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PHRED offset detection sometimes fails #341

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apeltzer opened this issue Apr 17, 2024 · 1 comment
Closed

PHRED offset detection sometimes fails #341

apeltzer opened this issue Apr 17, 2024 · 1 comment
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@apeltzer
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Description of the bug

IN rare cases with high quality illumina data, the pipeline fails due to unability to detect phred offset correctly. For such cases, it would be great to optionally add PHRED offsets to the file to correctly set PHRED offsets for FASTQ files.

This is currently then only used by mirtrace.

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@apeltzer apeltzer added the bug Something isn't working label Apr 17, 2024
@apeltzer apeltzer added this to the 2.3.1 milestone Apr 17, 2024
@apeltzer
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Fixed in #342

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@apeltzer