### Removed -- [transmembrane transporter activity](http://purl.obolibrary.org/obo/GO_0022857) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-434650" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "MATEs mediate extrusion of xenobiotics" - - - -### transporter activity `http://purl.obolibrary.org/obo/GO_0005215` - -#### Added -- [transporter activity](http://purl.obolibrary.org/obo/GO_0005215) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-168313" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "Virion-associated M2 protein mediated ion infusion" - -- [transporter activity](http://purl.obolibrary.org/obo/GO_0005215) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Reactome:R-HSA-178215" - - [label](http://www.w3.org/2000/01/rdf-schema#label) "SMAD7:SMURF1 complex is exported to the cytosol" - - -### transverse colon `http://purl.obolibrary.org/obo/UBERON_0001157` -#### Removed -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3b/Dickdarm-Schema.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### transverse process of vertebra `http://purl.obolibrary.org/obo/UBERON_0001077` -#### Removed -- [transverse process of vertebra](http://purl.obolibrary.org/obo/UBERON_0001077) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Processustransversusvertebrae.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [transverse process of vertebra](http://purl.obolibrary.org/obo/UBERON_0001077) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a1/Processustransversusvertebrae.PNG"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trapezius muscle `http://purl.obolibrary.org/obo/UBERON_0002380` -#### Removed -- [trapezius muscle](http://purl.obolibrary.org/obo/UBERON_0002380) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/60/Trapezius.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [trapezius muscle](http://purl.obolibrary.org/obo/UBERON_0002380) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/60/Trapezius.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trigeminal ganglion `http://purl.obolibrary.org/obo/UBERON_0001675` -#### Removed -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "Gasserian ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Trigeminal_ganglion" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trigeminal ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "Gasserian ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Trigeminal_ganglion" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trigeminal ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trigeminal nerve `http://purl.obolibrary.org/obo/UBERON_0001645` -#### Removed -- [trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0001645) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "5n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:869" - -- [trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0001645) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/99/Gray778_Trigeminal.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0001645) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/99/Gray778_Trigeminal.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0001645) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "5n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:869" - - -### trigeminal nerve muscle `http://purl.obolibrary.org/obo/UBERON_0018544` -#### Removed -- [trigeminal nerve muscle](http://purl.obolibrary.org/obo/UBERON_0018544) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "muscles innervated by the trigeminal nerve" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MFMO:0000072" - -#### Added -- [trigeminal nerve muscle](http://purl.obolibrary.org/obo/UBERON_0018544) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "muscles innervated by the trigeminal nerve" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MFMO:0000072" - - -### trigeminal nuclear complex `http://purl.obolibrary.org/obo/UBERON_0007641` -#### Removed -- [trigeminal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0007641) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [trigeminal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0007641) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trigeminal placode complex `http://purl.obolibrary.org/obo/UBERON_0003070` -#### Removed -- [trigeminal placode complex](http://purl.obolibrary.org/obo/UBERON_0003070) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trigeminal placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000162" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [trigeminal placode complex](http://purl.obolibrary.org/obo/UBERON_0003070) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "trigeminal placodes" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000162" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trigone of urinary bladder `http://purl.obolibrary.org/obo/UBERON_0001257` -#### Removed -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/5/57/Illu_bladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb" - -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb" - -#### Added -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/5/57/Illu_bladder.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trigone of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001257) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trophoblast `http://purl.obolibrary.org/obo/UBERON_0000088` -#### Removed -- [trophoblast](http://purl.obolibrary.org/obo/UBERON_0000088) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [trophoblast](http://purl.obolibrary.org/obo/UBERON_0000088) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [trophoblast](http://purl.obolibrary.org/obo/UBERON_0000088) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -#### Added -- [trophoblast](http://purl.obolibrary.org/obo/UBERON_0000088) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### true rib `http://purl.obolibrary.org/obo/UBERON_0002237` -#### Removed -- [true rib](http://purl.obolibrary.org/obo/UBERON_0002237) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "costae verae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:True_ribs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -- [true rib](http://purl.obolibrary.org/obo/UBERON_0002237) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [true rib](http://purl.obolibrary.org/obo/UBERON_0002237) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "costae verae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:True_ribs" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [true rib](http://purl.obolibrary.org/obo/UBERON_0002237) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### trunk ganglion `http://purl.obolibrary.org/obo/UBERON_0007134` -#### Removed -- [trunk ganglion](http://purl.obolibrary.org/obo/UBERON_0007134) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trunk ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001573" - -#### Added -- [trunk ganglion](http://purl.obolibrary.org/obo/UBERON_0007134) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "trunk ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001573" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### trunk neural crest `http://purl.obolibrary.org/obo/UBERON_0003083` -#### Removed -- [trunk neural crest](http://purl.obolibrary.org/obo/UBERON_0003083) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "TNC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000319" - -#### Added -- [trunk neural crest](http://purl.obolibrary.org/obo/UBERON_0003083) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "TNC" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0000319" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### tunica adventitia of blood vessel `http://purl.obolibrary.org/obo/UBERON_0005734` -#### Removed -- [tunica adventitia of blood vessel](http://purl.obolibrary.org/obo/UBERON_0005734) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tunica adventitia of blood vessel](http://purl.obolibrary.org/obo/UBERON_0005734) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tunica intima `http://purl.obolibrary.org/obo/UBERON_0002523` -#### Removed -- [tunica intima](http://purl.obolibrary.org/obo/UBERON_0002523) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tunica intima](http://purl.obolibrary.org/obo/UBERON_0002523) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tunica media `http://purl.obolibrary.org/obo/UBERON_0002522` -#### Removed -- [tunica media](http://purl.obolibrary.org/obo/UBERON_0002522) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tunica media](http://purl.obolibrary.org/obo/UBERON_0002522) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### tympanic cavity `http://purl.obolibrary.org/obo/UBERON_0004114` -#### Removed -- [tympanic cavity](http://purl.obolibrary.org/obo/UBERON_0004114) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [tympanic cavity](http://purl.obolibrary.org/obo/UBERON_0004114) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### umbilical artery `http://purl.obolibrary.org/obo/UBERON_0001310` -#### Removed -- [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" - -- [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### umbilical blood vessel `http://purl.obolibrary.org/obo/UBERON_0010260` -#### Removed -- [umbilical blood vessel](http://purl.obolibrary.org/obo/UBERON_0010260) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "umbilical cord blood vessels" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [umbilical blood vessel](http://purl.obolibrary.org/obo/UBERON_0010260) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "umbilical cord blood vessels" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### umbilical cord `http://purl.obolibrary.org/obo/UBERON_0002331` -#### Removed -- [umbilical cord](http://purl.obolibrary.org/obo/UBERON_0002331) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" - -- [umbilical cord](http://purl.obolibrary.org/obo/UBERON_0002331) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/f3/Umbilicalcord.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [umbilical cord](http://purl.obolibrary.org/obo/UBERON_0002331) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [umbilical cord](http://purl.obolibrary.org/obo/UBERON_0002331) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/f3/Umbilicalcord.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### umbilical vein `http://purl.obolibrary.org/obo/UBERON_0002066` -#### Removed -- [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb" - -- [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### undifferentiated genital tubercle `http://purl.obolibrary.org/obo/UBERON_0005876` -#### Removed -- [undifferentiated genital tubercle](http://purl.obolibrary.org/obo/UBERON_0005876) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d6/Gray1119.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [undifferentiated genital tubercle](http://purl.obolibrary.org/obo/UBERON_0005876) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d6/Gray1119.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### unilaminar epithelium `http://purl.obolibrary.org/obo/UBERON_0000490` -#### Removed -- [unilaminar epithelium](http://purl.obolibrary.org/obo/UBERON_0000490) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "unilaminar epithelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [unilaminar epithelium](http://purl.obolibrary.org/obo/UBERON_0000490) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "unilaminar epithelia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001495" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### upper jaw region `http://purl.obolibrary.org/obo/UBERON_0001709` -#### Removed -- [upper jaw region](http://purl.obolibrary.org/obo/UBERON_0001709) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [upper jaw region](http://purl.obolibrary.org/obo/UBERON_0001709) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### upper lip `http://purl.obolibrary.org/obo/UBERON_0001834` -#### Removed -- [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### upper respiratory tract `http://purl.obolibrary.org/obo/UBERON_0001557` -#### Removed -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [upper respiratory tract](http://purl.obolibrary.org/obo/UBERON_0001557) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### upper urinary tract `http://purl.obolibrary.org/obo/UBERON_0011143` - -#### Added -- [upper urinary tract](http://purl.obolibrary.org/obo/UBERON_0011143) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [upper urinary tract](http://purl.obolibrary.org/obo/UBERON_0011143) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### ureter `http://purl.obolibrary.org/obo/UBERON_0000056` -#### Removed -- [ureter](http://purl.obolibrary.org/obo/UBERON_0000056) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ureter](http://purl.obolibrary.org/obo/UBERON_0000056) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### urethra `http://purl.obolibrary.org/obo/UBERON_0000057` -#### Removed -- [urethra](http://purl.obolibrary.org/obo/UBERON_0000057) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [urethra](http://purl.obolibrary.org/obo/UBERON_0000057) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### urinary bladder `http://purl.obolibrary.org/obo/UBERON_0001255` -#### Removed -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb" - -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb" - -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### urinary bladder neck smooth muscle `http://purl.obolibrary.org/obo/UBERON_0004230` -#### Removed -- [urinary bladder neck smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004230) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb" - -- [urinary bladder neck smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004230) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb" - -#### Added -- [urinary bladder neck smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004230) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [urinary bladder neck smooth muscle](http://purl.obolibrary.org/obo/UBERON_0004230) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Urinary_Bladder.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### urogenital sinus mesenchyme `http://purl.obolibrary.org/obo/UBERON_0009845` -#### Removed -- [urogenital sinus mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009845) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "UGM" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:18977204" - -#### Added -- [urogenital sinus mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009845) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "UGM" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:18977204" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### urorectal septum `http://purl.obolibrary.org/obo/UBERON_0005760` -#### Removed -- [urorectal septum](http://purl.obolibrary.org/obo/UBERON_0005760) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray992.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [urorectal septum](http://purl.obolibrary.org/obo/UBERON_0005760) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray992.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### urothelium `http://purl.obolibrary.org/obo/UBERON_0000365` -#### Removed -- [urothelium](http://purl.obolibrary.org/obo/UBERON_0000365) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/9/91/Harnblase_Urothel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [urothelium](http://purl.obolibrary.org/obo/UBERON_0000365) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/9/91/Harnblase_Urothel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### uterine cervix `http://purl.obolibrary.org/obo/UBERON_0000002` -#### Removed -- [uterine cervix](http://purl.obolibrary.org/obo/UBERON_0000002) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb" - -#### Added -- [uterine cervix](http://purl.obolibrary.org/obo/UBERON_0000002) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### uterine tube infundibulum `http://purl.obolibrary.org/obo/UBERON_0003984` -#### Removed -- [uterine tube infundibulum](http://purl.obolibrary.org/obo/UBERON_0003984) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [uterine tube infundibulum](http://purl.obolibrary.org/obo/UBERON_0003984) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### uterus `http://purl.obolibrary.org/obo/UBERON_0000995` -#### Removed -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6a/Female_reproductive_system_lateral_nolabel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb" - -#### Added -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6a/Female_reproductive_system_lateral_nolabel.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### uvea `http://purl.obolibrary.org/obo/UBERON_0001768` -#### Removed -- [uvea](http://purl.obolibrary.org/obo/UBERON_0001768) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [uvea](http://purl.obolibrary.org/obo/UBERON_0001768) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vagal neural crest `http://purl.obolibrary.org/obo/UBERON_0005428` -#### Removed -- [vagal neural crest](http://purl.obolibrary.org/obo/UBERON_0005428) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "VNC" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004191" - -#### Added -- [vagal neural crest](http://purl.obolibrary.org/obo/UBERON_0005428) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "VNC" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004191" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - -### vagina `http://purl.obolibrary.org/obo/UBERON_0000996` -#### Removed -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Illu_repdt_female.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/a4/Vaginal_opening_-_english_description.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vaginae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1b/Illu_repdt_female.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/a4/Vaginal_opening_-_english_description.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vaginae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - -### vaginal fluid `http://purl.obolibrary.org/obo/UBERON_0036243` - -#### Added -- [vaginal fluid](http://purl.obolibrary.org/obo/UBERON_0036243) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003084" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### vaginal vein `http://purl.obolibrary.org/obo/UBERON_0001319` -#### Removed -- [vaginal vein](http://purl.obolibrary.org/obo/UBERON_0001319) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vaginal vein](http://purl.obolibrary.org/obo/UBERON_0001319) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vaginal venous plexus `http://purl.obolibrary.org/obo/UBERON_0001472` -#### Removed -- [vaginal venous plexus](http://purl.obolibrary.org/obo/UBERON_0001472) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vaginal venous plexus](http://purl.obolibrary.org/obo/UBERON_0001472) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vagus X ganglion `http://purl.obolibrary.org/obo/UBERON_0005362` - -#### Added -- [vagus X ganglion](http://purl.obolibrary.org/obo/UBERON_0005362) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -- [vagus X ganglion](http://purl.obolibrary.org/obo/UBERON_0005362) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - -### vagus nerve `http://purl.obolibrary.org/obo/UBERON_0001759` -#### Removed -- [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "10n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:801" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - -- [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "10n" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:801" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - -### valve `http://purl.obolibrary.org/obo/UBERON_0003978` -#### Removed -- [valve](http://purl.obolibrary.org/obo/UBERON_0003978) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb" - -- [valve](http://purl.obolibrary.org/obo/UBERON_0003978) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb" - -#### Added -- [valve](http://purl.obolibrary.org/obo/UBERON_0003978) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [valve](http://purl.obolibrary.org/obo/UBERON_0003978) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### valve endothelial cell `http://purl.obolibrary.org/obo/CL_4030033` -#### Removed -- [valve endothelial cell](http://purl.obolibrary.org/obo/CL_4030033) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### valve interstitial cell `http://purl.obolibrary.org/obo/CL_4030032` -#### Removed -- [valve interstitial cell](http://purl.obolibrary.org/obo/CL_4030032) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1773-2692](https://orcid.org/0000-0002-1773-2692) - - - -### vas deferens `http://purl.obolibrary.org/obo/UBERON_0001000` -#### Removed -- [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vasa recta `http://purl.obolibrary.org/obo/UBERON_0004726` -#### Removed -- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vascular endothelial growth factor receptor 2 binding `http://purl.obolibrary.org/obo/GO_0043184` -#### Removed -- [vascular endothelial growth factor receptor 2 binding](http://purl.obolibrary.org/obo/GO_0043184) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [vascular endothelial growth factor receptor 2](http://purl.obolibrary.org/obo/PR_000002112)) - -- [vascular endothelial growth factor receptor 2 binding](http://purl.obolibrary.org/obo/GO_0043184) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [vascular endothelial growth factor receptor 2](http://purl.obolibrary.org/obo/PR_000002112) - -#### Added -- [vascular endothelial growth factor receptor 2 binding](http://purl.obolibrary.org/obo/GO_0043184) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [vascular endothelial growth factor receptor 2](http://purl.obolibrary.org/obo/PR_000002112)) - -- [vascular endothelial growth factor receptor 2 binding](http://purl.obolibrary.org/obo/GO_0043184) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [vascular endothelial growth factor receptor 2](http://purl.obolibrary.org/obo/PR_000002112) - - -### vascular endothelial growth factor receptor binding `http://purl.obolibrary.org/obo/GO_0005172` -#### Removed -- [vascular endothelial growth factor receptor binding](http://purl.obolibrary.org/obo/GO_0005172) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [vascular endothelial growth factor receptor](http://purl.obolibrary.org/obo/PR_000001971)) - -- [vascular endothelial growth factor receptor binding](http://purl.obolibrary.org/obo/GO_0005172) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [vascular endothelial growth factor receptor](http://purl.obolibrary.org/obo/PR_000001971) - -#### Added -- [vascular endothelial growth factor receptor binding](http://purl.obolibrary.org/obo/GO_0005172) EquivalentTo [binding](http://purl.obolibrary.org/obo/GO_0005488) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [vascular endothelial growth factor receptor](http://purl.obolibrary.org/obo/PR_000001971)) - -- [vascular endothelial growth factor receptor binding](http://purl.obolibrary.org/obo/GO_0005172) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [vascular endothelial growth factor receptor](http://purl.obolibrary.org/obo/PR_000001971) - - -### vascular system `http://purl.obolibrary.org/obo/UBERON_0007798` - -#### Added -- [vascular system](http://purl.obolibrary.org/obo/UBERON_0007798) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [vascular system](http://purl.obolibrary.org/obo/UBERON_0007798) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - - -### vasculature `http://purl.obolibrary.org/obo/UBERON_0002049` -#### Removed -- [vasculature](http://purl.obolibrary.org/obo/UBERON_0002049) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vasculature](http://purl.obolibrary.org/obo/UBERON_0002049) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vasculature of eye `http://purl.obolibrary.org/obo/UBERON_0002203` -#### Removed -- [vasculature of eye](http://purl.obolibrary.org/obo/UBERON_0002203) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [vasculature of eye](http://purl.obolibrary.org/obo/UBERON_0002203) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -#### Added -- [vasculature of eye](http://purl.obolibrary.org/obo/UBERON_0002203) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vasculature of eye](http://purl.obolibrary.org/obo/UBERON_0002203) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vasopressin receptor activity `http://purl.obolibrary.org/obo/GO_0005000` -#### Removed -- [vasopressin receptor activity](http://purl.obolibrary.org/obo/GO_0005000) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - -- [vasopressin receptor activity](http://purl.obolibrary.org/obo/GO_0005000) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937) - -#### Added -- [vasopressin receptor activity](http://purl.obolibrary.org/obo/GO_0005000) EquivalentTo [signaling receptor activity](http://purl.obolibrary.org/obo/GO_0038023) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937)) - -- [vasopressin receptor activity](http://purl.obolibrary.org/obo/GO_0005000) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [CHEBI_9937](http://purl.obolibrary.org/obo/CHEBI_9937) - - -### vein `http://purl.obolibrary.org/obo/UBERON_0001638` -#### Removed -- [vein](http://purl.obolibrary.org/obo/UBERON_0001638) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/c2/Venous_system_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vein](http://purl.obolibrary.org/obo/UBERON_0001638) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "venae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001743" - -#### Added -- [vein](http://purl.obolibrary.org/obo/UBERON_0001638) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/c2/Venous_system_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vein](http://purl.obolibrary.org/obo/UBERON_0001638) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "venae" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001743" - - -### vein of lower lip `http://purl.obolibrary.org/obo/UBERON_0003478` -#### Removed -- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vena cava `http://purl.obolibrary.org/obo/UBERON_0004087` -#### Removed -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/35/Relations_of_the_aorta,_trachea,_esophagus_and_other_heart_structures.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb" - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb" - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/7/7c/Heart_numlabels.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "venae cavae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Venae_cavae" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/35/Relations_of_the_aorta,_trachea,_esophagus_and_other_heart_structures.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "venae cavae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Venae_cavae" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/7/7c/Heart_numlabels.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### venous blood `http://purl.obolibrary.org/obo/UBERON_0013756` - -#### Added -- [venous blood](http://purl.obolibrary.org/obo/UBERON_0013756) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006187" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - - -### venous dural sinus `http://purl.obolibrary.org/obo/UBERON_0005486` -#### Removed -- [venous dural sinus](http://purl.obolibrary.org/obo/UBERON_0005486) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### pulmonary venule `http://purl.obolibrary.org/obo/UBERON_8600024` #### Added -- [venous dural sinus](http://purl.obolibrary.org/obo/UBERON_0005486) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [date](http://purl.org/dc/terms/date) "2023-10-24T11:26:27Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [label](http://www.w3.org/2000/01/rdf-schema#label) "pulmonary venule" -### venous plexus `http://purl.obolibrary.org/obo/UBERON_0001593` -#### Removed -- [venous plexus](http://purl.obolibrary.org/obo/UBERON_0001593) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [venous plexus](http://purl.obolibrary.org/obo/UBERON_0001593) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### venous system `http://purl.obolibrary.org/obo/UBERON_0004582` - -#### Added -- [venous system](http://purl.obolibrary.org/obo/UBERON_0004582) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [venous system](http://purl.obolibrary.org/obo/UBERON_0004582) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa." + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30247823" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:22283705" -### ventral cochlear nucleus `http://purl.obolibrary.org/obo/UBERON_0002828` -#### Removed -- [ventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002828) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "VCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2567" - -- [ventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002828) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [has_obo_namespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon" -#### Added -- [ventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002828) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bb/Gray760.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ventral cochlear nucleus](http://purl.obolibrary.org/obo/UBERON_0002828) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "VCo" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8600024" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:2567" +- Class: [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) EquivalentTo [venule](http://purl.obolibrary.org/obo/UBERON_0001979) and ([part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)) -### ventral funiculus of spinal cord `http://purl.obolibrary.org/obo/UBERON_0002180` -#### Removed -- [ventral funiculus of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002180) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ventral funiculi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000605" +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [thoracic vein](http://purl.obolibrary.org/obo/UBERON_0005194) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [drains](http://purl.obolibrary.org/obo/RO_0002179) some [pulmonary capillary](http://purl.obolibrary.org/obo/UBERON_0016405) -- [ventral funiculus of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002180) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary venous system](http://purl.obolibrary.org/obo/UBERON_0013127) -#### Added -- [ventral funiculus of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002180) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ventral funiculi" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000605" +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [connected to](http://purl.obolibrary.org/obo/RO_0002170) some [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [lung blood vessel](http://purl.obolibrary.org/obo/UBERON_0003512) -- [ventral funiculus of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002180) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [respiratory system venule](http://purl.obolibrary.org/obo/UBERON_0003494) -### ventral horn of spinal cord `http://purl.obolibrary.org/obo/UBERON_0002257` +### renal afferent arteriole `http://purl.obolibrary.org/obo/UBERON_0004639` #### Removed -- [ventral horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002257) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ventral horns spinal cord" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001288" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [interlobular artery](http://purl.obolibrary.org/obo/UBERON_0004723) #### Added -- [ventral horn of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002257) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "ventral horns spinal cord" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VHOG:0001288" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [interlobular artery](http://purl.obolibrary.org/obo/UBERON_0004723) -### ventral mesogastrium `http://purl.obolibrary.org/obo/UBERON_0005626` +### right eye `http://purl.obolibrary.org/obo/UBERON_0004549` #### Removed -- [ventral mesogastrium](http://purl.obolibrary.org/obo/UBERON_0005626) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ventral mesogastrium](http://purl.obolibrary.org/obo/UBERON_0005626) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - +- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### ventral pancreatic bud `http://purl.obolibrary.org/obo/UBERON_0003924` -#### Removed -- [ventral pancreatic bud](http://purl.obolibrary.org/obo/UBERON_0003924) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [right eye](http://purl.obolibrary.org/obo/UBERON_0004549) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [ventral pancreatic bud](http://purl.obolibrary.org/obo/UBERON_0003924) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### ventral pancreatic duct `http://purl.obolibrary.org/obo/UBERON_0001064` +### right lung `http://purl.obolibrary.org/obo/UBERON_0002167` #### Removed -- [ventral pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0001064) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [ventral pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0001064) [editor note](http://purl.obolibrary.org/obo/IAO_0000116) "in EHDAA2 this is an epithelium, in FMA the wall consists of epithelium and connective tissue" +- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [ventral pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0001064) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "EDITOR_NOTE in EHDAA2 this is an epithelium, in FMA the wall consists of epithelium and connective tissue" +- [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [ventral pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0001064) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### ventricular system of central nervous system `http://purl.obolibrary.org/obo/UBERON_0005281` +### segmental bronchus `http://purl.obolibrary.org/obo/UBERON_0002184` #### Removed -- [ventricular system of central nervous system](http://purl.obolibrary.org/obo/UBERON_0005281) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [ventricular system of central nervous system](http://purl.obolibrary.org/obo/UBERON_0005281) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - +- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### venule `http://purl.obolibrary.org/obo/UBERON_0001979` -#### Removed -- [venule](http://purl.obolibrary.org/obo/UBERON_0001979) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/da/Illu_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [segmental bronchus](http://purl.obolibrary.org/obo/UBERON_0002184) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [venule](http://purl.obolibrary.org/obo/UBERON_0001979) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/da/Illu_capillary.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### vermiform appendix `http://purl.obolibrary.org/obo/UBERON_0001154` +### skeletal muscle organ `http://purl.obolibrary.org/obo/UBERON_0014892` #### Removed -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb" - -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb" - -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skeletal muscle organ](http://purl.obolibrary.org/obo/UBERON_0014892) [label](http://www.w3.org/2000/01/rdf-schema#label) "skeletal muscle organ" #### Added -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray536.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skeletal muscle organ](http://purl.obolibrary.org/obo/UBERON_0014892) [label](http://www.w3.org/2000/01/rdf-schema#label) "skeletal muscle organ, vertebrate" -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skeletal muscle organ](http://purl.obolibrary.org/obo/UBERON_0014892) SubClassOf [only in taxon](http://purl.obolibrary.org/obo/RO_0002160) some [Vertebrata ](http://purl.obolibrary.org/obo/NCBITaxon_7742) -- [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -### vertebra `http://purl.obolibrary.org/obo/UBERON_0002412` +### skin bony tubercle `http://purl.obolibrary.org/obo/UBERON_0017163` #### Removed -- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006196" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" - -- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vertebrae" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PHENOSCAPE:ad" +- [skin bony tubercle](http://purl.obolibrary.org/obo/UBERON_0017163) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony tubercles" + - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "UBERONTEMP:3b77fb04-1e62-43af-a84b-5d5eb7388525" - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - -### vertebral canal `http://purl.obolibrary.org/obo/UBERON_0006692` -#### Removed -- [vertebral canal](http://purl.obolibrary.org/obo/UBERON_0006692) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vertebral canal](http://purl.obolibrary.org/obo/UBERON_0006692) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/3/30/Gray82.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vertebral foramen `http://purl.obolibrary.org/obo/UBERON_0001131` -#### Removed -- [vertebral foramen](http://purl.obolibrary.org/obo/UBERON_0001131) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/10/Foramenvertebrale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vertebral foramen](http://purl.obolibrary.org/obo/UBERON_0001131) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/10/Foramenvertebrale.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vesical artery `http://purl.obolibrary.org/obo/UBERON_0009027` -#### Removed -- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vesical arteries" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - #### Added -- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vesical arteries" +- [skin bony tubercle](http://purl.obolibrary.org/obo/UBERON_0017163) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "bony tubercles" - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -### vesical vein `http://purl.obolibrary.org/obo/UBERON_0002460` +### skin of body `http://purl.obolibrary.org/obo/UBERON_0002097` #### Removed -- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vesical veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - -#### Added -- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skin of body](http://purl.obolibrary.org/obo/UBERON_0002097) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Skin.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "vesical veins" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -### vestibulo-auditory system `http://purl.obolibrary.org/obo/UBERON_0002105` +### skin of lip `http://purl.obolibrary.org/obo/UBERON_0001458` #### Removed -- [vestibulo-auditory system](http://purl.obolibrary.org/obo/UBERON_0002105) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skin of lip](http://purl.obolibrary.org/obo/UBERON_0001458) SubClassOf [skin of head](http://purl.obolibrary.org/obo/UBERON_0001084) #### Added -- [vestibulo-auditory system](http://purl.obolibrary.org/obo/UBERON_0002105) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [skin of lip](http://purl.obolibrary.org/obo/UBERON_0001458) SubClassOf [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) -### vestibulocochlear ganglion `http://purl.obolibrary.org/obo/UBERON_0002827` +### skull `http://purl.obolibrary.org/obo/UBERON_0003129` #### Removed -- [vestibulocochlear ganglion](http://purl.obolibrary.org/obo/UBERON_0002827) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vestibulocochlear ganglia" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004142" - -#### Added -- [vestibulocochlear ganglion](http://purl.obolibrary.org/obo/UBERON_0002827) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vestibulocochlear ganglia" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004142" +- [skull](http://purl.obolibrary.org/obo/UBERON_0003129) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_7762](http://purl.obolibrary.org/obo/NCBITaxon_7762) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) -### vestibulocochlear nerve `http://purl.obolibrary.org/obo/UBERON_0001648` +### spleen trabecular artery `http://purl.obolibrary.org/obo/UBERON_0010399` #### Removed -- [vestibulocochlear nerve](http://purl.obolibrary.org/obo/UBERON_0001648) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vestibulocochlear nerve](http://purl.obolibrary.org/obo/UBERON_0001648) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "8n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [ABBREVIATION](http://purl.obolibrary.org/obo/uberon/core#ABBREVIATION) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" +- [spleen trabecular artery](http://purl.obolibrary.org/obo/UBERON_0010399) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:890" - -#### Added -- [vestibulocochlear nerve](http://purl.obolibrary.org/obo/UBERON_0001648) [has_broad_synonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "8n" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [abbreviation](http://purl.obolibrary.org/obo/OMO_0003000) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NIFSTD:NeuroNames_abbrevSource" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:890" - -- [vestibulocochlear nerve](http://purl.obolibrary.org/obo/UBERON_0001648) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### visceral peritoneum `http://purl.obolibrary.org/obo/UBERON_0001178` -#### Removed -- [visceral peritoneum](http://purl.obolibrary.org/obo/UBERON_0001178) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [spleen trabecular artery](http://purl.obolibrary.org/obo/UBERON_0010399) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MP" #### Added -- [visceral peritoneum](http://purl.obolibrary.org/obo/UBERON_0001178) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vitelline artery `http://purl.obolibrary.org/obo/UBERON_0006002` -#### Removed -- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [spleen trabecular artery](http://purl.obolibrary.org/obo/UBERON_0010399) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -#### Added -- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [spleen trabecular artery](http://purl.obolibrary.org/obo/UBERON_0010399) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MP" -### vitelline vein `http://purl.obolibrary.org/obo/UBERON_0005487` +### splenic artery `http://purl.obolibrary.org/obo/UBERON_0001194` #### Removed -- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray475.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) -- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vitelline veins" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004147" - - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) +- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray475.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "vitelline veins" - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "XAO:0004147" +- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [celiac artery](http://purl.obolibrary.org/obo/UBERON_0001640) -### vitreous body `http://purl.obolibrary.org/obo/UBERON_0001798` -#### Removed -- [vitreous body](http://purl.obolibrary.org/obo/UBERON_0001798) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### superior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001312` #### Added -- [vitreous body](http://purl.obolibrary.org/obo/UBERON_0001798) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) -### vitreous humor `http://purl.obolibrary.org/obo/UBERON_0001797` +### thymic artery `http://purl.obolibrary.org/obo/UBERON_0018243` #### Removed -- [vitreous humor](http://purl.obolibrary.org/obo/UBERON_0001797) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [vitreous humor](http://purl.obolibrary.org/obo/UBERON_0001797) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - -### vomer `http://purl.obolibrary.org/obo/UBERON_0002396` -#### Removed -- [vomer](http://purl.obolibrary.org/obo/UBERON_0002396) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [vomer](http://purl.obolibrary.org/obo/UBERON_0002396) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### vomeronasal organ `http://purl.obolibrary.org/obo/UBERON_0002255` -#### Removed -- [vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0002255) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray51.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -#### Added -- [vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0002255) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/84/Gray51.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) -### white fat cell `http://purl.obolibrary.org/obo/CL_0000448` +### tongue muscle `http://purl.obolibrary.org/obo/UBERON_0000378` #### Removed -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [label](http://www.w3.org/2000/01/rdf-schema#label) "white fat cell" - -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "Fat cells with light coloration and few mitochondria. They contain a scant ring of cytoplasm surrounding a single large lipid droplet or vacuole." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052438" - -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "white adipocyte" +- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) SubClassOf [craniocervical muscle](http://purl.obolibrary.org/obo/UBERON_0010959) #### Added -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [label](http://www.w3.org/2000/01/rdf-schema#label) "white adipocyte" - -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An adipocyte with light coloration and few mitochondria. It contains a scant ring of cytoplasm surrounding a single large lipid droplet or vacuole." - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:tfm" - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052438" +- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) SubClassOf [skeletal muscle organ](http://purl.obolibrary.org/obo/UBERON_0014892) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FEED:rd" -- [white fat cell](http://purl.obolibrary.org/obo/CL_0000448) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "white fat cell" - -### white matter `http://purl.obolibrary.org/obo/UBERON_0002316` +### trachea `http://purl.obolibrary.org/obo/UBERON_0003126` #### Removed -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "nlx_anat_101177 seems to have been lost in the transition from NIFGA to Neurolex" - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "NIF" - - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/SciCrunch/NIF-Ontology/issues/83" - -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Grey_matter_and_white_matter_-_very_high_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/d/d7/Grey_matter_and_white_matter_-_very_high_mag.