From f5fcbbb2fe2521596c4d7b22a229214688eea84a Mon Sep 17 00:00:00 2001
From: Louis Le Nezet <louislenezet@gmail.com>
Date: Mon, 9 Dec 2024 10:41:13 +0100
Subject: [PATCH 1/4] Bump version

---
 assets/multiqc_config.yml | 4 ++--
 nextflow.config           | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
index 75c911d4..ebeb143f 100644
--- a/assets/multiqc_config.yml
+++ b/assets/multiqc_config.yml
@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/phaseimpute/releases/tag/1.0.0" target="_blank">nf-core/phaseimpute</a>
+  This report has been generated by the <a href="https://github.com/nf-core/phaseimpute/tree/dev" target="_blank">nf-core/phaseimpute</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/phaseimpute/1.0.0/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/phaseimpute/dev/docs/output" target="_blank">documentation</a>.
 report_section_order:
   "nf-core-phaseimpute-methods-description":
     order: -1000
diff --git a/nextflow.config b/nextflow.config
index ed39be1e..420e2d36 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -306,7 +306,7 @@ manifest {
     description     = """Phasing and imputation pipeline"""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=24.04.2'
-    version         = '1.0.0'
+    version         = '1.1.0dev'
     doi             = ''
 }
 

From 83d79463e64755ac70a490b4da6299b4f40833e5 Mon Sep 17 00:00:00 2001
From: Louis Le Nezet <louislenezet@gmail.com>
Date: Mon, 9 Dec 2024 10:43:03 +0100
Subject: [PATCH 2/4] Update Changelog

---
 CHANGELOG.md | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index af1f5a98..49dd07a7 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,16 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## v1.1.0dev
+
+### `Added`
+
+### `Changed`
+
+- [#166](https://github.com/nf-core/phaseimpute/pull/166) - Bump version to 1.1.0dev and update `CHANGELOG.md`.
+
+### `Fixed`
+
 ## v1.0.0 - Black Labrador [2024-12-09]
 
 Initial release of nf-core/phaseimpute, created with the [nf-core](https://nf-co.re/) template.

From 77c941d80c880c6e61c5ec2036e8acb157985d9e Mon Sep 17 00:00:00 2001
From: Louis Le Nezet <louislenezet@gmail.com>
Date: Thu, 19 Dec 2024 15:10:12 +0100
Subject: [PATCH 3/4] Fix depth issue

---
 nextflow_schema.json | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/nextflow_schema.json b/nextflow_schema.json
index fe1e75ae..0782dd80 100644
--- a/nextflow_schema.json
+++ b/nextflow_schema.json
@@ -85,7 +85,8 @@
             "default": "",
             "properties": {
                 "depth": {
-                    "type": "integer",
+                    "type": "number",
+                    "minimum": 0,
                     "description": "Depth of coverage for the simulated data",
                     "default": 1,
                     "fa_icon": "fas fa-list-ol"

From f80deef32b72cb44dd59adb5df385f23c6fe27b3 Mon Sep 17 00:00:00 2001
From: Louis Le Nezet <louislenezet@gmail.com>
Date: Thu, 19 Dec 2024 15:12:25 +0100
Subject: [PATCH 4/4] Update changelog

---
 CHANGELOG.md | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 49dd07a7..b46d29fb 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -13,6 +13,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### `Fixed`
 
+- [#166](https://github.com/nf-core/phaseimpute/pull/166) - Fix depth type to `number` to enable float.
+
 ## v1.0.0 - Black Labrador [2024-12-09]
 
 Initial release of nf-core/phaseimpute, created with the [nf-core](https://nf-co.re/) template.