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Cant run pipeline with newer nextflow version #480

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nschcolnicov opened this issue Oct 16, 2024 · 1 comment
Closed

Cant run pipeline with newer nextflow version #480

nschcolnicov opened this issue Oct 16, 2024 · 1 comment
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bug Something isn't working

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@nschcolnicov
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nschcolnicov commented Oct 16, 2024 •
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Description of the bug

I see that the enable.dsl = 2 line was removed from the main.nf script, is this part of the new template?
https://github.com/nf-core/smrnaseq/pull/474/files

Command used and terminal output

nextflow run nf-core/smrnaseq -r dev -latest -profile bi,cluster,test_full --outdir results

Relevant files

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@nschcolnicov nschcolnicov added the bug Something isn't working label Oct 16, 2024
@apeltzer apeltzer added this to the 2.4.1 milestone Nov 18, 2024
@apeltzer apeltzer moved this to Todo - High Priority in smrnaseq Nov 18, 2024
@nschcolnicov
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This issue was related to my environment, not the pipeline, closing it

@github-project-automation github-project-automation bot moved this from Todo - High Priority to Done in smrnaseq Nov 20, 2024
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@apeltzer @nschcolnicov