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [UBPROP_0000012](http://purl.obolibrary.org/obo/UBPROP_0000012) "nlx_anat_101177 seems to have been lost in the transition from NIFGA to Neurolex" - - [external_ontology](http://www.geneontology.org/formats/oboInOwl#external_ontology) "NIF" - - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/SciCrunch/NIF-Ontology/issues/83" +- [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### white matter lamina of cerebellum `http://purl.obolibrary.org/obo/UBERON_0014540` +### trachea cartilage `http://purl.obolibrary.org/obo/UBERON_0003604` #### Removed -- [white matter lamina of cerebellum](http://purl.obolibrary.org/obo/UBERON_0014540) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "laminae albae of cerebellar cortex" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1105" - -- [white matter lamina of cerebellum](http://purl.obolibrary.org/obo/UBERON_0014540) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "white laminae of cerebellum" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [PLURAL](http://purl.obolibrary.org/obo/uberon/core#PLURAL) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1105" - -#### Added -- [white matter lamina of cerebellum](http://purl.obolibrary.org/obo/UBERON_0014540) [has exact synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "white laminae of cerebellum" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) - - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1105" +- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [white matter lamina of cerebellum](http://purl.obolibrary.org/obo/UBERON_0014540) [has_related_synonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "laminae albae of cerebellar cortex" - - [has_synonym_type](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [plural form](http://purl.obolibrary.org/obo/OMO_0003004) +- [trachea cartilage](http://purl.obolibrary.org/obo/UBERON_0003604) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BIRNLEX:1105" -### white pulp of spleen `http://purl.obolibrary.org/obo/UBERON_0001959` +### umbrella cell of urothelium `http://purl.obolibrary.org/obo/CL_4030056` #### Removed -- [white pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001959) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -#### Added -- [white pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001959) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1191.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - +- [umbrella cell of urothelium](http://purl.obolibrary.org/obo/CL_4030056) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### wrist joint `http://purl.obolibrary.org/obo/UBERON_0001491` -#### Removed -- [wrist joint](http://purl.obolibrary.org/obo/UBERON_0001491) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Human_wrist.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [umbrella cell of urothelium](http://purl.obolibrary.org/obo/CL_4030056) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -#### Added -- [wrist joint](http://purl.obolibrary.org/obo/UBERON_0001491) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://upload.wikimedia.org/wikipedia/commons/4/4a/Human_wrist.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -### yolk sac `http://purl.obolibrary.org/obo/UBERON_0001040` +### ureter smooth muscle cell `http://purl.obolibrary.org/obo/CL_1000979` #### Removed -- [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [ureter smooth muscle cell](http://purl.obolibrary.org/obo/CL_1000979) [in_subset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -- [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040) SubClassOf [extraembryonic membrane](http://purl.obolibrary.org/obo/UBERON_0005631) - - [seeAlso](http://www.geneontology.org/formats/oboInOwl#seeAlso) "https://github.com/obophenotype/uberon/issues/635" +- [ureter smooth muscle cell](http://purl.obolibrary.org/obo/CL_1000979) [present_in_taxon](http://purl.obolibrary.org/obo/RO_0002175) [Homo sapiens](http://purl.obolibrary.org/obo/NCBITaxon_9606) -#### Added -- [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040) SubClassOf [extraembryonic membrane](http://purl.obolibrary.org/obo/UBERON_0005631) - - [see also](http://www.w3.org/2000/01/rdf-schema#seeAlso) "https://github.com/obophenotype/uberon/issues/635" -### zona glomerulosa of adrenal gland `http://purl.obolibrary.org/obo/UBERON_0002053` +### ureteric segment of renal artery `http://purl.obolibrary.org/obo/UBERON_0003468` #### Removed -- [zona glomerulosa of adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002053) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [zona glomerulosa of adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002053) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" -### zona pellucida `http://purl.obolibrary.org/obo/UBERON_0000086` -#### Removed -- [zona pellucida](http://purl.obolibrary.org/obo/UBERON_0000086) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### vertebra `http://purl.obolibrary.org/obo/UBERON_0002412` #### Added -- [zona pellucida](http://purl.obolibrary.org/obo/UBERON_0000086) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral column](http://purl.obolibrary.org/obo/UBERON_0001130) -### zone of skin `http://purl.obolibrary.org/obo/UBERON_0000014` +### vertebral element `http://purl.obolibrary.org/obo/UBERON_0010913` #### Removed -- [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral element](http://purl.obolibrary.org/obo/UBERON_0010913) SubClassOf [part_of](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral column](http://purl.obolibrary.org/obo/UBERON_0001130) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO" -- [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/e/e8/HumanSkinDiagram.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -#### Added -- [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/e/e8/HumanSkinDiagram.jpg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -- [zone of skin](http://purl.obolibrary.org/obo/UBERON_0000014) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - -### zone of stomach `http://purl.obolibrary.org/obo/UBERON_0009870` +### vitelline artery `http://purl.obolibrary.org/obo/UBERON_0006002` #### Removed -- [zone of stomach](http://purl.obolibrary.org/obo/UBERON_0009870) [depicted_by](http://xmlns.com/foaf/0.1/depicted_by) "http://upload.wikimedia.org/wikipedia/commons/2/29/Regions_of_stomach.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [trunk blood vessel](http://purl.obolibrary.org/obo/UBERON_0003513) -#### Added -- [zone of stomach](http://purl.obolibrary.org/obo/UBERON_0009870) [depiction](http://xmlns.com/foaf/0.1/depiction) "http://upload.wikimedia.org/wikipedia/commons/2/29/Regions_of_stomach.svg"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - -### zygote asymmetric cell division `http://purl.obolibrary.org/obo/GO_0010070` -#### Removed -- [zygote asymmetric cell division](http://purl.obolibrary.org/obo/GO_0010070) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has input](http://purl.obolibrary.org/obo/RO_0002233) some [animal zygote](http://purl.obolibrary.org/obo/CL_0000365)) +- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [branching part of](http://purl.obolibrary.org/obo/RO_0002380) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "ventral branch" -- [zygote asymmetric cell division](http://purl.obolibrary.org/obo/GO_0010070) SubClassOf [has input](http://purl.obolibrary.org/obo/RO_0002233) some [animal zygote](http://purl.obolibrary.org/obo/CL_0000365) +- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) #### Added -- [zygote asymmetric cell division](http://purl.obolibrary.org/obo/GO_0010070) EquivalentTo [asymmetric cell division](http://purl.obolibrary.org/obo/GO_0008356) and ([has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [animal zygote](http://purl.obolibrary.org/obo/CL_0000365)) +- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [connecting branch of](http://purl.obolibrary.org/obo/RO_0002252) some [dorsal aorta](http://purl.obolibrary.org/obo/UBERON_0005805) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "ventral branch" -- [zygote asymmetric cell division](http://purl.obolibrary.org/obo/GO_0010070) SubClassOf [has primary input](http://purl.obolibrary.org/obo/RO_0004009) some [animal zygote](http://purl.obolibrary.org/obo/CL_0000365) - - -### zygote stage `http://purl.obolibrary.org/obo/UBERON_0000106` - -#### Added -- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000302" - - [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-4423-4370" +- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637) diff --git a/src/ontology/reports/cl-edit.owl-obo-report.tsv b/src/ontology/reports/cl-edit.owl-obo-report.tsv index 47106f83a..355548e8f 100644 --- a/src/ontology/reports/cl-edit.owl-obo-report.tsv +++ b/src/ontology/reports/cl-edit.owl-obo-report.tsv @@ -863,4 +863,5 @@ INFO missing_superclass CL:4033051 rdfs:subClassOf INFO missing_superclass CL:4033052 rdfs:subClassOf INFO missing_superclass CL:4033054 rdfs:subClassOf INFO missing_superclass CL:4033055 rdfs:subClassOf +INFO missing_superclass CL:4033061 rdfs:subClassOf INFO missing_superclass CL:4040004 rdfs:subClassOf diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.json b/src/ontology/subsets/blood_and_immune_upper_slim.json index aeaef2a56..a642004a5 100644 --- a/src/ontology/subsets/blood_and_immune_upper_slim.json +++ b/src/ontology/subsets/blood_and_immune_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/blood_and_immune_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/blood_and_immune_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -3231,6 +3231,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -3241,6 +3242,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -6190,28 +6195,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0003674", "lbl" : "molecular_function", @@ -7903,28 +7886,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -15299,11 +15260,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -15328,7 +15289,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -15480,7 +15441,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -15668,7 +15629,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -15713,7 +15674,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -15951,11 +15912,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -22861,6 +22822,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -26429,6 +26432,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -26473,102 +26479,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000055", "lbl" : "vessel", @@ -27443,26 +27353,6 @@ "val" : "https://github.com/obophenotype/uberon/issues/533" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", - 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In vertebrates this is the subdivision that includes the cervical vertebrae.", - "xrefs" : [ "https://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#pheno_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic part of animal", - "xrefs" : [ "Wikipedia:Head" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic region", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head and neck", - "xrefs" : [ "FMA:280881" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head or neck" - } ], - "xrefs" : [ { - "val" : "CALOHA:TS-2356" - }, { - "val" : "EV:0100009" - }, { - "val" : "FMA:280881" - }, { - "val" : "MA:0000006" - }, { - "val" : "NCIT:C12418" - }, { - "val" : "SCTID:361355005" - }, { - "val" : "UMLS:C0460004" - 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}, { - "sub" : "http://purl.obolibrary.org/obo/GO_0007585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0032501" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0007586", "pred" : "is_a", @@ -44412,18 +44087,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000025", "pred" : "http://purl.obolibrary.org/obo/RO_0000086", "obj" : "http://purl.obolibrary.org/obo/PATO_0002299" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011676" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007811" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000055", "pred" : "is_a", @@ -44716,26 +44379,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000111", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" - 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}, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004921" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006595", "pred" : "is_a", @@ -47268,32 +46875,6 @@ "val" : "MA" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0009142", "pred" : "is_a", @@ -47492,10 +47073,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -48240,6 +47817,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -49196,6 +48785,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -52313,13 +51906,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/BFO_0000051", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0004151" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.obo b/src/ontology/subsets/blood_and_immune_upper_slim.obo index e4d730919..dfabdc25d 100644 --- a/src/ontology/subsets/blood_and_immune_upper_slim.obo +++ b/src/ontology/subsets/blood_and_immune_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/blood_and_immune_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/blood_and_immune_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/blood_and_immune_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -2042,6 +2042,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -2051,6 +2052,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000842 @@ -3793,17 +3795,6 @@ subset: goslim_generic xref: Wikipedia:Circulatory_system is_a: GO:0003008 ! system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0003674 name: molecular_function @@ -4746,16 +4737,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -8512,8 +8493,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -8525,7 +8506,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -8594,7 +8575,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -8670,7 +8651,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -8687,7 +8668,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -8790,8 +8771,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -10647,6 +10628,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -10668,54 +10650,6 @@ relationship: has_quality PATO:0002299 ! tubular property_value: IAO:0000232 "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string property_value: UBPROP:0000007 "tubular" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000055 name: vessel @@ -11159,22 +11093,6 @@ relationship: simultaneous_with GO:0048513 ! animal organ development property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - -[Term] -id: UBERON:0000154 -name: posterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000165 name: mouth @@ -11233,8 +11151,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -11792,7 +11708,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -12238,69 +12154,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0002405 ! immune system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -12615,6 +12468,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -14907,25 +14761,6 @@ intersection_of: UBERON:0000463 ! organism substance intersection_of: has_quality PATO:0001548 ! quality of a liquid relationship: has_quality PATO:0001548 ! quality of a liquid -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -15296,32 +15131,6 @@ property_value: editor_note "consider merging with vasculature" xsd:string property_value: UBPROP:0000001 "The cardiovascular and lymphatic systems, collectively[ncithesaurus:Vascular_System]." xsd:string {source="ncithesaurus:Vascular_System"} property_value: UBPROP:0000012 "in both MA and BTO, the arterial system and venous sytem are subtypes of the vascular system" xsd:string {external_ontology="MA"} -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0009142 name: entire embryonic mesenchyme @@ -15482,7 +15291,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -16293,6 +16101,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -17418,6 +17234,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.owl b/src/ontology/subsets/blood_and_immune_upper_slim.owl index e8ad59f31..36e01f07d 100644 --- a/src/ontology/subsets/blood_and_immune_upper_slim.owl +++ b/src/ontology/subsets/blood_and_immune_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4465,6 +4465,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -14385,10 +14416,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -19702,35 +19735,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -19983,32 +19987,32 @@ For example, A and B may be gene products and binding of B by A positively regul + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -21920,27 +21924,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -32133,13 +32116,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -32167,7 +32150,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -32316,7 +32299,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -32502,7 +32485,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -32547,7 +32530,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -32781,13 +32764,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -37355,6 +37338,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -37416,123 +37400,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - @@ -38366,7 +38233,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -38402,14 +38269,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -38556,53 +38423,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - - - - - - - - - - - - uberon - UBERON:0000154 - posterior region of body - - - - @@ -38618,19 +38438,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -38703,22 +38516,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -38841,15 +38644,15 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -38891,34 +38694,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -39222,7 +39025,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39264,14 +39067,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -40014,12 +39817,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -40063,6 +39861,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -40524,7 +40332,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -40562,14 +40370,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -40622,7 +40430,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -40659,14 +40467,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -40711,7 +40519,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -40756,7 +40564,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -40769,7 +40577,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -40976,7 +40784,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41053,14 +40861,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -41250,160 +41058,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -41725,7 +41379,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41778,14 +41432,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -41873,7 +41527,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -41920,7 +41574,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -41934,7 +41588,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -42215,6 +41869,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -42428,7 +42083,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Skeletal element that is composed of bone tissue. @@ -42478,14 +42133,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone element - + - + VSAO-modified @@ -42596,7 +42251,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -42638,14 +42293,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -42922,8 +42577,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -42936,7 +42591,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -42995,34 +42650,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -43745,7 +43400,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43779,14 +43434,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -43915,7 +43570,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43956,14 +43611,14 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -44071,9 +43726,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -44128,15 +43783,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -44155,19 +43810,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -44252,8 +43907,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -44299,11 +43954,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -44316,13 +43971,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -44435,12 +44090,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -44480,66 +44135,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -44727,7 +44382,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -44785,14 +44440,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg - + - + FMA MA @@ -45063,14 +44718,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -45115,24 +44770,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -45503,7 +45158,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -45528,14 +45183,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -45765,9 +45420,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -45799,34 +45454,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -45891,7 +45546,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -45920,7 +45575,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -45933,7 +45588,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -46005,7 +45660,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -46049,7 +45704,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -46062,7 +45717,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -46146,15 +45801,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -46174,15 +45829,15 @@ For example, A and B may be gene products and binding of B by A positively regul heart primordium - + - + - + @@ -46195,19 +45850,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + ZFA - + XAO @@ -46262,8 +45917,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -46291,11 +45946,11 @@ For example, A and B may be gene products and binding of B by A positively regul sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -46314,13 +45969,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + VHOG:0000680 - + ZFA @@ -46592,7 +46247,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -46608,14 +46263,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -46934,8 +46589,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46948,24 +46603,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -47024,7 +46679,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -47044,14 +46699,14 @@ For example, A and B may be gene products and binding of B by A positively regul heart tube - + - + ZFA-modified @@ -47670,7 +47325,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -47684,7 +47339,7 @@ For example, A and B may be gene products and binding of B by A positively regul Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue - + @@ -47697,7 +47352,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + 2012-08-14 VSAO:0000015 VSAO @@ -47736,7 +47391,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -47752,14 +47407,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -47804,7 +47459,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -47843,14 +47498,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -48610,7 +48265,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -48626,14 +48281,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -48744,7 +48399,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -48763,14 +48418,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive heart tube - + - + ZFA @@ -48944,7 +48599,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -48954,7 +48609,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005856 developing mesenchymal condensation - + @@ -48973,7 +48628,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO-modified-relation @@ -49078,7 +48733,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -49093,7 +48748,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -49106,7 +48761,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -49143,7 +48798,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -49160,14 +48815,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -49243,41 +48898,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -49909,7 +49529,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -49924,14 +49544,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -50021,7 +49641,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50038,14 +49658,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -50144,7 +49764,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50170,7 +49790,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -50186,7 +49806,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -50262,7 +49882,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -50270,7 +49890,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -50283,7 +49903,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -50380,7 +50000,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -50399,14 +50019,14 @@ For example, A and B may be gene products and binding of B by A positively regul vascular system - + - + MA @@ -50436,99 +50056,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -50539,7 +50066,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50556,14 +50083,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -50619,7 +50146,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -50627,14 +50154,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -50656,7 +50183,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -50666,14 +50193,14 @@ For example, A and B may be gene products and binding of B by A positively regul anterior lateral plate mesoderm - + - + ZFA @@ -50807,7 +50334,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50827,14 +50354,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010210 blood clot - + - + BTO @@ -50956,8 +50483,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -50970,11 +50497,11 @@ For example, A and B may be gene products and binding of B by A positively regul subdivision of skeleton - + - + @@ -50987,13 +50514,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + UBERONREF:0000003 - + VSAO @@ -51038,12 +50565,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -51070,7 +50591,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -51080,7 +50601,7 @@ For example, A and B may be gene products and binding of B by A positively regul postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -51093,7 +50614,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -51358,7 +50879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -51380,7 +50901,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0012429 hematopoietic tissue - + @@ -51393,7 +50914,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + defitional @@ -51967,7 +51488,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -51990,7 +51511,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0016887 entire extraembryonic component - + @@ -52003,7 +51524,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.tsv b/src/ontology/subsets/blood_and_immune_upper_slim.tsv index 49d4cdf19..bc02e85e2 100644 --- a/src/ontology/subsets/blood_and_immune_upper_slim.tsv +++ b/src/ontology/subsets/blood_and_immune_upper_slim.tsv @@ -1,396 +1,395 @@ ?x ?label -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1014 -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1027 -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1041 -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1057 -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1075 -_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid1082 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+_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid703 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid712 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid720 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid753 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid764 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid779 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid832 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid849 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid869 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid884 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid939 +_:B401aa5d3X2D71a9X2D4aa1X2Da48dX2Dfa166a9c6ddagenid970 "continuant" "occurrent" "independent continuant" @@ -635,7 +634,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "system process" "muscle system process" "circulatory system process" - "respiratory system process" "molecular_function" "transmembrane signaling receptor activity" "G protein-coupled receptor activity" @@ -694,7 +692,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "blood coagulation" "hemostasis" @@ -1156,7 +1153,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "protein-containing material entity" "processual entity" "tube" - "head" "vessel" "anatomical wall" "anatomical structure" @@ -1175,8 +1171,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "gastrula stage" "neurula stage" "organogenesis stage" - "anterior region of body" - "posterior region of body" "mouth" "blood" "haemolymphatic fluid" @@ -1205,7 +1199,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "stomodeum" "heart" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" @@ -1297,7 +1290,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "notochordal plate" "notochordal process" "bodily fluid" - "pharynx" "presumptive endoderm" "presumptive blood" "presumptive structure" @@ -1320,7 +1312,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "migrating mesenchyme population" "anlage" "vascular system" - "craniocervical region" "entire embryonic mesenchyme" "subdivision of trunk" "trunk paraxial mesoderm" diff --git a/src/ontology/subsets/eye_upper_slim.json b/src/ontology/subsets/eye_upper_slim.json index 9da4ba3d8..45ef90be0 100644 --- a/src/ontology/subsets/eye_upper_slim.json +++ b/src/ontology/subsets/eye_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/eye_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/eye_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -1345,7 +1345,7 @@ "xrefs" : [ "MESH:D009457" ] }, "comments" : [ "Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571" ], - "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], + "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim" ], "synonyms" : [ { "pred" : "hasExactSynonym", "val" : "neuroglial cell" @@ -1361,10 +1361,6 @@ "val" : "FBbt:00005144" }, { "val" : "FMA:54536" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -2821,6 +2817,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2831,6 +2828,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -3176,8 +3177,8 @@ "type" : "CLASS", "meta" : { "definition" : { - "val" : "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.", - "xrefs" : [ "GOC:tfm", "ISBN:978-0-7020-2958-5" ] + "val" : "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate.", + "xrefs" : [ "GOC:tfm", "ISBN:9780702029585" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/cl#eye_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { @@ -4214,28 +4215,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0005575", "lbl" : "cellular_component", @@ -10828,11 +10807,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10857,7 +10836,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11009,7 +10988,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11197,7 +11176,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -11242,7 +11221,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -11480,11 +11459,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -16387,6 +16366,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -19955,6 +19976,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -24440,116 +24464,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -25352,6 +25266,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -37900,18 +37816,6 @@ }, { "pred" : "http://xmlns.com/foaf/0.1/depiction", "val" : "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" }, { "pred" : "http://xmlns.com/foaf/0.1/depiction", "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" @@ -39215,8 +39119,6 @@ "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy" ], "xrefs" : [ { "val" : "AAO:0010270" - }, { - "val" : "AEO:0000154" }, { "val" : "ZFA:0005594" } ], @@ -41900,14 +41802,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003015", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003013" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0005575", "pred" : "is_a", @@ -44862,24 +44756,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -45105,7 +44985,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -45598,26 +45484,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000982", "pred" : "http://purl.obolibrary.org/obo/RO_0002433", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001434" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -50561,10 +50427,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -51535,6 +51397,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -52491,6 +52365,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -54245,13 +54123,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0001908" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/src/ontology/subsets/eye_upper_slim.obo b/src/ontology/subsets/eye_upper_slim.obo index 42403ed5a..700f7144d 100644 --- a/src/ontology/subsets/eye_upper_slim.obo +++ b/src/ontology/subsets/eye_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/eye_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/eye_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/eye_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -542,7 +542,6 @@ name: glial cell def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [MESH:D009457] comment: Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 subset: general_cell_types_upper_slim -subset: human_reference_atlas synonym: "neuroglia" RELATED [] synonym: "neuroglial cell" EXACT [] xref: BTO:0002606 @@ -550,7 +549,6 @@ xref: CALOHA:TS-0415 xref: FBbt:00005144 xref: FMA:54536 is_a: CL:0000095 ! neuron associated cell -relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000126 @@ -1564,6 +1562,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1573,6 +1572,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000988 @@ -1759,7 +1759,7 @@ creation_date: 2010-09-15T03:39:21Z [Term] id: CL:0002363 name: keratocyte -def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate." [GOC:tfm, ISBN:978-0-7020-2958-5] +def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate." [GOC:tfm, ISBN:9780702029585] subset: eye_upper_slim subset: human_reference_atlas synonym: "corneal fibroblast" EXACT [] @@ -2363,17 +2363,6 @@ def: "A circulatory system process carried out by the heart. The heart is a holl synonym: "cardiac process" RELATED [] is_a: GO:0003013 ! circulatory system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0005575 name: cellular_component @@ -5705,8 +5694,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -5718,7 +5707,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -5787,7 +5776,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -5863,7 +5852,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -5880,7 +5869,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -5983,8 +5972,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7089,6 +7078,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7881,8 +7871,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -8440,7 +8428,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -9331,69 +9319,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0004456 ! entire sense organ system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -9796,6 +9721,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -16073,10 +15999,6 @@ xref: Wikipedia:Ciliary_processes is_a: UBERON:0000481 ! multi-tissue structure relationship: part_of UBERON:0001775 ! ciliary body property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" xsd:anyURI @@ -16106,7 +16028,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -16735,7 +16656,6 @@ namespace: uberon def: "Material anatomical entity that forms the outermost boundary of an anatomical structure." [https://github.com/obophenotype/uberon/issues/1324] subset: common_anatomy xref: AAO:0010270 -xref: AEO:0000154 xref: ZFA:0005594 is_a: UBERON:0000465 ! material anatomical entity relationship: bounding_layer_of UBERON:0000061 ! anatomical structure @@ -17185,6 +17105,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -18311,6 +18239,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/src/ontology/subsets/eye_upper_slim.owl b/src/ontology/subsets/eye_upper_slim.owl index 6d5960a50..fec82a604 100644 --- a/src/ontology/subsets/eye_upper_slim.owl +++ b/src/ontology/subsets/eye_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4480,6 +4480,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -9034,7 +9065,6 @@ For example, A and B may be gene products and binding of B by A positively regul A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. - BTO:0002606 CALOHA:TS-0415 FBbt:00005144 @@ -9042,7 +9072,6 @@ For example, A and B may be gene products and binding of B by A positively regul neuroglial cell neuroglia - Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell @@ -12368,10 +12397,12 @@ radial glial cells acting as neural progenitors throughout life. A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -12900,7 +12931,7 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. 2010-09-22T01:57:40Z @@ -12913,9 +12944,9 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. GOC:tfm - ISBN:978-0-7020-2958-5 + ISBN:9780702029585 @@ -14682,35 +14713,6 @@ plexiform layer. - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -14813,32 +14815,32 @@ plexiform layer. + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -23447,13 +23449,13 @@ plexiform layer. mice - + mouse - + @@ -23481,7 +23483,7 @@ plexiform layer. mouse - + @@ -23630,7 +23632,7 @@ plexiform layer. eukaryotes - + @@ -23816,7 +23818,7 @@ plexiform layer. multicellular animals - + @@ -23861,7 +23863,7 @@ plexiform layer. deuterostomes - + @@ -24095,13 +24097,13 @@ plexiform layer. eutherian mammals - + placental mammals - + @@ -26678,6 +26680,7 @@ plexiform layer. + BFO:0000003 uberon UBERON:0000000 @@ -26724,7 +26727,7 @@ plexiform layer. - + @@ -26765,14 +26768,14 @@ plexiform layer. camera-type eye - + - + definitional @@ -27871,7 +27874,7 @@ plexiform layer. - + The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube) @@ -27897,7 +27900,7 @@ plexiform layer. external ectoderm http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png - + @@ -27910,7 +27913,7 @@ plexiform layer. - + EHDAA2 @@ -28292,7 +28295,7 @@ plexiform layer. - + @@ -28328,14 +28331,14 @@ plexiform layer. gastrula stage - + - + BILS @@ -28589,19 +28592,12 @@ plexiform layer. - - - - - - - @@ -28674,22 +28670,12 @@ plexiform layer. https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -28812,15 +28798,15 @@ plexiform layer. - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -28862,34 +28848,34 @@ plexiform layer. blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -29193,7 +29179,7 @@ plexiform layer. - + @@ -29235,14 +29221,14 @@ plexiform layer. organism substance - + - + this relationship may be too strong and may be weakened in future @@ -29985,12 +29971,7 @@ plexiform layer. - - - - - - + @@ -30034,6 +30015,16 @@ plexiform layer. epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -30598,7 +30589,7 @@ plexiform layer. - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -30636,14 +30627,14 @@ plexiform layer. ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -30696,7 +30687,7 @@ plexiform layer. - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -30733,14 +30724,14 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -30785,7 +30776,7 @@ plexiform layer. - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -30830,7 +30821,7 @@ plexiform layer. mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -30843,7 +30834,7 @@ plexiform layer. - + Bgee:AN @@ -31065,7 +31056,7 @@ plexiform layer. - + @@ -31131,14 +31122,14 @@ plexiform layer. cranial nerve II - + - + EHDAA2 @@ -31282,7 +31273,7 @@ plexiform layer. - + @@ -31359,14 +31350,14 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -31444,7 +31435,7 @@ plexiform layer. - + @@ -31469,7 +31460,7 @@ plexiform layer. - + The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. requires review for applicability to invertebrate structures, e.g. synganglion @@ -31532,11 +31523,11 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb - + - + @@ -31549,13 +31540,13 @@ plexiform layer. - + FMA - + Bgee:AN @@ -31856,9 +31847,9 @@ plexiform layer. + + - - @@ -31883,7 +31874,7 @@ plexiform layer. - + @@ -31939,44 +31930,44 @@ plexiform layer. cornea http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + MA - + MA - + FMA-isa - + definitional @@ -32165,10 +32156,10 @@ plexiform layer. + + - - The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. @@ -32219,44 +32210,44 @@ plexiform layer. retina http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png - + - + - + - + - + FMA - + FMA - + FMA - + EHDAA2 @@ -32330,8 +32321,8 @@ plexiform layer. - - + + @@ -32367,24 +32358,24 @@ plexiform layer. eye - + - + - + PMID:21062451 - + PMID:21062451 @@ -32518,160 +32509,6 @@ plexiform layer. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -32993,7 +32830,7 @@ plexiform layer. - + @@ -33046,14 +32883,14 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -33141,7 +32978,7 @@ plexiform layer. - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -33188,7 +33025,7 @@ plexiform layer. central nervous system - + @@ -33202,7 +33039,7 @@ plexiform layer. - + Bgee:AN @@ -33737,6 +33574,7 @@ plexiform layer. AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -33949,7 +33787,7 @@ plexiform layer. - + Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 @@ -33974,14 +33812,14 @@ plexiform layer. mesothelium http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg - + - + FMA @@ -34354,7 +34192,7 @@ plexiform layer. - + A tube extending from the mouth to the anus. @@ -34396,14 +34234,14 @@ plexiform layer. digestive tract - + - + NCBIBook:NBK10107 @@ -34483,7 +34321,7 @@ plexiform layer. - + The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 @@ -34506,7 +34344,7 @@ plexiform layer. ciliary muscle http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png - + @@ -34525,7 +34363,7 @@ plexiform layer. - + FMA @@ -34666,7 +34504,7 @@ plexiform layer. - + @@ -34718,14 +34556,14 @@ plexiform layer. eyelid https://upload.wikimedia.org/wikipedia/commons/8/84/Eye_makeup.jpg - + - + multiple @@ -35020,7 +34858,7 @@ plexiform layer. - + @@ -35063,14 +34901,14 @@ plexiform layer. iris - + - + XAO @@ -35142,7 +34980,7 @@ plexiform layer. - + @@ -35194,14 +35032,14 @@ plexiform layer. corneal epithelium http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + ISBN:0781772214 @@ -35297,16 +35135,16 @@ plexiform layer. - - + + - - + + @@ -35348,44 +35186,44 @@ plexiform layer. sclera http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + FMA - + ZFA - + ISBN:0781772214 - + cjm ISBN:0781772214 Wikipedia @@ -35445,7 +35283,7 @@ plexiform layer. - + @@ -35484,14 +35322,14 @@ plexiform layer. ciliary body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + ISBN:0781772214 @@ -35539,14 +35377,14 @@ plexiform layer. - + - + @@ -35609,24 +35447,24 @@ plexiform layer. optic choroid http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + MA - + Wikipedia @@ -35726,7 +35564,7 @@ plexiform layer. - + @@ -35775,14 +35613,14 @@ plexiform layer. substantia propria of cornea http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + cjm ISBN:0781772214 Wikipedia @@ -35859,9 +35697,9 @@ plexiform layer. - - - + + + A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 @@ -35881,15 +35719,15 @@ plexiform layer. ciliary epithelium - + - + - + @@ -35902,19 +35740,19 @@ plexiform layer. - + MA - + MP - + Wikipedia @@ -36037,7 +35875,7 @@ plexiform layer. - + @@ -36098,14 +35936,14 @@ plexiform layer. pigmented layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + Wikipedia @@ -36209,7 +36047,7 @@ plexiform layer. - + @@ -36243,14 +36081,14 @@ plexiform layer. photoreceptor layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + ZFA @@ -36423,7 +36261,7 @@ plexiform layer. - + @@ -36470,14 +36308,14 @@ plexiform layer. outer nuclear layer of retina - + - + soma ZFA @@ -36815,7 +36653,7 @@ plexiform layer. - + @@ -36874,7 +36712,7 @@ plexiform layer. ganglionic layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + @@ -36887,7 +36725,7 @@ plexiform layer. - + FMA @@ -36963,7 +36801,7 @@ plexiform layer. - + @@ -37019,14 +36857,14 @@ plexiform layer. nerve fiber layer of retina - + - + FMA @@ -37404,7 +37242,7 @@ plexiform layer. - + @@ -37440,14 +37278,14 @@ plexiform layer. aqueous humor of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + FMA def states A and P located_in in EHDAA2 VHOG @@ -37629,7 +37467,7 @@ plexiform layer. - + @@ -37653,7 +37491,7 @@ plexiform layer. vitreous body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + @@ -37666,7 +37504,7 @@ plexiform layer. - + neural ectoderm of optic cup ISBN:0781772214 @@ -37801,8 +37639,8 @@ plexiform layer. - - + + @@ -37835,24 +37673,24 @@ plexiform layer. anterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png - + - + - + FMA - + cjm @@ -37903,8 +37741,8 @@ plexiform layer. - - + + @@ -37934,24 +37772,24 @@ plexiform layer. posterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + FMA - + cjm @@ -37987,9 +37825,9 @@ plexiform layer. - - - + + + @@ -38039,15 +37877,15 @@ plexiform layer. conjunctiva http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png - + - + - + @@ -38060,19 +37898,19 @@ plexiform layer. - + cjm - + MA - + ISBN:0781772214 @@ -38136,7 +37974,7 @@ plexiform layer. - + The most anterior region of the brain including both the telencephalon and diencephalon. @@ -38183,14 +38021,14 @@ plexiform layer. forebrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -38266,14 +38104,14 @@ plexiform layer. - + - + The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. developmental relationships need revised @@ -38326,24 +38164,24 @@ plexiform layer. midbrain http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG - + - + - + definitional - + Bgee:AN @@ -38446,14 +38284,14 @@ plexiform layer. - + - + The division of the forebrain that develops from the foremost primary cerebral vesicle. @@ -38516,24 +38354,24 @@ plexiform layer. diencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + definitional - + definitional @@ -38971,7 +38809,7 @@ plexiform layer. - + Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG] @@ -39011,14 +38849,14 @@ plexiform layer. midbrain tegmentum http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png - + - + ZFA @@ -39197,8 +39035,8 @@ plexiform layer. - - + + @@ -39211,7 +39049,7 @@ plexiform layer. - + @@ -39270,34 +39108,34 @@ plexiform layer. blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -39656,7 +39494,7 @@ plexiform layer. - + @@ -39669,7 +39507,7 @@ plexiform layer. - + The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. @@ -39720,25 +39558,25 @@ plexiform layer. hindbrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + modified-source-relation ABA - + Bgee:AN @@ -40557,7 +40395,7 @@ plexiform layer. - + Vasculature that is part of the eye region. not part of the eye in ZFA. Note this changed to a blood vessel in ZFA @@ -40580,14 +40418,14 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb - + - + ISBN:0781772214 @@ -40646,7 +40484,7 @@ plexiform layer. - + @@ -40680,14 +40518,14 @@ plexiform layer. musculoskeletal system - + - + check ctenophore @@ -40825,15 +40663,15 @@ plexiform layer. - + - - + + Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). TODO - add superclass to unify with VNC? @@ -40892,34 +40730,34 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb - + - + - + - + ZFA - + definitional - + definitional @@ -41361,7 +41199,7 @@ plexiform layer. - + @@ -41402,14 +41240,14 @@ plexiform layer. EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -41517,9 +41355,9 @@ plexiform layer. - - - + + + @@ -41574,15 +41412,15 @@ plexiform layer. notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -41601,19 +41439,19 @@ plexiform layer. - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -41698,8 +41536,8 @@ plexiform layer. - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -41745,11 +41583,11 @@ plexiform layer. somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -41762,13 +41600,13 @@ plexiform layer. - + GOTAX:0000352 - + ZFA @@ -41881,12 +41719,12 @@ plexiform layer. - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -41926,66 +41764,66 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -42368,14 +42206,14 @@ plexiform layer. - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -42420,24 +42258,24 @@ plexiform layer. hematopoietic system - + - + - + FMA - + definitional @@ -42502,8 +42340,8 @@ plexiform layer. - - + + @@ -42529,11 +42367,11 @@ plexiform layer. iris epithelium - + - + @@ -42546,13 +42384,13 @@ plexiform layer. - + MA - + MP @@ -42702,7 +42540,7 @@ plexiform layer. - + Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. Do not merge with neurogenic placode Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons @@ -42722,7 +42560,7 @@ plexiform layer. cranial placode - + @@ -42735,7 +42573,7 @@ plexiform layer. - + PMID:11523831 PMID:22512454 @@ -42940,7 +42778,7 @@ plexiform layer. - + @@ -42953,7 +42791,7 @@ plexiform layer. - + The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. consider adding class for organizer. Consider adding separate class for isthmus as a structure Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG] @@ -42983,11 +42821,11 @@ plexiform layer. midbrain-hindbrain boundary - + - + @@ -43001,13 +42839,13 @@ plexiform layer. - + ZFA - + ZFA @@ -43172,7 +43010,7 @@ plexiform layer. - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -43197,14 +43035,14 @@ plexiform layer. presomitic mesoderm - + - + Bgee:AN @@ -43446,7 +43284,7 @@ plexiform layer. - + @@ -43484,7 +43322,7 @@ plexiform layer. eye primordium - + @@ -43497,7 +43335,7 @@ plexiform layer. - + PMID:16496288 XAO @@ -43553,8 +43391,8 @@ plexiform layer. - - + + @@ -43583,24 +43421,24 @@ plexiform layer. optic cup - + - + - + ZFA - + ZFA @@ -43665,7 +43503,7 @@ plexiform layer. - + @@ -43706,7 +43544,7 @@ plexiform layer. lens placode http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png - + @@ -43719,7 +43557,7 @@ plexiform layer. - + ZFA @@ -43783,9 +43621,9 @@ plexiform layer. - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -43817,34 +43655,34 @@ plexiform layer. neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -43955,7 +43793,7 @@ plexiform layer. - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -43984,7 +43822,7 @@ plexiform layer. paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43997,7 +43835,7 @@ plexiform layer. - + Bgee:AN @@ -44109,7 +43947,7 @@ plexiform layer. - + @@ -44153,7 +43991,7 @@ plexiform layer. lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -44166,7 +44004,7 @@ plexiform layer. - + EHDAA2 VHOG @@ -44250,15 +44088,15 @@ plexiform layer. - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -44278,15 +44116,15 @@ plexiform layer. heart primordium - + - + - + @@ -44299,19 +44137,19 @@ plexiform layer. - + ZFA - + ZFA - + XAO @@ -44366,8 +44204,8 @@ plexiform layer. - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -44395,11 +44233,11 @@ plexiform layer. sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -44418,13 +44256,13 @@ plexiform layer. - + VHOG:0000680 - + ZFA @@ -44848,7 +44686,7 @@ plexiform layer. - + Mesenchyme that is part of a developing camera-type eye. TODO - change mesenchyme relationships to precursor_of EHDAA2:0000485 @@ -44860,14 +44698,14 @@ plexiform layer. UBERON:0003314 eye mesenchyme - + - + EHDAA2 @@ -45725,7 +45563,7 @@ plexiform layer. - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -45741,14 +45579,14 @@ plexiform layer. intraembryonic coelom - + - + Wikipedia @@ -45853,7 +45691,7 @@ plexiform layer. - + The part of the retina that contains neurons and photoreceptor cells[GO]. (...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG] @@ -45885,14 +45723,14 @@ plexiform layer. retinal neural layer - + - + Bgee:AN @@ -46150,7 +45988,7 @@ plexiform layer. - + The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure The layer of undifferentiated, proliferating cells that line the neural tube lumen @@ -46168,7 +46006,7 @@ plexiform layer. neural tube ventricular layer - + @@ -46181,7 +46019,7 @@ plexiform layer. - + NCBIBook:NBK10047 @@ -46241,7 +46079,7 @@ plexiform layer. - + @@ -46265,7 +46103,7 @@ plexiform layer. neural tube mantle layer - + @@ -46278,7 +46116,7 @@ plexiform layer. - + by division NCBIBook:NBK10047 @@ -46315,7 +46153,7 @@ plexiform layer. - + @@ -46332,14 +46170,14 @@ plexiform layer. neural tube marginal layer - + - + forms from axons @@ -46614,9 +46452,9 @@ plexiform layer. - - - + + + @@ -46649,34 +46487,34 @@ plexiform layer. optic vesicle http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png - + - + - + - + ZFA - + GO-def - + ZFA @@ -46792,8 +46630,8 @@ plexiform layer. - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46806,24 +46644,24 @@ plexiform layer. UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -46882,7 +46720,7 @@ plexiform layer. - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -46902,14 +46740,14 @@ plexiform layer. heart tube - + - + ZFA-modified @@ -46990,7 +46828,7 @@ plexiform layer. - + @@ -47006,14 +46844,14 @@ plexiform layer. eye muscle - + - + MA @@ -47217,7 +47055,7 @@ plexiform layer. - + A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN] @@ -47247,14 +47085,14 @@ plexiform layer. Descemet's membrane https://github.com/obophenotype/uberon/issues/15 - + - + Cline et al @@ -48039,7 +47877,7 @@ plexiform layer. - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -48055,14 +47893,14 @@ plexiform layer. skeletal element - + - + VSAO @@ -48107,7 +47945,7 @@ plexiform layer. - + @@ -48146,14 +47984,14 @@ plexiform layer. UBERON:0004770 articular system - + - + FMA @@ -49062,7 +48900,7 @@ plexiform layer. - + Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO] EFO:0003492 @@ -49084,14 +48922,14 @@ plexiform layer. head mesenchyme - + - + EHDAA2 @@ -49158,7 +48996,7 @@ plexiform layer. - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -49174,14 +49012,14 @@ plexiform layer. trunk mesenchyme - + - + EHDAA2 @@ -49204,7 +49042,7 @@ plexiform layer. - + The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG] @@ -49229,14 +49067,14 @@ plexiform layer. myelencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -49763,7 +49601,7 @@ plexiform layer. - + Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 @@ -49771,7 +49609,7 @@ plexiform layer. UBERON:0005427 corneal primordium - + @@ -49790,7 +49628,7 @@ plexiform layer. - + ZFA @@ -49813,7 +49651,7 @@ plexiform layer. - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -49832,14 +49670,14 @@ plexiform layer. primitive heart tube - + - + ZFA @@ -50048,7 +49886,7 @@ plexiform layer. - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -50058,7 +49896,7 @@ plexiform layer. UBERON:0005856 developing mesenchymal condensation - + @@ -50077,7 +49915,7 @@ plexiform layer. - + AEO-modified-relation @@ -50134,9 +49972,9 @@ plexiform layer. - - - + + + A serous sac which is the aggregate of the conjunctiva plus the conjunctival space. EMAPA:18233 FMA:20291 @@ -50147,15 +49985,15 @@ plexiform layer. UBERON:0005908 conjunctival sac - + - + - + @@ -50168,19 +50006,19 @@ plexiform layer. - + FMA - + HPO:pr - + MA @@ -50435,7 +50273,7 @@ plexiform layer. - + @@ -50458,14 +50296,14 @@ plexiform layer. future diencephalon - + - + EHDAA2 @@ -50648,7 +50486,7 @@ plexiform layer. - + @@ -50672,14 +50510,14 @@ plexiform layer. future spinal cord - + - + EHDAA2 @@ -50716,7 +50554,7 @@ plexiform layer. - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -50731,7 +50569,7 @@ plexiform layer. notochordal plate - + @@ -50744,7 +50582,7 @@ plexiform layer. - + EHDAA2 @@ -50781,7 +50619,7 @@ plexiform layer. - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -50798,14 +50636,14 @@ plexiform layer. The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -51709,7 +51547,7 @@ plexiform layer. - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -51724,14 +51562,14 @@ plexiform layer. Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -51886,8 +51724,8 @@ plexiform layer. - - + + @@ -51914,24 +51752,24 @@ plexiform layer. presumptive hindbrain - + - + - + XAO-abduced - + cjm @@ -51988,7 +51826,7 @@ plexiform layer. - + @@ -52007,14 +51845,14 @@ plexiform layer. presumptive midbrain hindbrain boundary - + - + ZFA @@ -52053,7 +51891,7 @@ plexiform layer. - + @@ -52070,14 +51908,14 @@ plexiform layer. presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -52176,7 +52014,7 @@ plexiform layer. - + @@ -52202,7 +52040,7 @@ plexiform layer. presumptive paraxial mesoderm - + @@ -52218,7 +52056,7 @@ plexiform layer. - + https://github.com/obophenotype/uberon/issues/1277 @@ -52300,7 +52138,7 @@ plexiform layer. - + A neural decussation that is part of a diencephalon. FMA:62446 diencephalon decussation @@ -52308,7 +52146,7 @@ plexiform layer. UBERON:0007425 decussation of diencephalon - + @@ -52321,7 +52159,7 @@ plexiform layer. - + Obol @@ -52396,7 +52234,7 @@ plexiform layer. - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -52404,7 +52242,7 @@ plexiform layer. UBERON:0007524 dense mesenchyme tissue - + @@ -52417,7 +52255,7 @@ plexiform layer. - + AEO @@ -52657,7 +52495,7 @@ plexiform layer. - + An axon tract that is part of a brain. the NIFSTD class 'nerve tract' is classified under 'regional part of brain', so it may seem like it belongs here, but actually includes spinal cord tracts FMA:83848 @@ -52667,14 +52505,14 @@ plexiform layer. UBERON:0007702 tract of brain - + - + cjm @@ -52702,7 +52540,7 @@ plexiform layer. - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -52721,14 +52559,14 @@ plexiform layer. vascular system - + - + MA @@ -52861,7 +52699,7 @@ plexiform layer. - + @@ -52878,14 +52716,14 @@ plexiform layer. UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -52981,8 +52819,8 @@ plexiform layer. - - + + TODO - developmental relationships for lines TAO:0007044 ZFA:0007044 @@ -52992,24 +52830,24 @@ plexiform layer. UBERON:0009615 midbrain hindbrain boundary neural plate - + - + - + ZFA - + https://github.com/obophenotype/uberon/issues/438 Bgee:AN @@ -53043,14 +52881,14 @@ plexiform layer. - + - + @@ -53075,24 +52913,24 @@ plexiform layer. presumptive midbrain - + - + - + ZFA - + ZFA @@ -53138,7 +52976,7 @@ plexiform layer. - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -53146,14 +52984,14 @@ plexiform layer. UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -53175,7 +53013,7 @@ plexiform layer. - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -53185,14 +53023,14 @@ plexiform layer. anterior lateral plate mesoderm - + - + ZFA @@ -53248,14 +53086,14 @@ plexiform layer. - + EHDAA2:0001315 EHDAA:1122 uberon UBERON:0009920 optic neural crest - + @@ -53268,7 +53106,7 @@ plexiform layer. - + EHDAA2 @@ -53402,7 +53240,7 @@ plexiform layer. - + @@ -53427,14 +53265,14 @@ plexiform layer. eyeball of camera-type eye - + - + FMA @@ -53475,8 +53313,8 @@ plexiform layer. - - + + Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 @@ -53490,11 +53328,11 @@ plexiform layer. midbrain basal plate - + - + @@ -53507,13 +53345,13 @@ plexiform layer. - + EHDAA2 - + ZFA @@ -53541,7 +53379,7 @@ plexiform layer. - + Portion of neural tube that gives rise to the midbrain. we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed TAO:0007039 @@ -53550,14 +53388,14 @@ plexiform layer. UBERON:0010286 midbrain neural tube - + - + ZFA @@ -53584,7 +53422,7 @@ plexiform layer. - + @@ -53600,14 +53438,14 @@ plexiform layer. UBERON:0010312 immature eye - + - + definitional @@ -53825,10 +53663,6 @@ plexiform layer. UBERON:0010427 ciliary processes http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb @@ -53885,8 +53719,8 @@ plexiform layer. - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -53899,11 +53733,11 @@ plexiform layer. subdivision of skeleton - + - + @@ -53916,13 +53750,13 @@ plexiform layer. - + UBERONREF:0000003 - + VSAO @@ -53967,12 +53801,6 @@ plexiform layer. - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -53999,7 +53827,7 @@ plexiform layer. - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -54009,7 +53837,7 @@ plexiform layer. postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -54022,7 +53850,7 @@ plexiform layer. - + cjm @@ -54134,7 +53962,7 @@ plexiform layer. - + Muscles within the eye (bulbus oculi).[AAO] AAO:0010038 EMAPA:18808 @@ -54145,14 +53973,14 @@ plexiform layer. UBERON:0011222 intra-ocular muscle - + - + EMAPA @@ -54422,7 +54250,7 @@ plexiform layer. - + @@ -54464,7 +54292,7 @@ plexiform layer. anterior uvea - + @@ -54477,7 +54305,7 @@ plexiform layer. - + MP @@ -55257,7 +55085,7 @@ plexiform layer. - + @@ -55280,7 +55108,7 @@ plexiform layer. UBERON:0016887 entire extraembryonic component - + @@ -55293,7 +55121,7 @@ plexiform layer. - + AEO @@ -55986,7 +55814,6 @@ plexiform layer. AAO:0010270 - AEO:0000154 ZFA:0005594 uberon UBERON:0036215 diff --git a/src/ontology/subsets/eye_upper_slim.tsv b/src/ontology/subsets/eye_upper_slim.tsv index 81eae384e..01bb2f0dd 100644 --- a/src/ontology/subsets/eye_upper_slim.tsv +++ b/src/ontology/subsets/eye_upper_slim.tsv @@ -1,323 +1,322 @@ ?x ?label -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1018 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1026 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1033 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1040 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1046 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1056 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1071 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1077 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1084 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1090 -_:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid1096 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+_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid716 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid731 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid786 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid836 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid853 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid866 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid871 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid880 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid886 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid900 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid906 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid914 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid922 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid969 "continuant" "occurrent" "independent continuant" @@ -493,7 +492,6 @@ _:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid969 "muscle system process" "circulatory system process" "heart process" - "respiratory system process" "cellular_component" "extracellular region" "fibrinogen complex" @@ -936,7 +934,6 @@ _:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid969 "retina" "eye" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" diff --git a/src/ontology/subsets/general_cell_types_upper_slim.json b/src/ontology/subsets/general_cell_types_upper_slim.json index 5ec8075d9..98de6c0af 100644 --- a/src/ontology/subsets/general_cell_types_upper_slim.json +++ b/src/ontology/subsets/general_cell_types_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/general_cell_types_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/general_cell_types_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -1340,7 +1340,7 @@ "xrefs" : [ "MESH:D009457" ] }, "comments" : [ "Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571" ], - "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], + "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim" ], "synonyms" : [ { "pred" : "hasExactSynonym", "val" : "neuroglial cell" @@ -1356,10 +1356,6 @@ "val" : "FBbt:00005144" }, { "val" : "FMA:54536" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -1976,16 +1972,6 @@ "val" : "FMA:86667" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/CL_0000335", - "lbl" : "mesenchyme condensation cell", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors.", - "xrefs" : [ "GOC:tfm", "PMID:5025404" ] - } - } }, { "id" : "http://purl.obolibrary.org/obo/CL_0000349", "lbl" : "extraembryonic cell", @@ -2852,6 +2838,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2862,6 +2849,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -4554,28 +4545,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0005575", "lbl" : "cellular_component", @@ -5489,28 +5458,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -10698,11 +10645,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10727,7 +10674,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10879,7 +10826,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11067,7 +11014,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -11112,7 +11059,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -11350,11 +11297,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -16995,6 +16942,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -20563,6 +20552,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -20699,102 +20691,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000043", "lbl" : "tendon", @@ -21826,26 +21722,6 @@ "val" : "https://github.com/obophenotype/uberon/issues/533" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", - 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(Hall and Miyake 1995).", - "xrefs" : [ "GO_REF:0000034", "PSPUB:0000170", "VSAO:0000006", "http://dx.plos.org/10.1371/journal.pone.0051070" ] - }, - "xrefs" : [ { - "val" : "VSAO:0000006" - }, { - "val" : "XAO:0004021" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/IAO_0000116", - "val" : "consider obsoleting, coordinate with VSAO" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0011676", "lbl" : "subdivision of organism along main body axis", @@ -29839,7 +29289,7 @@ } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0014892", - "lbl" : "skeletal muscle organ", + "lbl" : "skeletal muscle organ, vertebrate", "type" : "CLASS", "meta" : { "definition" : { @@ -31639,10 +31089,6 @@ "sub" : "http://purl.obolibrary.org/obo/CL_0000333", "pred" : "http://purl.obolibrary.org/obo/RO_0002202", "obj" : "http://purl.obolibrary.org/obo/CL_0007004" - }, { - "sub" : "http://purl.obolibrary.org/obo/CL_0000335", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/CL_0008019" }, { "sub" : "http://purl.obolibrary.org/obo/CL_0000349", "pred" : "is_a", @@ -33131,14 +32577,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003015", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003013" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0005575", "pred" : "is_a", @@ -33425,10 +32863,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0007498", "pred" : "http://purl.obolibrary.org/obo/RO_0002296", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000926" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0007585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0032501" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0007586", "pred" : "is_a", @@ -35657,18 +35091,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000025", "pred" : "http://purl.obolibrary.org/obo/RO_0000086", "obj" : "http://purl.obolibrary.org/obo/PATO_0002299" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011676" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007811" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000043", "pred" : "is_a", @@ -36019,26 +35441,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000111", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/BSPO_0000096", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000154" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "is_a", @@ -36049,24 +35451,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -36242,7 +35630,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -36411,26 +35805,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000982", "pred" : "http://purl.obolibrary.org/obo/RO_0002433", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001434" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -37370,46 +36744,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0003082", "pred" : "http://purl.obolibrary.org/obo/RO_0002433", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001630" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0003089", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005856", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "EHDAA2" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0003089", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "EHDAA2" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0003089", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_7742", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "VHOG:0000680" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0003089", - "pred" : "http://purl.obolibrary.org/obo/RO_0002202", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0002329", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "ZFA" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0003103", "pred" : "is_a", @@ -37851,52 +37185,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0005769", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", "obj" : "http://purl.obolibrary.org/obo/GO_0005604" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005856", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007524", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "AEO" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005856", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011585", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "cjm" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005856", - "pred" : "http://purl.obolibrary.org/obo/RO_0002473", - "obj" : "http://purl.obolibrary.org/obo/CL_0000335", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "AEO-modified-relation" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005944", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0010912" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005944", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011137" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005944", - "pred" : "http://purl.obolibrary.org/obo/RO_0002202", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0003089" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0005944", - "pred" : "http://purl.obolibrary.org/obo/RO_0002433", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001434" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006267", "pred" : "is_a", @@ -37947,14 +37235,6 @@ "val" : "EHDAA2" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004921" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006595", "pred" : "is_a", @@ -38158,40 +37438,6 @@ "val" : "AEO" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0003104" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "pred" : "http://purl.obolibrary.org/obo/RO_0000056", - "obj" : "http://purl.obolibrary.org/obo/GO_0016477" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0007845", "pred" : "is_a", @@ -38324,36 +37570,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0010371", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", "obj" : "http://purl.obolibrary.org/obo/CL_0002077" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011216", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "cjm" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000075", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "UBERONREF:0000003" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004288", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "VSAO" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "is_a", @@ -38368,10 +37584,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011216", "pred" : "is_a", @@ -38386,16 +37598,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011216", "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000061", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "VSAO" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011676", "pred" : "is_a", @@ -38600,6 +37802,10 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", "pred" : "http://purl.obolibrary.org/obo/RO_0002103", "obj" : "http://purl.obolibrary.org/obo/CL_0000100" + }, { + "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", + "pred" : "http://purl.obolibrary.org/obo/RO_0002160", + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_7742" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", "pred" : "http://purl.obolibrary.org/obo/RO_0002202", @@ -39208,6 +38414,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -40164,6 +39382,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -42109,13 +41331,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/RO_0002493", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0000068" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], @@ -42397,13 +41612,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/RO_0002387", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0003077" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0003104" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0000056", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0016477" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0007846", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0007845" ], @@ -42796,7 +42004,7 @@ }, { "predicateId" : "http://purl.obolibrary.org/obo/RO_0002551", "domainClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000061", "http://purl.obolibrary.org/obo/UBERON_0000475" ], - "rangeClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000465", "http://purl.obolibrary.org/obo/UBERON_0010912" ] + "rangeClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000465" ] }, { "predicateId" : "http://purl.obolibrary.org/obo/RO_0002566", "domainClassIds" : [ "http://purl.obolibrary.org/obo/BFO_0000002" ], diff --git a/src/ontology/subsets/general_cell_types_upper_slim.obo b/src/ontology/subsets/general_cell_types_upper_slim.obo index 49daf86c8..824b27a28 100644 --- a/src/ontology/subsets/general_cell_types_upper_slim.obo +++ b/src/ontology/subsets/general_cell_types_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/general_cell_types_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/general_cell_types_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/general_cell_types_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -565,7 +565,6 @@ name: glial cell def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [MESH:D009457] comment: Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 subset: general_cell_types_upper_slim -subset: human_reference_atlas synonym: "neuroglia" RELATED [] synonym: "neuroglial cell" EXACT [] xref: BTO:0002606 @@ -573,7 +572,6 @@ xref: CALOHA:TS-0415 xref: FBbt:00005144 xref: FMA:54536 is_a: CL:0000095 ! neuron associated cell -relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000133 @@ -943,12 +941,6 @@ is_a: CL:0011012 ! neural crest cell is_a: CL:0011026 ! progenitor cell relationship: develops_from CL:0007004 ! premigratory neural crest cell -[Term] -id: CL:0000335 -name: mesenchyme condensation cell -def: "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors." [GOC:tfm, PMID:5025404] -is_a: CL:0008019 ! mesenchymal cell - [Term] id: CL:0000349 name: extraembryonic cell @@ -1609,6 +1601,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1618,6 +1611,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000842 @@ -2597,17 +2591,6 @@ def: "A circulatory system process carried out by the heart. The heart is a holl synonym: "cardiac process" RELATED [] is_a: GO:0003013 ! circulatory system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0005575 name: cellular_component @@ -3155,16 +3138,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -5773,8 +5746,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -5786,7 +5759,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -5855,7 +5828,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -5931,7 +5904,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -5948,7 +5921,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -6051,8 +6024,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7403,6 +7376,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7464,54 +7438,6 @@ relationship: has_quality PATO:0002299 ! tubular property_value: IAO:0000232 "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string property_value: UBPROP:0000007 "tubular" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000043 name: tendon @@ -8026,22 +7952,6 @@ relationship: simultaneous_with GO:0048513 ! animal organ development property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - -[Term] -id: UBERON:0000154 -name: posterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000165 name: mouth @@ -8100,8 +8010,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -8631,7 +8539,7 @@ union_of: UBERON:0000490 ! unilaminar epithelium relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -8974,7 +8882,6 @@ xref: Wikipedia:Endocrine_system xref: XAO:0000158 xref: ZFA:0001158 is_a: UBERON:0015204 ! glandular system -disjoint_from: UBERON:0001004 ! respiratory system disjoint_from: UBERON:0001007 ! digestive system disjoint_from: UBERON:0001009 ! circulatory system disjoint_from: UBERON:0001016 ! nervous system @@ -9069,71 +8976,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002330 ! exocrine system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0002405 ! immune system -disjoint_from: UBERON:0004456 ! entire sense organ system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -9469,6 +9311,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -9565,7 +9408,7 @@ intersection_of: UBERON:0002385 ! muscle tissue intersection_of: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: develops_from UBERON:0003082 ! myotome -relationship: part_of UBERON:0014892 ! skeletal muscle organ +relationship: part_of UBERON:0014892 ! skeletal muscle organ, vertebrate property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/c/c0/Skeletal_muscle.jpg" xsd:anyURI property_value: editor_note "TODO - add skeletal muscle organ? See GO:0060538 skeletal muscle organ development. Todo - group FBbt:00005073 - somatic muscle." xsd:string property_value: UBPROP:0000001 "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005277", ontology="TAO", source="ZFIN:curator"} @@ -10783,38 +10626,6 @@ property_value: editor_note "The term 'myotome' is also used to describe the mus property_value: UBPROP:0000001 "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001056", ontology="TAO", source="ZFIN:curator"} property_value: UBPROP:0000003 "In all vertebrates, the skeletal muscle of the body axis is chiefly derived from an early embryonic compartment, known as the myotome.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001244", ontology="VHOG", source="DOI:10.1038/sj.embor.embor920 Hollway GE, Currie PD, Myotome meanderings. Cellular morphogenesis and the making of muscle. EMBO Rep.(2003)", source="http://bgee.unil.ch/"} -[Term] -id: UBERON:0003089 -name: sclerotome -namespace: uberon -def: "Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]." [https://github.com/obophenotype/uberon/issues/316, Wikipedia:Sclerotome, XB:curator] -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "sclerotomes" EXACT OMO:0003004 [TAO:0001080] -synonym: "sclerotomus" RELATED LATIN [Wikipedia:Sclerotome] -xref: AAO:0010571 -xref: AEO:0000212 -xref: BTO:0006255 {http://purl.org/dc/terms/contributor="https://orcid.org/0000-0003-4423-4370"} -xref: EHDAA2:0003439 -xref: EMAPA:31159 -xref: FMA:295652 -xref: NCIT:C34287 -xref: TAO:0001080 -xref: UMLS:C0183176 {source="ncithesaurus:Sclerotome"} -xref: VHOG:0000680 -xref: Wikipedia:Sclerotome -xref: XAO:0000397 -xref: ZFA:0001080 -is_a: UBERON:0005856 {source="EHDAA2"} ! developing mesenchymal condensation -is_a: UBERON:0007530 {source="EHDAA2"} ! migrating mesenchyme population -relationship: develops_from UBERON:0002329 {source="ZFA"} ! somite -relationship: only_in_taxon NCBITaxon:7742 {source="VHOG:0000680"} ! Vertebrata -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png" xsd:anyURI -property_value: UBPROP:0000001 "Skeletogenic portion of somites.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010571", ontology="AAO", source="AAO:EJS"} -property_value: UBPROP:0000003 "The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000680", ontology="VHOG", source="DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)", source="http://bgee.unil.ch/"} -property_value: UBPROP:0000012 "part_of somite in XAO" xsd:string {external_ontology="XAO"} - [Term] id: UBERON:0003103 name: compound organ @@ -11411,47 +11222,6 @@ relationship: part_of UBERON:0000483 ! epithelium relationship: present_in_taxon NCBITaxon:80999 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} property_value: IAO:0000232 "this class represents a continuous sheet of basement membrane which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal membrane' represents a portion of substance on the scale of a single cell." xsd:string -[Term] -id: UBERON:0005856 -name: developing mesenchymal condensation -namespace: uberon -def: "A delimited region of dense mesenchyme within looser mesenchyme." [AEO:0000148] -synonym: "mesenchyme condensation" EXACT [EMAPA:25351] -xref: AEO:0000148 -xref: EHDAA2_RETIRED:0003148 -xref: EHDAA:8979 -is_a: UBERON:0007524 {source="AEO"} ! dense mesenchyme tissue -is_a: UBERON:0011585 {source="cjm"} ! cell condensation -relationship: composed_primarily_of CL:0000335 {source="AEO-modified-relation"} ! mesenchyme condensation cell - -[Term] -id: UBERON:0005944 -name: axial skeleton plus cranial skeleton -namespace: uberon -def: "Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]." [FMA:71221, https://github.com/obophenotype/uberon/issues/44, https://github.com/obophenotype/uberon/wiki/The-axial-skeleton, VSAO:0000056, Wikipedia:Axial_skeleton] -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -synonym: "skeleton axiale" RELATED LATIN [Wikipedia:Axial_skeleton] -xref: AAO:0000963 -xref: EMAPA:17214 -xref: EMAPA:18043 -xref: MA:0000308 -xref: NCIT:C32172 -xref: SCTID:361725000 -xref: UMLS:C0222645 {source="ncithesaurus:Axial_Skeleton"} -xref: VSAO:0000056 -xref: Wikipedia:Axial_skeleton -xref: XAO:0004011 -is_a: UBERON:0010912 ! subdivision of skeleton -relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system -relationship: develops_from UBERON:0003089 ! sclerotome -relationship: part_of UBERON:0011137 ! axial skeletal system -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg" xsd:anyURI -property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI -property_value: UBPROP:0000001 "Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000056", ontology="VSAO", source="PSPUB:0000170"} - [Term] id: UBERON:0006267 name: notochordal plate @@ -11492,25 +11262,6 @@ is_a: UBERON:0005423 ! developing anatomical structure relationship: develops_from UBERON:0000924 {source="EHDAA2"} ! ectoderm relationship: only_in_taxon NCBITaxon:7711 ! Chordata -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -11744,45 +11495,6 @@ xref: EHDAA2:0003146 is_a: UBERON:0003104 {source="AEO"} ! mesenchyme relationship: has_part CL:0000057 {source="AEO"} ! fibroblast -[Term] -id: UBERON:0007530 -name: migrating mesenchyme population -namespace: uberon -def: "Mesenchymal cells that are migrating." [AEO:JB] -xref: AEO:0000152 -xref: EHDAA2:0003152 -is_a: UBERON:0003104 ! mesenchyme -intersection_of: UBERON:0003104 ! mesenchyme -intersection_of: participates_in GO:0016477 ! cell migration -relationship: participates_in GO:0016477 ! cell migration -property_value: editor_note "this class will be an important part of the NC reorganization" xsd:string - -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0007845 name: regular connective tissue @@ -11898,22 +11610,6 @@ intersection_of: UBERON:0000483 ! epithelium intersection_of: develops_from UBERON:0000924 ! ectoderm relationship: composed_primarily_of CL:0002077 ! ecto-epithelial cell -[Term] -id: UBERON:0010912 -name: subdivision of skeleton -namespace: uberon -def: "Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] -subset: non_informative -synonym: "skeletal subdivision" EXACT [VSAO:0000042] -synonym: "subdivision of skeleton (in vivo)" RELATED [FMA:23879] -xref: FMA:23879 -xref: SCTID:129140006 -xref: VSAO:0000042 -is_a: UBERON:0011216 {source="cjm"} ! organ system subdivision -relationship: part_of UBERON:0000075 {source="UBERONREF:0000003"} ! subdivision of skeletal system -relationship: part_of UBERON:0004288 {source="VSAO"} ! skeleton -property_value: UBPROP:0000001 "Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000042", notes="incorrect", ontology="VSAO", source="VSAO:curator"} - [Term] id: UBERON:0011137 name: axial skeletal system @@ -11922,7 +11618,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -11941,16 +11636,6 @@ relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa relationship: present_in_taxon NCBITaxon:4751 -[Term] -id: UBERON:0011585 -name: cell condensation -namespace: uberon -def: "Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995)." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, PSPUB:0000170, VSAO:0000006] -xref: VSAO:0000006 -xref: XAO:0004021 -is_a: UBERON:0000061 {source="VSAO"} ! anatomical structure -property_value: editor_note "consider obsoleting, coordinate with VSAO" xsd:string - [Term] id: UBERON:0011676 name: subdivision of organism along main body axis @@ -12035,7 +11720,7 @@ xref: NCIT:C32527 xref: UMLS:C0504096 {source="ncithesaurus:Epimysium"} xref: Wikipedia:Epimysium is_a: UBERON:0011822 {source="FMA"} ! dense irregular connective tissue -relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ +relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: continuous_with UBERON:0000043 ! tendon relationship: part_of UBERON:0001134 {source="FMA"} ! skeletal muscle tissue property_value: UBPROP:0000009 "The Epimysium also protects muscles from friction against other muscles and bones" xsd:string @@ -12133,7 +11818,7 @@ property_value: UBPROP:0000001 "Cardinal body part, which consists of a maximal [Term] id: UBERON:0014892 -name: skeletal muscle organ +name: skeletal muscle organ, vertebrate namespace: uberon def: "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." [GOC:dos] synonym: "skeletal muscle" BROAD [] @@ -12164,6 +11849,7 @@ intersection_of: surrounded_by UBERON:0011899 ! epimysium intersection_of: synapsed_by CL:0000100 ! motor neuron relationship: composed_primarily_of UBERON:0001134 ! skeletal muscle tissue relationship: develops_from UBERON:0003082 ! myotome +relationship: only_in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of UBERON:0018254 ! skeletal musculature relationship: surrounded_by UBERON:0011899 ! epimysium relationship: synapsed_by CL:0000100 ! motor neuron @@ -12298,7 +11984,7 @@ xref: EHDAA2:0001842 xref: EMAPA:35578 xref: MA:0000165 is_a: UBERON:0000061 ! anatomical structure -relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ +relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: part_of UBERON:0000383 {source="MA"} ! musculature of body property_value: editor_note "Added for consistency with MA EMAPA and EHDAA2. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/104" xsd:string @@ -12830,6 +12516,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -13956,6 +13650,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects @@ -14722,7 +14429,6 @@ property_value: IAO:0000232 "The skeleton of a structure may be a true skeleton domain: UBERON:0000061 ! anatomical structure domain: UBERON:0000475 ! organism subdivision range: UBERON:0000465 {IAO:0000116="This should be to a more restricted class, but not the Uberon class may be too restricted since it is a composition-based definition of skeleton rather than functional."} ! material anatomical entity -range: UBERON:0010912 ! subdivision of skeleton is_a: has_part ! has part inverse_of: skeleton_of ! skeleton of is_asymmetric: true diff --git a/src/ontology/subsets/general_cell_types_upper_slim.owl b/src/ontology/subsets/general_cell_types_upper_slim.owl index b0c0834ec..af2ba343e 100644 --- a/src/ontology/subsets/general_cell_types_upper_slim.owl +++ b/src/ontology/subsets/general_cell_types_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4465,6 +4465,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -6382,7 +6413,6 @@ For example, A and B may be gene products and binding of B by A positively regul - Forelimb SubClassOf has_skeleton some 'Forelimb skeleton' A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision. @@ -9177,7 +9207,6 @@ For example, A and B may be gene products and binding of B by A positively regul A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. - BTO:0002606 CALOHA:TS-0415 FBbt:00005144 @@ -9185,7 +9214,6 @@ For example, A and B may be gene products and binding of B by A positively regul neuroglial cell neuroglia - Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell @@ -10251,23 +10279,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. - mesenchyme condensation cell - - - - - A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. - GOC:tfm - PMID:5025404 - - - - @@ -12413,10 +12424,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -15322,35 +15335,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -15425,32 +15409,32 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -16630,27 +16614,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -23692,13 +23655,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -23726,7 +23689,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -23875,7 +23838,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -24061,7 +24024,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -24106,7 +24069,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -24340,13 +24303,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -27653,6 +27616,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -27839,129 +27803,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - - - + + @@ -28012,11 +27859,11 @@ For example, A and B may be gene products and binding of B by A positively regul tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg - + - + @@ -28029,13 +27876,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + OG - + AEO @@ -29032,7 +28879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29068,14 +28915,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -29222,53 +29069,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - - - - - - - - - - - - uberon - UBERON:0000154 - posterior region of body - - - - @@ -29284,19 +29084,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -29369,22 +29162,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -29691,7 +29474,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29733,14 +29516,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -30566,12 +30349,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -30615,6 +30393,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -30995,7 +30783,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -31033,14 +30821,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -31093,7 +30881,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -31130,14 +30918,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -31182,7 +30970,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -31227,7 +31015,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -31240,7 +31028,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -31451,7 +31239,6 @@ For example, A and B may be gene products and binding of B by A positively regul - @@ -31546,8 +31333,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -31583,24 +31370,24 @@ For example, A and B may be gene products and binding of B by A positively regul eye - + - + - + PMID:21062451 - + PMID:21062451 @@ -31735,162 +31522,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -32216,7 +31847,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -32271,14 +31902,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -32366,7 +31997,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -32413,7 +32044,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -32427,7 +32058,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -32755,6 +32386,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -33294,7 +32926,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Skeletal element that is composed of bone tissue. @@ -33344,14 +32976,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone element - + - + VSAO-modified @@ -33462,7 +33094,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -33504,14 +33136,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -34102,7 +33734,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -34138,14 +33770,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -34208,9 +33840,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -34265,15 +33897,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -34292,19 +33924,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -34389,8 +34021,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -34436,11 +34068,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -34453,13 +34085,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -34636,12 +34268,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -34681,66 +34313,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -35095,7 +34727,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35153,14 +34785,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg - + - + FMA MA @@ -35431,14 +35063,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -35484,24 +35116,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -35967,7 +35599,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -35992,14 +35624,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -36229,9 +35861,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -36263,34 +35895,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -36355,7 +35987,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -36384,7 +36016,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -36397,7 +36029,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -36469,7 +36101,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36513,7 +36145,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -36526,7 +36158,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -36610,7 +36242,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36653,7 +36285,7 @@ For example, A and B may be gene products and binding of B by A positively regul myotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + @@ -36666,7 +36298,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2-abduced @@ -36717,134 +36349,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. - Skeletogenic portion of somites.