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blCSVMatrixIterator.hpp
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blCSVMatrixIterator.hpp
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#ifndef BL_CSVMATRIXITERATOR_HPP
#define BL_CSVMATRIXITERATOR_HPP
//-------------------------------------------------------------------
// FILE: blCSVMatrixIterator.hpp
// CLASS: blCSVMatrixIterator
// BASE CLASS: None
//
//
//
// PURPOSE: Custom iterator useful in parsing data from csv files
// and making it addressable like a numeric matrix
//
// -- The iterator assumes that the provided csv data is
// formatted such that it contains only valid numbers
// and if not it interprets that non-valid number as a
// zero
//
// -- The iterator assumes that the csv data has the same
// number of columns for every row, but it also provides
// a function that lets a user check whether that is true
//
// -- The iterator skips over empty row or empty columns
//
// -- If it finds two or more Row Tokens or Column Tokens
// next to each other it does not count that as a Row
// or as a column, it just skips over it
//
// -- This class and its functions are defined within
// the "blAlgorithmsLIB" namespace
//
//
//
// AUTHOR: Vincenzo Barbato
// http://www.barbatolabs.com
//
//
//
// LISENSE: MIT-LICENCE
// http://www.opensource.org/licenses/mit-license.php
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Includes needed for this file
//-------------------------------------------------------------------
#include <iterator>
#include <string>
#include <vector>
#include <cstddef>
#include <iostream>
#include <atomic>
#include <sstream>
#include "blEnumsAndConstants.hpp"
#include "blConvertToNumber.hpp"
#include "blCountAndFind.hpp"
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// NOTE: This class is defined within the blAlgorithmsLIB namespace
//-------------------------------------------------------------------
namespace blAlgorithmsLIB
{
//-------------------------------------------------------------------
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
class blCSVMatrixIterator
{
public: // Iterator traits
using iterator_category = std::random_access_iterator_tag;
using value_type = blNumberType;
using difference_type = std::ptrdiff_t;
using pointer = blNumberType*;
using reference = blNumberType&;
public: // Constructors and destructor
// No default constructor
blCSVMatrixIterator() = delete;
// Constructor from two iterators
// and row and column tokens
blCSVMatrixIterator(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter,
const std::string rowTokens = ";\r\n",
const std::string colTokens = " ,",
const blAdvancingIteratorMethod& advancingIteratorMethod = blAlgorithmsLIB::ROW_MAJOR);
// Default copy constructor
blCSVMatrixIterator(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator) = default;
// Destructor
~blCSVMatrixIterator();
public: // Assignment operators
// Default assignment operator
blCSVMatrixIterator<blDataIteratorType,blNumberType>& operator=(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator) = default;
public: // Conversion operators
// Operator to convert this class to bool
operator bool()const
{
return !(m_iter == m_endIter);
}
public: // Comparison operators
bool operator==(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator)const;
bool operator!=(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator)const;
public: // Access operators and functions
const blNumberType& operator[](const std::ptrdiff_t& index);
const blNumberType& operator()(const std::ptrdiff_t& index);
const blNumberType& at(const std::ptrdiff_t& index);
const blNumberType& operator()(const std::ptrdiff_t& rowIndex,
const std::ptrdiff_t& colIndex);
const blNumberType& at(const std::ptrdiff_t& rowIndex,
const std::ptrdiff_t& colIndex);
public: // Reference and Dereference operators
blNumberType* operator->();
const blNumberType& operator*()const;
public: // Arithmetic operators
blCSVMatrixIterator<blDataIteratorType,blNumberType>& operator+=(const std::ptrdiff_t& movement);
blCSVMatrixIterator<blDataIteratorType,blNumberType>& operator-=(const std::ptrdiff_t& movement);
blCSVMatrixIterator<blDataIteratorType,blNumberType>& operator++();
blCSVMatrixIterator<blDataIteratorType,blNumberType>& operator--();
blCSVMatrixIterator<blDataIteratorType,blNumberType> operator++(int);
blCSVMatrixIterator<blDataIteratorType,blNumberType> operator--(int);
blCSVMatrixIterator<blDataIteratorType,blNumberType> operator+(const std::ptrdiff_t& movement)const;
blCSVMatrixIterator<blDataIteratorType,blNumberType> operator-(const std::ptrdiff_t& movement)const;
// Operator used to "subtract"
// two pointers (it gives the
// distance)
std::ptrdiff_t operator-(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator)const;
public: // Public functions
// Function used to move the iterator by a
// user specified amount
// The iterator is moved "movement" data points
// from its current position in the csv data
// buffer
void moveIterator(std::ptrdiff_t movement,
const blAdvancingIteratorMethod& advancingIteratorMethod);
// Functions used to manually
// set the data iterators and
// the Row and Column Token
void setRowTokens(const std::string& rowTokens);
void setColTokens(const std::string& colTokens);
void setRowAndColTokens(const std::string& rowTokens,
const std::string& colTokens);
void setIterators(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter);
