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index.html
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<!DOCTYPE html><html lang="en">
<head>
<meta http-equiv="Content-Type" charset="utf-8" name="viewport" content="width=device-width, initial-scale=1">
<meta name="description"
content="DataPLAN can generate a data management plan or data management and sharing plan for Horizon 2020, Horizon Europe, German Research Foundation (Deutsche Forschungsgemeinschaft (DFG)) , Federal Ministry of Education and Research (BMBF), BMEL, Volkswagen Foundation, U.S. National Science Foundation (NSF) and Biotechnology and Biological Sciences Research Council (BBSRC) in minutes. The DMPs generated by DataPLAN include relevant metadata standards and endpoint repositories. This tool aims to be a time saving and easy-to-use tool to create data management documents.">
<meta name="keywords" content="DataPLAN, DMP, DMSP, Horizon Europe, BMBF, BMEL, BBSRC, NSF, European Union, Horizon 2020, dfg, Bundesministerium für Ernaührung und Landwirtschaft, Deutschforschungsgemeinschaft, Bundesministerium für Bildung und Forschung, FAIR, data management plan, DMP, free, open-source">
<!-- disable cache across browsers for testing purpose -->
<meta http-equiv="Expires" content="0" />
<title>DataPLAN | Easily Generate a Data Management Plan </title>
<!-- https://developer.mozilla.org/en-US/docs/Web/HTTP/CSP -->
<!-- loading css styleSheets -->
<link href="css/bootstrap.min2106.css" rel="stylesheet" />
<link href="css/bs5-intro-tour2106.css" rel="stylesheet" />
<script src="DMPDocs/BBSRC-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/NSF-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/carl-zeiss-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/msca-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/bmbf-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/bmel-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/vw-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/dfg-dmp-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/horizon_europe-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/Horizon2020_DMP-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<script src="DMPDocs/practical-guide-2024-11-22.js" type="text/javascript" charset="utf-8"></script>
<!-- loading javascript scripts -->
<script src="js/split.min.js" type="text/javascript" charset="utf-8"></script>
<script src="js/bootstrap.bundle.min2106.js" type="text/javascript" charset="utf-8"> </script>
<script async src="js/FileSaver.js" type="text/javascript" charset="utf-8"></script>
<script src="js/d3.min.js" type="text/javascript" charset="utf-8"> </script>
<script src="js/bs5-intro-tour2106.js" type="text/javascript" charset="utf-8"></script>
<link href="css/custom24-10-20.css" rel="stylesheet" />
<link href="favicon.png" rel="icon">
<!-- 100% privacy-first analytics -->
<script async defer src="https://scripts.simpleanalyticscdn.com/latest.js"></script>
<noscript><img src="https://queue.simpleanalyticscdn.com/noscript.gif" alt=""
referrerpolicy="no-referrer-when-downgrade" /></noscript>
<script>
</script>
</head>
<script>
/********** Section variables and data structures ***********/
/**
* @name is_firefox
* @global
* @static
* @description to log if the browser is Firefox
**/
var is_firefox = navigator.userAgent.toLowerCase().indexOf('firefox') > -1;// check if the browser is firefox. For firefox, an argument in window.find() function is different
/**
* @name is_ie
* @global
* @static
* @description to log if the browser is IE
**/
const dmpStrings = {
"Horizon2020_DMP" : Horizon2020_DMP.Horizon2020_DMP,
"horizon_europe" : horizon_europe.horizon_europe,
"dfg-dmp" : dfg_dmp["dfg-dmp"],
"bmbf-dmp" : bmbf_dmp["bmbf-dmp"],
"BBSRC-dmp": BBSRC_dmp["BBSRC-dmp"],
"NSF-dmp": NSF_dmp["NSF-dmp"],
"bmel-dmp": bmel_dmp["bmel-dmp"],
"cz-dmp": cz_dmp["cz-dmp"],
"vw-dmp": vw_dmp["vw-dmp"],
"msca-dmp": msca_dmp["msca-dmp"],
"practical-guide": practical_guide["practical-guide"],
"user-defined": window.localStorage.getItem("fulltext_user"),
}
const dmpFunders = {
"Horizon2020_DMP" : "Horizon 2020",
"horizon_europe" : "Horizon Europe",
"dfg-dmp" : "DFG (Deutschforschungsgemeinschaft)",
"bmbf-dmp" : "BMBF (Bundes Ministerium für Bildung und Forschung)",
"msca-dmp" : "Marie Skłodowska-Curie Actions",
"BBSRC-dmp": "BBSRC",
"NSF-dmp": "NSF",
"bmel-dmp": "BMEL",
"cz-dmp": "Carl-Zeiss Stiftung",
"vw-dmp": "Volkswagen Foundation",
"practical-guide": "Practical Guide",
"user-defined": "Userdefined",
}
const dmpLanguage = {
"Horizon2020_DMP" : "en",
"horizon_europe" : "en",
"dfg-dmp" : "en",
"bmbf-dmp" : "de",
"msca-dmp" : "en",
"BBSRC-dmp": "en",
"NSF-dmp": "en",
"bmel-dmp": "de",
"vw-dmp": "de",
"cz-dmp": "de",
"practical-guide": "en",
"user-defined": "en",
}
var is_ie = navigator.userAgent.toLowerCase().indexOf('MSIE ') > -1;// check if the browser is firefox. For firefox, an argument
if (is_ie > 0) // If Internet Explorer, return version number
{
alert(parseInt(ua.substring(msie + 5, ua.indexOf(".", msie))) + ", this browser is not supported");
}
else // If another browser, return 0
{
//verbose console.log("browser is supported");
}
var debug;
var doc_name = 'Horizon2020_DMP'; // default document to use at the first page load
var user_info = window.localStorage.getItem("user_info"); // store user information in local storage
var wordcloud = window.localStorage.getItem("wordcloud") || "false";
var scroll_y = window.localStorage.getItem("scroll_y");
//console.log("scroll_y read from cache is " + scroll_y);
var inputHistory = JSON.parse(window.localStorage.getItem("inputHistory")) || { "replace":{}, "checkbox":{} };
var cached_template = window.localStorage.getItem("template"); // try to get the saved templates from local storage
var datepicker_list = []; // initialize a list to store DMP update reminder
var toast_list;
var cookie_modal;
var old_percentage;
var scroll_marker;
var punctualReplaced = false;
var dmpEle;
var convertedEle;
var reminders;
var reminderModal;
var classicMode = true;
var initialed = false; // set the initialed status to false
const JSONString = '{"dmp":{"title":"DMP of Example Project","contact":{"contact_id":{"identifier":"http://orcid.org/0000-0000-0000-0000","type":"orcid"},"mbox":"DMP of email","name":"DMP of Example User"},"created":"2024-06-19T16:45:09.7","dmp_id":{"identifier":"https://doi.org/10.0000/00.0.1234","type":"doi"},"dataset":[{"dataset_id":{"identifier":"https://doi.org/10.0000/00.0.5678","type":"doi"},"title":"Placeholder dataset","personal_data":"unknown","sensitive_data":"unknown"}],"ethical_issues_exist":"unknown","language":"eng","modified":"2024-07-09T10:53:50.4","submission":"2024-07-09T10:53:50.4","version":"1.0"},"replace":{"$_PROJECTNAME":"Example Project","$_STUDYOBJECT":"Example Topic","$_PROJECTAIM":"aims at Example Aim","$_DMPVERSION":"1.0","$_USERNAME":"Example User","$_EMAIL":"email","$_DATAOFFICER":"Example data officer name","$_DATAUTILITY":"Industry, politicians and students can also use the data for different purposes.","$_UPDATEMONTH":"Example Month","$_PREVIOUSPROJECTS":"Previous Project Name","$_PROPRIETARY":"Proprietary Software","$_RAWDATA":"???","$_DERIVEDDATA":"???","$_FUNDINGPROGRAMME":"action number or funding programme name","$_CREATIONDATE":"xxxx-xx-xx","$_MODIFICATIONDATE":"xxxx-xx-xx","$_OTHERSTANDARDINPUT":"other standards","$_OTHEREP":"Other repositories","$_PARTNERS":"partner name", "$_ADDPROJECTCOORDINATOR": "project coordinator" },"checkbox":{"checkbox_1":{"checked":["check_dataplant"],"unchecked":[ "check_acronym","check_protect","check_update","check_previousprojects","check_industry","check_proprietary","check_partners","check_eu"]},"checkbox_2":{"checked":[],"unchecked":["check_transcriptomic", "check_genetic","check_genomic","check_cloned-dna","check_rnaseq","check_metabolomic","check_proteomic","check_phenotypic","check_targeted","check_image","check_models","check_code","check_excel"]},"checkbox_3":{"checked":[],"unchecked":["check_miappe","check_minseqe","check_otherstandards","check_dublincore","check_marc21", "check_darwincore", "check_bioschemas", "check_schemaorg" ,"check_early","check_ipissue","check_vvisualization","check_mixs","check_migseu","check_migsorg","check_mims","check_mimarksspecimen","check_mimarkssurvey","check_misag","check_mimag","check_miame","check_mmiamet","check_rembi","check_miape","check_mimix","check_beforepublication","check_endofproject","check_embargo","check_request","check_nfdi","check_french","check_eosc"]},"checkbox_5":{"checked":[],"unchecked":["check_genbank","check_sra","check_geo","check_ena","check_arrayexpress","check_metabolights","check_pride","check_bioimage","check_idr","check_edal","check_metaworkbench","check_intact","check_pdb","check_chebi","check_otherep"]}},"update":{"timeline":[],"storage":[{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]}]}}';
const JSONStringDe = '{ "dmp": { "title": "DMP des Beispielprojekts", "contact": { "contact_id": { "identifier": "http://orcid.org/0000-0000-0000-0000", "type": "orcid" }, "mbox": "E-Mail des DMP", "name": "DMP des Beispielbenutzers" }, "created": "2024-06-19T16:45:09.7", "dmp_id": { "identifier": "https://doi.org/10.0000/00.0.1234", "type": "doi" }, "dataset": [ { "dataset_id": { "identifier": "https://doi.org/10.0000/00.0.5678", "type": "doi" }, "title": "Platzhalter-Datensatz", "personal_data": "unbekannt", "sensitive_data": "unbekannt" } ], "ethical_issues_exist": "unbekannt", "language": "eng", "modified": "2024-07-09T10:53:50.4", "submission": "2024-07-09T10:53:50.4", "version": "1.0" }, "replace": { "$_PROJECTNAME": "Beispielprojekt", "$_STUDYOBJECT": "Beispielthema", "$_PROJECTAIM": "Beispielziel", "$_DMPVERSION": "1.0", "$_USERNAME": "Beispielbenutzer", "$_EMAIL": "E-Mail", "$_DATAOFFICER": "Name des Datenbeauftragten", "$_DATAUTILITY": "Industrie, Politiker und Studenten können die Daten auch für verschiedene Zwecke nutzen.", "$_UPDATEMONTH": "Beispielmonat", "$_PREVIOUSPROJECTS": "Name des vorherigen Projekts", "$_PROPRIETARY": "Proprietäre Software", "$_RAWDATA": "???", "$_DERIVEDDATA": "???", "$_FUNDINGPROGRAMME": "Aktionsnummer oder Name des Förderprogramms", "$_CREATIONDATE": "xxxx-xx-xx", "$_MODIFICATIONDATE": "xxxx-xx-xx", "$_OTHERSTANDARDINPUT": "andere Standards", "$_OTHEREP": "Andere Repositories", "$_PARTNERS": "Name des Partners", "$_ADDPROJECTCOORDINATOR": "Projektkoordinator", "$_ADDACRONYM": "Fügen Sie hier das Akronym ein" },"checkbox":{"checkbox_1":{"checked":["check_dataplant"],"unchecked":[ "check_acronym","check_protect","check_update","check_previousprojects","check_industry","check_proprietary","check_partners","check_eu"]},"checkbox_2":{"checked":[],"unchecked":["check_transcriptomic", "check_genetic","check_genomic","check_cloned-dna","check_rnaseq","check_metabolomic","check_proteomic","check_phenotypic","check_targeted","check_image","check_models","check_code","check_excel"]},"checkbox_3":{"checked":[],"unchecked":["check_miappe","check_minseqe","check_otherstandards","check_dublincore","check_marc21", "check_darwincore", "check_bioschemas", "check_schemaorg" ,"check_early","check_ipissue","check_vvisualization","check_mixs","check_migseu","check_migsorg","check_mims","check_mimarksspecimen","check_mimarkssurvey","check_misag","check_mimag","check_miame","check_mmiamet","check_rembi","check_miape","check_mimix","check_beforepublication","check_endofproject","check_embargo","check_request","check_nfdi","check_french","check_eosc"]},"checkbox_5":{"checked":[],"unchecked":["check_genbank","check_sra","check_geo","check_ena","check_arrayexpress","check_metabolights","check_pride","check_bioimage","check_idr","check_edal","check_metaworkbench","check_intact","check_pdb","check_chebi","check_otherep"]}},"update":{"timeline":[],"storage":[{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]},{"answer":[],"name":[]}]}}';
var cached_a_en = window.localStorage.getItem("saved_a") || JSONString; // try to get the saved answers from local storage
var cached_a_de = window.localStorage.getItem("saved_a_de") || JSONStringDe; // try to get the saved answers from local storage
const templateJSON = '{"replace":{"$_PROJECTNAME":"Example Project","$_STUDYOBJECT":"Example Topic","$_PROJECTAIM":"aims at Example Aim","$_USERNAME":"Example User","$_EMAIL":"email","$_DATAOFFICER":"Example data officer name","$_RAWDATA":"???","$_DERIVEDDATA":"???","$_FUNDINGPROGRAMME":"action number or funding programme name","$_CREATIONDATE":"xxxx-xx-xx","$_MODIFICATIONDATE":"xxxx-xx-xx"}}';
const templateJSONDe = '{"replace": { "$_PROJECTNAME": "Beispielprojekt", "$_STUDYOBJECT": "Beispielthema", "$_PROJECTAIM": "Beispielziel", "$_USERNAME": "Beispielbenutzer", "$_EMAIL": "E-Mail", "$_DATAOFFICER": "Name des Datenbeauftragten", "$_RAWDATA": "???", "$_DERIVEDDATA": "???", "$_FUNDINGPROGRAMME": "Aktionsnummer oder Name des Förderprogramms", "$_CREATIONDATE": "xxxx-xx-xx", "$_MODIFICATIONDATE": "xxxx-xx-xx" }}';
var temp_a_en = JSON.parse(templateJSON); // template answers used to compare with saved answers
var temp_a_de = JSON.parse(templateJSONDe); // template answers used to compare with saved answers
var temp_a;
var optional_temp = {
"en": {
"$_UPDATEMONTH":"Example Month",
"$_PREVIOUSPROJECTS":"Previous Project Name",
"$_PROPRIETARY":"Proprietary Software",
"$_PARTNERS":"partner name" ,
"$_OTHEREP":"" ,
"$_ADDACRONYM":"Add the acronym here",
"$_ADDPROJECTCOORDINATOR":"Project Coordinator",
},
"de": {
"$_UPDATEMONTH":"Beispielmonat",
"$_PREVIOUSPROJECTS":"Name des vorherigen Projekts",
"$_PROPRIETARY":"Proprietäre Software",
"$_PARTNERS":"Name des Partners" ,
"$_OTHEREP":"" ,
"$_ADDACRONYM":"Fügen Sie hier das Akronym ein",
"$_ADDPROJECTCOORDINATOR":"Projektkoordinator",
}
}
function initJSON(json0) {
if (json0 !== null) { // if there is an answer saved in local storage
let json1 = JSON.parse(json0); // load the cached answers to webpage
try {
json1["update"];
json1["update"]["timeline"];
json1["dmp"];
json1["update"]["storage"]["0"]["answer"]["$_PROJECTNAME"]
} // If some answers are missing, re-initialize the answers.
catch (e) {
json1["update"] = {
"timeline": [
], "storage": [
{ "answer": { "replace": json1["replace"], "checkbox": json1["checkbox"] }, "name": [], },
{ "answer": {}, "name": "" , },
{ "answer": {}, "name": "" , },
{ "answer": {}, "name": "" , },
{ "answer": {}, "name": "" , },
{ "answer": {}, "name": "" , },
]
};
json1["dmp"] = {
"title": "Minimal DMP",
"created": "2018-07-23T10:10:23.6",
"ethical_issues_exist": "no",
"language": "eng",
"modified": "2019-02-06T15:30:42.1",
"contact": {
"mbox": "[email protected]",
"name": "Charlie Chaplin",
"affiliation":"",
},
"project":{
"title":"project name",
"description":"description",
"start":"starting date",
"funding":{
"funder_id":"funder_id",
"status":"status"
}
},
"dataset": [{
"title":"titile",
"type":"",
"personal_data": "no",
"sensitive_data": "no",
"distribution":{
"host":{
"description":"description"
}
}
}
],
"submission": {
"time": "2022-07-06T15:30:42.1",
"funding": "Horizon Europe ",
},
};
}
return json1;
} else { // if there is no saved answer, initiate a new saved answer
return JSON.parse(JSONString);
}
}
var saved_a_en = initJSON(cached_a_en) || initJSON(cached_a_en);
var saved_a_de = initJSON(cached_a_de) || initJSON(cached_a_de);
/*============== tutorial ==============*/
// a tutorial to help users get familiar with the DataPLAN tool.
var steps = [{
title: "DataPLAN ",
content: `
<div class="row">
<div class="col mt-1">
<p> Welcome to the DataPLAN tool! This tool is designed to help you quickly generate five Data Management Plans (DMPs) in just two minutes. This work has been featured in the journal <a href="https://doi.org/10.3390/data8110159" target="_blank" > Data</a>. </p>
</div>
<div class="col " >
<a href="https://www.mdpi.com/2306-5729/8/11/159" target="_blank" ><img src="https://nfdi4plants.github.io/dataplan/images/cover.webp" class="img-fluid" alt="issueCover" ></a>
</div>
</div>
`
//
}, {
id: "navbar-interface",
content: "<p>The questionnaire consists of five easy-to-navigate sections.</p>"
}, {
id: "intro-tour-input",
content: "<p>All five sections are conveniently organized on a single page for a seamless experience.</p>"
}, {
id: "form_projectname",
content: "<p>Please enter your project name in the highlighted input box. For example, you can type: 'An awesome project.' Once you've entered the name, click anywhere else or press the tab key to proceed. Your answers will be saved automatically.</p>"
}, {
id: "split-0",
content: "<p>The document content has now been updated with your input.</p>"
}, {
id: "save_button",
content: "<p>You can save your answers as a JSON file or copy the generated document from the left-hand side.</p>"
}, {
id: "upload_button",
content: "<p> If you've saved your progress, you can upload the 'JSON' file to continue where you left off. </p>"
}, {
id: "change_template",
content: `<p>You can choose from a variety of templates, including those for Horizon 2020, Horizon Europe, DFG, BMBF, and more. <a href="#" onclick=' document.querySelector("#change_template").click();document.querySelector(".tour-exit").click();'>Click here to browse all available templates</a>.</p>`
}
];
var maxWidth = 1100;
var tour = new Tour(steps); // initialize the guided tour
var upload_json1,
upload_json2,
import_history,
current_input_answer,
uploaded_input_answer,
current_origin=0,
uploaded_origin=0,
uploaded_input_all;
const prefix = '$_';
/********** functions ***********/
/**
* @function addCheckboxOpt( missing, otherMissing )
* @description Update the previous saved answers to make it compatible to the newest version of software.
* @global
*/
/**
* @function updateSavedAnswers
* @description Update the previous saved answers to make it compatible to the newest version of software.
* @global
*/
function answersManagement(name){
saved_a_de = answerStorageUpdate(saved_a_de);
saved_a_en = answerStorageUpdate(saved_a_en);
if (dmpLanguage[name] == "en"){
window.temp_a = temp_a_en;
window.saved_a = saved_a_en;
}else if(dmpLanguage[name] == "de"){
window.temp_a = temp_a_de;
window.saved_a = saved_a_de;
}
}
function addSinglePlaceholder(importJSON, oldPlaceholder, content ){
try {
Object.keys(importJSON["replace"]).includes( oldPlaceholder) ? {} : importJSON["replace"][oldPlaceholder] = content;
}
catch (e) {
console.error(e);
};
}
function updateSinglePlaceholder(importJSON, oldPlaceholder, oldContent, newPlaceholder ="", newContent= "" ){
try {
(!Object.keys(importJSON["replace"]).includes("$_OTHERSTANDARDINPUT") || window.saved_a["replace"]["$_OTHERSTANDARDINPUT"].includes("Other standards are also adhered to") )? window.saved_a["replace"]["$_OTHERSTANDARDINPUT"] = "other standards" : {} ;
}
catch (e) { };
}
function updateSingleCheckbox(importJSON, oldPlaceholder, newPlaceholder=""){
try {
if (Object.keys(saved_a["replace"]).includes("$_PROJECT")) {
{Object.defineProperty(saved_a["replace"], "$_PROJECTNAME", Object.getOwnPropertyDescriptor(saved_a["replace"], "$_PROJECT"));
delete saved_a["replace"]["$_PROJECT"]}
} ;
}catch(e){}
}
function updateSavedAnswers() {
// check if the newly added answers are there, to be backward compatible
try {
Object.keys(window.saved_a["replace"]).includes("$_DATAUTILITY") ? {} : window.saved_a["replace"]["$_DATAUTILITY"] = "Industry, politicians and students can also use the data for different purposes.";
}
catch (e) { };
try {
(!Object.keys(window.saved_a["replace"]).includes("$_OTHERSTANDARDINPUT") || window.saved_a["replace"]["$_OTHERSTANDARDINPUT"].includes("Other standards are also adhered to") )? window.saved_a["replace"]["$_OTHERSTANDARDINPUT"] = "other standards" : {} ;
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_3"]["checked"]).includes("check_otherstandards")) && (!Object.values(window.saved_a["checkbox"]["checkbox_3"]["unchecked"]).includes("check_otherstandards"))) ? window.saved_a["checkbox"]["checkbox_3"]["unchecked"].push("check_otherstandards") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_5"]["checked"]).includes("check_otherep")) && (!Object.values(window.saved_a["checkbox"]["checkbox_5"]["unchecked"]).includes("check_otherep"))) ? window.saved_a["checkbox"]["checkbox_5"]["unchecked"].push("check_otherep") : {};
}
catch (e) { console.log("other ep error"); };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_5"]["checked"]).includes("check_metabolights")) && (!Object.values(window.saved_a["checkbox"]["checkbox_5"]["unchecked"]).includes("check_metabolights"))) ? window.saved_a["checkbox"]["checkbox_5"]["unchecked"].push("check_metabolights") : {};
}
catch (e) { console.log("metabolights error"); };
try {
(!Object.keys(window.saved_a["checkbox"]).includes("checkbox_5")) ? window.saved_a["checkbox"]["checkbox_5"] = { "checked": ["check_geo", "check_genbank", "check_proteomexchange", "check_Zenodo", "check_dataDyrad"], "unchecked": ["check_ena", "check_arrayexpress", "check_pride",] } : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_3"]["checked"]).includes("check_beforepublication")) && (!Object.values(window.saved_a["checkbox"]["checkbox_3"]["unchecked"]).includes("check_beforepublication"))) ? window.saved_a["checkbox"]["checkbox_3"]["unchecked"].push("check_beforepublication", "check_endofproject", "check_embargo", "check_request", "check_nfdi", "check_french", "check_eosc") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_5"]["checked"]).includes("check_metaworkbench")) && (!Object.values(window.saved_a["checkbox"]["checkbox_5"]["unchecked"]).includes("check_metaworkbench"))) ? window.saved_a["checkbox"]["checkbox_5"]["unchecked"].push("check_edal", "check_intact", "check_sra", "check_bioimage", "check_idr", "check_metaworkbench", "check_pdb", "check_chebi", "check_otherep") : {};
