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RepEnrich has hg38 indices built but RepEnrich2 only has hg19. I built the hg38 indices using the hg38_repeatmasker_clean.txt file from RepEnrich1 using the setup script from RepEnrich2. I stuck them up on Dropbox RepEnrich2_setup_hg38.tar.gz if you want to grab them and add them to your Google Drive with the other indices.
I also made several quality of life improvements for RepEnrich2_setup.py, including the ability to pick up where you left off in case of a failure. I saw in the RepEnrich repository that there are some useful pull requests that never got addressed. Do you all accept pull requests?
The text was updated successfully, but these errors were encountered:
Heya!
RepEnrich has hg38 indices built but RepEnrich2 only has hg19. I built the hg38 indices using the hg38_repeatmasker_clean.txt file from RepEnrich1 using the setup script from RepEnrich2. I stuck them up on Dropbox RepEnrich2_setup_hg38.tar.gz if you want to grab them and add them to your Google Drive with the other indices.
I also made several quality of life improvements for RepEnrich2_setup.py, including the ability to pick up where you left off in case of a failure. I saw in the RepEnrich repository that there are some useful pull requests that never got addressed. Do you all accept pull requests?
The text was updated successfully, but these errors were encountered: