From 8fb0ae060ca6596d9245fcbff6df4db2bf17513a Mon Sep 17 00:00:00 2001
From: Alexander Peltzer <alex.peltzer@gmail.com>
Date: Fri, 12 Jan 2024 10:54:45 +0000
Subject: [PATCH] Fix params.fasta

---
 workflows/smrnaseq.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflows/smrnaseq.nf b/workflows/smrnaseq.nf
index 314c8d75..ee62cb26 100644
--- a/workflows/smrnaseq.nf
+++ b/workflows/smrnaseq.nf
@@ -156,7 +156,7 @@ workflow SMRNASEQ {
     //
     if (params.with_umi){
         if (params.fasta){
-            fasta_ch = file(fasta)
+            fasta_ch = file(params.fasta)
             DEDUPLICATE_UMIS (
                 fasta_ch,
                 bt_index,