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_OTHEREP") ? {} : window.saved_a["replace"]["$_OTHEREP"] = "Other repositories";
}
catch (e) { };
try {
window.saved_a = JSON.parse(JSON.stringify(window.saved_a).replaceAll("check_dublin_core", "check_dublincore").replaceAll("check_marc_21", "check_marc21"));
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_3"]["checked"]).includes("check_mixs")) && (!Object.values(window.saved_a["checkbox"]["checkbox_3"]["unchecked"]).includes("check_mixs"))) ? window.saved_a["checkbox"]["checkbox_3"]["unchecked"].push("check_mixs", "check_migseu", "check_migsorg", "check_mims", "check_mimarksspecimen", "check_mimarkssurvey", "check_misag", "check_mimag", "check_miame", "check_rembi", "check_miape", "check_mimix") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_2"]["checked"]).includes("check_transcriptomic")) && (!Object.values(window.saved_a["checkbox"]["checkbox_2"]["unchecked"]).includes("check_transcriptomic"))) ? window.saved_a["checkbox"]["checkbox_2"]["unchecked"].push("check_transcriptomic") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_3"]["checked"]).includes("check_mmiamet")) && (!Object.values(window.saved_a["checkbox"]["checkbox_3"]["unchecked"]).includes("check_mmiamet"))) ? window.saved_a["checkbox"]["checkbox_3"]["unchecked"].push("check_mmiamet") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_1"]["checked"]).includes("check_acronym")) && (!Object.values(window.saved_a["checkbox"]["checkbox_1"]["unchecked"]).includes("check_acronym"))) ? window.saved_a["checkbox"]["checkbox_1"]["unchecked"].push("check_acronym") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_1"]["checked"]).includes("check_projectcoordinator")) && (!Object.values(window.saved_a["checkbox"]["checkbox_1"]["unchecked"]).includes("check_projectcoordinator"))) ? window.saved_a["checkbox"]["checkbox_1"]["unchecked"].push("check_projectcoordinator") : {};
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_3"]["checked"]).includes("check_darwincore")) && (!Object.values(window.saved_a["checkbox"]["checkbox_3"]["unchecked"]).includes("check_darwincore"))) ? window.saved_a["checkbox"]["checkbox_3"]["unchecked"].push("check_darwincore", "check_bioschemas", "check_schemaorg") : {};
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_FUNDINGPROGRAMME") ? {} : window.saved_a["replace"]["$_FUNDINGPROGRAMME"] = "action number or funding programme name";
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_ADDPROJECTCOORDINATOR") ? {} : window.saved_a["replace"]["$_ADDPROJECTCOORDINATOR"] = "Project Coordinator";
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_ADDACRONYM") ? {} : window.saved_a["replace"]["$_ADDACRONYM"] = "Add the acronym here";
}
catch (e) { };
try {
if (Object.keys(window.saved_a["replace"]).includes("$_PROJECT")) {
{Object.defineProperty(window.saved_a["replace"], "$_PROJECTNAME",
Object.getOwnPropertyDescriptor(window.saved_a["replace"], "$_PROJECT")); delete window.saved_a["replace"]["$_PROJECT"]}
} ;
}
catch (e) { };
try {
if (Object.keys(window.saved_a["replace"]).includes("$_dataofficer")) {
{Object.defineProperty(window.saved_a["replace"], "$_DATAOFFICER",
Object.getOwnPropertyDescriptor(window.saved_a["replace"], "$_dataofficer")); delete window.saved_a["replace"]["$_dataofficer"]}
} ;
}
catch (e) { };
try {
if (Object.keys(window.saved_a["replace"]).includes("$_proprietary")) {
{Object.defineProperty(window.saved_a["replace"], "$_PROPRIETARY",
Object.getOwnPropertyDescriptor(window.saved_a["replace"], "$_proprietary")); delete window.saved_a["replace"]["$_proprietary"]}
} ;
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_CREATIONDATE") ? {} : window.saved_a["replace"]["$_CREATIONDATE"] = "xxxx-xx-xx";
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_MODIFICATIONDATE") ? {} : window.saved_a["replace"]["$_MODIFICATIONDATE"] = "xxxx-xx-xx";
}
catch (e) { };
try {
Object.keys(window.saved_a["replace"]).includes("$_PARTNERS") ? {} : window.saved_a["replace"]["$_PARTNERS"] = "partner name";
}
catch (e) { };
try {
((!Object.values(window.saved_a["checkbox"]["checkbox_2"]["checked"]).includes("check_pangenomic")) && (!Object.values(window.saved_a["checkbox"]["checkbox_2"]["unchecked"]).includes("check_pangenomic"))) ? window.saved_a["checkbox"]["checkbox_2"]["unchecked"].push("check_pangenomic", "check_spatialtranscriptomic", "check_scrnaseq") : {};
}
catch (e) { };
}
function maDMPUpdate(){
const date = new Date(); // record the time
// update dmp meta data
saved_a["dmp"]["title"] = "DMP of " + saved_a["replace"]["$_PROJECTNAME"];
saved_a["dmp"]["contact"]["name"] = saved_a["replace"]["$_USERNAME"];
saved_a["dmp"]["contact"]["mbox"] = saved_a["replace"]["$_EMAIL"];
saved_a["dmp"]["created"] == "2018-07-23T10:10:23.6" ? saved_a["dmp"]["created"] = saved_a["replace"]["$_CREATIONDATE"] : {};
saved_a["dmp"]["modified"] = saved_a["replace"]["$_MODIFICATIONDATE"];
saved_a["dmp"]["submission"] = date.toISOString().slice(0, -3);
saved_a["dmp"]["version"] = saved_a["replace"]["$_DMPVERSION"];
saved_a["dmp"]["project"] ? {}:saved_a["dmp"]["project"] = {};
saved_a["dmp"]["project"]["title"] = saved_a["replace"]["$_PROJECTNAME"];
saved_a["dmp"]["project"]["contact"] = saved_a["replace"]["$_ADDPROJECTCOORDINATOR"];
saved_a["dmp"]["project"]["funding"] ? {}:saved_a["dmp"]["project"]["funding"] = {};
saved_a["dmp"]["project"]["funding"]["funder_id"] = dmpFunders[window.doc_name];
}
/**
* @function load_dmp
* @description General function for replace place holders in the document text.
