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This derives from the fact that we only specify auspice_config_h1n1pdm.json for both HA and NA and we don't have an epitope mask for NA epitope sites. To fix this we need smarter layering of configs ala #5 or to expand out additional configs for lineage x segment combinations.
Currently, epitope (
ep
) and non-epitope (ne
) coloring for H1N1pdm NA is broken:The text was updated successfully, but these errors were encountered: