From 533a0f35e6e78d41b496f12af4f6004263a3b20f Mon Sep 17 00:00:00 2001 From: Gregor Sturm Date: Thu, 18 Jan 2024 10:16:06 +0100 Subject: [PATCH] Fix input cardinality --- subworkflows/local/umi_dedup.nf | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/subworkflows/local/umi_dedup.nf b/subworkflows/local/umi_dedup.nf index 4a7f80f9..f8981758 100644 --- a/subworkflows/local/umi_dedup.nf +++ b/subworkflows/local/umi_dedup.nf @@ -38,8 +38,8 @@ workflow DEDUPLICATE_UMIS { BAM_SORT_STATS_SAMTOOLS ( UMI_MAP_GENOME.out.bam, Channel.empty() ) ch_versions = ch_versions.mix(BAM_SORT_STATS_SAMTOOLS.out.versions) - //ch_umi_dedup = BAM_SORT_STATS_SAMTOOLS.out.bam.join(BAM_SORT_STATS_SAMTOOLS.out.bai) - UMITOOLS_DEDUP ( BAM_SORT_STATS_SAMTOOLS.out.bam, val_get_dedup_stats) + ch_umi_dedup = BAM_SORT_STATS_SAMTOOLS.out.bam.join(BAM_SORT_STATS_SAMTOOLS.out.bai) + UMITOOLS_DEDUP ( ch_umi_dedup, val_get_dedup_stats) ch_versions = ch_versions.mix(UMITOOLS_DEDUP.out.versions) ch_dedup_stats = ch_dedup_stats.mix(UMITOOLS_DEDUP.out.tsv_edit_distance).join(UMITOOLS_DEDUP.out.tsv_per_umi).join(UMITOOLS_DEDUP.out.tsv_umi_per_position)