* @param {reload_answers} a callback function that reloads all the answers.
* @param {string} the name of the template used for replacement.
* @global
*/
function load_dmp(callback = reload_answers, name = cached_template) {
translatePage(name);
punctualReplaced = false;
initialed ? scroll_y = document.getElementById("split-0").scrollTop + "" : {};
const options = { year: 'numeric', month: 'long', day: 'numeric' };
Object.keys(saved_a["replace"]).includes("$_DMPVERSION") ? {} : saved_a["replace"]["$_DMPVERSION"] = "1.0";
//document.getElementById("today_date").innerHTML = "<h3>"+date.toLocaleDateString('en-US', options)+"</h3>";
let frame = document.getElementById("doc3");
updateSavedAnswers();
if (convertedEle ==undefined){
callback(name);
}else if (doc_name == "user-defined"){
callback(name);
}
else if (doc_name != name){
callback(name);
}
else{
frame.innerHTML = convertedEle;
allCheckbox(), htmlFind_replace();
}
window.doc_name = name; // overwrite global variable doc_name
saved_a["update"]["storage"][0]["answer"]= {"replace": saved_a["replace"], "checkbox": saved_a["checkbox"] };
initialed = true;
syn_load_cache();
document.getElementById("editTemplate").href = "https://github.com/nfdi4plants/dataplan/blob/main/DMPDocs/"+doc_name+"-2024-11-22.js";
maDMPUpdate();
runWordCloud();
setTimeout(() => {
classicMode ? punctual(): {};
document.getElementById("split-0").scrollTop = scroll_y,
console.log("the window is scrolled to: " + scroll_y);
}, "150");
}
/**
* @function enter2tab
* @description press enter is equal to press tab
*
* @global
*/
function deb(log){
if (debug){
console.log(log)
}
}
function enter2tab() { // let enter function like tab
if (window.event && window.event.keyCode == 13) {
window.event.keyCode = 9;
}
}
////verbose console.log("is firefox ?"+is_firefox); // check if the firefox check works
/**
* @function consent
* @description show cookie consent page
*
* @global
*/
function consent() {
window.localStorage.setItem("cookie_consent", "yes");
if (user_info == null) {
setTimeout(function () {
window.innerWidth>maxWidth? tour.show() : {};
}, 500);
}
}
/**
* @function save_json
* @description save answers to JSON
*
* @global
*/
function save_json() {
saved_a["templateName"] = doc_name;
saved_a["templateText"] = dmpStrings[doc_name];
aJSONString = JSON.stringify(saved_a);
const blob = new Blob([aJSONString], {
type: "application/json"
});
saveAs(blob, "DataPLAN_DMP");
}
/**
* @function save_json
* @description save answers to JSON
*
* @global
*/
function exportHistory() {
aJSONString = JSON.stringify(inputHistory);
const blob = new Blob([aJSONString], {
type: "application/json"
});
saveAs(blob, "inputHistory");
}
/*============== tutorial initialization ends ==============*/
// event listener for text input (no need to press submit button anymore)
// compare updated answers and the original answers
/**
* @function compare_answers
* @description compare the previous answers and new answers
* @param old_a old answers
* @param new_a new answers
* @global
*/
function compare_answers(old_a, new_a) {
let unreplaced_keys = [];
let unsubmitted_checkbox = [];
let total_keywords = 0,
changed_keywords = 0,
total_checkboxes = 0,
changed_checkboxes = 0;
const old_replace = Object.entries(old_a["replace"]);
for (const [key, value] of old_replace) {
total_keywords++;
if ((new_a["replace"][key] != value) && (new_a["replace"][key] != "") && (new_a["replace"][key] != undefined)) {
changed_keywords++;
//verbose console.log(new_a["replace"][key]);
} else {
unreplaced_keys.push(key);
}
}
const old_checkbox = Object.entries(old_a["checkbox"]);
for (const [key, value] of old_checkbox) {
total_checkboxes++;
if (JSON.stringify(new_a["checkbox"][key]) != JSON.stringify(value)) {
//verbose console.log(new_a["checkbox"][key]);
changed_checkboxes++;
} else {
unsubmitted_checkbox.push(key);
}
}
const unchecked_options = new_a["checkbox"]["checkbox_1"]["unchecked"];
const uncheck_update = unchecked_options.includes("check_update");
if (uncheck_update) {
unreplaced_keys = unreplaced_keys.filter(item => item !== "$_UPDATEMONTH");
new_a["replace"]["$_UPDATEMONTH"] = "";
}
const check_previousprojects = unchecked_options.includes("check_previousprojects");
if (check_previousprojects) {
unreplaced_keys = unreplaced_keys.filter(item => item !== "$_PREVIOUSPROJECTS");
new_a["replace"]["$_PREVIOUSPROJECTS"] = "";
}
const check_proprietary = unchecked_options.includes("check_proprietary");
if (check_proprietary) {
unreplaced_keys = unreplaced_keys.filter(item => item !== "$_PROPRIETARY");
new_a["replace"]["$_PROPRIETARY"] = ""
}
let no_need_to_answer = uncheck_update + check_previousprojects + check_proprietary;
total_keywords = total_keywords - no_need_to_answer;