void setIterators(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter,
const std::string& rowTokens,
const std::string& colTokens);
// Function used to calculate the total
// number of rows in the provided serialized
// data
void calculateTotalNumberOfRowsAndColumns();
// Functions used to get this class' members
const blDataIteratorType& getBeginIter()const;
const blDataIteratorType& getEndIter()const;
const blDataIteratorType& getIter()const;
const blDataIteratorType& getFirstDataPointIter()const;
const blNumberType& getNumber()const;
const std::ptrdiff_t& rows()const;
const std::ptrdiff_t& cols()const;
const std::size_t& size()const;
const std::size_t& length()const;
const std::ptrdiff_t& rowIndex()const;
const std::ptrdiff_t& colIndex()const;
const std::string& rowTokens()const;
const std::string& colTokens()const;
const std::vector<std::string>& getColumnNames()const;
// Functions used to set/get
// the advancing iterator method
const blAdvancingIteratorMethod& getAdvancingIteratorMethod()const;
void setAdvancingIteratorMethod(const blAdvancingIteratorMethod& advancingIteratorMethod);
// Functions used to move the current
// iterator position to the beginning
// or to the end
blCSVMatrixIterator<blDataIteratorType,blNumberType>& moveToTheBeginning();
blCSVMatrixIterator<blDataIteratorType,blNumberType>& moveToTheEnd();
// Functions used to get the
// begin/end iterators so that
// this can be used in stl
// algorithms
blCSVMatrixIterator<blDataIteratorType,blNumberType> begin()const;
blCSVMatrixIterator<blDataIteratorType,blNumberType> end()const;
blCSVMatrixIterator<const blDataIteratorType,blNumberType> cbegin()const;
blCSVMatrixIterator<const blDataIteratorType,blNumberType> cend()const;
private: // Static functions/variables/constants
// Constant string used to find
// a "digit" or characters that
// would be used for digits
const static std::string s_digits;
protected: // Protected functions
// Virtual function used to convert
// the text we're currently pointing
// to into a number
// This function is virtual, which means
// that a derived class could override
// it to convert the text however they
// desire
virtual void convertToNumberFromCurrentPosition();
protected: // Protected variables
// Begin and end iterators
// used to know where the
// given buffer begins and
// ends
blDataIteratorType m_beginIter;
blDataIteratorType m_endIter;
// The iterator used to move through
// the buffer
blDataIteratorType m_iter;
// Iterator pointing to the place
// in the csv data where the first
// data point starts
blDataIteratorType m_firstDataPointIter;
// The converted number of where the
// iterator is currently pointing at
// in the buffer
blNumberType m_number;
// Current row and column indexes
// of where in the csv matrix data
// the iterator is pointing at as well
// as data point index when treated
// as a 1-d array
std::ptrdiff_t m_rowIndex;
std::ptrdiff_t m_colIndex;
std::ptrdiff_t m_dataIndex;
// Total number of data rows
// and columns per row in the
// csv data
std::ptrdiff_t m_rows;
std::ptrdiff_t m_cols;
// Total size of matrix (rows * cols)
std::size_t m_size;
// Tokens used to look for rows
// and columns in the csv data
std::string m_rowTokens;
std::string m_colTokens;
std::string m_rowAndColTokensCombined;
// Variable used to decide how to advance
// the iterator
blAdvancingIteratorMethod m_advancingIteratorMethod;
// Vector of strings holding
// the column names
std::vector<std::string> m_columnNames;
};
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Static constants definitions
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
const std::string blCSVMatrixIterator<blDataIteratorType,blNumberType>::s_digits = "-+.0123456789";
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Constructor from two iterators and token strings
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline blCSVMatrixIterator<blDataIteratorType,blNumberType>::blCSVMatrixIterator(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter,
const std::string rowTokens,
const std::string colTokens,
const blAdvancingIteratorMethod& advancingIteratorMethod)
{
setIterators(beginIter,
endIter,
rowTokens,
colTokens);
setAdvancingIteratorMethod(advancingIteratorMethod);
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Destructor
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline blCSVMatrixIterator<blDataIteratorType,blNumberType>::~blCSVMatrixIterator()
{
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Comparison operators
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline bool blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator==(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator)const
{
return (m_iter == csvMatrixIterator.getIter());
}
template<typename blDataIteratorType,
typename blNumberType>
inline bool blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator!=(const blCSVMatrixIterator<blDataIteratorType,blNumberType>& csvMatrixIterator)const
{
return (m_iter != csvMatrixIterator.getIter());
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Access operators and functions
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator[](const std::ptrdiff_t& index)
{
moveIterator(index - m_dataIndex,m_advancingIteratorMethod);
return m_number;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator()(const std::ptrdiff_t& index)
{
moveIterator(index - m_dataIndex,m_advancingIteratorMethod);