[AAO] - The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] - part_of somite in XAO - AAO:0010571 - AEO:0000212 - BTO:0006255 - EHDAA2:0003439 - EMAPA:31159 - FMA:295652 - NCIT:C34287 - TAO:0001080 - UMLS:C0183176 - VHOG:0000680 - Wikipedia:Sclerotome - XAO:0000397 - ZFA:0001080 - sclerotomes - uberon - sclerotomus - UBERON:0003089 - - - - sclerotome - http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - - - - - - - - - - - - - - EHDAA2 - - - - - - EHDAA2 - - - - - - VHOG:0000680 - - - - - - ZFA - - - - - Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. - Wikipedia:Sclerotome - XB:curator - https://github.com/obophenotype/uberon/issues/316 - - - - - Skeletogenic portion of somites.[AAO] - 2012-06-20 - AAO:0010571 - AAO - AAO:EJS - - - - - The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] - 2012-09-17 - VHOG:0000680 - VHOG - DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000) - http://bgee.unil.ch/ - - - - - part_of somite in XAO - XAO - - - - - BTO:0006255 - https://orcid.org/0000-0003-4423-4370 - - - - - UMLS:C0183176 - ncithesaurus:Sclerotome - - - - - sclerotomes - TAO:0001080 - - - - - - sclerotomus - Wikipedia:Sclerotome - - - - - @@ -36995,7 +36499,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -37011,14 +36515,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -37346,7 +36850,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The bilaminar epithelium formed from the myotome and dermatome. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768]. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO] @@ -37369,7 +36873,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004290 dermomyotome - + @@ -37388,7 +36892,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 ZFA @@ -37714,7 +37218,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -37728,7 +37232,7 @@ For example, A and B may be gene products and binding of B by A positively regul Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue - + @@ -37741,7 +37245,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + 2012-08-14 VSAO:0000015 VSAO @@ -37780,7 +37284,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -37796,14 +37300,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -37848,7 +37352,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37887,14 +37391,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -38363,7 +37867,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -38379,14 +37883,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -38678,138 +38182,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - A delimited region of dense mesenchyme within looser mesenchyme. - AEO:0000148 - EHDAA2_RETIRED:0003148 - EHDAA:8979 - mesenchyme condensation - uberon - UBERON:0005856 - developing mesenchymal condensation - - - - - - - - - - AEO - - - - - - cjm - - - - - - AEO-modified-relation - - - - - A delimited region of dense mesenchyme within looser mesenchyme. - AEO:0000148 - - - - - mesenchyme condensation - EMAPA:25351 - - - - - - - - - - - - - - - - - - - - - - - - - - - Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. - - Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - AAO:0000963 - EMAPA:17214 - EMAPA:18043 - MA:0000308 - NCIT:C32172 - SCTID:361725000 - UMLS:C0222645 - VSAO:0000056 - Wikipedia:Axial_skeleton - XAO:0004011 - uberon - skeleton axiale - UBERON:0005944 - - - - axial skeleton plus cranial skeleton - http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg - - - - - Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. - FMA:71221 - VSAO:0000056 - Wikipedia:Axial_skeleton - https://github.com/obophenotype/uberon/issues/44 - https://github.com/obophenotype/uberon/wiki/The-axial-skeleton - - - - - Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - 2012-08-14 - VSAO:0000056 - VSAO - PSPUB:0000170 - - - - - UMLS:C0222645 - ncithesaurus:Axial_Skeleton - - - - - skeleton axiale - Wikipedia:Axial_skeleton - - - - - @@ -38817,7 +38189,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -38832,7 +38204,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -38845,7 +38217,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -38882,7 +38254,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -38899,14 +38271,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -38924,41 +38296,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -39363,7 +38700,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -39378,14 +38715,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -39475,7 +38812,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39492,14 +38829,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -39598,7 +38935,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39624,7 +38961,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -39640,7 +38977,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -39689,7 +39026,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -39697,7 +39034,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -39710,7 +39047,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -39722,137 +39059,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - Mesenchymal cells that are migrating. - this class will be an important part of the NC reorganization - AEO:0000152 - EHDAA2:0003152 - uberon - UBERON:0007530 - migrating mesenchyme population - - - - - Mesenchymal cells that are migrating. - AEO:JB - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -40020,7 +39226,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40037,14 +39243,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -40066,7 +39272,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -40074,14 +39280,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -40237,82 +39443,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. - Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] - FMA:23879 - SCTID:129140006 - VSAO:0000042 - skeletal subdivision - uberon - subdivision of skeleton (in vivo) - UBERON:0010912 - - subdivision of skeleton - - - - - - - - - - - - - - cjm - - - - - - UBERONREF:0000003 - - - - - - VSAO - - - - - Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. - UBERONREF:0000003 - https://orcid.org/0000-0002-6601-2165 - - - - - Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] - 2012-08-14 - VSAO:0000042 - incorrect - VSAO - VSAO:curator - - - - - skeletal subdivision - VSAO:0000042 - - - - - subdivision of skeleton (in vivo) - FMA:23879 - - - - @@ -40323,12 +39453,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -40389,36 +39513,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). - consider obsoleting, coordinate with VSAO - VSAO:0000006 - XAO:0004021 - uberon - UBERON:0011585 - cell condensation - - - - - - VSAO - - - - - Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). - GO_REF:0000034 - PSPUB:0000170 - VSAO:0000006 - http://dx.plos.org/10.1371/journal.pone.0051070 - - - - @@ -40649,7 +39743,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40674,7 +39768,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0011899 epimysium - + @@ -40687,7 +39781,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -40793,7 +39887,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40815,7 +39909,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0012429 hematopoietic tissue - + @@ -40828,7 +39922,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + defitional @@ -41077,6 +40171,12 @@ For example, A and B may be gene products and binding of B by A positively regul + + + + + + @@ -41118,7 +40218,7 @@ For example, A and B may be gene products and binding of B by A positively regul ZFA:0005277 uberon UBERON:0014892 - skeletal muscle organ + skeletal muscle organ, vertebrate @@ -41398,7 +40498,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41421,7 +40521,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0016887 entire extraembryonic component - + @@ -41434,7 +40534,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -41520,7 +40620,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41536,14 +40636,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal musculature - + - + MA diff --git a/src/ontology/subsets/general_cell_types_upper_slim.tsv b/src/ontology/subsets/general_cell_types_upper_slim.tsv index 50a35634b..75c36b0e2 100644 --- 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+_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid891 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid903 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid918 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid925 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid931 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid941 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid951 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid977 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid993 "continuant" "occurrent" "independent continuant" @@ -337,7 +335,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "stuff accumulating cell" "extracellular matrix secreting cell" "migratory neural crest cell" - "mesenchyme condensation cell" "extraembryonic cell" "epiblast cell" "multi-potent skeletal muscle stem cell" @@ -456,7 +453,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "muscle system process" "circulatory system process" "heart process" - "respiratory system process" "cellular_component" "extracellular region" "collagen trimer" @@ -493,7 +489,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "sensory perception" "visual perception" @@ -840,7 +835,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "processual entity" "sense organ" "tube" - "head" "tendon" "duct" "anatomical wall" @@ -861,8 +855,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "gastrula stage" "neurula stage" "organogenesis stage" - "anterior region of body" - "posterior region of body" "mouth" "blastula" "musculature of body" @@ -890,7 +882,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "endocrine system" "eye" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" @@ -934,7 +925,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "paraxial mesoderm" "lateral plate mesoderm" "myotome" - "sclerotome" "compound organ" "mesenchyme" "intraembryonic coelom" @@ -965,11 +955,8 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "developing anatomical structure" "acellular membrane" "basement membrane of epithelium" - "developing mesenchymal condensation" - "axial skeleton plus cranial skeleton" "notochordal plate" "notochordal process" - "pharynx" "presumptive endoderm" "presumptive structure" "presumptive ectoderm" @@ -984,8 +971,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "presumptive paraxial mesoderm" "epithelial vesicle" "dense mesenchyme tissue" - "migrating mesenchyme population" - "craniocervical region" "regular connective tissue" "dense regular connective tissue" "entire embryonic mesenchyme" @@ -994,10 +979,8 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "bona-fide anatomical boundary" "germ layer / neural crest" "ecto-epithelium" - "subdivision of skeleton" "axial skeletal system" "organ system subdivision" - "cell condensation" "subdivision of organism along main body axis" "irregular connective tissue" "dense irregular connective tissue" @@ -1010,7 +993,7 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "anatomical conduit space" "main body axis" "body proper" - "skeletal muscle organ" + "skeletal muscle organ, vertebrate" "non-connected functional system" "glandular system" "lateral structure" diff --git a/src/ontology/subsets/kidney_upper_slim.json b/src/ontology/subsets/kidney_upper_slim.json index 4ac3f393d..f1316cf80 100644 --- a/src/ontology/subsets/kidney_upper_slim.json +++ b/src/ontology/subsets/kidney_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/kidney_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/kidney_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -2223,6 +2223,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2233,6 +2234,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -3956,28 +3961,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0003044", "lbl" : "regulation of systemic arterial blood pressure mediated by a chemical signal", @@ -5509,28 +5492,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -11626,11 +11587,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11655,7 +11616,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11807,7 +11768,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11995,7 +11956,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -12040,7 +12001,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -12278,11 +12239,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -17092,6 +17053,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -20660,6 +20663,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -20785,102 +20791,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000055", "lbl" : "vessel", @@ -22447,16 +22357,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", "lbl" : "posterior region of body", @@ -25645,116 +25545,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -26679,6 +26469,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -36388,47 +36180,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "lbl" : "pharynx", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The pharynx is the part of the digestive system immediately posterior to the mouth[GO].", - "xrefs" : [ "GO:0060465" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#grouping_class", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "anterior part of foregut" - }, { - "pred" : "hasRelatedSynonym", - "val" : "pharyngeal tube" - } ], - "xrefs" : [ { - "val" : "MAT:0000049" - }, { - "val" : "MESH:D010614" - }, { - "val" : "MIAA:0000049" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/IAO_0000232", - "val" : "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." - }, { - "pred" : "http://purl.obolibrary.org/obo/IAO_0006012", - "val" : "2023-04-20" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "branchial" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "pharyngeal" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0006595", "lbl" : "presumptive endoderm", @@ -37286,60 +37037,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "lbl" : "craniocervical region", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae.", - "xrefs" : [ "https://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#pheno_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic part of animal", - "xrefs" : [ "Wikipedia:Head" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic region", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head and neck", - "xrefs" : [ "FMA:280881" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head or neck" - } ], - "xrefs" : [ { - "val" : "CALOHA:TS-2356" - }, { - "val" : "EV:0100009" - }, { - "val" : "FMA:280881" - }, { - "val" : "MA:0000006" - }, { - "val" : "NCIT:C12418" - }, { - "val" : "SCTID:361355005" - }, { - "val" : "UMLS:C0460004" - }, { - "val" : "WikipediaCategory:Head_and_neck" - }, { - "val" : "galen:HeadAndNeck" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0007823", "lbl" : "appendage girdle region", @@ -39331,8 +39028,6 @@ "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy" ], "xrefs" : [ { "val" : "AAO:0010270" - }, { - "val" : "AEO:0000154" }, { "val" : "ZFA:0005594" } ], @@ -42175,14 +41870,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003014", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0003044", "pred" : "is_a", @@ -42685,10 +42372,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0007498", "pred" : "http://purl.obolibrary.org/obo/RO_0002296", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000926" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0007585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0032501" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0007586", "pred" : "is_a", @@ -45061,18 +44744,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000026", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011676" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007811" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000055", "pred" : "is_a", @@ -45639,18 +45310,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000119", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000957" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/BSPO_0000096", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000154" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", "pred" : "is_a", @@ -45767,24 +45426,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -46058,7 +45703,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -46365,26 +46016,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000991", "pred" : "http://purl.obolibrary.org/obo/RO_0002202", "obj" : "http://purl.obolibrary.org/obo/UBERON_0005564" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -47182,7 +46813,7 @@ } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001552", - "pred" : "http://purl.obolibrary.org/obo/RO_0002380", + "pred" : "http://purl.obolibrary.org/obo/RO_0002252", "obj" : "http://purl.obolibrary.org/obo/UBERON_0009885" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001555", @@ -49182,7 +48813,7 @@ } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0004639", - "pred" : "http://purl.obolibrary.org/obo/RO_0002380", + "pred" : "http://purl.obolibrary.org/obo/RO_0002252", "obj" : "http://purl.obolibrary.org/obo/UBERON_0004723" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0004639", @@ -50073,14 +49704,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0006555", "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001008" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004921" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006595", "pred" : "is_a", @@ -50499,32 +50122,6 @@ "val" : "MA" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0007823", "pred" : "is_a", @@ -51009,10 +50606,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -51961,6 +51554,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -52917,6 +52522,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -54986,13 +54595,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/BFO_0000051", "fillerId" : "http://purl.obolibrary.org/obo/CL_0000586" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/src/ontology/subsets/kidney_upper_slim.obo b/src/ontology/subsets/kidney_upper_slim.obo index 0297d6c99..b7ccbe436 100644 --- a/src/ontology/subsets/kidney_upper_slim.obo +++ b/src/ontology/subsets/kidney_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/kidney_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/kidney_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/kidney_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -1202,6 +1202,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1211,6 +1212,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000988 @@ -2291,17 +2293,6 @@ synonym: "excretory system process" EXACT [] synonym: "kidney system process" RELATED [] is_a: GO:0003008 ! system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0003044 name: regulation of systemic arterial blood pressure mediated by a chemical signal @@ -3194,16 +3185,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -6237,8 +6218,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -6250,7 +6231,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -6319,7 +6300,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -6395,7 +6376,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -6412,7 +6393,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -6515,8 +6496,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7571,6 +7552,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7629,54 +7611,6 @@ property_value: UBPROP:0000001 "Organ or organ part that is attached to the body property_value: UBPROP:0000007 "appendicular" xsd:string property_value: UBPROP:0000008 "this is currently a subtype of organism subdivision - which would exclude feathers" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000055 name: vessel @@ -8457,15 +8391,6 @@ xref: NCIT:C66831 is_a: UBERON:0000957 ! lamina property_value: editor_note "consider adding to caro" xsd:string -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000154 name: posterior region of body @@ -8637,8 +8562,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -9313,7 +9236,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -9964,7 +9887,6 @@ xref: ZFA:0000632 is_a: UBERON:0000467 ! anatomical system intersection_of: UBERON:0000467 ! anatomical system intersection_of: capable_of_part_of GO:0000003 ! reproduction -disjoint_from: UBERON:0001004 ! respiratory system disjoint_from: UBERON:0001007 ! digestive system disjoint_from: UBERON:0001009 ! circulatory system disjoint_from: UBERON:0001016 ! nervous system @@ -10026,69 +9948,6 @@ property_value: UBPROP:0000003 "Examination of different vertebrate species show property_value: UBPROP:0000007 "gonadal" xsd:string property_value: UBPROP:0000012 "FMA xref is a 'general anatomical term'" xsd:string {external_ontology="FMA"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:8450002 ! excretory system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -10563,6 +10422,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -11364,7 +11224,7 @@ xref: MA:0002583 xref: Wikipedia:Arcuate_arteries_of_the_kidney is_a: UBERON:0001637 ! artery is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0009885 ! interlobar artery +relationship: connecting_branch_of UBERON:0009885 ! interlobar artery relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney relationship: present_in_taxon NCBITaxon:9606 property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg" xsd:anyURI @@ -14288,8 +14148,8 @@ xref: ZFA:0005307 is_a: UBERON:0001637 ! artery is_a: UBERON:0001980 ! arteriole is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0004723 ! interlobular artery relationship: capable_of GO:0003093 {source="Wikipedia"} ! regulation of glomerular filtration +relationship: connecting_branch_of UBERON:0004723 ! interlobular artery relationship: contributes_to_morphology_of UBERON:0001229 ! renal corpuscle relationship: part_of UBERON:0001229 ! renal corpuscle relationship: present_in_taxon NCBITaxon:9606 @@ -15454,25 +15314,6 @@ intersection_of: UBERON:0000025 ! tube intersection_of: part_of UBERON:0001008 ! renal system relationship: part_of UBERON:0001008 ! renal system -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -15949,32 +15790,6 @@ property_value: editor_note "consider merging with vasculature" xsd:string property_value: UBPROP:0000001 "The cardiovascular and lymphatic systems, collectively[ncithesaurus:Vascular_System]." xsd:string {source="ncithesaurus:Vascular_System"} property_value: UBPROP:0000012 "in both MA and BTO, the arterial system and venous sytem are subtypes of the vascular system" xsd:string {external_ontology="MA"} -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0007823 name: appendage girdle region @@ -16456,7 +16271,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -17003,7 +16817,6 @@ namespace: uberon def: "Material anatomical entity that forms the outermost boundary of an anatomical structure." [https://github.com/obophenotype/uberon/issues/1324] subset: common_anatomy xref: AAO:0010270 -xref: AEO:0000154 xref: ZFA:0005594 is_a: UBERON:0000465 ! material anatomical entity relationship: bounding_layer_of UBERON:0000061 ! anatomical structure @@ -17490,6 +17303,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -18615,6 +18436,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/src/ontology/subsets/kidney_upper_slim.owl b/src/ontology/subsets/kidney_upper_slim.owl index 910784e47..a5d1fc86e 100644 --- a/src/ontology/subsets/kidney_upper_slim.owl +++ b/src/ontology/subsets/kidney_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4478,6 +4478,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -11363,10 +11394,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -14495,35 +14528,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -14863,32 +14867,32 @@ For example, A and B may be gene products and binding of B by A positively regul + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -16677,27 +16681,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -24999,13 +24982,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -25033,7 +25016,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -25182,7 +25165,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -25368,7 +25351,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -25413,7 +25396,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -25647,13 +25630,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -28137,6 +28120,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -28294,123 +28278,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - @@ -28458,7 +28325,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -28518,14 +28385,14 @@ For example, A and B may be gene products and binding of B by A positively regul ureter https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + GO @@ -28597,8 +28464,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -28648,25 +28515,25 @@ For example, A and B may be gene products and binding of B by A positively regul urethra https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png - + - + - + pelvic part of UG sinus gives rise to prostatic and membranous parts of urethra Wikipedia - + Wikipedia @@ -29213,7 +29080,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29264,14 +29131,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + FMA MA @@ -29568,15 +29435,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + @@ -29612,34 +29479,34 @@ For example, A and B may be gene products and binding of B by A positively regul metanephros - + - + - + - + definitional - + GO - + ISBN:9780878932504 @@ -29796,8 +29663,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + An epithelial swelling on the Wolffian duct that elongates to invade the adjacent metanephric mesenchyme[MP]. Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts. [Embryology, See_Dudek_RW_and_Fix_JD, Third_Edition_(2004)_Philadelphia:_Lippincott_William_and_Wilkins, p.137][VHOG] Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts[VHOG:0000541]. @@ -29824,11 +29691,11 @@ For example, A and B may be gene products and binding of B by A positively regul ureteric bud - + - + @@ -29841,13 +29708,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 - + ISBN:9780878932504 @@ -30280,7 +30147,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -30316,14 +30183,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -30501,36 +30368,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - @@ -30631,8 +30468,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -30665,24 +30502,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0000162 cloaca - + - + - + ZFA - + AAO @@ -30764,8 +30601,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -30784,24 +30621,24 @@ For example, A and B may be gene products and binding of B by A positively regul embryonic cloaca - + - + - + EHDAA2 - + EHDAA2 @@ -30824,7 +30661,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -30866,14 +30703,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive urogenital sinus http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + - + MP-def @@ -30957,19 +30794,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -31042,22 +30872,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -31246,15 +31066,15 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -31296,34 +31116,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -31863,7 +31683,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -31905,14 +31725,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -32700,12 +32520,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -32749,6 +32564,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -33129,7 +32954,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -33166,14 +32991,14 @@ For example, A and B may be gene products and binding of B by A positively regul abdomen - + - + MA @@ -33416,7 +33241,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -33454,14 +33279,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -33514,7 +33339,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -33551,14 +33376,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -33603,7 +33428,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -33648,7 +33473,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -33661,7 +33486,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -33860,7 +33685,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -33906,7 +33731,7 @@ For example, A and B may be gene products and binding of B by A positively regul proctodeum https://github.com/obophenotype/uberon/issues/685 - + @@ -33919,7 +33744,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -33993,7 +33818,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -34070,14 +33895,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -34384,7 +34209,6 @@ For example, A and B may be gene products and binding of B by A positively regul - @@ -34642,160 +34466,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -35280,7 +34950,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35333,14 +35003,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -35428,7 +35098,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -35475,7 +35145,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -35489,7 +35159,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -35745,7 +35415,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35782,14 +35452,14 @@ For example, A and B may be gene products and binding of B by A positively regul hindgut http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png - + - + Wikipedia @@ -36030,6 +35700,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -36363,14 +36034,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -36422,24 +36093,24 @@ For example, A and B may be gene products and binding of B by A positively regul renal pelvis https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg - + - + - + MA - + FMA @@ -36485,7 +36156,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36522,14 +36193,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg - + - + FMA @@ -36565,7 +36236,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36613,14 +36284,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal corpuscle https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + MA ZFA @@ -36721,7 +36392,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36766,14 +36437,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular capsule http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg - + - + Wikipedia @@ -36872,11 +36543,11 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + @@ -36915,7 +36586,7 @@ For example, A and B may be gene products and binding of B by A positively regul nephron tubule - + @@ -36924,18 +36595,18 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + - + GO MA ZFA @@ -36949,13 +36620,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + checkme @@ -36996,7 +36667,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37044,14 +36715,14 @@ For example, A and B may be gene products and binding of B by A positively regul collecting duct of renal tubule - + - + checkme GO @@ -37211,8 +36882,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP]. @@ -37259,11 +36930,11 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + @@ -37276,13 +36947,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA - + upper part of UG sinus @@ -37465,15 +37136,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + The basic functional unit of the kidney. its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine. A nephron eliminates wastes from the body, regulates blood volume and blood pressure, controls levels of electrolytes and metabolites, and regulates blood pH. Its functions are vital to life and are regulated by the endocrine system by hormones such as antidiuretic hormone, aldosterone, and parathyroid hormone.[WP]. kidney terms require review for cross-vertebrate compatibility and developmental relationships. @@ -37506,34 +37177,34 @@ For example, A and B may be gene products and binding of B by A positively regul nephron http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + - + FMA - + definitional - + Bgee:AN @@ -37593,15 +37264,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + @@ -37638,15 +37309,15 @@ For example, A and B may be gene products and binding of B by A positively regul proximal convoluted tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + @@ -37659,20 +37330,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + MA uses subclass GOC:mtg_kidney_jan10 - + GO - + Wikipedia @@ -37838,7 +37509,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37865,7 +37536,7 @@ For example, A and B may be gene products and binding of B by A positively regul descending limb of loop of Henle http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + @@ -37878,7 +37549,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -37902,9 +37573,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -37944,15 +37615,15 @@ For example, A and B may be gene products and binding of B by A positively regul proximal straight tubule - + - + - + @@ -37965,20 +37636,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + MA - + MA uses subclass GOC:mtg_kidney_jan10 - + MA @@ -38029,7 +37700,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -38067,7 +37738,7 @@ For example, A and B may be gene products and binding of B by A positively regul distal convoluted tubule https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png - + @@ -38080,7 +37751,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EMAPA GO MA-modified-from-isa @@ -38208,7 +37879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The anus and surrounding regions. Encompasses both internal and external regions, where present. Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG] EFO:0000847 @@ -38234,14 +37905,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/507 http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png - + - + cjm @@ -38428,10 +38099,10 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -38451,14 +38122,14 @@ For example, A and B may be gene products and binding of B by A positively regul kidney arcuate artery https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg - + - + MA @@ -38499,7 +38170,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -38541,14 +38212,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -39318,8 +38989,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -39332,7 +39003,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39391,34 +39062,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -40554,7 +40225,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40567,7 +40238,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40616,24 +40287,24 @@ For example, A and B may be gene products and binding of B by A positively regul kidney - + - + - + FMA - + definitional @@ -40674,8 +40345,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -40719,11 +40390,11 @@ For example, A and B may be gene products and binding of B by A positively regul Once the more complex mesonephros forms the pronephros undergoes apoptosis in amphibians. In fishes the nephron degenerates but the organ remains and becomes a component of the immune system[Wikipedia:Pronephros]. // TODO - check developmental relationships. Note that we previously include the ZFA/XAO terms under the more specific 'pronephric kidney', but these are now merged. TODO GCI: relationship: capable_of GO:0030104 pronephros - + - + @@ -40736,13 +40407,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + OG - + ZFA @@ -40964,7 +40635,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40998,14 +40669,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -41135,7 +40806,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41154,7 +40825,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate[GO]. a microscopic structure in the kidney, which regulates the function of each nephron. The juxtaglomerular apparatus is named for its proximity to the glomerulus: it is found between the vascular pole of the renal corpuscle and the returning distal convoluted tubule of the same nephron. This location is critical to its function in regulating renal blood flow and glomerular filtration rate. The three cellular components of the apparatus are the macula densa, extraglomerular mesangial cells, and juxtaglomerular cells (also known as granular cells)[WP]. BTO:0005157 @@ -41176,24 +40847,24 @@ For example, A and B may be gene products and binding of B by A positively regul juxtaglomerular apparatus - + - + - + MA - + GO @@ -41324,8 +40995,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -41342,24 +41013,24 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check MA part_ofs - should be spatially disjoint from renal glomerulus? extraglomerular mesangium - + - + - + MA - + MA @@ -41376,7 +41047,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41417,14 +41088,14 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -41532,9 +41203,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -41589,15 +41260,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -41616,19 +41287,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -41713,8 +41384,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -41760,11 +41431,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -41777,13 +41448,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -41895,8 +41566,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus[GO]. not part of a nephron or distal tubule in MA and FMA @@ -41915,24 +41586,24 @@ For example, A and B may be gene products and binding of B by A positively regul macula densa - + - + - + MA - + GO @@ -41962,12 +41633,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -42007,66 +41678,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -42535,14 +42206,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -42587,24 +42258,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -42858,7 +42529,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -42883,14 +42554,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -42950,8 +42621,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]. Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO] The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-3, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG] @@ -42975,11 +42646,11 @@ For example, A and B may be gene products and binding of B by A positively regul The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney[GOC:mtg_kidney_jan10, PMID:15647339, XAO:0000063, ZFA:0000150] pronephric duct - + - + @@ -42992,13 +42663,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + Wikipedia - + XAO @@ -43185,9 +42856,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -43229,34 +42900,34 @@ For example, A and B may be gene products and binding of B by A positively regul intermediate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + - + AAO - + EMAPA - + XAO @@ -43401,7 +43072,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Paired organ that connects the primitive kidney Wolffian body (or mesonephros) to the cloaca and serves as the anlage for certain male reproductive organs. the Wolffian duct is what remains of the pronephric duct after the atrophy of the pronephros[WP]. In Zebrafish: Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber[ZFA]. Consider adding subclasses for male and female specific variants TODO - mesonephric portion of the nephric duct @@ -43437,7 +43108,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesonephric duct http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + @@ -43450,7 +43121,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -43538,9 +43209,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -43572,34 +43243,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -43664,7 +43335,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -43693,7 +43364,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43706,7 +43377,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -43778,7 +43449,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43822,7 +43493,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43835,7 +43506,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -43919,15 +43590,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -43947,15 +43618,15 @@ For example, A and B may be gene products and binding of B by A positively regul heart primordium - + - + - + @@ -43968,19 +43639,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + ZFA - + XAO @@ -44035,8 +43706,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -44064,11 +43735,11 @@ For example, A and B may be gene products and binding of B by A positively regul sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -44087,13 +43758,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + VHOG:0000680 - + ZFA @@ -44399,7 +44070,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -44427,14 +44098,14 @@ For example, A and B may be gene products and binding of B by A positively regul Genes: The positional specification of the metanephrogenic mesenchyme is negatively regulated by Foxc1 and Foxc2. Next the permanent kidney forming metanephrogenic mesenchyme is specified by Hox11 genes. The competence to respond to ureteric bud inducers is regulated by WT1. GDNF secretion restricted to posterior region by Robo2 and Sprouty1. The receptors for GDNF are synthesized in the nephric ducts and later in ureteric buds [ISBN:9780878932504 "Developmental Biology"] metanephric mesenchyme - + - + ISBN:9780878932504 @@ -45150,7 +44821,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -45166,14 +44837,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -45800,8 +45471,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the loop of Henle. It has a brush border epithelial morphology[GO]. TODO - ensure definition works across species. @@ -45818,24 +45489,24 @@ For example, A and B may be gene products and binding of B by A positively regul proximal tubule - + - + - + GO - + GO @@ -45895,7 +45566,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The intermediate tubule is a nephron tubule that lies between the proximal and distal tubules. TODO - check for applicability across species FMA:17718 @@ -45905,14 +45576,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004136 intermediate tubule - + - + FMA @@ -45998,8 +45669,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46012,24 +45683,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -46088,7 +45759,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -46108,14 +45779,14 @@ For example, A and B may be gene products and binding of B by A positively regul heart tube - + - + ZFA-modified @@ -46341,8 +46012,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron. EMAPA:27681 ZFA:0005588 @@ -46352,24 +46023,24 @@ For example, A and B may be gene products and binding of B by A positively regul comma-shaped body - + - + - + cjm - + ZFA @@ -46391,8 +46062,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron. TODO EMAPA:27756 @@ -46404,24 +46075,24 @@ For example, A and B may be gene products and binding of B by A positively regul S-shaped body - + - + - + cjm - + GO @@ -46841,7 +46512,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -46880,14 +46551,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular capillary - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -47517,10 +47188,10 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -47554,14 +47225,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal afferent arteriole http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -47922,7 +47593,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -47938,14 +47609,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -47990,7 +47661,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -48029,14 +47700,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -48352,7 +48023,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -48375,14 +48046,14 @@ For example, A and B may be gene products and binding of B by A positively regul somatopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png - + - + EHDAA2 @@ -48448,9 +48119,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -48471,34 +48142,34 @@ For example, A and B may be gene products and binding of B by A positively regul urogenital fold - + - + - + - + EHDAA2 - + Wikipedia - + EHDAA2 @@ -49001,7 +48672,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + . class added for consistency with GO - consider merging with kidney mesenchyme. uberon @@ -49009,14 +48680,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005095 kidney rudiment - + - + GO @@ -49132,7 +48803,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct[GO]. BTO:0004539 @@ -49150,14 +48821,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal connecting tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -49890,7 +49561,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -49906,14 +49577,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -50024,7 +49695,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -50043,14 +49714,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive heart tube - + - + ZFA @@ -50084,7 +49755,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50113,7 +49784,7 @@ For example, A and B may be gene products and binding of B by A positively regul gonad primordium - + @@ -50126,7 +49797,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA @@ -50193,14 +49864,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + A mesoderm that has the potential to develop into a pronephros. Portion of tissue that consists of the mesenchymal precursor to the pronephric kidney and that begins to separate from the intermediate mesoderm at NF stage 21 and epithelializes by NF stage 30.[AAO] AAO:0011090 @@ -50219,24 +49890,24 @@ For example, A and B may be gene products and binding of B by A positively regul the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 "Developmental Biology", PMID:10720431 "Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm"]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney pronephric mesoderm - + - + - + ZFA - + Bgee:AN @@ -50292,7 +49963,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50311,14 +49982,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular tuft - + - + Wikipedia @@ -50575,7 +50246,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50605,14 +50276,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular basement membrane http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -50706,7 +50377,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -50716,7 +50387,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005856 developing mesenchymal condensation - + @@ -50735,7 +50406,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO-modified-relation @@ -50843,7 +50514,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50884,14 +50555,14 @@ For example, A and B may be gene products and binding of B by A positively regul cloacal membrane http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png - + - + Wikipedia @@ -50944,7 +50615,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -50959,7 +50630,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -50972,7 +50643,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -51009,7 +50680,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -51026,14 +50697,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -51306,41 +50977,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -51619,7 +51255,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A region of nephron tubule that is part of a cortex of kidney. EMAPA:18976 MA:0002609 @@ -51629,14 +51265,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0006853 renal cortex tubule - + - + MA @@ -52121,7 +51757,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -52136,14 +51772,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -52233,7 +51869,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -52250,14 +51886,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -52356,7 +51992,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -52382,7 +52018,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -52398,7 +52034,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -52559,7 +52195,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -52567,7 +52203,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -52580,7 +52216,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -52795,7 +52431,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -52814,14 +52450,14 @@ For example, A and B may be gene products and binding of B by A positively regul vascular system - + - + MA @@ -52851,99 +52487,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -53074,7 +52617,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53117,14 +52660,14 @@ For example, A and B may be gene products and binding of B by A positively regul pelvic girdle skeleton http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png - + - + PMID:21455939 @@ -53220,7 +52763,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The functional tissue of the kidney, consisting of the nephrons. BTO:0003604 FMA:15574 @@ -53231,7 +52774,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0008987 renal parenchyma - + @@ -53244,7 +52787,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -53314,7 +52857,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53331,14 +52874,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -53457,7 +53000,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -53465,14 +53008,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -53571,7 +53114,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -53581,14 +53124,14 @@ For example, A and B may be gene products and binding of B by A positively regul anterior lateral plate mesoderm - + - + ZFA @@ -53917,7 +53460,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53935,14 +53478,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010227 future cardiac atrium - + - + ZFA @@ -54085,7 +53628,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54099,7 +53642,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010377 mesenchyme from somatopleure - + @@ -54112,7 +53655,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -54128,7 +53671,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 @@ -54138,14 +53681,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010523 microcirculatory vessel - + - + ZFA @@ -54178,7 +53721,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54195,7 +53738,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010532 primitive nephron - + @@ -54208,7 +53751,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -54230,7 +53773,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54241,7 +53784,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010536 nephron progenitor - + @@ -54254,7 +53797,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -54576,8 +54119,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -54590,11 +54133,11 @@ For example, A and B may be gene products and binding of B by A positively regul subdivision of skeleton - + - + @@ -54607,13 +54150,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + UBERONREF:0000003 - + VSAO @@ -54658,12 +54201,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -54690,7 +54227,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -54700,7 +54237,7 @@ For example, A and B may be gene products and binding of B by A positively regul postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -54713,7 +54250,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -54737,7 +54274,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54750,7 +54287,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of urinary system which consists of the kidney and the ureters. FMA:45658 @@ -54763,24 +54300,24 @@ For example, A and B may be gene products and binding of B by A positively regul upper urinary tract - + - + - + FMA - + FMA-abduced-lr @@ -55102,7 +54639,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55117,14 +54654,14 @@ For example, A and B may be gene products and binding of B by A positively regul We presume this is distinct from AAO:0001003, an external integumentary structure - check with amphibian anatomy ontology developers. AO notes: the text def states mesenchymal swelling, EHDAA2 splits into mesenchymal and epithelial parts embryonic cloacal fold - + - + EHDAA2 @@ -55147,20 +54684,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0004588 uberon UBERON:0012361 internal anal region - + - + EHDAA2 @@ -55170,20 +54707,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0004589 uberon UBERON:0012469 external anal region - + - + EHDAA2 @@ -55210,7 +54747,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55230,14 +54767,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeleton of pelvic complex - + - + FMA @@ -55289,7 +54826,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The precursor of the urethra. In humans, the urethral groove is a temporary linear indentation on the underside (ventral side) of the male penis during embryonic development. It typically appears around 8 weeks of gestation and becomes closed into a normal male urethra by the 12th week SCTID:361531004 @@ -55301,14 +54838,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0013241 embryonic urethral groove - + - + Wikipedia @@ -55921,7 +55458,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55944,7 +55481,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0016887 entire extraembryonic component - + @@ -55957,7 +55494,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -56359,7 +55896,6 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010270 - AEO:0000154 ZFA:0005594 uberon UBERON:0036215 @@ -56379,7 +55915,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The upper tract of the renal system. The renal pelvis is the large cavity in the middle of each kidney. Urine drains from each kidney through a long tube called the ureter, into the bladder, where it is stored until it is passed from the body through the urethra. NCIT:C54419 renal pelvis and ureter @@ -56388,14 +55924,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0036295 renal pelvis/ureter - + - + NCIT diff --git a/src/ontology/subsets/kidney_upper_slim.tsv b/src/ontology/subsets/kidney_upper_slim.tsv index e1575380b..0fcb14222 100644 --- a/src/ontology/subsets/kidney_upper_slim.tsv +++ b/src/ontology/subsets/kidney_upper_slim.tsv @@ -1,377 +1,376 @@ ?x ?label -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1003 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1014 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1024 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1030 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1036 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1042 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1048 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1054 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1060 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+_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid970 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid976 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid983 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid989 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid996 "continuant" "occurrent" "independent continuant" @@ -542,7 +541,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "muscle system process" "circulatory system process" "renal system process" - "respiratory system process" "regulation of systemic arterial blood pressure mediated by a chemical signal" "renal system process involved in regulation of systemic arterial blood pressure" "regulation of systemic arterial blood pressure" @@ -601,7 +599,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "excretion" "blood circulation" @@ -950,7 +947,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "processual entity" "tube" "appendage" - "head" "vessel" "ureter" "urethra" @@ -979,7 +975,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "neurula stage" "organogenesis stage" "cell layer" - "anterior region of body" "posterior region of body" "membranous layer" "orifice" @@ -1026,7 +1021,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "skeletal joint" "reproductive system" "gonad" - "respiratory system" "digestive system" "renal system" "circulatory system" @@ -1229,7 +1223,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "kidney vasculature" "renal duct" "excretory tube" - "pharynx" "presumptive endoderm" "presumptive blood" "presumptive structure" @@ -1260,7 +1253,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "kidney field" "anlage" "vascular system" - "craniocervical region" "appendage girdle region" "pelvic girdle skeleton" "renal parenchyma" diff --git a/subsets/blood_and_immune_upper_slim.json b/subsets/blood_and_immune_upper_slim.json index aeaef2a56..a642004a5 100644 --- a/subsets/blood_and_immune_upper_slim.json +++ b/subsets/blood_and_immune_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/blood_and_immune_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/blood_and_immune_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -3231,6 +3231,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -3241,6 +3242,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -6190,28 +6195,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0003674", "lbl" : "molecular_function", @@ -7903,28 +7886,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -15299,11 +15260,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -15328,7 +15289,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -15480,7 +15441,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -15668,7 +15629,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -15713,7 +15674,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -15951,11 +15912,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -22861,6 +22822,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -26429,6 +26432,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -26473,102 +26479,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000055", "lbl" : "vessel", @@ -27443,26 +27353,6 @@ "val" : "https://github.com/obophenotype/uberon/issues/533" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "lbl" : "posterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000165", "lbl" : "mouth", @@ -29623,116 +29513,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -30329,6 +30109,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -34802,47 +34584,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "lbl" : "pharynx", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The pharynx is the part of the digestive system immediately posterior to the mouth[GO].", - "xrefs" : [ "GO:0060465" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#grouping_class", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "anterior part of foregut" - }, { - "pred" : "hasRelatedSynonym", - "val" : "pharyngeal tube" - } ], - "xrefs" : [ { - "val" : "MAT:0000049" - }, { - "val" : "MESH:D010614" - }, { - "val" : "MIAA:0000049" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/IAO_0000232", - "val" : "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." - }, { - "pred" : "http://purl.obolibrary.org/obo/IAO_0006012", - "val" : "2023-04-20" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "branchial" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "pharyngeal" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0006595", "lbl" : "presumptive endoderm", @@ -35505,60 +35246,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "lbl" : "craniocervical region", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae.", - "xrefs" : [ "https://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#pheno_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic part of animal", - "xrefs" : [ "Wikipedia:Head" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic region", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head and neck", - "xrefs" : [ "FMA:280881" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head or neck" - } ], - "xrefs" : [ { - "val" : "CALOHA:TS-2356" - }, { - "val" : "EV:0100009" - }, { - "val" : "FMA:280881" - }, { - "val" : "MA:0000006" - }, { - "val" : "NCIT:C12418" - }, { - "val" : "SCTID:361355005" - }, { - "val" : "UMLS:C0460004" - }, { - "val" : "WikipediaCategory:Head_and_neck" - }, { - "val" : "galen:HeadAndNeck" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0009142", "lbl" : "entire embryonic mesenchyme", @@ -40866,14 +40553,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003013", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0003674", "pred" : "is_a", @@ -41360,10 +41039,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0007498", "pred" : "http://purl.obolibrary.org/obo/RO_0002296", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000926" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0007585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0032501" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0007586", "pred" : "is_a", @@ -44412,18 +44087,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000025", "pred" : "http://purl.obolibrary.org/obo/RO_0000086", "obj" : "http://purl.obolibrary.org/obo/PATO_0002299" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011676" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007811" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000055", "pred" : "is_a", @@ -44716,26 +44379,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000111", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/BSPO_0000096", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000154" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "is_a", @@ -44746,24 +44389,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -44989,7 +44618,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -45174,26 +44809,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000982", "pred" : "http://purl.obolibrary.org/obo/RO_0002433", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001434" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -46942,14 +46557,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0006314", "pred" : "http://purl.obolibrary.org/obo/RO_0000086", "obj" : "http://purl.obolibrary.org/obo/PATO_0001548" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004921" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006595", "pred" : "is_a", @@ -47268,32 +46875,6 @@ "val" : "MA" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0009142", "pred" : "is_a", @@ -47492,10 +47073,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -48240,6 +47817,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -49196,6 +48785,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -52313,13 +51906,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/BFO_0000051", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0004151" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/subsets/blood_and_immune_upper_slim.obo b/subsets/blood_and_immune_upper_slim.obo index e4d730919..dfabdc25d 100644 --- a/subsets/blood_and_immune_upper_slim.obo +++ b/subsets/blood_and_immune_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/blood_and_immune_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/blood_and_immune_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/blood_and_immune_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -2042,6 +2042,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -2051,6 +2052,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000842 @@ -3793,17 +3795,6 @@ subset: goslim_generic xref: Wikipedia:Circulatory_system is_a: GO:0003008 ! system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0003674 name: molecular_function @@ -4746,16 +4737,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -8512,8 +8493,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -8525,7 +8506,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -8594,7 +8575,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -8670,7 +8651,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -8687,7 +8668,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -8790,8 +8771,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -10647,6 +10628,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -10668,54 +10650,6 @@ relationship: has_quality PATO:0002299 ! tubular property_value: IAO:0000232 "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string property_value: UBPROP:0000007 "tubular" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000055 name: vessel @@ -11159,22 +11093,6 @@ relationship: simultaneous_with GO:0048513 ! animal organ development property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - -[Term] -id: UBERON:0000154 -name: posterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000165 name: mouth @@ -11233,8 +11151,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -11792,7 +11708,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -12238,69 +12154,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0002405 ! immune system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -12615,6 +12468,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -14907,25 +14761,6 @@ intersection_of: UBERON:0000463 ! organism substance intersection_of: has_quality PATO:0001548 ! quality of a liquid relationship: has_quality PATO:0001548 ! quality of a liquid -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -15296,32 +15131,6 @@ property_value: editor_note "consider merging with vasculature" xsd:string property_value: UBPROP:0000001 "The cardiovascular and lymphatic systems, collectively[ncithesaurus:Vascular_System]." xsd:string {source="ncithesaurus:Vascular_System"} property_value: UBPROP:0000012 "in both MA and BTO, the arterial system and venous sytem are subtypes of the vascular system" xsd:string {external_ontology="MA"} -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0009142 name: entire embryonic mesenchyme @@ -15482,7 +15291,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -16293,6 +16101,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -17418,6 +17234,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/subsets/blood_and_immune_upper_slim.owl b/subsets/blood_and_immune_upper_slim.owl index e8ad59f31..36e01f07d 100644 --- a/subsets/blood_and_immune_upper_slim.owl +++ b/subsets/blood_and_immune_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4465,6 +4465,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -14385,10 +14416,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -19702,35 +19735,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -19983,32 +19987,32 @@ For example, A and B may be gene products and binding of B by A positively regul + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -21920,27 +21924,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -32133,13 +32116,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -32167,7 +32150,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -32316,7 +32299,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -32502,7 +32485,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -32547,7 +32530,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -32781,13 +32764,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -37355,6 +37338,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -37416,123 +37400,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - @@ -38366,7 +38233,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -38402,14 +38269,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -38556,53 +38423,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - - - - - - - - - - - - uberon - UBERON:0000154 - posterior region of body - - - - @@ -38618,19 +38438,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -38703,22 +38516,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -38841,15 +38644,15 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -38891,34 +38694,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -39222,7 +39025,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39264,14 +39067,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -40014,12 +39817,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -40063,6 +39861,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -40524,7 +40332,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -40562,14 +40370,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -40622,7 +40430,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -40659,14 +40467,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -40711,7 +40519,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -40756,7 +40564,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -40769,7 +40577,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -40976,7 +40784,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41053,14 +40861,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -41250,160 +41058,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -41725,7 +41379,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41778,14 +41432,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -41873,7 +41527,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -41920,7 +41574,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -41934,7 +41588,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -42215,6 +41869,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -42428,7 +42083,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Skeletal element that is composed of bone tissue. @@ -42478,14 +42133,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone element - + - + VSAO-modified @@ -42596,7 +42251,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -42638,14 +42293,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -42922,8 +42577,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -42936,7 +42591,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -42995,34 +42650,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -43745,7 +43400,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43779,14 +43434,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -43915,7 +43570,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43956,14 +43611,14 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -44071,9 +43726,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -44128,15 +43783,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -44155,19 +43810,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -44252,8 +43907,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -44299,11 +43954,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -44316,13 +43971,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -44435,12 +44090,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -44480,66 +44135,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -44727,7 +44382,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -44785,14 +44440,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg - + - + FMA MA @@ -45063,14 +44718,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -45115,24 +44770,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -45503,7 +45158,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -45528,14 +45183,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -45765,9 +45420,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -45799,34 +45454,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -45891,7 +45546,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -45920,7 +45575,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -45933,7 +45588,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -46005,7 +45660,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -46049,7 +45704,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -46062,7 +45717,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -46146,15 +45801,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -46174,15 +45829,15 @@ For example, A and B may be gene products and binding of B by A positively regul heart primordium - + - + - + @@ -46195,19 +45850,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + ZFA - + XAO @@ -46262,8 +45917,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -46291,11 +45946,11 @@ For example, A and B may be gene products and binding of B by A positively regul sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -46314,13 +45969,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + VHOG:0000680 - + ZFA @@ -46592,7 +46247,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -46608,14 +46263,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -46934,8 +46589,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46948,24 +46603,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -47024,7 +46679,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -47044,14 +46699,14 @@ For example, A and B may be gene products and binding of B by A positively regul heart tube - + - + ZFA-modified @@ -47670,7 +47325,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -47684,7 +47339,7 @@ For example, A and B may be gene products and binding of B by A positively regul Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue - + @@ -47697,7 +47352,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + 2012-08-14 VSAO:0000015 VSAO @@ -47736,7 +47391,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -47752,14 +47407,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -47804,7 +47459,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -47843,14 +47498,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -48610,7 +48265,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -48626,14 +48281,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -48744,7 +48399,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -48763,14 +48418,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive heart tube - + - + ZFA @@ -48944,7 +48599,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -48954,7 +48609,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005856 developing mesenchymal condensation - + @@ -48973,7 +48628,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO-modified-relation @@ -49078,7 +48733,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -49093,7 +48748,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -49106,7 +48761,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -49143,7 +48798,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -49160,14 +48815,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -49243,41 +48898,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -49909,7 +49529,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -49924,14 +49544,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -50021,7 +49641,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50038,14 +49658,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -50144,7 +49764,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50170,7 +49790,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -50186,7 +49806,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -50262,7 +49882,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -50270,7 +49890,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -50283,7 +49903,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -50380,7 +50000,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -50399,14 +50019,14 @@ For example, A and B may be gene products and binding of B by A positively regul vascular system - + - + MA @@ -50436,99 +50056,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -50539,7 +50066,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50556,14 +50083,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -50619,7 +50146,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -50627,14 +50154,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -50656,7 +50183,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -50666,14 +50193,14 @@ For example, A and B may be gene products and binding of B by A positively regul anterior lateral plate mesoderm - + - + ZFA @@ -50807,7 +50334,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50827,14 +50354,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010210 blood clot - + - + BTO @@ -50956,8 +50483,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -50970,11 +50497,11 @@ For example, A and B may be gene products and binding of B by A positively regul subdivision of skeleton - + - + @@ -50987,13 +50514,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + UBERONREF:0000003 - + VSAO @@ -51038,12 +50565,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -51070,7 +50591,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -51080,7 +50601,7 @@ For example, A and B may be gene products and binding of B by A positively regul postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -51093,7 +50614,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -51358,7 +50879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -51380,7 +50901,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0012429 hematopoietic tissue - + @@ -51393,7 +50914,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + defitional @@ -51967,7 +51488,7 @@ For example, A and 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_:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "blood coagulation" "hemostasis" @@ -1156,7 +1153,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "protein-containing material entity" "processual entity" "tube" - "head" "vessel" "anatomical wall" "anatomical structure" @@ -1175,8 +1171,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "gastrula stage" "neurula stage" "organogenesis stage" - "anterior region of body" - "posterior region of body" "mouth" "blood" "haemolymphatic fluid" @@ -1205,7 +1199,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "stomodeum" "heart" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" @@ -1297,7 +1290,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "notochordal plate" "notochordal process" "bodily fluid" - "pharynx" "presumptive endoderm" "presumptive blood" "presumptive structure" @@ -1320,7 +1312,6 @@ _:B7cde992eX2Df9dfX2D49fcX2Da17dX2D23d0c7e7c879genid970 "migrating mesenchyme population" "anlage" "vascular system" - "craniocervical region" "entire embryonic mesenchyme" "subdivision of trunk" "trunk paraxial mesoderm" diff --git a/subsets/eye_upper_slim.json b/subsets/eye_upper_slim.json index 9da4ba3d8..45ef90be0 100644 --- a/subsets/eye_upper_slim.json +++ b/subsets/eye_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/eye_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/eye_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -1345,7 +1345,7 @@ "xrefs" : [ "MESH:D009457" ] }, "comments" : [ "Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571" ], - "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], + "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim" ], "synonyms" : [ { "pred" : "hasExactSynonym", "val" : "neuroglial cell" @@ -1361,10 +1361,6 @@ "val" : "FBbt:00005144" }, { "val" : "FMA:54536" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -2821,6 +2817,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2831,6 +2828,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -3176,8 +3177,8 @@ "type" : "CLASS", "meta" : { "definition" : { - "val" : "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate.", - "xrefs" : [ "GOC:tfm", "ISBN:978-0-7020-2958-5" ] + "val" : "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate.", + "xrefs" : [ "GOC:tfm", "ISBN:9780702029585" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/cl#eye_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { @@ -4214,28 +4215,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0005575", "lbl" : "cellular_component", @@ -10828,11 +10807,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10857,7 +10836,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11009,7 +10988,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11197,7 +11176,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -11242,7 +11221,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -11480,11 +11459,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -16387,6 +16366,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -19955,6 +19976,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -24440,116 +24464,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -25352,6 +25266,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -37900,18 +37816,6 @@ }, { "pred" : "http://xmlns.com/foaf/0.1/depiction", "val" : "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" }, { "pred" : "http://xmlns.com/foaf/0.1/depiction", "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" @@ -39215,8 +39119,6 @@ "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy" ], "xrefs" : [ { "val" : "AAO:0010270" - }, { - "val" : "AEO:0000154" }, { "val" : "ZFA:0005594" } ], @@ -41900,14 +41802,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003015", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003013" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0005575", "pred" : "is_a", @@ -44862,24 +44756,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -45105,7 +44985,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -45598,26 +45484,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000982", "pred" : "http://purl.obolibrary.org/obo/RO_0002433", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001434" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -50561,10 +50427,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -51535,6 +51397,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -52491,6 +52365,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -54245,13 +54123,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0001908" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/subsets/eye_upper_slim.obo b/subsets/eye_upper_slim.obo index 42403ed5a..700f7144d 100644 --- a/subsets/eye_upper_slim.obo +++ b/subsets/eye_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/eye_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/eye_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/eye_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -542,7 +542,6 @@ name: glial cell def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [MESH:D009457] comment: Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 subset: general_cell_types_upper_slim -subset: human_reference_atlas synonym: "neuroglia" RELATED [] synonym: "neuroglial cell" EXACT [] xref: BTO:0002606 @@ -550,7 +549,6 @@ xref: CALOHA:TS-0415 xref: FBbt:00005144 xref: FMA:54536 is_a: CL:0000095 ! neuron associated cell -relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000126 @@ -1564,6 +1562,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1573,6 +1572,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000988 @@ -1759,7 +1759,7 @@ creation_date: 2010-09-15T03:39:21Z [Term] id: CL:0002363 name: keratocyte -def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate." [GOC:tfm, ISBN:978-0-7020-2958-5] +def: "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate." [GOC:tfm, ISBN:9780702029585] subset: eye_upper_slim subset: human_reference_atlas synonym: "corneal fibroblast" EXACT [] @@ -2363,17 +2363,6 @@ def: "A circulatory system process carried out by the heart. The heart is a holl synonym: "cardiac process" RELATED [] is_a: GO:0003013 ! circulatory system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0005575 name: cellular_component @@ -5705,8 +5694,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -5718,7 +5707,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -5787,7 +5776,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -5863,7 +5852,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -5880,7 +5869,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -5983,8 +5972,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7089,6 +7078,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7881,8 +7871,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -8440,7 +8428,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -9331,69 +9319,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0004456 ! entire sense organ system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -9796,6 +9721,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -16073,10 +15999,6 @@ xref: Wikipedia:Ciliary_processes is_a: UBERON:0000481 ! multi-tissue structure relationship: part_of UBERON:0001775 ! ciliary body property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb" xsd:anyURI property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb" xsd:anyURI @@ -16106,7 +16028,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -16735,7 +16656,6 @@ namespace: uberon def: "Material anatomical entity that forms the outermost boundary of an anatomical structure." [https://github.com/obophenotype/uberon/issues/1324] subset: common_anatomy xref: AAO:0010270 -xref: AEO:0000154 xref: ZFA:0005594 is_a: UBERON:0000465 ! material anatomical entity relationship: bounding_layer_of UBERON:0000061 ! anatomical structure @@ -17185,6 +17105,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -18311,6 +18239,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/subsets/eye_upper_slim.owl b/subsets/eye_upper_slim.owl index 6d5960a50..fec82a604 100644 --- a/subsets/eye_upper_slim.owl +++ b/subsets/eye_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4480,6 +4480,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -9034,7 +9065,6 @@ For example, A and B may be gene products and binding of B by A positively regul A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. - BTO:0002606 CALOHA:TS-0415 FBbt:00005144 @@ -9042,7 +9072,6 @@ For example, A and B may be gene products and binding of B by A positively regul neuroglial cell neuroglia - Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell @@ -12368,10 +12397,12 @@ radial glial cells acting as neural progenitors throughout life. A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -12900,7 +12931,7 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. 2010-09-22T01:57:40Z @@ -12913,9 +12944,9 @@ radial glial cells acting as neural progenitors throughout life. - A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic cell located between the lamellae with a large flattened nucleus and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratin sulfate. + A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. GOC:tfm - ISBN:978-0-7020-2958-5 + ISBN:9780702029585 @@ -14682,35 +14713,6 @@ plexiform layer. - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -14813,32 +14815,32 @@ plexiform layer. + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -23447,13 +23449,13 @@ plexiform layer. mice - + mouse - + @@ -23481,7 +23483,7 @@ plexiform layer. mouse - + @@ -23630,7 +23632,7 @@ plexiform layer. eukaryotes - + @@ -23816,7 +23818,7 @@ plexiform layer. multicellular animals - + @@ -23861,7 +23863,7 @@ plexiform layer. deuterostomes - + @@ -24095,13 +24097,13 @@ plexiform layer. eutherian mammals - + placental mammals - + @@ -26678,6 +26680,7 @@ plexiform layer. + BFO:0000003 uberon UBERON:0000000 @@ -26724,7 +26727,7 @@ plexiform layer. - + @@ -26765,14 +26768,14 @@ plexiform layer. camera-type eye - + - + definitional @@ -27871,7 +27874,7 @@ plexiform layer. - + The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube) @@ -27897,7 +27900,7 @@ plexiform layer. external ectoderm http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png - + @@ -27910,7 +27913,7 @@ plexiform layer. - + EHDAA2 @@ -28292,7 +28295,7 @@ plexiform layer. - + @@ -28328,14 +28331,14 @@ plexiform layer. gastrula stage - + - + BILS @@ -28589,19 +28592,12 @@ plexiform layer. - - - - - - - @@ -28674,22 +28670,12 @@ plexiform layer. https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -28812,15 +28798,15 @@ plexiform layer. - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -28862,34 +28848,34 @@ plexiform layer. blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -29193,7 +29179,7 @@ plexiform layer. - + @@ -29235,14 +29221,14 @@ plexiform layer. organism substance - + - + this relationship may be too strong and may be weakened in future @@ -29985,12 +29971,7 @@ plexiform layer. - - - - - - + @@ -30034,6 +30015,16 @@ plexiform layer. epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -30598,7 +30589,7 @@ plexiform layer. - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -30636,14 +30627,14 @@ plexiform layer. ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -30696,7 +30687,7 @@ plexiform layer. - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -30733,14 +30724,14 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -30785,7 +30776,7 @@ plexiform layer. - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -30830,7 +30821,7 @@ plexiform layer. mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -30843,7 +30834,7 @@ plexiform layer. - + Bgee:AN @@ -31065,7 +31056,7 @@ plexiform layer. - + @@ -31131,14 +31122,14 @@ plexiform layer. cranial nerve II - + - + EHDAA2 @@ -31282,7 +31273,7 @@ plexiform layer. - + @@ -31359,14 +31350,14 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -31444,7 +31435,7 @@ plexiform layer. - + @@ -31469,7 +31460,7 @@ plexiform layer. - + The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. requires review for applicability to invertebrate structures, e.g. synganglion @@ -31532,11 +31523,11 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb - + - + @@ -31549,13 +31540,13 @@ plexiform layer. - + FMA - + Bgee:AN @@ -31856,9 +31847,9 @@ plexiform layer. + + - - @@ -31883,7 +31874,7 @@ plexiform layer. - + @@ -31939,44 +31930,44 @@ plexiform layer. cornea http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + MA - + MA - + FMA-isa - + definitional @@ -32165,10 +32156,10 @@ plexiform layer. + + - - The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. @@ -32219,44 +32210,44 @@ plexiform layer. retina http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png - + - + - + - + - + FMA - + FMA - + FMA - + EHDAA2 @@ -32330,8 +32321,8 @@ plexiform layer. - - + + @@ -32367,24 +32358,24 @@ plexiform layer. eye - + - + - + PMID:21062451 - + PMID:21062451 @@ -32518,160 +32509,6 @@ plexiform layer. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -32993,7 +32830,7 @@ plexiform layer. - + @@ -33046,14 +32883,14 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -33141,7 +32978,7 @@ plexiform layer. - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -33188,7 +33025,7 @@ plexiform layer. central nervous system - + @@ -33202,7 +33039,7 @@ plexiform layer. - + Bgee:AN @@ -33737,6 +33574,7 @@ plexiform layer. AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -33949,7 +33787,7 @@ plexiform layer. - + Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 @@ -33974,14 +33812,14 @@ plexiform layer. mesothelium http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg - + - + FMA @@ -34354,7 +34192,7 @@ plexiform layer. - + A tube extending from the mouth to the anus. @@ -34396,14 +34234,14 @@ plexiform layer. digestive tract - + - + NCBIBook:NBK10107 @@ -34483,7 +34321,7 @@ plexiform layer. - + The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 @@ -34506,7 +34344,7 @@ plexiform layer. ciliary muscle http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png - + @@ -34525,7 +34363,7 @@ plexiform layer. - + FMA @@ -34666,7 +34504,7 @@ plexiform layer. - + @@ -34718,14 +34556,14 @@ plexiform layer. eyelid https://upload.wikimedia.org/wikipedia/commons/8/84/Eye_makeup.jpg - + - + multiple @@ -35020,7 +34858,7 @@ plexiform layer. - + @@ -35063,14 +34901,14 @@ plexiform layer. iris - + - + XAO @@ -35142,7 +34980,7 @@ plexiform layer. - + @@ -35194,14 +35032,14 @@ plexiform layer. corneal epithelium http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + ISBN:0781772214 @@ -35297,16 +35135,16 @@ plexiform layer. - - + + - - + + @@ -35348,44 +35186,44 @@ plexiform layer. sclera http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + FMA - + ZFA - + ISBN:0781772214 - + cjm ISBN:0781772214 Wikipedia @@ -35445,7 +35283,7 @@ plexiform layer. - + @@ -35484,14 +35322,14 @@ plexiform layer. ciliary body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + ISBN:0781772214 @@ -35539,14 +35377,14 @@ plexiform layer. - + - + @@ -35609,24 +35447,24 @@ plexiform layer. optic choroid http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + MA - + Wikipedia @@ -35726,7 +35564,7 @@ plexiform layer. - + @@ -35775,14 +35613,14 @@ plexiform layer. substantia propria of cornea http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + cjm ISBN:0781772214 Wikipedia @@ -35859,9 +35697,9 @@ plexiform layer. - - - + + + A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 @@ -35881,15 +35719,15 @@ plexiform layer. ciliary epithelium - + - + - + @@ -35902,19 +35740,19 @@ plexiform layer. - + MA - + MP - + Wikipedia @@ -36037,7 +35875,7 @@ plexiform layer. - + @@ -36098,14 +35936,14 @@ plexiform layer. pigmented layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + Wikipedia @@ -36209,7 +36047,7 @@ plexiform layer. - + @@ -36243,14 +36081,14 @@ plexiform layer. photoreceptor layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + ZFA @@ -36423,7 +36261,7 @@ plexiform layer. - + @@ -36470,14 +36308,14 @@ plexiform layer. outer nuclear layer of retina - + - + soma ZFA @@ -36815,7 +36653,7 @@ plexiform layer. - + @@ -36874,7 +36712,7 @@ plexiform layer. ganglionic layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + @@ -36887,7 +36725,7 @@ plexiform layer. - + FMA @@ -36963,7 +36801,7 @@ plexiform layer. - + @@ -37019,14 +36857,14 @@ plexiform layer. nerve fiber layer of retina - + - + FMA @@ -37404,7 +37242,7 @@ plexiform layer. - + @@ -37440,14 +37278,14 @@ plexiform layer. aqueous humor of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + FMA def states A and P located_in in EHDAA2 VHOG @@ -37629,7 +37467,7 @@ plexiform layer. - + @@ -37653,7 +37491,7 @@ plexiform layer. vitreous body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + @@ -37666,7 +37504,7 @@ plexiform layer. - + neural ectoderm of optic cup ISBN:0781772214 @@ -37801,8 +37639,8 @@ plexiform layer. - - + + @@ -37835,24 +37673,24 @@ plexiform layer. anterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png - + - + - + FMA - + cjm @@ -37903,8 +37741,8 @@ plexiform layer. - - + + @@ -37934,24 +37772,24 @@ plexiform layer. posterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + FMA - + cjm @@ -37987,9 +37825,9 @@ plexiform layer. - - - + + + @@ -38039,15 +37877,15 @@ plexiform layer. conjunctiva http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png - + - + - + @@ -38060,19 +37898,19 @@ plexiform layer. - + cjm - + MA - + ISBN:0781772214 @@ -38136,7 +37974,7 @@ plexiform layer. - + The most anterior region of the brain including both the telencephalon and diencephalon. @@ -38183,14 +38021,14 @@ plexiform layer. forebrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -38266,14 +38104,14 @@ plexiform layer. - + - + The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. developmental relationships need revised @@ -38326,24 +38164,24 @@ plexiform layer. midbrain http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG - + - + - + definitional - + Bgee:AN @@ -38446,14 +38284,14 @@ plexiform layer. - + - + The division of the forebrain that develops from the foremost primary cerebral vesicle. @@ -38516,24 +38354,24 @@ plexiform layer. diencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + definitional - + definitional @@ -38971,7 +38809,7 @@ plexiform layer. - + Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG] @@ -39011,14 +38849,14 @@ plexiform layer. midbrain tegmentum http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png - + - + ZFA @@ -39197,8 +39035,8 @@ plexiform layer. - - + + @@ -39211,7 +39049,7 @@ plexiform layer. - + @@ -39270,34 +39108,34 @@ plexiform layer. blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -39656,7 +39494,7 @@ plexiform layer. - + @@ -39669,7 +39507,7 @@ plexiform layer. - + The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. @@ -39720,25 +39558,25 @@ plexiform layer. hindbrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + modified-source-relation ABA - + Bgee:AN @@ -40557,7 +40395,7 @@ plexiform layer. - + Vasculature that is part of the eye region. not part of the eye in ZFA. Note this changed to a blood vessel in ZFA @@ -40580,14 +40418,14 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb - + - + ISBN:0781772214 @@ -40646,7 +40484,7 @@ plexiform layer. - + @@ -40680,14 +40518,14 @@ plexiform layer. musculoskeletal system - + - + check ctenophore @@ -40825,15 +40663,15 @@ plexiform layer. - + - - + + Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). TODO - add superclass to unify with VNC? @@ -40892,34 +40730,34 @@ plexiform layer. https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb - + - + - + - + ZFA - + definitional - + definitional @@ -41361,7 +41199,7 @@ plexiform layer. - + @@ -41402,14 +41240,14 @@ plexiform layer. EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -41517,9 +41355,9 @@ plexiform layer. - - - + + + @@ -41574,15 +41412,15 @@ plexiform layer. notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -41601,19 +41439,19 @@ plexiform layer. - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -41698,8 +41536,8 @@ plexiform layer. - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -41745,11 +41583,11 @@ plexiform layer. somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -41762,13 +41600,13 @@ plexiform layer. - + GOTAX:0000352 - + ZFA @@ -41881,12 +41719,12 @@ plexiform layer. - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -41926,66 +41764,66 @@ plexiform layer. http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -42368,14 +42206,14 @@ plexiform layer. - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -42420,24 +42258,24 @@ plexiform layer. hematopoietic system - + - + - + FMA - + definitional @@ -42502,8 +42340,8 @@ plexiform layer. - - + + @@ -42529,11 +42367,11 @@ plexiform layer. iris epithelium - + - + @@ -42546,13 +42384,13 @@ plexiform layer. - + MA - + MP @@ -42702,7 +42540,7 @@ plexiform layer. - + Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. Do not merge with neurogenic placode Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons @@ -42722,7 +42560,7 @@ plexiform layer. cranial placode - + @@ -42735,7 +42573,7 @@ plexiform layer. - + PMID:11523831 PMID:22512454 @@ -42940,7 +42778,7 @@ plexiform layer. - + @@ -42953,7 +42791,7 @@ plexiform layer. - + The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. consider adding class for organizer. Consider adding separate class for isthmus as a structure Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG] @@ -42983,11 +42821,11 @@ plexiform layer. midbrain-hindbrain boundary - + - + @@ -43001,13 +42839,13 @@ plexiform layer. - + ZFA - + ZFA @@ -43172,7 +43010,7 @@ plexiform layer. - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -43197,14 +43035,14 @@ plexiform layer. presomitic mesoderm - + - + Bgee:AN @@ -43446,7 +43284,7 @@ plexiform layer. - + @@ -43484,7 +43322,7 @@ plexiform layer. eye primordium - + @@ -43497,7 +43335,7 @@ plexiform layer. - + PMID:16496288 XAO @@ -43553,8 +43391,8 @@ plexiform layer. - - + + @@ -43583,24 +43421,24 @@ plexiform layer. optic cup - + - + - + ZFA - + ZFA @@ -43665,7 +43503,7 @@ plexiform layer. - + @@ -43706,7 +43544,7 @@ plexiform layer. lens placode http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png - + @@ -43719,7 +43557,7 @@ plexiform layer. - + ZFA @@ -43783,9 +43621,9 @@ plexiform layer. - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -43817,34 +43655,34 @@ plexiform layer. neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -43955,7 +43793,7 @@ plexiform layer. - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -43984,7 +43822,7 @@ plexiform layer. paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43997,7 +43835,7 @@ plexiform layer. - + Bgee:AN @@ -44109,7 +43947,7 @@ plexiform layer. - + @@ -44153,7 +43991,7 @@ plexiform layer. lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -44166,7 +44004,7 @@ plexiform layer. - + EHDAA2 VHOG @@ -44250,15 +44088,15 @@ plexiform layer. - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -44278,15 +44116,15 @@ plexiform layer. heart primordium - + - + - + @@ -44299,19 +44137,19 @@ plexiform layer. - + ZFA - + ZFA - + XAO @@ -44366,8 +44204,8 @@ plexiform layer. - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -44395,11 +44233,11 @@ plexiform layer. sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -44418,13 +44256,13 @@ plexiform layer. - + VHOG:0000680 - + ZFA @@ -44848,7 +44686,7 @@ plexiform layer. - + Mesenchyme that is part of a developing camera-type eye. TODO - change mesenchyme relationships to precursor_of EHDAA2:0000485 @@ -44860,14 +44698,14 @@ plexiform layer. UBERON:0003314 eye mesenchyme - + - + EHDAA2 @@ -45725,7 +45563,7 @@ plexiform layer. - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -45741,14 +45579,14 @@ plexiform layer. intraembryonic coelom - + - + Wikipedia @@ -45853,7 +45691,7 @@ plexiform layer. - + The part of the retina that contains neurons and photoreceptor cells[GO]. (...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG] @@ -45885,14 +45723,14 @@ plexiform layer. retinal neural layer - + - + Bgee:AN @@ -46150,7 +45988,7 @@ plexiform layer. - + The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure The layer of undifferentiated, proliferating cells that line the neural tube lumen @@ -46168,7 +46006,7 @@ plexiform layer. neural tube ventricular layer - + @@ -46181,7 +46019,7 @@ plexiform layer. - + NCBIBook:NBK10047 @@ -46241,7 +46079,7 @@ plexiform layer. - + @@ -46265,7 +46103,7 @@ plexiform layer. neural tube mantle layer - + @@ -46278,7 +46116,7 @@ plexiform layer. - + by division NCBIBook:NBK10047 @@ -46315,7 +46153,7 @@ plexiform layer. - + @@ -46332,14 +46170,14 @@ plexiform layer. neural tube marginal layer - + - + forms from axons @@ -46614,9 +46452,9 @@ plexiform layer. - - - + + + @@ -46649,34 +46487,34 @@ plexiform layer. optic vesicle http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png - + - + - + - + ZFA - + GO-def - + ZFA @@ -46792,8 +46630,8 @@ plexiform layer. - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46806,24 +46644,24 @@ plexiform layer. UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -46882,7 +46720,7 @@ plexiform layer. - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -46902,14 +46740,14 @@ plexiform layer. heart tube - + - + ZFA-modified @@ -46990,7 +46828,7 @@ plexiform layer. - + @@ -47006,14 +46844,14 @@ plexiform layer. eye muscle - + - + MA @@ -47217,7 +47055,7 @@ plexiform layer. - + A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN] @@ -47247,14 +47085,14 @@ plexiform layer. Descemet's membrane https://github.com/obophenotype/uberon/issues/15 - + - + Cline et al @@ -48039,7 +47877,7 @@ plexiform layer. - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -48055,14 +47893,14 @@ plexiform layer. skeletal element - + - + VSAO @@ -48107,7 +47945,7 @@ plexiform layer. - + @@ -48146,14 +47984,14 @@ plexiform layer. UBERON:0004770 articular system - + - + FMA @@ -49062,7 +48900,7 @@ plexiform layer. - + Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO] EFO:0003492 @@ -49084,14 +48922,14 @@ plexiform layer. head mesenchyme - + - + EHDAA2 @@ -49158,7 +48996,7 @@ plexiform layer. - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -49174,14 +49012,14 @@ plexiform layer. trunk mesenchyme - + - + EHDAA2 @@ -49204,7 +49042,7 @@ plexiform layer. - + The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG] @@ -49229,14 +49067,14 @@ plexiform layer. myelencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -49763,7 +49601,7 @@ plexiform layer. - + Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 @@ -49771,7 +49609,7 @@ plexiform layer. UBERON:0005427 corneal primordium - + @@ -49790,7 +49628,7 @@ plexiform layer. - + ZFA @@ -49813,7 +49651,7 @@ plexiform layer. - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -49832,14 +49670,14 @@ plexiform layer. primitive heart tube - + - + ZFA @@ -50048,7 +49886,7 @@ plexiform layer. - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -50058,7 +49896,7 @@ plexiform layer. UBERON:0005856 developing mesenchymal condensation - + @@ -50077,7 +49915,7 @@ plexiform layer. - + AEO-modified-relation @@ -50134,9 +49972,9 @@ plexiform layer. - - - + + + A serous sac which is the aggregate of the conjunctiva plus the conjunctival space. EMAPA:18233 FMA:20291 @@ -50147,15 +49985,15 @@ plexiform layer. UBERON:0005908 conjunctival sac - + - + - + @@ -50168,19 +50006,19 @@ plexiform layer. - + FMA - + HPO:pr - + MA @@ -50435,7 +50273,7 @@ plexiform layer. - + @@ -50458,14 +50296,14 @@ plexiform layer. future diencephalon - + - + EHDAA2 @@ -50648,7 +50486,7 @@ plexiform layer. - + @@ -50672,14 +50510,14 @@ plexiform layer. future spinal cord - + - + EHDAA2 @@ -50716,7 +50554,7 @@ plexiform layer. - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -50731,7 +50569,7 @@ plexiform layer. notochordal plate - + @@ -50744,7 +50582,7 @@ plexiform layer. - + EHDAA2 @@ -50781,7 +50619,7 @@ plexiform layer. - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -50798,14 +50636,14 @@ plexiform layer. The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -51709,7 +51547,7 @@ plexiform layer. - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -51724,14 +51562,14 @@ plexiform layer. Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -51886,8 +51724,8 @@ plexiform layer. - - + + @@ -51914,24 +51752,24 @@ plexiform layer. presumptive hindbrain - + - + - + XAO-abduced - + cjm @@ -51988,7 +51826,7 @@ plexiform layer. - + @@ -52007,14 +51845,14 @@ plexiform layer. presumptive midbrain hindbrain boundary - + - + ZFA @@ -52053,7 +51891,7 @@ plexiform layer. - + @@ -52070,14 +51908,14 @@ plexiform layer. presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -52176,7 +52014,7 @@ plexiform layer. - + @@ -52202,7 +52040,7 @@ plexiform layer. presumptive paraxial mesoderm - + @@ -52218,7 +52056,7 @@ plexiform layer. - + https://github.com/obophenotype/uberon/issues/1277 @@ -52300,7 +52138,7 @@ plexiform layer. - + A neural decussation that is part of a diencephalon. FMA:62446 diencephalon decussation @@ -52308,7 +52146,7 @@ plexiform layer. UBERON:0007425 decussation of diencephalon - + @@ -52321,7 +52159,7 @@ plexiform layer. - + Obol @@ -52396,7 +52234,7 @@ plexiform layer. - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -52404,7 +52242,7 @@ plexiform layer. UBERON:0007524 dense mesenchyme tissue - + @@ -52417,7 +52255,7 @@ plexiform layer. - + AEO @@ -52657,7 +52495,7 @@ plexiform layer. - + An axon tract that is part of a brain. the NIFSTD class 'nerve tract' is classified under 'regional part of brain', so it may seem like it belongs here, but actually includes spinal cord tracts FMA:83848 @@ -52667,14 +52505,14 @@ plexiform layer. UBERON:0007702 tract of brain - + - + cjm @@ -52702,7 +52540,7 @@ plexiform layer. - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -52721,14 +52559,14 @@ plexiform layer. vascular system - + - + MA @@ -52861,7 +52699,7 @@ plexiform layer. - + @@ -52878,14 +52716,14 @@ plexiform layer. UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -52981,8 +52819,8 @@ plexiform layer. - - + + TODO - developmental relationships for lines TAO:0007044 ZFA:0007044 @@ -52992,24 +52830,24 @@ plexiform layer. UBERON:0009615 midbrain hindbrain boundary neural plate - + - + - + ZFA - + https://github.com/obophenotype/uberon/issues/438 Bgee:AN @@ -53043,14 +52881,14 @@ plexiform layer. - + - + @@ -53075,24 +52913,24 @@ plexiform layer. presumptive midbrain - + - + - + ZFA - + ZFA @@ -53138,7 +52976,7 @@ plexiform layer. - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -53146,14 +52984,14 @@ plexiform layer. UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -53175,7 +53013,7 @@ plexiform layer. - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -53185,14 +53023,14 @@ plexiform layer. anterior lateral plate mesoderm - + - + ZFA @@ -53248,14 +53086,14 @@ plexiform layer. - + EHDAA2:0001315 EHDAA:1122 uberon UBERON:0009920 optic neural crest - + @@ -53268,7 +53106,7 @@ plexiform layer. - + EHDAA2 @@ -53402,7 +53240,7 @@ plexiform layer. - + @@ -53427,14 +53265,14 @@ plexiform layer. eyeball of camera-type eye - + - + FMA @@ -53475,8 +53313,8 @@ plexiform layer. - - + + Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 @@ -53490,11 +53328,11 @@ plexiform layer. midbrain basal plate - + - + @@ -53507,13 +53345,13 @@ plexiform layer. - + EHDAA2 - + ZFA @@ -53541,7 +53379,7 @@ plexiform layer. - + Portion of neural tube that gives rise to the midbrain. we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed TAO:0007039 @@ -53550,14 +53388,14 @@ plexiform layer. UBERON:0010286 midbrain neural tube - + - + ZFA @@ -53584,7 +53422,7 @@ plexiform layer. - + @@ -53600,14 +53438,14 @@ plexiform layer. UBERON:0010312 immature eye - + - + definitional @@ -53825,10 +53663,6 @@ plexiform layer. UBERON:0010427 ciliary processes http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray875.png - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Eye_R.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Eye_R.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb @@ -53885,8 +53719,8 @@ plexiform layer. - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -53899,11 +53733,11 @@ plexiform layer. subdivision of skeleton - + - + @@ -53916,13 +53750,13 @@ plexiform layer. - + UBERONREF:0000003 - + VSAO @@ -53967,12 +53801,6 @@ plexiform layer. - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -53999,7 +53827,7 @@ plexiform layer. - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -54009,7 +53837,7 @@ plexiform layer. postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -54022,7 +53850,7 @@ plexiform layer. - + cjm @@ -54134,7 +53962,7 @@ plexiform layer. - + Muscles within the eye (bulbus oculi).[AAO] AAO:0010038 EMAPA:18808 @@ -54145,14 +53973,14 @@ plexiform layer. UBERON:0011222 intra-ocular muscle - + - + EMAPA @@ -54422,7 +54250,7 @@ plexiform layer. - + @@ -54464,7 +54292,7 @@ plexiform layer. anterior uvea - + @@ -54477,7 +54305,7 @@ plexiform layer. - + MP @@ -55257,7 +55085,7 @@ plexiform layer. - + @@ -55280,7 +55108,7 @@ plexiform layer. UBERON:0016887 entire extraembryonic component - + @@ -55293,7 +55121,7 @@ plexiform layer. - + AEO @@ -55986,7 +55814,6 @@ plexiform layer. 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+_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid731 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid786 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid836 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid853 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid866 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid871 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid880 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid886 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid900 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid906 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid914 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid922 +_:B11339660X2D3dc4X2D4a16X2D8efaX2D5e02455511e4genid969 "continuant" "occurrent" "independent continuant" @@ -493,7 +492,6 @@ _:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid969 "muscle system process" "circulatory system process" "heart process" - "respiratory system process" "cellular_component" "extracellular region" "fibrinogen complex" @@ -936,7 +934,6 @@ _:B438fdcb3X2D8457X2D4a46X2D899dX2D6072d0b2c3f9genid969 "retina" "eye" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" diff --git a/subsets/general_cell_types_upper_slim.json b/subsets/general_cell_types_upper_slim.json index 5ec8075d9..98de6c0af 100644 --- a/subsets/general_cell_types_upper_slim.json +++ b/subsets/general_cell_types_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/general_cell_types_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/general_cell_types_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -1340,7 +1340,7 @@ "xrefs" : [ "MESH:D009457" ] }, "comments" : [ "Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571" ], - "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], + "subsets" : [ "http://purl.obolibrary.org/obo/cl#general_cell_types_upper_slim" ], "synonyms" : [ { "pred" : "hasExactSynonym", "val" : "neuroglial cell" @@ -1356,10 +1356,6 @@ "val" : "FBbt:00005144" }, { "val" : "FMA:54536" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -1976,16 +1972,6 @@ "val" : "FMA:86667" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/CL_0000335", - "lbl" : "mesenchyme condensation cell", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors.", - "xrefs" : [ "GOC:tfm", "PMID:5025404" ] - } - } }, { "id" : "http://purl.obolibrary.org/obo/CL_0000349", "lbl" : "extraembryonic cell", @@ -2852,6 +2838,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2862,6 +2849,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -4554,28 +4545,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0005575", "lbl" : "cellular_component", @@ -5489,28 +5458,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -10698,11 +10645,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10727,7 +10674,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -10879,7 +10826,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11067,7 +11014,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -11112,7 +11059,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -11350,11 +11297,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -16995,6 +16942,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -20563,6 +20552,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -20699,102 +20691,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000043", "lbl" : "tendon", @@ -21826,26 +21722,6 @@ "val" : "https://github.com/obophenotype/uberon/issues/533" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", - "lbl" : "posterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000165", "lbl" : "mouth", @@ -23918,116 +23794,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -24663,6 +24429,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -27264,71 +27032,6 @@ "val" : "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0003089", - "lbl" : "sclerotome", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. 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}, { - "val" : "TAO:0001080" - }, { - "val" : "UMLS:C0183176" - }, { - "val" : "VHOG:0000680" - }, { - "val" : "Wikipedia:Sclerotome" - }, { - "val" : "XAO:0000397" - }, { - "val" : "ZFA:0001080" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Skeletogenic portion of somites.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000012", - "val" : "part_of somite in XAO" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0003103", "lbl" : "compound organ", @@ -28491,86 +28194,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0005856", - "lbl" : "developing mesenchymal condensation", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A delimited region of dense mesenchyme within looser mesenchyme.", - "xrefs" : [ "AEO:0000148" ] - }, - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "mesenchyme condensation", - "xrefs" : [ "EMAPA:25351" ] - } ], - "xrefs" : [ { - "val" : "AEO:0000148" - }, { - "val" : "EHDAA2_RETIRED:0003148" - }, { - "val" : "EHDAA:8979" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0005944", - "lbl" : "axial skeleton plus cranial skeleton", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified].", - "xrefs" : [ "FMA:71221", "VSAO:0000056", "Wikipedia:Axial_skeleton", "https://github.com/obophenotype/uberon/issues/44", "https://github.com/obophenotype/uberon/wiki/The-axial-skeleton" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim" ], - "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "skeleton axiale", - "xrefs" : [ "Wikipedia:Axial_skeleton" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000963" - }, { - "val" : "EMAPA:17214" - }, { - "val" : "EMAPA:18043" - }, { - "val" : "MA:0000308" - }, { - "val" : "NCIT:C32172" - }, { - "val" : "SCTID:361725000" - }, { - "val" : "UMLS:C0222645" - }, { - "val" : "VSAO:0000056" - }, { - "val" : "Wikipedia:Axial_skeleton" - }, { - "val" : "XAO:0004011" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", - "val" : "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0006267", "lbl" : "notochordal plate", @@ -28643,47 +28266,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "lbl" : "pharynx", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The pharynx is the part of the digestive system immediately posterior to the mouth[GO].", - "xrefs" : [ "GO:0060465" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#grouping_class", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "anterior part of foregut" - }, { - "pred" : "hasRelatedSynonym", - "val" : "pharyngeal tube" - } ], - "xrefs" : [ { - "val" : "MAT:0000049" - }, { - "val" : "MESH:D010614" - }, { - "val" : "MIAA:0000049" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/IAO_0000232", - "val" : "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." - }, { - "pred" : "http://purl.obolibrary.org/obo/IAO_0006012", - "val" : "2023-04-20" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "branchial" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "pharyngeal" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0006595", "lbl" : "presumptive endoderm", @@ -29089,82 +28671,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "lbl" : "migrating mesenchyme population", - 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"val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0007845", "pred" : "is_a", @@ -38324,36 +37570,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0010371", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", "obj" : "http://purl.obolibrary.org/obo/CL_0002077" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011216", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "cjm" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000075", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "UBERONREF:0000003" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0010912", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004288", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "VSAO" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "is_a", @@ -38368,10 +37584,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011216", "pred" : "is_a", @@ -38386,16 +37598,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011216", "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000061", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "VSAO" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011676", "pred" : "is_a", @@ -38600,6 +37802,10 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", "pred" : "http://purl.obolibrary.org/obo/RO_0002103", "obj" : "http://purl.obolibrary.org/obo/CL_0000100" + }, { + "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", + "pred" : "http://purl.obolibrary.org/obo/RO_0002160", + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_7742" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0014892", "pred" : "http://purl.obolibrary.org/obo/RO_0002202", @@ -39208,6 +38414,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -40164,6 +39382,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -42109,13 +41331,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/RO_0002493", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0000068" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], @@ -42397,13 +41612,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/RO_0002387", "fillerId" : "http://purl.obolibrary.org/obo/UBERON_0003077" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0007530", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0003104" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0000056", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0016477" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0007846", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0007845" ], @@ -42796,7 +42004,7 @@ }, { "predicateId" : "http://purl.obolibrary.org/obo/RO_0002551", "domainClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000061", "http://purl.obolibrary.org/obo/UBERON_0000475" ], - "rangeClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000465", "http://purl.obolibrary.org/obo/UBERON_0010912" ] + "rangeClassIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000465" ] }, { "predicateId" : "http://purl.obolibrary.org/obo/RO_0002566", "domainClassIds" : [ "http://purl.obolibrary.org/obo/BFO_0000002" ], diff --git a/subsets/general_cell_types_upper_slim.obo b/subsets/general_cell_types_upper_slim.obo index 49daf86c8..824b27a28 100644 --- a/subsets/general_cell_types_upper_slim.obo +++ b/subsets/general_cell_types_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/general_cell_types_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/general_cell_types_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/general_cell_types_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -565,7 +565,6 @@ name: glial cell def: "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons." [MESH:D009457] comment: Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 subset: general_cell_types_upper_slim -subset: human_reference_atlas synonym: "neuroglia" RELATED [] synonym: "neuroglial cell" EXACT [] xref: BTO:0002606 @@ -573,7 +572,6 @@ xref: CALOHA:TS-0415 xref: FBbt:00005144 xref: FMA:54536 is_a: CL:0000095 ! neuron associated cell -relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000133 @@ -943,12 +941,6 @@ is_a: CL:0011012 ! neural crest cell is_a: CL:0011026 ! progenitor cell relationship: develops_from CL:0007004 ! premigratory neural crest cell -[Term] -id: CL:0000335 -name: mesenchyme condensation cell -def: "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors." [GOC:tfm, PMID:5025404] -is_a: CL:0008019 ! mesenchymal cell - [Term] id: CL:0000349 name: extraembryonic cell @@ -1609,6 +1601,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1618,6 +1611,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000842 @@ -2597,17 +2591,6 @@ def: "A circulatory system process carried out by the heart. The heart is a holl synonym: "cardiac process" RELATED [] is_a: GO:0003013 ! circulatory system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0005575 name: cellular_component @@ -3155,16 +3138,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -5773,8 +5746,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -5786,7 +5759,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -5855,7 +5828,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -5931,7 +5904,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -5948,7 +5921,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -6051,8 +6024,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7403,6 +7376,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7464,54 +7438,6 @@ relationship: has_quality PATO:0002299 ! tubular property_value: IAO:0000232 "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string property_value: UBPROP:0000007 "tubular" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000043 name: tendon @@ -8026,22 +7952,6 @@ relationship: simultaneous_with GO:0048513 ! animal organ development property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - -[Term] -id: UBERON:0000154 -name: posterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000165 name: mouth @@ -8100,8 +8010,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -8631,7 +8539,7 @@ union_of: UBERON:0000490 ! unilaminar epithelium relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -8974,7 +8882,6 @@ xref: Wikipedia:Endocrine_system xref: XAO:0000158 xref: ZFA:0001158 is_a: UBERON:0015204 ! glandular system -disjoint_from: UBERON:0001004 ! respiratory system disjoint_from: UBERON:0001007 ! digestive system disjoint_from: UBERON:0001009 ! circulatory system disjoint_from: UBERON:0001016 ! nervous system @@ -9069,71 +8976,6 @@ relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system property_value: UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"} property_value: UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002330 ! exocrine system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:0002405 ! immune system -disjoint_from: UBERON:0004456 ! entire sense organ system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -9469,6 +9311,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -9565,7 +9408,7 @@ intersection_of: UBERON:0002385 ! muscle tissue intersection_of: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: composed_primarily_of CL:0008002 ! skeletal muscle fiber relationship: develops_from UBERON:0003082 ! myotome -relationship: part_of UBERON:0014892 ! skeletal muscle organ +relationship: part_of UBERON:0014892 ! skeletal muscle organ, vertebrate property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/c/c0/Skeletal_muscle.jpg" xsd:anyURI property_value: editor_note "TODO - add skeletal muscle organ? See GO:0060538 skeletal muscle organ development. Todo - group FBbt:00005073 - somatic muscle." xsd:string property_value: UBPROP:0000001 "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005277", ontology="TAO", source="ZFIN:curator"} @@ -10783,38 +10626,6 @@ property_value: editor_note "The term 'myotome' is also used to describe the mus property_value: UBPROP:0000001 "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001056", ontology="TAO", source="ZFIN:curator"} property_value: UBPROP:0000003 "In all vertebrates, the skeletal muscle of the body axis is chiefly derived from an early embryonic compartment, known as the myotome.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001244", ontology="VHOG", source="DOI:10.1038/sj.embor.embor920 Hollway GE, Currie PD, Myotome meanderings. Cellular morphogenesis and the making of muscle. EMBO Rep.(2003)", source="http://bgee.unil.ch/"} -[Term] -id: UBERON:0003089 -name: sclerotome -namespace: uberon -def: "Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]." [https://github.com/obophenotype/uberon/issues/316, Wikipedia:Sclerotome, XB:curator] -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "sclerotomes" EXACT OMO:0003004 [TAO:0001080] -synonym: "sclerotomus" RELATED LATIN [Wikipedia:Sclerotome] -xref: AAO:0010571 -xref: AEO:0000212 -xref: BTO:0006255 {http://purl.org/dc/terms/contributor="https://orcid.org/0000-0003-4423-4370"} -xref: EHDAA2:0003439 -xref: EMAPA:31159 -xref: FMA:295652 -xref: NCIT:C34287 -xref: TAO:0001080 -xref: UMLS:C0183176 {source="ncithesaurus:Sclerotome"} -xref: VHOG:0000680 -xref: Wikipedia:Sclerotome -xref: XAO:0000397 -xref: ZFA:0001080 -is_a: UBERON:0005856 {source="EHDAA2"} ! developing mesenchymal condensation -is_a: UBERON:0007530 {source="EHDAA2"} ! migrating mesenchyme population -relationship: develops_from UBERON:0002329 {source="ZFA"} ! somite -relationship: only_in_taxon NCBITaxon:7742 {source="VHOG:0000680"} ! Vertebrata -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png" xsd:anyURI -property_value: UBPROP:0000001 "Skeletogenic portion of somites.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010571", ontology="AAO", source="AAO:EJS"} -property_value: UBPROP:0000003 "The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000680", ontology="VHOG", source="DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000)", source="http://bgee.unil.ch/"} -property_value: UBPROP:0000012 "part_of somite in XAO" xsd:string {external_ontology="XAO"} - [Term] id: UBERON:0003103 name: compound organ @@ -11411,47 +11222,6 @@ relationship: part_of UBERON:0000483 ! epithelium relationship: present_in_taxon NCBITaxon:80999 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} property_value: IAO:0000232 "this class represents a continuous sheet of basement membrane which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal membrane' represents a portion of substance on the scale of a single cell." xsd:string -[Term] -id: UBERON:0005856 -name: developing mesenchymal condensation -namespace: uberon -def: "A delimited region of dense mesenchyme within looser mesenchyme." [AEO:0000148] -synonym: "mesenchyme condensation" EXACT [EMAPA:25351] -xref: AEO:0000148 -xref: EHDAA2_RETIRED:0003148 -xref: EHDAA:8979 -is_a: UBERON:0007524 {source="AEO"} ! dense mesenchyme tissue -is_a: UBERON:0011585 {source="cjm"} ! cell condensation -relationship: composed_primarily_of CL:0000335 {source="AEO-modified-relation"} ! mesenchyme condensation cell - -[Term] -id: UBERON:0005944 -name: axial skeleton plus cranial skeleton -namespace: uberon -def: "Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]." [FMA:71221, https://github.com/obophenotype/uberon/issues/44, https://github.com/obophenotype/uberon/wiki/The-axial-skeleton, VSAO:0000056, Wikipedia:Axial_skeleton] -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -synonym: "skeleton axiale" RELATED LATIN [Wikipedia:Axial_skeleton] -xref: AAO:0000963 -xref: EMAPA:17214 -xref: EMAPA:18043 -xref: MA:0000308 -xref: NCIT:C32172 -xref: SCTID:361725000 -xref: UMLS:C0222645 {source="ncithesaurus:Axial_Skeleton"} -xref: VSAO:0000056 -xref: Wikipedia:Axial_skeleton -xref: XAO:0004011 -is_a: UBERON:0010912 ! subdivision of skeleton -relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system -relationship: develops_from UBERON:0003089 ! sclerotome -relationship: part_of UBERON:0011137 ! axial skeletal system -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg" xsd:anyURI -property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI -property_value: UBPROP:0000001 "Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000056", ontology="VSAO", source="PSPUB:0000170"} - [Term] id: UBERON:0006267 name: notochordal plate @@ -11492,25 +11262,6 @@ is_a: UBERON:0005423 ! developing anatomical structure relationship: develops_from UBERON:0000924 {source="EHDAA2"} ! ectoderm relationship: only_in_taxon NCBITaxon:7711 ! Chordata -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -11744,45 +11495,6 @@ xref: EHDAA2:0003146 is_a: UBERON:0003104 {source="AEO"} ! mesenchyme relationship: has_part CL:0000057 {source="AEO"} ! fibroblast -[Term] -id: UBERON:0007530 -name: migrating mesenchyme population -namespace: uberon -def: "Mesenchymal cells that are migrating." [AEO:JB] -xref: AEO:0000152 -xref: EHDAA2:0003152 -is_a: UBERON:0003104 ! mesenchyme -intersection_of: UBERON:0003104 ! mesenchyme -intersection_of: participates_in GO:0016477 ! cell migration -relationship: participates_in GO:0016477 ! cell migration -property_value: editor_note "this class will be an important part of the NC reorganization" xsd:string - -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0007845 name: regular connective tissue @@ -11898,22 +11610,6 @@ intersection_of: UBERON:0000483 ! epithelium intersection_of: develops_from UBERON:0000924 ! ectoderm relationship: composed_primarily_of CL:0002077 ! ecto-epithelial cell -[Term] -id: UBERON:0010912 -name: subdivision of skeleton -namespace: uberon -def: "Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] -subset: non_informative -synonym: "skeletal subdivision" EXACT [VSAO:0000042] -synonym: "subdivision of skeleton (in vivo)" RELATED [FMA:23879] -xref: FMA:23879 -xref: SCTID:129140006 -xref: VSAO:0000042 -is_a: UBERON:0011216 {source="cjm"} ! organ system subdivision -relationship: part_of UBERON:0000075 {source="UBERONREF:0000003"} ! subdivision of skeletal system -relationship: part_of UBERON:0004288 {source="VSAO"} ! skeleton -property_value: UBPROP:0000001 "Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000042", notes="incorrect", ontology="VSAO", source="VSAO:curator"} - [Term] id: UBERON:0011137 name: axial skeletal system @@ -11922,7 +11618,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -11941,16 +11636,6 @@ relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa relationship: present_in_taxon NCBITaxon:4751 -[Term] -id: UBERON:0011585 -name: cell condensation -namespace: uberon -def: "Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995)." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, PSPUB:0000170, VSAO:0000006] -xref: VSAO:0000006 -xref: XAO:0004021 -is_a: UBERON:0000061 {source="VSAO"} ! anatomical structure -property_value: editor_note "consider obsoleting, coordinate with VSAO" xsd:string - [Term] id: UBERON:0011676 name: subdivision of organism along main body axis @@ -12035,7 +11720,7 @@ xref: NCIT:C32527 xref: UMLS:C0504096 {source="ncithesaurus:Epimysium"} xref: Wikipedia:Epimysium is_a: UBERON:0011822 {source="FMA"} ! dense irregular connective tissue -relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ +relationship: bounding_layer_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: continuous_with UBERON:0000043 ! tendon relationship: part_of UBERON:0001134 {source="FMA"} ! skeletal muscle tissue property_value: UBPROP:0000009 "The Epimysium also protects muscles from friction against other muscles and bones" xsd:string @@ -12133,7 +11818,7 @@ property_value: UBPROP:0000001 "Cardinal body part, which consists of a maximal [Term] id: UBERON:0014892 -name: skeletal muscle organ +name: skeletal muscle organ, vertebrate namespace: uberon def: "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." [GOC:dos] synonym: "skeletal muscle" BROAD [] @@ -12164,6 +11849,7 @@ intersection_of: surrounded_by UBERON:0011899 ! epimysium intersection_of: synapsed_by CL:0000100 ! motor neuron relationship: composed_primarily_of UBERON:0001134 ! skeletal muscle tissue relationship: develops_from UBERON:0003082 ! myotome +relationship: only_in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of UBERON:0018254 ! skeletal musculature relationship: surrounded_by UBERON:0011899 ! epimysium relationship: synapsed_by CL:0000100 ! motor neuron @@ -12298,7 +11984,7 @@ xref: EHDAA2:0001842 xref: EMAPA:35578 xref: MA:0000165 is_a: UBERON:0000061 ! anatomical structure -relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ +relationship: composed_primarily_of UBERON:0014892 ! skeletal muscle organ, vertebrate relationship: part_of UBERON:0000383 {source="MA"} ! musculature of body property_value: editor_note "Added for consistency with MA EMAPA and EHDAA2. See https://github.com/obophenotype/mouse-anatomy-ontology/issues/104" xsd:string @@ -12830,6 +12516,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -13956,6 +13650,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects @@ -14722,7 +14429,6 @@ property_value: IAO:0000232 "The skeleton of a structure may be a true skeleton domain: UBERON:0000061 ! anatomical structure domain: UBERON:0000475 ! organism subdivision range: UBERON:0000465 {IAO:0000116="This should be to a more restricted class, but not the Uberon class may be too restricted since it is a composition-based definition of skeleton rather than functional."} ! material anatomical entity -range: UBERON:0010912 ! subdivision of skeleton is_a: has_part ! has part inverse_of: skeleton_of ! skeleton of is_asymmetric: true diff --git a/subsets/general_cell_types_upper_slim.owl b/subsets/general_cell_types_upper_slim.owl index b0c0834ec..af2ba343e 100644 --- a/subsets/general_cell_types_upper_slim.owl +++ b/subsets/general_cell_types_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4465,6 +4465,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -6382,7 +6413,6 @@ For example, A and B may be gene products and binding of B by A positively regul - Forelimb SubClassOf has_skeleton some 'Forelimb skeleton' A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision. @@ -9177,7 +9207,6 @@ For example, A and B may be gene products and binding of B by A positively regul A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. - BTO:0002606 CALOHA:TS-0415 FBbt:00005144 @@ -9185,7 +9214,6 @@ For example, A and B may be gene products and binding of B by A positively regul neuroglial cell neuroglia - Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell @@ -10251,23 +10279,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. - mesenchyme condensation cell - - - - - A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. - GOC:tfm - PMID:5025404 - - - - @@ -12413,10 +12424,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -15322,35 +15335,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -15425,32 +15409,32 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -16630,27 +16614,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -23692,13 +23655,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -23726,7 +23689,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -23875,7 +23838,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -24061,7 +24024,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -24106,7 +24069,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -24340,13 +24303,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -27653,6 +27616,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -27839,129 +27803,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - - - + + @@ -28012,11 +27859,11 @@ For example, A and B may be gene products and binding of B by A positively regul tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg - + - + @@ -28029,13 +27876,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + OG - + AEO @@ -29032,7 +28879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29068,14 +28915,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -29222,53 +29069,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - - - - - - - - - - - - uberon - UBERON:0000154 - posterior region of body - - - - @@ -29284,19 +29084,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -29369,22 +29162,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -29691,7 +29474,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29733,14 +29516,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -30566,12 +30349,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -30615,6 +30393,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -30995,7 +30783,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -31033,14 +30821,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -31093,7 +30881,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -31130,14 +30918,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -31182,7 +30970,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -31227,7 +31015,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -31240,7 +31028,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -31451,7 +31239,6 @@ For example, A and B may be gene products and binding of B by A positively regul - @@ -31546,8 +31333,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -31583,24 +31370,24 @@ For example, A and B may be gene products and binding of B by A positively regul eye - + - + - + PMID:21062451 - + PMID:21062451 @@ -31735,162 +31522,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -32216,7 +31847,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -32271,14 +31902,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -32366,7 +31997,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -32413,7 +32044,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -32427,7 +32058,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -32755,6 +32386,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -33294,7 +32926,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Skeletal element that is composed of bone tissue. @@ -33344,14 +32976,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone element - + - + VSAO-modified @@ -33462,7 +33094,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -33504,14 +33136,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -34102,7 +33734,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -34138,14 +33770,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -34208,9 +33840,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -34265,15 +33897,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -34292,19 +33924,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -34389,8 +34021,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -34436,11 +34068,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -34453,13 +34085,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -34636,12 +34268,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -34681,66 +34313,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -35095,7 +34727,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35153,14 +34785,14 @@ For example, A and B may be gene products and binding of B by A positively regul bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg - + - + FMA MA @@ -35431,14 +35063,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -35484,24 +35116,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -35967,7 +35599,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -35992,14 +35624,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -36229,9 +35861,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -36263,34 +35895,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -36355,7 +35987,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -36384,7 +36016,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -36397,7 +36029,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -36469,7 +36101,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36513,7 +36145,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -36526,7 +36158,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -36610,7 +36242,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36653,7 +36285,7 @@ For example, A and B may be gene products and binding of B by A positively regul myotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + @@ -36666,7 +36298,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2-abduced @@ -36717,134 +36349,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. - Skeletogenic portion of somites.