//verbose console.log("total_keys: " + total_keywords + "; changed_keywords: " + changed_keywords + "\n ; total_box " + total_checkboxes + ", changed_checkbox: " + changed_checkboxes + ", unreplaced_keys " + unreplaced_keys);
return [total_keywords, total_checkboxes, changed_keywords, changed_checkboxes, unreplaced_keys, unsubmitted_checkbox];
}
function compare_replace(old_a, new_a) {
let locala = JSON.parse(JSON.stringify(old_a["replace"]));
let unreplaced_keys = [];
let replaced_keys = [];
let total_keywords = 0,
changed_keywords = 0;
const language = dmpLanguage[doc_name]
document.getElementById("check_update").checked? locala["$_UPDATEMONTH"]=optional_temp[language]["$_UPDATEMONTH"] : {} ;
document.getElementById("check_previousprojects").checked? locala["$_PREVIOUSPROJECTS"]=optional_temp[language]["$_PREVIOUSPROJECTS"] : {} ;
document.getElementById("check_proprietary").checked? locala["$_PROPRIETARY"]=optional_temp[language]["$_PROPRIETARY"] : {} ;
document.getElementById("check_partners").checked? locala["$_PARTNERS"]=optional_temp[language]["$_PARTNERS"] : {} ;
document.getElementById("check_otherep").checked? locala["$_OTHEREP"]=optional_temp[language]["$_OTHEREP"] : {} ;
document.getElementById("check_acronym").checked? locala["$_ADDACRONYM"]=optional_temp[language]["$_ADDACRONYM"] : {};
document.getElementById("check_projectcoordinator").checked? locala["$_ADDPROJECTCOORDINATOR"]=optional_temp[language]["$_ADDPROJECTCOORDINATOR"] : {};
for (const [key, value] of Object.entries(locala)) {
total_keywords++;
if ((new_a["replace"][key] != value) && (new_a["replace"][key] != "") && (new_a["replace"][key] != undefined)) {
changed_keywords++;
replaced_keys.push(key);
//verbose console.log(new_a["replace"][key]);
} else {
unreplaced_keys.push(key);
}
}
//unreplaced_keys = unreplaced_keys.filter(item => item !== "$_PROPRIETARY").filter(item => item !== "$_PREVIOUSPROJECTS").filter(item => item !== "$_UPDATEMONTH").filter(item => item !== "$_DATAUTILITY");
return [total_keywords, 0, changed_keywords, 0, unreplaced_keys, [], replaced_keys];
}
function saveToLocalStorage(name = window.doc_name){
if (dmpLanguage[name] == dmpLanguage[doc_name]){
window["saved_a_"+dmpLanguage[name]]=saved_a;
}
window.localStorage.setItem("inputHistory", JSON.stringify(window.inputHistory));
dmpLanguage[name]=="en"? window.localStorage.setItem("saved_a", JSON.stringify(window.saved_a)): window.localStorage.setItem("saved_a_de", JSON.stringify(window.saved_a)) ;
}
/**
* @function onchange_replace
* @description old replace based on buttons
* @param child the element it was in
* @global
*/
function onchange_replace(child) {
const before = child.name.toUpperCase();
const after1 = child.value;
after = answerPunctual(after1)
child.value=after;
saved_a["replace"][before] = after;
inputReplace = inputHistory["replace"];
try{
inputReplace[before][0];
}catch(e){
inputReplace[before]= [];
}
inputBefore = inputReplace[before];
const now = new Date();
singleInputContent = [after, saved_a["replace"]["$_PROJECTNAME"], now.toISOString().slice(0,19), dmpLanguage[doc_name]];
inputBefore.push(singleInputContent);
//inputHistory["replace"][before] = inputBefore.filter((value, index, array) => array.indexOf(value) === index);
trim_saved_a(saved_a);
eleName = before.split("_")[1]+"-to-";
document.getElementsByName(eleName).forEach(e=>{e.innerText=after});
let unfinished = compare_replace(temp_a, saved_a);
let p_bar = document.getElementById("p-bar");
let percentage = (unfinished[2] + unfinished[3]) / (unfinished[0] + unfinished[1]) * 100;
if (percentage === 100 && old_percentage != 100) {
toast_list[6].show();
}
old_percentage = percentage;
p_bar.style.setProperty("width", Math.ceil(percentage) + "%");
p_bar.innerHTML = Math.ceil(percentage) + "%";
p_bar.setAttribute("aria-valuenow", Math.ceil(percentage));
saveToLocalStorage(doc_name);
}
function htmlFind_replace(){
for (const [key, value] of Object.entries( saved_a["replace"])){
eleName = key.split("_")[1]+"-to-";
document.getElementsByName(eleName).forEach(e=>{e.innerText=value});
let unfinished = compare_replace(temp_a, saved_a);
let p_bar = document.getElementById("p-bar");
let percentage = (unfinished[2] + unfinished[3]) / (unfinished[0] + unfinished[1]) * 100;
if (percentage === 100 && old_percentage != 100) {
toast_list[6].show();
}
old_percentage = percentage;
p_bar.style.setProperty("width", Math.ceil(percentage) + "%");
p_bar.innerHTML = Math.ceil(percentage) + "%";
p_bar.setAttribute("aria-valuenow", Math.ceil(percentage));
//console.log(key+" " + value)
}
}
function onchange_replace1(child) {
const before = child.name;
const after = child.value;
saved_a["replace"][before] = after;
load_dmp(reload_answers, doc_name);
}
function updateWC(status){
window.wordcloud = (status).toString();
localStorage.setItem("wordcloud", status);
