diff --git a/subworkflows/local/mirtrace.nf b/subworkflows/local/mirtrace.nf index 0d775a70..8a87e1c1 100644 --- a/subworkflows/local/mirtrace.nf +++ b/subworkflows/local/mirtrace.nf @@ -15,7 +15,7 @@ workflow MIRTRACE { ch_mirtrace_config = reads.map { adapter, ids, reads -> [ids,reads]} .transpose() - .collectFile { id, path -> "./${path.getFileName().toString()}",id,,"${params.phred_offset}\n" } // operations need a channel, so, should be outside the module + .collectFile { id, path -> "./${path.getFileName().toString()},${id},,${params.phred_offset}\n" } // operations need a channel, so, should be outside the module MIRTRACE_RUN ( reads,