[AAO] - The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] - part_of somite in XAO - AAO:0010571 - AEO:0000212 - BTO:0006255 - EHDAA2:0003439 - EMAPA:31159 - FMA:295652 - NCIT:C34287 - TAO:0001080 - UMLS:C0183176 - VHOG:0000680 - Wikipedia:Sclerotome - XAO:0000397 - ZFA:0001080 - sclerotomes - uberon - sclerotomus - UBERON:0003089 - - - - sclerotome - http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - - - - - - - - - - - - - - EHDAA2 - - - - - - EHDAA2 - - - - - - VHOG:0000680 - - - - - - ZFA - - - - - Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. - Wikipedia:Sclerotome - XB:curator - https://github.com/obophenotype/uberon/issues/316 - - - - - Skeletogenic portion of somites.[AAO] - 2012-06-20 - AAO:0010571 - AAO - AAO:EJS - - - - - The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] - 2012-09-17 - VHOG:0000680 - VHOG - DOI:10.1073/pnas.97.9.4449 Shimeld SM and Holland PW. Vertebrate innovations. PNAS (2000) - http://bgee.unil.ch/ - - - - - part_of somite in XAO - XAO - - - - - BTO:0006255 - https://orcid.org/0000-0003-4423-4370 - - - - - UMLS:C0183176 - ncithesaurus:Sclerotome - - - - - sclerotomes - TAO:0001080 - - - - - - sclerotomus - Wikipedia:Sclerotome - - - - - @@ -36995,7 +36499,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -37011,14 +36515,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -37346,7 +36850,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The bilaminar epithelium formed from the myotome and dermatome. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768]. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO] @@ -37369,7 +36873,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004290 dermomyotome - + @@ -37388,7 +36892,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 ZFA @@ -37714,7 +37218,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -37728,7 +37232,7 @@ For example, A and B may be gene products and binding of B by A positively regul Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue - + @@ -37741,7 +37245,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + 2012-08-14 VSAO:0000015 VSAO @@ -37780,7 +37284,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -37796,14 +37300,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -37848,7 +37352,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37887,14 +37391,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -38363,7 +37867,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -38379,14 +37883,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -38678,138 +38182,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - A delimited region of dense mesenchyme within looser mesenchyme. - AEO:0000148 - EHDAA2_RETIRED:0003148 - EHDAA:8979 - mesenchyme condensation - uberon - UBERON:0005856 - developing mesenchymal condensation - - - - - - - - - - AEO - - - - - - cjm - - - - - - AEO-modified-relation - - - - - A delimited region of dense mesenchyme within looser mesenchyme. - AEO:0000148 - - - - - mesenchyme condensation - EMAPA:25351 - - - - - - - - - - - - - - - - - - - - - - - - - - - Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. - - Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - AAO:0000963 - EMAPA:17214 - EMAPA:18043 - MA:0000308 - NCIT:C32172 - SCTID:361725000 - UMLS:C0222645 - VSAO:0000056 - Wikipedia:Axial_skeleton - XAO:0004011 - uberon - skeleton axiale - UBERON:0005944 - - - - axial skeleton plus cranial skeleton - http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - http://upload.wikimedia.org/wikipedia/commons/8/8b/Axial_skeleton_diagram.svg - - - - - Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. - FMA:71221 - VSAO:0000056 - Wikipedia:Axial_skeleton - https://github.com/obophenotype/uberon/issues/44 - https://github.com/obophenotype/uberon/wiki/The-axial-skeleton - - - - - Skeletal subdivision of the central body axis including the cranium, vertebrae, notochord, ribs, and sternum.[VSAO] - 2012-08-14 - VSAO:0000056 - VSAO - PSPUB:0000170 - - - - - UMLS:C0222645 - ncithesaurus:Axial_Skeleton - - - - - skeleton axiale - Wikipedia:Axial_skeleton - - - - - @@ -38817,7 +38189,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -38832,7 +38204,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -38845,7 +38217,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -38882,7 +38254,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -38899,14 +38271,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -38924,41 +38296,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -39363,7 +38700,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -39378,14 +38715,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -39475,7 +38812,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39492,14 +38829,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -39598,7 +38935,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39624,7 +38961,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -39640,7 +38977,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -39689,7 +39026,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -39697,7 +39034,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -39710,7 +39047,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -39722,137 +39059,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - Mesenchymal cells that are migrating. - this class will be an important part of the NC reorganization - AEO:0000152 - EHDAA2:0003152 - uberon - UBERON:0007530 - migrating mesenchyme population - - - - - Mesenchymal cells that are migrating. - AEO:JB - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -40020,7 +39226,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40037,14 +39243,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -40066,7 +39272,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -40074,14 +39280,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -40237,82 +39443,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. - Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] - FMA:23879 - SCTID:129140006 - VSAO:0000042 - skeletal subdivision - uberon - subdivision of skeleton (in vivo) - UBERON:0010912 - - subdivision of skeleton - - - - - - - - - - - - - - cjm - - - - - - UBERONREF:0000003 - - - - - - VSAO - - - - - Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. - UBERONREF:0000003 - https://orcid.org/0000-0002-6601-2165 - - - - - Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] - 2012-08-14 - VSAO:0000042 - incorrect - VSAO - VSAO:curator - - - - - skeletal subdivision - VSAO:0000042 - - - - - subdivision of skeleton (in vivo) - FMA:23879 - - - - @@ -40323,12 +39453,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -40389,36 +39513,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). - consider obsoleting, coordinate with VSAO - VSAO:0000006 - XAO:0004021 - uberon - UBERON:0011585 - cell condensation - - - - - - VSAO - - - - - Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). - GO_REF:0000034 - PSPUB:0000170 - VSAO:0000006 - http://dx.plos.org/10.1371/journal.pone.0051070 - - - - @@ -40649,7 +39743,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40674,7 +39768,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0011899 epimysium - + @@ -40687,7 +39781,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -40793,7 +39887,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40815,7 +39909,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0012429 hematopoietic tissue - + @@ -40828,7 +39922,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + defitional @@ -41077,6 +40171,12 @@ For example, A and B may be gene products and binding of B by A positively regul + + + + + + @@ -41118,7 +40218,7 @@ For example, A and B may be gene products and binding of B by A positively regul ZFA:0005277 uberon UBERON:0014892 - skeletal muscle organ + skeletal muscle organ, vertebrate @@ -41398,7 +40498,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41421,7 +40521,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0016887 entire extraembryonic component - + @@ -41434,7 +40534,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -41520,7 +40620,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41536,14 +40636,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal musculature - + - + MA diff --git a/subsets/general_cell_types_upper_slim.tsv b/subsets/general_cell_types_upper_slim.tsv index 50a35634b..75c36b0e2 100644 --- a/subsets/general_cell_types_upper_slim.tsv +++ 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+_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid918 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid925 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid931 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid941 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid951 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid977 +_:B29fb0e95X2D184aX2D4ac6X2D9e6aX2Dbd864e34a507genid993 "continuant" "occurrent" "independent continuant" @@ -337,7 +335,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "stuff accumulating cell" "extracellular matrix secreting cell" "migratory neural crest cell" - "mesenchyme condensation cell" "extraembryonic cell" "epiblast cell" "multi-potent skeletal muscle stem cell" @@ -456,7 +453,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "muscle system process" "circulatory system process" "heart process" - "respiratory system process" "cellular_component" "extracellular region" "collagen trimer" @@ -493,7 +489,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "sensory perception" "visual perception" @@ -840,7 +835,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "processual entity" "sense organ" "tube" - "head" "tendon" "duct" "anatomical wall" @@ -861,8 +855,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "gastrula stage" "neurula stage" "organogenesis stage" - "anterior region of body" - "posterior region of body" "mouth" "blastula" "musculature of body" @@ -890,7 +882,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "endocrine system" "eye" "skeletal joint" - "respiratory system" "digestive system" "circulatory system" "musculature" @@ -934,7 +925,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "paraxial mesoderm" "lateral plate mesoderm" "myotome" - "sclerotome" "compound organ" "mesenchyme" "intraembryonic coelom" @@ -965,11 +955,8 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "developing anatomical structure" "acellular membrane" "basement membrane of epithelium" - "developing mesenchymal condensation" - "axial skeleton plus cranial skeleton" "notochordal plate" "notochordal process" - "pharynx" "presumptive endoderm" "presumptive structure" "presumptive ectoderm" @@ -984,8 +971,6 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "presumptive paraxial mesoderm" "epithelial vesicle" "dense mesenchyme tissue" - "migrating mesenchyme population" - "craniocervical region" "regular connective tissue" "dense regular connective tissue" "entire embryonic mesenchyme" @@ -994,10 +979,8 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "bona-fide anatomical boundary" "germ layer / neural crest" "ecto-epithelium" - "subdivision of skeleton" "axial skeletal system" "organ system subdivision" - "cell condensation" "subdivision of organism along main body axis" "irregular connective tissue" "dense irregular connective tissue" @@ -1010,7 +993,7 @@ _:B42ef10c4X2D463bX2D485dX2Dab76X2D77e9642b3fc8genid994 "anatomical conduit space" "main body axis" "body proper" - "skeletal muscle organ" + "skeletal muscle organ, vertebrate" "non-connected functional system" "glandular system" "lateral structure" diff --git a/subsets/kidney_upper_slim.json b/subsets/kidney_upper_slim.json index 4ac3f393d..f1316cf80 100644 --- a/subsets/kidney_upper_slim.json +++ b/subsets/kidney_upper_slim.json @@ -4,9 +4,9 @@ "meta" : { "basicPropertyValues" : [ { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-12-05" + "val" : "2024-01-04" } ], - "version" : "http://purl.obolibrary.org/obo/cl/releases/2023-12-05/subsets/kidney_upper_slim.owl" + "version" : "http://purl.obolibrary.org/obo/cl/releases/2024-01-04/subsets/kidney_upper_slim.owl" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000002", @@ -2223,6 +2223,7 @@ "xrefs" : [ "GOC:add", "GOC:tfm", "PMID:19022770" ] }, "comments" : [ "Note that this is a class of cell types, not an identified single cell type." ], + "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas" ], "synonyms" : [ { "pred" : "hasBroadSynonym", "val" : "myeloid progenitor cell" @@ -2233,6 +2234,10 @@ "val" : "CALOHA:TS-2099" }, { "val" : "FMA:70339" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0002175", + "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" } ] } }, { @@ -3956,28 +3961,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0003016", - "lbl" : "respiratory system process", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.", - "xrefs" : [ "GOC:dph", "GOC:mtg_cardio", "GOC:tb" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_generic" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "respiratory gaseous exchange" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasAlternativeId", - "val" : "GO:0010802" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0003044", "lbl" : "regulation of systemic arterial blood pressure mediated by a chemical signal", @@ -5509,28 +5492,6 @@ "val" : "biological_process" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/GO_0007585", - "lbl" : "respiratory gaseous exchange by respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.", - "xrefs" : [ "ISBN:0198506732" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/go#goslim_chembl" ], - "synonyms" : [ { - "pred" : "hasBroadSynonym", - "val" : "breathing" - }, { - "pred" : "hasBroadSynonym", - "val" : "respiration" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "biological_process" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/GO_0007586", "lbl" : "digestion", @@ -11626,11 +11587,11 @@ "pred" : "hasExactSynonym", "val" : "Mus" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mice" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11655,7 +11616,7 @@ "pred" : "hasExactSynonym", "val" : "house mouse" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "mouse" } ], @@ -11807,7 +11768,7 @@ "pred" : "hasExactSynonym", "val" : "eucaryotes" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eukaryotes" }, { @@ -11995,7 +11956,7 @@ "pred" : "hasExactSynonym", "val" : "metazoans" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "multicellular animals" }, { @@ -12040,7 +12001,7 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "deuterostomes" } ], @@ -12278,11 +12239,11 @@ "type" : "CLASS", "meta" : { "synonyms" : [ { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "eutherian mammals" }, { - "synonymType" : "http://purl.obolibrary.org/obo/ncbitaxon#common_name", + "synonymType" : "http://purl.obolibrary.org/obo/OMO_0003003", "pred" : "hasExactSynonym", "val" : "placental mammals" }, { @@ -17092,6 +17053,48 @@ "val" : "https://wiki.geneontology.org/Has_output" } ] } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002252", + "lbl" : "connecting branch of", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." + }, + "xrefs" : [ { + "val" : "RO:0002252" + } ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/IAO_0000112", + "val" : "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." + }, { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000050" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val" : "uberon" + }, { + "pred" : "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val" : "connecting_branch_of" + }, { + "pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso", + "val" : "https://github.com/obophenotype/uberon/issues/2212" + } ] + } + }, { + "id" : "http://purl.obolibrary.org/obo/RO_0002253", + "lbl" : "has connecting branch", + "type" : "PROPERTY", + "meta" : { + "definition" : { + "val" : "inverse of connecting branch of" + }, + "subsets" : [ "http://purl.obolibrary.org/obo/RO_0002259" ], + "basicPropertyValues" : [ { + "pred" : "http://purl.obolibrary.org/obo/RO_0004036", + "val" : "http://purl.obolibrary.org/obo/BFO_0000051" + } ] + } }, { "id" : "http://purl.obolibrary.org/obo/RO_0002254", "lbl" : "has developmental contribution from", @@ -20660,6 +20663,9 @@ "xrefs" : [ "span:ProcessualEntity" ] }, "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy", "http://purl.obolibrary.org/obo/uberon/core#upper_level" ], + "xrefs" : [ { + "val" : "BFO:0000003" + } ], "basicPropertyValues" : [ { "pred" : "http://purl.obolibrary.org/obo/RO_0002175", "val" : "http://purl.obolibrary.org/obo/NCBITaxon_33090" @@ -20785,102 +20791,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "lbl" : "head", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The head is the anterior-most division of the body [GO].", - "xrefs" : [ "GO:0060322", "Wikipedia:Head" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "head (volume)", - "xrefs" : [ "FMA:7154" ] - }, { - "pred" : "hasNarrowSynonym", - "val" : "adult head" - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "SPD:0000016" ] - } ], - "xrefs" : [ { - "val" : "AAO:0010335" - }, { - "val" : "AEO:0000106" - }, { - "val" : "BILA:0000115" - }, { - "val" : "BIRNLEX:1230" - }, { - "val" : "BTO:0000282" - }, { - "val" : "CALOHA:TS-0436" - }, { - "val" : "EFO:0000964" - }, { - "val" : "EHDAA2:0003106" - }, { - "val" : "EMAPA:31858" - }, { - "val" : "FMA:7154" - }, { - "val" : "GAID:61" - }, { - "val" : "HAO:0000397" - }, { - "val" : "MA:0000023" - }, { - "val" : "MAT:0000294" - }, { - "val" : "MESH:D006257" - }, { - "val" : "MIAA:0000294" - }, { - "val" : "NCIT:C12419" - }, { - "val" : "SCTID:302548004" - }, { - "val" : "SPD:0000016" - }, { - "val" : "TAO:0001114" - }, { - "val" : "TGMA:0000002" - }, { - "val" : "UMLS:C0018670" - }, { - "val" : "VHOG:0001644" - }, { - "val" : "WBbt:0005739" - }, { - "val" : "Wikipedia:Head" - }, { - "val" : "XAO:0003024" - }, { - "val" : "ZFA:0001114" - }, { - "val" : "galen:Head" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002171", - "val" : "http://purl.obolibrary.org/obo/UBERON_0000948" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000055", "lbl" : "vessel", @@ -22447,16 +22357,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "lbl" : "anterior region of body", - "type" : "CLASS", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0000154", "lbl" : "posterior region of body", @@ -25645,116 +25545,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "lbl" : "respiratory system", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "Functional system which consists of structures involved in respiration.", - "xrefs" : [ "Wikipedia:Respiratory_system", "http://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#efo_slim", "http://purl.obolibrary.org/obo/uberon/core#functional_classification", "http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas", "http://purl.obolibrary.org/obo/uberon/core#pheno_slim", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim", "http://purl.obolibrary.org/obo/uberon/core#vertebrate_core" ], - "synonyms" : [ { - "pred" : "hasExactSynonym", - "val" : "apparatus respiratorius" - }, { - "pred" : "hasExactSynonym", - "val" : "respiratory system" - }, { - "pred" : "hasRelatedSynonym", - "val" : "Atmungssystem", - "xrefs" : [ "BTO:0000203" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "apparatus respiratorius", - "xrefs" : [ "BTO:0000203" ] - }, { - "synonymType" : "http://purl.obolibrary.org/obo/uberon/core#LATIN", - "pred" : "hasRelatedSynonym", - "val" : "systema respiratorium", - "xrefs" : [ "Wikipedia:Respiratory_system" ] - } ], - "xrefs" : [ { - "val" : "AAO:0000541" - }, { - "val" : "BTO:0000203" - }, { - "val" : "CALOHA:TS-1319" - }, { - "val" : "EFO:0000804" - }, { - "val" : "EHDAA2:0001604" - }, { - "val" : "EHDAA:2203" - }, { - "val" : "EMAPA:16727" - }, { - "val" : "EV:0100036" - }, { - "val" : "FMA:7158" - }, { - "val" : "GAID:78" - }, { - "val" : "MA:0000327" - }, { - "val" : "MAT:0000030" - }, { - "val" : "MESH:D012137" - }, { - "val" : "MIAA:0000030" - }, { - "val" : "NCIT:C12779" - }, { - "val" : "SCTID:278197002" - }, { - "val" : "TAO:0000272" - }, { - "val" : "UMLS:C0035237" - }, { - "val" : "VHOG:0000202" - }, { - "val" : "Wikipedia:Respiratory_system" - }, { - "val" : "XAO:0000117" - }, { - "val" : "ZFA:0000272" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/RO_0002161", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_147099" - }, { - "pred" : "http://purl.obolibrary.org/obo/RO_0002175", - "val" : "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000001", - "val" : "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000003", - "val" : "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" - }, { - "pred" : "http://xmlns.com/foaf/0.1/depiction", - "val" : "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0001007", "lbl" : "digestive system", @@ -26679,6 +26469,8 @@ "val" : "AAO:0010841" }, { "val" : "AEO:0000000" + }, { + "val" : "BFO:0000004" }, { "val" : "BILA:0000000" }, { @@ -36388,47 +36180,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "lbl" : "pharynx", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The pharynx is the part of the digestive system immediately posterior to the mouth[GO].", - "xrefs" : [ "GO:0060465" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#grouping_class", "http://purl.obolibrary.org/obo/uberon/core#uberon_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "anterior part of foregut" - }, { - "pred" : "hasRelatedSynonym", - "val" : "pharyngeal tube" - } ], - "xrefs" : [ { - "val" : "MAT:0000049" - }, { - "val" : "MESH:D010614" - }, { - "val" : "MIAA:0000049" - } ], - "basicPropertyValues" : [ { - "pred" : "http://purl.obolibrary.org/obo/IAO_0000232", - "val" : "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." - }, { - "pred" : "http://purl.obolibrary.org/obo/IAO_0006012", - "val" : "2023-04-20" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "branchial" - }, { - "pred" : "http://purl.obolibrary.org/obo/UBPROP_0000007", - "val" : "pharyngeal" - }, { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0006595", "lbl" : "presumptive endoderm", @@ -37286,60 +37037,6 @@ "val" : "uberon" } ] } - }, { - "id" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "lbl" : "craniocervical region", - "type" : "CLASS", - "meta" : { - "definition" : { - "val" : "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae.", - "xrefs" : [ "https://orcid.org/0000-0002-6601-2165" ] - }, - "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#pheno_slim" ], - "synonyms" : [ { - "pred" : "hasRelatedSynonym", - "val" : "cephalic area", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic part of animal", - "xrefs" : [ "Wikipedia:Head" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "cephalic region", - "xrefs" : [ "https://github.com/obophenotype/uberon/issues/379" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head and neck", - "xrefs" : [ "FMA:280881" ] - }, { - "pred" : "hasRelatedSynonym", - "val" : "head or neck" - } ], - "xrefs" : [ { - "val" : "CALOHA:TS-2356" - }, { - "val" : "EV:0100009" - }, { - "val" : "FMA:280881" - }, { - "val" : "MA:0000006" - }, { - "val" : "NCIT:C12418" - }, { - "val" : "SCTID:361355005" - }, { - "val" : "UMLS:C0460004" - }, { - "val" : "WikipediaCategory:Head_and_neck" - }, { - "val" : "galen:HeadAndNeck" - } ], - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", - "val" : "uberon" - } ] - } }, { "id" : "http://purl.obolibrary.org/obo/UBERON_0007823", "lbl" : "appendage girdle region", @@ -39331,8 +39028,6 @@ "subsets" : [ "http://purl.obolibrary.org/obo/uberon/core#common_anatomy" ], "xrefs" : [ { "val" : "AAO:0010270" - }, { - "val" : "AEO:0000154" }, { "val" : "ZFA:0005594" } ], @@ -42175,14 +41870,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0003014", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0003008" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0003016", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0003044", "pred" : "is_a", @@ -42685,10 +42372,6 @@ "sub" : "http://purl.obolibrary.org/obo/GO_0007498", "pred" : "http://purl.obolibrary.org/obo/RO_0002296", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000926" - }, { - "sub" : "http://purl.obolibrary.org/obo/GO_0007585", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/GO_0032501" }, { "sub" : "http://purl.obolibrary.org/obo/GO_0007586", "pred" : "is_a", @@ -45061,18 +44744,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000026", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0011676" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0007811" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000033", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000055", "pred" : "is_a", @@ -45639,18 +45310,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000119", "pred" : "is_a", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000957" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/BSPO_0000096", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000154" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000153", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000154", "pred" : "is_a", @@ -45767,24 +45426,10 @@ "val" : "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/BSPO_0001106", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001555" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", - "pred" : "http://purl.obolibrary.org/obo/RO_0002131", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#notes", - "val" : "exceptions in some taxa" - } ] - } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000165", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", @@ -46058,7 +45703,13 @@ }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_6072" + "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33208", + "meta" : { + "basicPropertyValues" : [ { + "pred" : "http://www.geneontology.org/formats/oboInOwl#source", + "val" : "http://palaeos.com/metazoa/porifera/homoscleromorpha.html" + } ] + } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0000483", "pred" : "http://purl.obolibrary.org/obo/RO_0002473", @@ -46365,26 +46016,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0000991", "pred" : "http://purl.obolibrary.org/obo/RO_0002202", "obj" : "http://purl.obolibrary.org/obo/UBERON_0005564" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000467" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0003016" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002215", - "obj" : "http://purl.obolibrary.org/obo/GO_0007585" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "pred" : "http://purl.obolibrary.org/obo/RO_0002492", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000066" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001007", "pred" : "is_a", @@ -47182,7 +46813,7 @@ } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001552", - "pred" : "http://purl.obolibrary.org/obo/RO_0002380", + "pred" : "http://purl.obolibrary.org/obo/RO_0002252", "obj" : "http://purl.obolibrary.org/obo/UBERON_0009885" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0001555", @@ -49182,7 +48813,7 @@ } }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0004639", - "pred" : "http://purl.obolibrary.org/obo/RO_0002380", + "pred" : "http://purl.obolibrary.org/obo/RO_0002252", "obj" : "http://purl.obolibrary.org/obo/UBERON_0004723" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0004639", @@ -50073,14 +49704,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0006555", "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", "obj" : "http://purl.obolibrary.org/obo/UBERON_0001008" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0004921" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0006562", - "pred" : "http://purl.obolibrary.org/obo/RO_0002160", - "obj" : "http://purl.obolibrary.org/obo/NCBITaxon_33213" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0006595", "pred" : "is_a", @@ -50499,32 +50122,6 @@ "val" : "MA" } ] } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "is_a", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000475", - "meta" : { - "basicPropertyValues" : [ { - "pred" : "http://www.geneontology.org/formats/oboInOwl#source", - "val" : "MA" - } ] - } - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000153" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000050", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0013702" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0000033" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0007811", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0006562" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0007823", "pred" : "is_a", @@ -51009,10 +50606,6 @@ "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", "obj" : "http://purl.obolibrary.org/obo/UBERON_0000982" - }, { - "sub" : "http://purl.obolibrary.org/obo/UBERON_0011137", - "pred" : "http://purl.obolibrary.org/obo/BFO_0000051", - "obj" : "http://purl.obolibrary.org/obo/UBERON_0005944" }, { "sub" : "http://purl.obolibrary.org/obo/UBERON_0011138", "pred" : "is_a", @@ -51961,6 +51554,18 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "subPropertyOf", "obj" : "http://purl.obolibrary.org/obo/RO_0000057" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002170" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002253", + "pred" : "subPropertyOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002375" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "subPropertyOf", @@ -52917,6 +52522,10 @@ "sub" : "http://purl.obolibrary.org/obo/RO_0002234", "pred" : "inverseOf", "obj" : "http://purl.obolibrary.org/obo/RO_0002353" + }, { + "sub" : "http://purl.obolibrary.org/obo/RO_0002252", + "pred" : "inverseOf", + "obj" : "http://purl.obolibrary.org/obo/RO_0002253" }, { "sub" : "http://purl.obolibrary.org/obo/RO_0002254", "pred" : "inverseOf", @@ -54986,13 +54595,6 @@ "propertyId" : "http://purl.obolibrary.org/obo/BFO_0000051", "fillerId" : "http://purl.obolibrary.org/obo/CL_0000586" } ] - }, { - "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001004", - "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], - "restrictions" : [ { - "propertyId" : "http://purl.obolibrary.org/obo/RO_0002215", - "fillerId" : "http://purl.obolibrary.org/obo/GO_0007585" - } ] }, { "definedClassId" : "http://purl.obolibrary.org/obo/UBERON_0001007", "genusIds" : [ "http://purl.obolibrary.org/obo/UBERON_0000467" ], diff --git a/subsets/kidney_upper_slim.obo b/subsets/kidney_upper_slim.obo index 0297d6c99..b7ccbe436 100644 --- a/subsets/kidney_upper_slim.obo +++ b/subsets/kidney_upper_slim.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: cl/releases/2023-12-05/subsets/kidney_upper_slim.owl +data-version: cl/releases/2024-01-04/subsets/kidney_upper_slim.owl subsetdef: abnormal_slim "" subsetdef: added_for_HCA "" subsetdef: attribute_slim "" @@ -60,7 +60,6 @@ subsetdef: upper_level "" subsetdef: value_slim "" subsetdef: vertebrate_core "" synonymtypedef: blast_name "" -synonymtypedef: common_name "" synonymtypedef: COMPARATIVE_PREFERRED "" synonymtypedef: DEPRECATED "" synonymtypedef: DUBIOUS "" @@ -77,6 +76,7 @@ synonymtypedef: LATIN "latin term" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_MAMMAL "" synonymtypedef: OMO:0003000 "abbreviation" +synonymtypedef: OMO:0003003 "" synonymtypedef: OMO:0003004 "plural form" synonymtypedef: PENDING_REVIEW "" synonymtypedef: PLURAL "plural term" @@ -88,7 +88,7 @@ synonymtypedef: synonym "" synonymtypedef: SYSTEMATIC "" synonymtypedef: systematic_synonym "" ontology: cl/subsets/kidney_upper_slim -property_value: owl:versionInfo "2023-12-05" xsd:string +property_value: owl:versionInfo "2024-01-04" xsd:string [Term] id: BFO:0000002 @@ -1202,6 +1202,7 @@ id: CL:0000839 name: myeloid lineage restricted progenitor cell def: "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] comment: Note that this is a class of cell types, not an identified single cell type. +subset: human_reference_atlas synonym: "myeloid progenitor cell" BROAD [] xref: BTO:0004730 xref: CALOHA:TS-2099 @@ -1211,6 +1212,7 @@ is_a: CL:0011026 ! progenitor cell intersection_of: CL:0002031 ! hematopoietic lineage restricted progenitor cell intersection_of: capable_of GO:0030099 ! myeloid cell differentiation relationship: capable_of GO:0030099 ! myeloid cell differentiation +relationship: present_in_taxon NCBITaxon:9606 [Term] id: CL:0000988 @@ -2291,17 +2293,6 @@ synonym: "excretory system process" EXACT [] synonym: "kidney system process" RELATED [] is_a: GO:0003008 ! system process -[Term] -id: GO:0003016 -name: respiratory system process -namespace: biological_process -alt_id: GO:0010802 -def: "A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange." [GOC:dph, GOC:mtg_cardio, GOC:tb] -subset: goslim_generic -synonym: "respiratory gaseous exchange" EXACT [] -is_a: GO:0003008 ! system process -relationship: part_of GO:0007585 ! respiratory gaseous exchange by respiratory system - [Term] id: GO:0003044 name: regulation of systemic arterial blood pressure mediated by a chemical signal @@ -3194,16 +3185,6 @@ intersection_of: GO:0048856 ! anatomical structure development intersection_of: results_in_development_of UBERON:0000926 ! mesoderm relationship: results_in_development_of UBERON:0000926 ! mesoderm -[Term] -id: GO:0007585 -name: respiratory gaseous exchange by respiratory system -namespace: biological_process -def: "The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms." [ISBN:0198506732] -subset: goslim_chembl -synonym: "breathing" BROAD [] -synonym: "respiration" BROAD [] -is_a: GO:0032501 ! multicellular organismal process - [Term] id: GO:0007586 name: digestion @@ -6237,8 +6218,8 @@ property_value: has_rank NCBITaxon:family id: NCBITaxon:10088 name: Mus namespace: ncbi_taxonomy -synonym: "mice" EXACT common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mice" EXACT OMO:0003003 [] +synonym: "mouse" EXACT OMO:0003003 [] synonym: "Mus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:39107 ! Murinae @@ -6250,7 +6231,7 @@ name: Mus musculus namespace: ncbi_taxonomy alt_id: NCBITaxon:85055 synonym: "house mouse" EXACT genbank_common_name [] -synonym: "mouse" EXACT common_name [] +synonym: "mouse" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:862507 ! Mus property_value: has_rank NCBITaxon:species @@ -6319,7 +6300,7 @@ synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] -synonym: "eukaryotes" EXACT common_name [] +synonym: "eukaryotes" EXACT OMO:0003003 [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 @@ -6395,7 +6376,7 @@ namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] -synonym: "multicellular animals" EXACT common_name [] +synonym: "multicellular animals" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom @@ -6412,7 +6393,7 @@ property_value: has_rank NCBITaxon:clade id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy -synonym: "deuterostomes" EXACT common_name [] +synonym: "deuterostomes" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade @@ -6515,8 +6496,8 @@ property_value: has_rank NCBITaxon:subphylum id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy -synonym: "eutherian mammals" EXACT common_name [] -synonym: "placental mammals" EXACT common_name [] +synonym: "eutherian mammals" EXACT OMO:0003003 [] +synonym: "placental mammals" EXACT OMO:0003003 [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] @@ -7571,6 +7552,7 @@ namespace: uberon def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] subset: common_anatomy subset: upper_level +xref: BFO:0000003 disjoint_from: UBERON:0001062 ! anatomical entity relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -7629,54 +7611,6 @@ property_value: UBPROP:0000001 "Organ or organ part that is attached to the body property_value: UBPROP:0000007 "appendicular" xsd:string property_value: UBPROP:0000008 "this is currently a subtype of organism subdivision - which would exclude feathers" xsd:string -[Term] -id: UBERON:0000033 -name: head -namespace: uberon -def: "The head is the anterior-most division of the body [GO]." [GO:0060322, Wikipedia:Head] -subset: efo_slim -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "adult head" NARROW [] -synonym: "cephalic area" RELATED [SPD:0000016] -synonym: "head (volume)" EXACT [FMA:7154] -xref: AAO:0010335 -xref: AEO:0000106 -xref: BILA:0000115 -xref: BIRNLEX:1230 -xref: BTO:0000282 -xref: CALOHA:TS-0436 -xref: EFO:0000964 -xref: EHDAA2:0003106 -xref: EMAPA:31858 -xref: FMA:7154 -xref: GAID:61 -xref: galen:Head -xref: HAO:0000397 -xref: MA:0000023 -xref: MAT:0000294 -xref: MESH:D006257 -xref: MIAA:0000294 -xref: NCIT:C12419 -xref: SCTID:302548004 -xref: SPD:0000016 -xref: TAO:0001114 -xref: TGMA:0000002 -xref: UMLS:C0018670 {source="ncithesaurus:Head", source="BIRNLEX:1230"} -xref: VHOG:0001644 -xref: WBbt:0005739 -xref: Wikipedia:Head -xref: XAO:0003024 -xref: ZFA:0001114 -is_a: UBERON:0011676 ! subdivision of organism along main body axis -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: part_of UBERON:0007811 ! craniocervical region -property_value: RO:0002171 UBERON:0000948 -property_value: UBPROP:0000001 "Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010335", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000001 "Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001114", ontology="TAO", source="ZFIN:curator"} -property_value: UBPROP:0000003 "Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001644", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0000055 name: vessel @@ -8457,15 +8391,6 @@ xref: NCIT:C66831 is_a: UBERON:0000957 ! lamina property_value: editor_note "consider adding to caro" xsd:string -[Term] -id: UBERON:0000153 -name: anterior region of body -namespace: uberon -is_a: UBERON:0000475 ! organism subdivision -disjoint_from: UBERON:0000154 {source="lexical"} ! posterior region of body -relationship: anterior_to UBERON:0000154 ! posterior region of body -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria - [Term] id: UBERON:0000154 name: posterior region of body @@ -8637,8 +8562,6 @@ intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa -relationship: overlaps UBERON:0001004 {notes="exceptions in some taxa"} ! respiratory system -relationship: part_of UBERON:0000033 ! head relationship: proximalmost_part_of UBERON:0001555 ! digestive tract property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI @@ -9313,7 +9236,7 @@ intersection_of: composed_primarily_of CL:0000066 ! epithelial cell relationship: composed_primarily_of CL:0000066 ! epithelial cell relationship: has_part GO:0005911 ! cell-cell junction relationship: has_part UBERON:0005769 ! basement membrane of epithelium -relationship: only_in_taxon NCBITaxon:6072 ! Eumetazoa +relationship: only_in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI property_value: UBPROP:0000003 "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "epithelial" xsd:string @@ -9964,7 +9887,6 @@ xref: ZFA:0000632 is_a: UBERON:0000467 ! anatomical system intersection_of: UBERON:0000467 ! anatomical system intersection_of: capable_of_part_of GO:0000003 ! reproduction -disjoint_from: UBERON:0001004 ! respiratory system disjoint_from: UBERON:0001007 ! digestive system disjoint_from: UBERON:0001009 ! circulatory system disjoint_from: UBERON:0001016 ! nervous system @@ -10026,69 +9948,6 @@ property_value: UBPROP:0000003 "Examination of different vertebrate species show property_value: UBPROP:0000007 "gonadal" xsd:string property_value: UBPROP:0000012 "FMA xref is a 'general anatomical term'" xsd:string {external_ontology="FMA"} -[Term] -id: UBERON:0001004 -name: respiratory system -namespace: uberon -def: "Functional system which consists of structures involved in respiration." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Respiratory_system] -subset: efo_slim -subset: functional_classification -subset: human_reference_atlas -subset: pheno_slim -subset: uberon_slim -subset: vertebrate_core -synonym: "apparatus respiratorius" EXACT [] -synonym: "apparatus respiratorius" RELATED [BTO:0000203] -synonym: "Atmungssystem" RELATED [BTO:0000203] -synonym: "respiratory system" EXACT [] -synonym: "systema respiratorium" RELATED LATIN [Wikipedia:Respiratory_system] -xref: AAO:0000541 -xref: BTO:0000203 -xref: CALOHA:TS-1319 -xref: EFO:0000804 -xref: EHDAA2:0001604 -xref: EHDAA:2203 -xref: EMAPA:16727 -xref: EV:0100036 -xref: FMA:7158 -xref: GAID:78 -xref: MA:0000327 -xref: MAT:0000030 -xref: MESH:D012137 -xref: MIAA:0000030 -xref: NCIT:C12779 -xref: SCTID:278197002 -xref: TAO:0000272 -xref: UMLS:C0035237 {source="ncithesaurus:Respiratory_System"} -xref: VHOG:0000202 -xref: Wikipedia:Respiratory_system -xref: XAO:0000117 -xref: ZFA:0000272 -is_a: UBERON:0000467 ! anatomical system -intersection_of: UBERON:0000467 ! anatomical system -intersection_of: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -disjoint_from: UBERON:0001007 ! digestive system -disjoint_from: UBERON:0001009 ! circulatory system -disjoint_from: UBERON:0001016 ! nervous system -disjoint_from: UBERON:0001434 ! skeletal system -disjoint_from: UBERON:0002204 ! musculoskeletal system -disjoint_from: UBERON:0002390 ! hematopoietic system -disjoint_from: UBERON:8450002 ! excretory system -relationship: capable_of GO:0003016 ! respiratory system process -relationship: capable_of GO:0007585 ! respiratory gaseous exchange by respiratory system -relationship: existence_ends_during UBERON:0000066 ! fully formed stage -relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"} -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -relationship: present_in_taxon NCBITaxon:9606 -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb" xsd:anyURI -property_value: depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb" xsd:anyURI -property_value: UBPROP:0000001 "The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000541", ontology="AAO", source="AAO:BJB"} -property_value: UBPROP:0000003 "There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000202", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23", source="http://bgee.unil.ch/"} - [Term] id: UBERON:0001007 name: digestive system @@ -10563,6 +10422,7 @@ subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 +xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 @@ -11364,7 +11224,7 @@ xref: MA:0002583 xref: Wikipedia:Arcuate_arteries_of_the_kidney is_a: UBERON:0001637 ! artery is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0009885 ! interlobar artery +relationship: connecting_branch_of UBERON:0009885 ! interlobar artery relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney relationship: present_in_taxon NCBITaxon:9606 property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg" xsd:anyURI @@ -14288,8 +14148,8 @@ xref: ZFA:0005307 is_a: UBERON:0001637 ! artery is_a: UBERON:0001980 ! arteriole is_a: UBERON:0003644 ! kidney arterial blood vessel -relationship: branching_part_of UBERON:0004723 ! interlobular artery relationship: capable_of GO:0003093 {source="Wikipedia"} ! regulation of glomerular filtration +relationship: connecting_branch_of UBERON:0004723 ! interlobular artery relationship: contributes_to_morphology_of UBERON:0001229 ! renal corpuscle relationship: part_of UBERON:0001229 ! renal corpuscle relationship: present_in_taxon NCBITaxon:9606 @@ -15454,25 +15314,6 @@ intersection_of: UBERON:0000025 ! tube intersection_of: part_of UBERON:0001008 ! renal system relationship: part_of UBERON:0001008 ! renal system -[Term] -id: UBERON:0006562 -name: pharynx -namespace: uberon -def: "The pharynx is the part of the digestive system immediately posterior to the mouth[GO]." [GO:0060465] -subset: grouping_class -subset: uberon_slim -synonym: "anterior part of foregut" RELATED [] -synonym: "pharyngeal tube" RELATED [] -xref: MAT:0000049 -xref: MESH:D010614 -xref: MIAA:0000049 -is_a: UBERON:0004921 ! subdivision of digestive tract -relationship: only_in_taxon NCBITaxon:33213 ! Bilateria -property_value: IAO:0000232 "currently this is an extremely generic class, encompassing both protostomes and deuterostomes." xsd:string -property_value: IAO:0006012 "2023-04-20" xsd:string -property_value: UBPROP:0000007 "branchial" xsd:string -property_value: UBPROP:0000007 "pharyngeal" xsd:string - [Term] id: UBERON:0006595 name: presumptive endoderm @@ -15949,32 +15790,6 @@ property_value: editor_note "consider merging with vasculature" xsd:string property_value: UBPROP:0000001 "The cardiovascular and lymphatic systems, collectively[ncithesaurus:Vascular_System]." xsd:string {source="ncithesaurus:Vascular_System"} property_value: UBPROP:0000012 "in both MA and BTO, the arterial system and venous sytem are subtypes of the vascular system" xsd:string {external_ontology="MA"} -[Term] -id: UBERON:0007811 -name: craniocervical region -namespace: uberon -def: "The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [https://orcid.org/0000-0002-6601-2165] -subset: pheno_slim -synonym: "cephalic area" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "cephalic part of animal" RELATED [Wikipedia:Head] -synonym: "cephalic region" RELATED [https://github.com/obophenotype/uberon/issues/379] -synonym: "head and neck" RELATED [FMA:280881] -synonym: "head or neck" RELATED [] -xref: CALOHA:TS-2356 -xref: EV:0100009 -xref: FMA:280881 -xref: galen:HeadAndNeck -xref: MA:0000006 -xref: NCIT:C12418 -xref: SCTID:361355005 -xref: UMLS:C0460004 {source="ncithesaurus:Head_and_Neck"} -xref: WikipediaCategory:Head_and_neck -is_a: UBERON:0000475 {source="MA"} ! organism subdivision -relationship: has_part UBERON:0000033 ! head -relationship: has_part UBERON:0006562 ! pharynx -relationship: part_of UBERON:0000153 ! anterior region of body -relationship: part_of UBERON:0013702 ! body proper - [Term] id: UBERON:0007823 name: appendage girdle region @@ -16456,7 +16271,6 @@ def: "Subdivision of the skeletal system which consists of the axial skeleton pl xref: FMA:7483 is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system relationship: has_part UBERON:0000982 ! skeletal joint -relationship: has_part UBERON:0005944 ! axial skeleton plus cranial skeleton property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI [Term] @@ -17003,7 +16817,6 @@ namespace: uberon def: "Material anatomical entity that forms the outermost boundary of an anatomical structure." [https://github.com/obophenotype/uberon/issues/1324] subset: common_anatomy xref: AAO:0010270 -xref: AEO:0000154 xref: ZFA:0005594 is_a: UBERON:0000465 ! material anatomical entity relationship: bounding_layer_of UBERON:0000061 ! anatomical structure @@ -17490,6 +17303,14 @@ property_value: IAO:0000232 "Do not use this relation directly. It is ended as a domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent +[Typedef] +id: RO:0002253 +name: has connecting branch +def: "inverse of connecting branch of" [] +subset: RO:0002259 +property_value: RO:0004036 BFO:0000051 +is_a: RO:0002375 ! in branching relationship with + [Typedef] id: RO:0002255 name: developmentally contributes to @@ -18615,6 +18436,19 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Connectivit property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-articulations-Design-Pattern" xsd:anyURI is_a: RO:0002323 ! mereotopologically related to +[Typedef] +id: connecting_branch_of +name: connecting branch of +namespace: uberon +def: "b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t." [] +xref: RO:0002252 +property_value: IAO:0000112 "In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1." xsd:string +property_value: RO:0004036 BFO:0000050 +property_value: seeAlso https://github.com/obophenotype/uberon/issues/2212 +is_a: connected_to ! connected to +is_a: RO:0002375 ! in branching relationship with +inverse_of: RO:0002253 ! has connecting branch + [Typedef] id: connects name: connects diff --git a/subsets/kidney_upper_slim.owl b/subsets/kidney_upper_slim.owl index 910784e47..a5d1fc86e 100644 --- a/subsets/kidney_upper_slim.owl +++ b/subsets/kidney_upper_slim.owl @@ -29,8 +29,8 @@ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#" xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"> - - 2023-12-05 + + 2024-01-04 @@ -315,6 +315,14 @@ Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some ( + + + + + + + + @@ -886,14 +894,6 @@ WHERE { - - - - - - - - @@ -4478,6 +4478,37 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. + + + + + + In the tree T depicted in https://oborel.github.io/obo-relations/branching_part_of.png, B1 is connecting branch of S, and B1-1 as a connecting branch of B1. + b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. + + RO:0002252 + uberon + connecting_branch_of + connecting_branch_of + connecting branch of + + + + + + + + + + inverse of connecting branch of + + + has connecting branch + + + + @@ -11363,10 +11394,12 @@ For example, A and B may be gene products and binding of B by A positively regul A progenitor cell restricted to the myeloid lineage. + myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 + Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell @@ -14495,35 +14528,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GO:0010802 - respiratory gaseous exchange - biological_process - GO:0003016 - - respiratory system process - - - - - A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. - GOC:dph - GOC:mtg_cardio - GOC:tb - - - - @@ -14863,32 +14867,32 @@ For example, A and B may be gene products and binding of B by A positively regul + - A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer - + - + - + PMID:12382326 - + PMID:12382326 @@ -16677,27 +16681,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - breathing - respiration - biological_process - GO:0007585 - - respiratory gaseous exchange by respiratory system - - - - - The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. - ISBN:0198506732 - - - - @@ -24999,13 +24982,13 @@ For example, A and B may be gene products and binding of B by A positively regul mice - + mouse - + @@ -25033,7 +25016,7 @@ For example, A and B may be gene products and binding of B by A positively regul mouse - + @@ -25182,7 +25165,7 @@ For example, A and B may be gene products and binding of B by A positively regul eukaryotes - + @@ -25368,7 +25351,7 @@ For example, A and B may be gene products and binding of B by A positively regul multicellular animals - + @@ -25413,7 +25396,7 @@ For example, A and B may be gene products and binding of B by A positively regul deuterostomes - + @@ -25647,13 +25630,13 @@ For example, A and B may be gene products and binding of B by A positively regul eutherian mammals - + placental mammals - + @@ -28137,6 +28120,7 @@ For example, A and B may be gene products and binding of B by A positively regul + BFO:0000003 uberon UBERON:0000000 @@ -28294,123 +28278,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - The head is the anterior-most division of the body [GO]. - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - AAO:0010335 - AEO:0000106 - BILA:0000115 - BIRNLEX:1230 - BTO:0000282 - CALOHA:TS-0436 - EFO:0000964 - EHDAA2:0003106 - EMAPA:31858 - FMA:7154 - GAID:61 - HAO:0000397 - MA:0000023 - MAT:0000294 - MESH:D006257 - MIAA:0000294 - NCIT:C12419 - SCTID:302548004 - SPD:0000016 - TAO:0001114 - TGMA:0000002 - UMLS:C0018670 - VHOG:0001644 - WBbt:0005739 - Wikipedia:Head - XAO:0003024 - ZFA:0001114 - galen:Head - head (volume) - adult head - uberon - cephalic area - UBERON:0000033 - - - - - head - - - - - The head is the anterior-most division of the body [GO]. - GO:0060322 - Wikipedia:Head - - - - - Organism subdivision that is the part of the body consisting of the cranial and pharyngeal regions.[AAO] - 2012-06-20 - AAO:0010335 - AAO - AAO:BJB - - - - - Organism subdivision which is the part of the body which consists of the cranial and pharygeal regions.[TAO] - 2012-08-14 - TAO:0001114 - TAO - ZFIN:curator - - - - - Vertebrate evolution has been characterized by a fresh and vast array of cranial structures that collectively form the head.[well established][VHOG] - 2012-09-17 - VHOG:0001644 - VHOG - ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.82 - http://bgee.unil.ch/ - - - - - UMLS:C0018670 - BIRNLEX:1230 - ncithesaurus:Head - - - - - head (volume) - FMA:7154 - - - - - cephalic area - SPD:0000016 - - - - @@ -28458,7 +28325,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -28518,14 +28385,14 @@ For example, A and B may be gene products and binding of B by A positively regul ureter https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + GO @@ -28597,8 +28464,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -28648,25 +28515,25 @@ For example, A and B may be gene products and binding of B by A positively regul urethra https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png - + - + - + pelvic part of UG sinus gives rise to prostatic and membranous parts of urethra Wikipedia - + Wikipedia @@ -29213,7 +29080,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -29264,14 +29131,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + FMA MA @@ -29568,15 +29435,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + @@ -29612,34 +29479,34 @@ For example, A and B may be gene products and binding of B by A positively regul metanephros - + - + - + - + definitional - + GO - + ISBN:9780878932504 @@ -29796,8 +29663,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + An epithelial swelling on the Wolffian duct that elongates to invade the adjacent metanephric mesenchyme[MP]. Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts. [Embryology, See_Dudek_RW_and_Fix_JD, Third_Edition_(2004)_Philadelphia:_Lippincott_William_and_Wilkins, p.137][VHOG] Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts[VHOG:0000541]. @@ -29824,11 +29691,11 @@ For example, A and B may be gene products and binding of B by A positively regul ureteric bud - + - + @@ -29841,13 +29708,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 - + ISBN:9780878932504 @@ -30280,7 +30147,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -30316,14 +30183,14 @@ For example, A and B may be gene products and binding of B by A positively regul gastrula stage - + - + BILS @@ -30501,36 +30368,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - uberon - UBERON:0000153 - anterior region of body - - - - - - lexical - - - - @@ -30631,8 +30468,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -30665,24 +30502,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0000162 cloaca - + - + - + ZFA - + AAO @@ -30764,8 +30601,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -30784,24 +30621,24 @@ For example, A and B may be gene products and binding of B by A positively regul embryonic cloaca - + - + - + EHDAA2 - + EHDAA2 @@ -30824,7 +30661,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -30866,14 +30703,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive urogenital sinus http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + - + MP-def @@ -30957,19 +30794,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - @@ -31042,22 +30872,12 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/661 http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - - - - - exceptions in some taxa - @@ -31246,15 +31066,15 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -31296,34 +31116,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -31863,7 +31683,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -31905,14 +31725,14 @@ For example, A and B may be gene products and binding of B by A positively regul organism substance - + - + this relationship may be too strong and may be weakened in future @@ -32700,12 +32520,7 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + @@ -32749,6 +32564,16 @@ For example, A and B may be gene products and binding of B by A positively regul epithelium https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg + + + + + + + + + http://palaeos.com/metazoa/porifera/homoscleromorpha.html + @@ -33129,7 +32954,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -33166,14 +32991,14 @@ For example, A and B may be gene products and binding of B by A positively regul abdomen - + - + MA @@ -33416,7 +33241,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -33454,14 +33279,14 @@ For example, A and B may be gene products and binding of B by A positively regul ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -33514,7 +33339,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -33551,14 +33376,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -33603,7 +33428,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -33648,7 +33473,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -33661,7 +33486,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -33860,7 +33685,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -33906,7 +33731,7 @@ For example, A and B may be gene products and binding of B by A positively regul proctodeum https://github.com/obophenotype/uberon/issues/685 - + @@ -33919,7 +33744,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -33993,7 +33818,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -34070,14 +33895,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb - + - + MA @@ -34384,7 +34209,6 @@ For example, A and B may be gene products and binding of B by A positively regul - @@ -34642,160 +34466,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Functional system which consists of structures involved in respiration. - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - AAO:0000541 - BTO:0000203 - CALOHA:TS-1319 - EFO:0000804 - EHDAA2:0001604 - EHDAA:2203 - EMAPA:16727 - EV:0100036 - FMA:7158 - GAID:78 - MA:0000327 - MAT:0000030 - MESH:D012137 - MIAA:0000030 - NCIT:C12779 - SCTID:278197002 - TAO:0000272 - UMLS:C0035237 - VHOG:0000202 - Wikipedia:Respiratory_system - XAO:0000117 - ZFA:0000272 - apparatus respiratorius - respiratory system - uberon - Atmungssystem - apparatus respiratorius - systema respiratorium - UBERON:0001004 - - - - - - - respiratory system - http://upload.wikimedia.org/wikipedia/commons/5/5e/Respiratory_system_complete_en.svg - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb - - - - - Functional system which consists of structures involved in respiration. - Wikipedia:Respiratory_system - http://orcid.org/0000-0002-6601-2165 - - - - - - Wikipedia:Acoelomorpha - - - - - The anatomical system in which the exchange of oxygen and carbon dioxide between the organism and its environment.[AAO] - 2012-06-20 - AAO:0000541 - AAO - AAO:BJB - - - - - There is no doubt that the primitive pattern of vertebrate air-breathing is the buccal pulse pump found in actinopterygian fishes.[well established][VHOG] - 2012-09-17 - VHOG:0000202 - VHOG - ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.599 and Figure 18-23 - http://bgee.unil.ch/ - - - - - UMLS:C0035237 - ncithesaurus:Respiratory_System - - - - - Atmungssystem - BTO:0000203 - - - - - apparatus respiratorius - BTO:0000203 - - - - - systema respiratorium - Wikipedia:Respiratory_system - - - - - @@ -35280,7 +34950,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35333,14 +35003,14 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -35428,7 +35098,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. Part of the nervous system which includes the brain and spinal cord.[AAO] @@ -35475,7 +35145,7 @@ For example, A and B may be gene products and binding of B by A positively regul central nervous system - + @@ -35489,7 +35159,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -35745,7 +35415,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -35782,14 +35452,14 @@ For example, A and B may be gene products and binding of B by A positively regul hindgut http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png - + - + Wikipedia @@ -36030,6 +35700,7 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010841 AEO:0000000 + BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 @@ -36363,14 +36034,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -36422,24 +36093,24 @@ For example, A and B may be gene products and binding of B by A positively regul renal pelvis https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg - + - + - + MA - + FMA @@ -36485,7 +36156,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36522,14 +36193,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg - + - + FMA @@ -36565,7 +36236,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36613,14 +36284,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal corpuscle https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + MA ZFA @@ -36721,7 +36392,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -36766,14 +36437,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular capsule http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg - + - + Wikipedia @@ -36872,11 +36543,11 @@ For example, A and B may be gene products and binding of B by A positively regul - + - - + + @@ -36915,7 +36586,7 @@ For example, A and B may be gene products and binding of B by A positively regul nephron tubule - + @@ -36924,18 +36595,18 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + - + GO MA ZFA @@ -36949,13 +36620,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + checkme @@ -36996,7 +36667,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37044,14 +36715,14 @@ For example, A and B may be gene products and binding of B by A positively regul collecting duct of renal tubule - + - + checkme GO @@ -37211,8 +36882,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP]. @@ -37259,11 +36930,11 @@ For example, A and B may be gene products and binding of B by A positively regul https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Urinary_Bladder.glb https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + @@ -37276,13 +36947,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA - + upper part of UG sinus @@ -37465,15 +37136,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + The basic functional unit of the kidney. its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine. A nephron eliminates wastes from the body, regulates blood volume and blood pressure, controls levels of electrolytes and metabolites, and regulates blood pH. Its functions are vital to life and are regulated by the endocrine system by hormones such as antidiuretic hormone, aldosterone, and parathyroid hormone.[WP]. kidney terms require review for cross-vertebrate compatibility and developmental relationships. @@ -37506,34 +37177,34 @@ For example, A and B may be gene products and binding of B by A positively regul nephron http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + - + FMA - + definitional - + Bgee:AN @@ -37593,15 +37264,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + @@ -37638,15 +37309,15 @@ For example, A and B may be gene products and binding of B by A positively regul proximal convoluted tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + @@ -37659,20 +37330,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + MA uses subclass GOC:mtg_kidney_jan10 - + GO - + Wikipedia @@ -37838,7 +37509,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -37865,7 +37536,7 @@ For example, A and B may be gene products and binding of B by A positively regul descending limb of loop of Henle http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + @@ -37878,7 +37549,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -37902,9 +37573,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -37944,15 +37615,15 @@ For example, A and B may be gene products and binding of B by A positively regul proximal straight tubule - + - + - + @@ -37965,20 +37636,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + MA - + MA uses subclass GOC:mtg_kidney_jan10 - + MA @@ -38029,7 +37700,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -38067,7 +37738,7 @@ For example, A and B may be gene products and binding of B by A positively regul distal convoluted tubule https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png - + @@ -38080,7 +37751,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EMAPA GO MA-modified-from-isa @@ -38208,7 +37879,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The anus and surrounding regions. Encompasses both internal and external regions, where present. Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG] EFO:0000847 @@ -38234,14 +37905,14 @@ For example, A and B may be gene products and binding of B by A positively regul https://github.com/obophenotype/uberon/issues/507 http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png - + - + cjm @@ -38428,10 +38099,10 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -38451,14 +38122,14 @@ For example, A and B may be gene products and binding of B by A positively regul kidney arcuate artery https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg - + - + MA @@ -38499,7 +38170,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A tube extending from the mouth to the anus. @@ -38541,14 +38212,14 @@ For example, A and B may be gene products and binding of B by A positively regul digestive tract - + - + NCBIBook:NBK10107 @@ -39318,8 +38989,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -39332,7 +39003,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -39391,34 +39062,34 @@ For example, A and B may be gene products and binding of B by A positively regul blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -40554,7 +40225,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40567,7 +40238,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40616,24 +40287,24 @@ For example, A and B may be gene products and binding of B by A positively regul kidney - + - + - + FMA - + definitional @@ -40674,8 +40345,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -40719,11 +40390,11 @@ For example, A and B may be gene products and binding of B by A positively regul Once the more complex mesonephros forms the pronephros undergoes apoptosis in amphibians. In fishes the nephron degenerates but the organ remains and becomes a component of the immune system[Wikipedia:Pronephros]. // TODO - check developmental relationships. Note that we previously include the ZFA/XAO terms under the more specific 'pronephric kidney', but these are now merged. TODO GCI: relationship: capable_of GO:0030104 pronephros - + - + @@ -40736,13 +40407,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + OG - + ZFA @@ -40964,7 +40635,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -40998,14 +40669,14 @@ For example, A and B may be gene products and binding of B by A positively regul musculoskeletal system - + - + check ctenophore @@ -41135,7 +40806,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41154,7 +40825,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate[GO]. a microscopic structure in the kidney, which regulates the function of each nephron. The juxtaglomerular apparatus is named for its proximity to the glomerulus: it is found between the vascular pole of the renal corpuscle and the returning distal convoluted tubule of the same nephron. This location is critical to its function in regulating renal blood flow and glomerular filtration rate. The three cellular components of the apparatus are the macula densa, extraglomerular mesangial cells, and juxtaglomerular cells (also known as granular cells)[WP]. BTO:0005157 @@ -41176,24 +40847,24 @@ For example, A and B may be gene products and binding of B by A positively regul juxtaglomerular apparatus - + - + - + MA - + GO @@ -41324,8 +40995,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + @@ -41342,24 +41013,24 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check MA part_ofs - should be spatially disjoint from renal glomerulus? extraglomerular mesangium - + - + - + MA - + MA @@ -41376,7 +41047,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -41417,14 +41088,14 @@ For example, A and B may be gene products and binding of B by A positively regul EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -41532,9 +41203,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -41589,15 +41260,15 @@ For example, A and B may be gene products and binding of B by A positively regul notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + @@ -41616,19 +41287,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + http://tolweb.org/Chordata/2499 - + ZFA - + EHDAA2 @@ -41713,8 +41384,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -41760,11 +41431,11 @@ For example, A and B may be gene products and binding of B by A positively regul somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -41777,13 +41448,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + GOTAX:0000352 - + ZFA @@ -41895,8 +41566,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus[GO]. not part of a nephron or distal tubule in MA and FMA @@ -41915,24 +41586,24 @@ For example, A and B may be gene products and binding of B by A positively regul macula densa - + - + - + MA - + GO @@ -41962,12 +41633,12 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - + + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -42007,66 +41678,66 @@ For example, A and B may be gene products and binding of B by A positively regul http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + Hall and others restrict NC to vertebrates but we opt for a less restrictive constraint to avoid inconsistencies when areas such as P1 area of pallium in hagfishes inherit cell lineage from telecephalon-contributing NC cells ISBN:0073040584 - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -42535,14 +42206,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + Anatomical system that is involved in the production of hematopoietic cells. @@ -42587,24 +42258,24 @@ For example, A and B may be gene products and binding of B by A positively regul hematopoietic system - + - + - + FMA - + definitional @@ -42858,7 +42529,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -42883,14 +42554,14 @@ For example, A and B may be gene products and binding of B by A positively regul presomitic mesoderm - + - + Bgee:AN @@ -42950,8 +42621,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]. Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO] The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-3, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG] @@ -42975,11 +42646,11 @@ For example, A and B may be gene products and binding of B by A positively regul The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney[GOC:mtg_kidney_jan10, PMID:15647339, XAO:0000063, ZFA:0000150] pronephric duct - + - + @@ -42992,13 +42663,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + Wikipedia - + XAO @@ -43185,9 +42856,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -43229,34 +42900,34 @@ For example, A and B may be gene products and binding of B by A positively regul intermediate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + - + AAO - + EMAPA - + XAO @@ -43401,7 +43072,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Paired organ that connects the primitive kidney Wolffian body (or mesonephros) to the cloaca and serves as the anlage for certain male reproductive organs. the Wolffian duct is what remains of the pronephric duct after the atrophy of the pronephros[WP]. In Zebrafish: Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber[ZFA]. Consider adding subclasses for male and female specific variants TODO - mesonephric portion of the nephric duct @@ -43437,7 +43108,7 @@ For example, A and B may be gene products and binding of B by A positively regul mesonephric duct http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + @@ -43450,7 +43121,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -43538,9 +43209,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG] @@ -43572,34 +43243,34 @@ For example, A and B may be gene products and binding of B by A positively regul neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + GOTAX:0000352 - + Wikipedia - + Bgee:AN @@ -43664,7 +43335,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -43693,7 +43364,7 @@ For example, A and B may be gene products and binding of B by A positively regul paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43706,7 +43377,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Bgee:AN @@ -43778,7 +43449,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -43822,7 +43493,7 @@ For example, A and B may be gene products and binding of B by A positively regul lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -43835,7 +43506,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 VHOG @@ -43919,15 +43590,15 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -43947,15 +43618,15 @@ For example, A and B may be gene products and binding of B by A positively regul heart primordium - + - + - + @@ -43968,19 +43639,19 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA - + ZFA - + XAO @@ -44035,8 +43706,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -44064,11 +43735,11 @@ For example, A and B may be gene products and binding of B by A positively regul sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -44087,13 +43758,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + VHOG:0000680 - + ZFA @@ -44399,7 +44070,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -44427,14 +44098,14 @@ For example, A and B may be gene products and binding of B by A positively regul Genes: The positional specification of the metanephrogenic mesenchyme is negatively regulated by Foxc1 and Foxc2. Next the permanent kidney forming metanephrogenic mesenchyme is specified by Hox11 genes. The competence to respond to ureteric bud inducers is regulated by WT1. GDNF secretion restricted to posterior region by Robo2 and Sprouty1. The receptors for GDNF are synthesized in the nephric ducts and later in ureteric buds [ISBN:9780878932504 "Developmental Biology"] metanephric mesenchyme - + - + ISBN:9780878932504 @@ -45150,7 +44821,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -45166,14 +44837,14 @@ For example, A and B may be gene products and binding of B by A positively regul intraembryonic coelom - + - + Wikipedia @@ -45800,8 +45471,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the loop of Henle. It has a brush border epithelial morphology[GO]. TODO - ensure definition works across species. @@ -45818,24 +45489,24 @@ For example, A and B may be gene products and binding of B by A positively regul proximal tubule - + - + - + GO - + GO @@ -45895,7 +45566,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The intermediate tubule is a nephron tubule that lies between the proximal and distal tubules. TODO - check for applicability across species FMA:17718 @@ -45905,14 +45576,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004136 intermediate tubule - + - + FMA @@ -45998,8 +45669,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -46012,24 +45683,24 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -46088,7 +45759,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -46108,14 +45779,14 @@ For example, A and B may be gene products and binding of B by A positively regul heart tube - + - + ZFA-modified @@ -46341,8 +46012,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron. EMAPA:27681 ZFA:0005588 @@ -46352,24 +46023,24 @@ For example, A and B may be gene products and binding of B by A positively regul comma-shaped body - + - + - + cjm - + ZFA @@ -46391,8 +46062,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron. TODO EMAPA:27756 @@ -46404,24 +46075,24 @@ For example, A and B may be gene products and binding of B by A positively regul S-shaped body - + - + - + cjm - + GO @@ -46841,7 +46512,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -46880,14 +46551,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular capillary - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -47517,10 +47188,10 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + @@ -47554,14 +47225,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal afferent arteriole http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -47922,7 +47593,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -47938,14 +47609,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeletal element - + - + VSAO @@ -47990,7 +47661,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -48029,14 +47700,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0004770 articular system - + - + FMA @@ -48352,7 +48023,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -48375,14 +48046,14 @@ For example, A and B may be gene products and binding of B by A positively regul somatopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png - + - + EHDAA2 @@ -48448,9 +48119,9 @@ For example, A and B may be gene products and binding of B by A positively regul - - - + + + @@ -48471,34 +48142,34 @@ For example, A and B may be gene products and binding of B by A positively regul urogenital fold - + - + - + - + EHDAA2 - + Wikipedia - + EHDAA2 @@ -49001,7 +48672,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + . class added for consistency with GO - consider merging with kidney mesenchyme. uberon @@ -49009,14 +48680,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005095 kidney rudiment - + - + GO @@ -49132,7 +48803,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct[GO]. BTO:0004539 @@ -49150,14 +48821,14 @@ For example, A and B may be gene products and binding of B by A positively regul renal connecting tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -49890,7 +49561,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -49906,14 +49577,14 @@ For example, A and B may be gene products and binding of B by A positively regul trunk mesenchyme - + - + EHDAA2 @@ -50024,7 +49695,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -50043,14 +49714,14 @@ For example, A and B may be gene products and binding of B by A positively regul primitive heart tube - + - + ZFA @@ -50084,7 +49755,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50113,7 +49784,7 @@ For example, A and B may be gene products and binding of B by A positively regul gonad primordium - + @@ -50126,7 +49797,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + ZFA @@ -50193,14 +49864,14 @@ For example, A and B may be gene products and binding of B by A positively regul - + - + A mesoderm that has the potential to develop into a pronephros. Portion of tissue that consists of the mesenchymal precursor to the pronephric kidney and that begins to separate from the intermediate mesoderm at NF stage 21 and epithelializes by NF stage 30.[AAO] AAO:0011090 @@ -50219,24 +49890,24 @@ For example, A and B may be gene products and binding of B by A positively regul the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 "Developmental Biology", PMID:10720431 "Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm"]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney pronephric mesoderm - + - + - + ZFA - + Bgee:AN @@ -50292,7 +49963,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50311,14 +49982,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular tuft - + - + Wikipedia @@ -50575,7 +50246,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50605,14 +50276,14 @@ For example, A and B may be gene products and binding of B by A positively regul glomerular basement membrane http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -50706,7 +50377,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -50716,7 +50387,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0005856 developing mesenchymal condensation - + @@ -50735,7 +50406,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO-modified-relation @@ -50843,7 +50514,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -50884,14 +50555,14 @@ For example, A and B may be gene products and binding of B by A positively regul cloacal membrane http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png - + - + Wikipedia @@ -50944,7 +50615,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -50959,7 +50630,7 @@ For example, A and B may be gene products and binding of B by A positively regul notochordal plate - + @@ -50972,7 +50643,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -51009,7 +50680,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -51026,14 +50697,14 @@ For example, A and B may be gene products and binding of B by A positively regul The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -51306,41 +50977,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - currently this is an extremely generic class, encompassing both protostomes and deuterostomes. - 2023-04-20 - branchial - pharyngeal - MAT:0000049 - MESH:D010614 - MIAA:0000049 - uberon - anterior part of foregut - pharyngeal tube - UBERON:0006562 - - - pharynx - - - - - The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. - GO:0060465 - - - - @@ -51619,7 +51255,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A region of nephron tubule that is part of a cortex of kidney. EMAPA:18976 MA:0002609 @@ -51629,14 +51265,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0006853 renal cortex tubule - + - + MA @@ -52121,7 +51757,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis SPD:0000130 @@ -52136,14 +51772,14 @@ For example, A and B may be gene products and binding of B by A positively regul Gene notes: Bmp, Nkx, Gata primary circulatory organ - + - + GO uses blood circulation generically to include the haemolymphatic fluid of arthropods @@ -52233,7 +51869,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -52250,14 +51886,14 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -52356,7 +51992,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -52382,7 +52018,7 @@ For example, A and B may be gene products and binding of B by A positively regul presumptive paraxial mesoderm - + @@ -52398,7 +52034,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + https://github.com/obophenotype/uberon/issues/1277 @@ -52559,7 +52195,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 @@ -52567,7 +52203,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0007524 dense mesenchyme tissue - + @@ -52580,7 +52216,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -52795,7 +52431,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -52814,14 +52450,14 @@ For example, A and B may be gene products and binding of B by A positively regul vascular system - + - + MA @@ -52851,99 +52487,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - - - - - - - - - - - - - - - - - - - - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - CALOHA:TS-2356 - EV:0100009 - FMA:280881 - MA:0000006 - NCIT:C12418 - SCTID:361355005 - UMLS:C0460004 - WikipediaCategory:Head_and_neck - galen:HeadAndNeck - uberon - cephalic area - cephalic part of animal - cephalic region - head and neck - head or neck - UBERON:0007811 - - craniocervical region - - - - - - MA - - - - - The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. - https://orcid.org/0000-0002-6601-2165 - - - - - UMLS:C0460004 - ncithesaurus:Head_and_Neck - - - - - cephalic area - https://github.com/obophenotype/uberon/issues/379 - - - - - cephalic part of animal - Wikipedia:Head - - - - - cephalic region - https://github.com/obophenotype/uberon/issues/379 - - - - - head and neck - FMA:280881 - - - - @@ -53074,7 +52617,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53117,14 +52660,14 @@ For example, A and B may be gene products and binding of B by A positively regul pelvic girdle skeleton http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png - + - + PMID:21455939 @@ -53220,7 +52763,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The functional tissue of the kidney, consisting of the nephrons. BTO:0003604 FMA:15574 @@ -53231,7 +52774,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0008987 renal parenchyma - + @@ -53244,7 +52787,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + FMA @@ -53314,7 +52857,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53331,14 +52874,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -53457,7 +53000,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon @@ -53465,14 +53008,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -53571,7 +53114,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EFO:0003704 TAO:0005041 ZFA:0005041 @@ -53581,14 +53124,14 @@ For example, A and B may be gene products and binding of B by A positively regul anterior lateral plate mesoderm - + - + ZFA @@ -53917,7 +53460,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -53935,14 +53478,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010227 future cardiac atrium - + - + ZFA @@ -54085,7 +53628,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54099,7 +53642,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010377 mesenchyme from somatopleure - + @@ -54112,7 +53655,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -54128,7 +53671,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 @@ -54138,14 +53681,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010523 microcirculatory vessel - + - + ZFA @@ -54178,7 +53721,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54195,7 +53738,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010532 primitive nephron - + @@ -54208,7 +53751,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2 @@ -54230,7 +53773,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54241,7 +53784,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0010536 nephron progenitor - + @@ -54254,7 +53797,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -54576,8 +54119,8 @@ For example, A and B may be gene products and binding of B by A positively regul - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -54590,11 +54133,11 @@ For example, A and B may be gene products and binding of B by A positively regul subdivision of skeleton - + - + @@ -54607,13 +54150,13 @@ For example, A and B may be gene products and binding of B by A positively regul - + UBERONREF:0000003 - + VSAO @@ -54658,12 +54201,6 @@ For example, A and B may be gene products and binding of B by A positively regul - - - - - - Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon @@ -54690,7 +54227,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 @@ -54700,7 +54237,7 @@ For example, A and B may be gene products and binding of B by A positively regul postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -54713,7 +54250,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + cjm @@ -54737,7 +54274,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -54750,7 +54287,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + Subdivision of urinary system which consists of the kidney and the ureters. FMA:45658 @@ -54763,24 +54300,24 @@ For example, A and B may be gene products and binding of B by A positively regul upper urinary tract - + - + - + FMA - + FMA-abduced-lr @@ -55102,7 +54639,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55117,14 +54654,14 @@ For example, A and B may be gene products and binding of B by A positively regul We presume this is distinct from AAO:0001003, an external integumentary structure - check with amphibian anatomy ontology developers. AO notes: the text def states mesenchymal swelling, EHDAA2 splits into mesenchymal and epithelial parts embryonic cloacal fold - + - + EHDAA2 @@ -55147,20 +54684,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0004588 uberon UBERON:0012361 internal anal region - + - + EHDAA2 @@ -55170,20 +54707,20 @@ For example, A and B may be gene products and binding of B by A positively regul - + EHDAA2:0004589 uberon UBERON:0012469 external anal region - + - + EHDAA2 @@ -55210,7 +54747,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55230,14 +54767,14 @@ For example, A and B may be gene products and binding of B by A positively regul skeleton of pelvic complex - + - + FMA @@ -55289,7 +54826,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The precursor of the urethra. In humans, the urethral groove is a temporary linear indentation on the underside (ventral side) of the male penis during embryonic development. It typically appears around 8 weeks of gestation and becomes closed into a normal male urethra by the 12th week SCTID:361531004 @@ -55301,14 +54838,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0013241 embryonic urethral groove - + - + Wikipedia @@ -55921,7 +55458,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + @@ -55944,7 +55481,7 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0016887 entire extraembryonic component - + @@ -55957,7 +55494,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + AEO @@ -56359,7 +55896,6 @@ For example, A and B may be gene products and binding of B by A positively regul AAO:0010270 - AEO:0000154 ZFA:0005594 uberon UBERON:0036215 @@ -56379,7 +55915,7 @@ For example, A and B may be gene products and binding of B by A positively regul - + The upper tract of the renal system. The renal pelvis is the large cavity in the middle of each kidney. Urine drains from each kidney through a long tube called the ureter, into the bladder, where it is stored until it is passed from the body through the urethra. NCIT:C54419 renal pelvis and ureter @@ -56388,14 +55924,14 @@ For example, A and B may be gene products and binding of B by A positively regul UBERON:0036295 renal pelvis/ureter - + - + NCIT diff --git a/subsets/kidney_upper_slim.tsv b/subsets/kidney_upper_slim.tsv index e1575380b..0fcb14222 100644 --- a/subsets/kidney_upper_slim.tsv +++ b/subsets/kidney_upper_slim.tsv @@ -1,377 +1,376 @@ ?x ?label -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1003 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1014 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1024 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1030 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1036 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1042 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1048 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1054 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1060 -_:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid1066 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+_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid976 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid983 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid989 +_:B6571aa82X2D487eX2D4480X2Db6d1X2D930b425859f2genid996 "continuant" "occurrent" "independent continuant" @@ -542,7 +541,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "muscle system process" "circulatory system process" "renal system process" - "respiratory system process" "regulation of systemic arterial blood pressure mediated by a chemical signal" "renal system process involved in regulation of systemic arterial blood pressure" "regulation of systemic arterial blood pressure" @@ -601,7 +599,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "nervous system development" "endoderm development" "mesoderm development" - "respiratory gaseous exchange by respiratory system" "digestion" "excretion" "blood circulation" @@ -950,7 +947,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "processual entity" "tube" "appendage" - "head" "vessel" "ureter" "urethra" @@ -979,7 +975,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "neurula stage" "organogenesis stage" "cell layer" - "anterior region of body" "posterior region of body" "membranous layer" "orifice" @@ -1026,7 +1021,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "skeletal joint" "reproductive system" "gonad" - "respiratory system" "digestive system" "renal system" "circulatory system" @@ -1229,7 +1223,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "kidney vasculature" "renal duct" "excretory tube" - "pharynx" "presumptive endoderm" "presumptive blood" "presumptive structure" @@ -1260,7 +1253,6 @@ _:Bdf254eadX2D4002X2D463cX2D83b7X2Dcbe7f1ce99eagenid996 "kidney field" "anlage" "vascular system" - "craniocervical region" "appendage girdle region" "pelvic girdle skeleton" "renal parenchyma"