load_dmp(reload_answers, doc_name);
}
function runWordCloud(){
if (window.wordcloud =="true"){
parseText();
console.log("word cloud")
}else{
try {
document.querySelector("#doc3").querySelector("#vis").remove();
} catch (error) {
}
}
}
/**
* @function trim_saved_a
* @description function to remove the "$_" of the text to avoid replace errors
* @param saved_a the element it was in
* @global
*/
// trim the "$_" to avoid infinite loops
function trim_saved_a(saved_a) {
const replace = Object.entries(saved_a["replace"]);
for (const [key, value] of replace) {
saved_a["replace"][key] = value.replace("$_", "")
}
}
// reload all the answers and save the answers to local storage
/**
* @function reload_answers
* @description function to reload all answers and refresh the document
* @global
*/
function reload_answers(name) {
answersManagement(name);
window.localStorage.setItem("template", name);
dmpEle.innerHTML = dmpStrings[name];
//let content = dmpEle.querySelector("#"+name);
//content.classList.add("content-page");
let frame = document.getElementById("doc3");
frame.innerHTML = dmpEle.innerHTML;
const selection = window.getSelection();
selection.removeAllRanges();
trim_saved_a(saved_a);
saveToLocalStorage(name);
const replace_input = Object.entries(saved_a["replace"]);
for (const [key, value1] of replace_input) {
value = answerPunctual(value1);
if (key !== "$_VISUALIZATION") {
let element = document.getElementsByName(key)[0];
//console.log(key + " "+value);
try {
element.value = value;
} catch (error) {
console.error(error);
element.value = "Error, can not parse the value, please first export the JSON and then import"
}
}
}
const checkbox_input = Object.entries(saved_a["checkbox"]);
for (const [key, value] of checkbox_input) {
let checkboxes = value;
try {
const checked = Object.entries(checkboxes["checked"]);
for (const [key, value] of checked) {
let element = document.getElementById(value.toLowerCase());
try {
element.checked = true;
} catch (error) {
console.error(error);
element.checked = false;
}
};
} catch (e) {
//verbose console.log("checked is null");
}
try {
const unchecked = Object.entries(checkboxes["unchecked"]);
for (const [key, value] of unchecked) {
//console.log("value = "+ value)
let element = document.getElementById(value.toLowerCase());
try {
element.checked = false;
} catch (error) {
console.error(error);
console.log(value.toLowerCase());
}
};
} catch (e) {
console.error(e)
//verbose console.log("unchecked is null");
}
}
checkboxConversion();
for (let answers in saved_a["replace"]) {
let singleOption = {};
singleOption[answers] = saved_a["replace"][answers];
//verbose console.log(singleOption);
const before = "$_" + answers.split("_")[1].toUpperCase() ;
find_replace(before, singleOption[answers]);
}
//verbose console.log("answer reload is finished");
issue_warning(name);
let unfinished = compare_replace(window.temp_a, saved_a);
let p_bar = document.getElementById("p-bar");
let percentage = (unfinished[2] + unfinished[3]) / (unfinished[0] + unfinished[1]) * 100;
if (percentage === 100 && old_percentage != 100) {
toast_list[6].show();
}
old_percentage = percentage;
p_bar.style.setProperty("width", Math.ceil(percentage) + "%");
p_bar.innerHTML = Math.ceil(percentage) + "%";
p_bar.setAttribute("aria-valuenow", Math.ceil(percentage));
let checkboxes = document.querySelectorAll(".form-check-input");
checkboxes.forEach(e => {
const classList = Array.from(e.classList);
const class_name = classList.filter((word)=> word.includes("checkbox_"))
if(class_name.length>0){
e.setAttribute("onfocusin", 'checkboxOnfocusin(this)');
e.setAttribute("onfocusout", 'checkboxOnfocusout(this)');
e.setAttribute("onmouseover", 'this.focus()');
e.setAttribute("onclick", ' sc1(this)');
e.setAttribute("name", e.id);
e.setAttribute("onchange", "get_option(this)");
}
}
);
checkboxSelection(),
allCheckbox();
convertedEle = document.getElementById("doc3").innerHTML;
//window.doc_name = name;
// e.setAttribute("onchange", "const col1 = new bootstrap.Collapse('."+id+"Repo', {toggle: false});if(this.checked == true){col1.show();}else{col1.hide();}");
}
function checkboxOnfocusin(ele){
const elem1 = document.querySelectorAll("."+ele.id);
elem1.forEach(e =>{ e.classList.add("border-highlight");
if(e.querySelector("li")!=null){e.querySelector("li").classList.add("border-highlight")} });
set_scrollbar_marker( scroll_marker,elem1 )
}
function checkboxOnfocusout(ele){
const elem2 = document.querySelectorAll("."+ele.id);
elem2.forEach(e => {e.classList.remove("border-highlight");
if(e.querySelector("li")!=null){e.querySelector("li").classList.remove("border-highlight")}});
let remove = Array.from(document.getElementsByName("scroll-bar-span"));
remove.forEach(e => {e.remove()})
}
function checkboxSelection(){