return m_number;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::at(const std::ptrdiff_t& index)
{
moveIterator(index - m_dataIndex,m_advancingIteratorMethod);
return m_number;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator()(const std::ptrdiff_t& rowIndex,
const std::ptrdiff_t& colIndex)
{
std::ptrdiff_t index = rowIndex * m_cols + colIndex;
moveIterator(index - m_dataIndex,ROW_MAJOR);
return m_number;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::at(const std::ptrdiff_t& rowIndex,
const std::ptrdiff_t& colIndex)
{
std::ptrdiff_t index = rowIndex * m_cols + colIndex;
moveIterator(index - m_dataIndex,ROW_MAJOR);
return m_number;
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Reference and Dereference operators
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline blNumberType* blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator->()
{
return &m_number;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blNumberType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::operator*()const
{
return m_number;
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Function used to manually set the data iterators and
// the token strings
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::setIterators(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter,
const std::string& rowTokens,
const std::string& colTokens)
{
m_beginIter = beginIter;
m_endIter = endIter;
m_iter = m_beginIter;
m_firstDataPointIter = m_beginIter;
m_rowTokens = rowTokens;
m_colTokens = colTokens;
m_rowAndColTokensCombined = m_rowTokens + m_colTokens;
m_number = 0;
calculateTotalNumberOfRowsAndColumns();
convertToNumberFromCurrentPosition();
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Functions used to manually set the data iterators and
// token strings
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::setRowTokens(const std::string& rowTokens)
{
setIterators(m_beginIter,
m_endIter,
rowTokens,
m_colTokens);
}
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::setColTokens(const std::string& colTokens)
{
setIterators(m_beginIter,
m_endIter,
m_rowTokens,
colTokens);
}
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::setRowAndColTokens(const std::string& rowTokens,
const std::string& colTokens)
{
setIterators(m_beginIter,
m_endIter,
rowTokens,
colTokens);
}
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::setIterators(const blDataIteratorType& beginIter,
const blDataIteratorType& endIter)
{
setIterators(beginIter,
endIter,
m_rowTokens,
m_colTokens);
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Function used to advance the iterator
// in a column-major way
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::moveIterator(std::ptrdiff_t movement,
const blAdvancingIteratorMethod& advancingIteratorMethod)
{
// If we need to move in a column major
// way we need to change the movement
if(advancingIteratorMethod == COL_MAJOR ||
advancingIteratorMethod == COL_PAGE_MAJOR)
{
// First we calculate the current index
// in terms of column major counting
std::ptrdiff_t dataIndex = m_colIndex * m_rows + m_rowIndex;
dataIndex += movement;
if(dataIndex < 0)
{
m_iter = m_firstDataPointIter;
m_rowIndex = 0;
m_colIndex = 0;
m_dataIndex = 0;
return;
}
else if(dataIndex >= m_size)
{
m_iter = m_endIter;
m_rowIndex = m_rows;
m_colIndex = m_cols;
m_dataIndex = m_size;
return;
}
std::ptrdiff_t newColIndex = dataIndex / m_rows;
std::ptrdiff_t newRowIndex = dataIndex % m_rows;
movement = (newRowIndex * m_cols + newColIndex) - m_dataIndex;
}
if(movement > 0)
{
int actualMovement = findBeginningOfNthDataPoint(m_iter,
m_endIter,
m_rowAndColTokensCombined.begin(),
m_rowAndColTokensCombined.end(),
false,
movement,
m_iter);
if(actualMovement < movement)
m_iter = m_endIter;
m_dataIndex += actualMovement;
m_rowIndex = m_dataIndex / m_cols;
m_colIndex = m_dataIndex % m_cols;
convertToNumberFromCurrentPosition();
}
else if(movement < 0)
{
int newDataPointToFind = m_dataIndex + movement;
if(newDataPointToFind < 0)
{
m_dataIndex = 0;
m_rowIndex = 0;
m_colIndex = 0;
m_iter = m_firstDataPointIter;
}
else
{
m_dataIndex = findBeginningOfNthDataPoint(m_firstDataPointIter,
m_endIter,
m_rowAndColTokensCombined.begin(),
m_rowAndColTokensCombined.end(),
false,
newDataPointToFind,
m_iter);
m_rowIndex = m_dataIndex / m_cols;
m_colIndex = m_dataIndex % m_cols;
}
convertToNumberFromCurrentPosition();
}
return;
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Function used to calculate the total number of rows
// in the provided csv data as well as the number of
// columns per row
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline void blCSVMatrixIterator<blDataIteratorType,blNumberType>::calculateTotalNumberOfRowsAndColumns()
{
// Here we attempt to find the
// first non-empty data row
auto titleRowBeginIter = m_endIter;
auto titleRowEndIter = m_endIter;
auto rowBeginIter = m_beginIter;
auto rowEndIter = m_beginIter;
int rowIndex = blAlgorithmsLIB::findBeginAndEndOfNthDataPoint(m_beginIter,
m_endIter,
m_rowTokens.begin(),
m_rowTokens.end(),
false,
0,
rowBeginIter,
rowEndIter);
// If we could not find a non-empty row
// we set everything to zero and quit
if(rowIndex < 0)
{
m_rows = 0;
m_cols = 0;
m_size = 0;
m_rowIndex = 0;
m_colIndex = 0;
m_dataIndex = 0;
m_columnNames.clear();
m_iter = m_endIter;
return;
}
// Since we successfully found the first
// non-empty row, we now check to see
// if that row contains non-numeric
// characters, meaning it is the title
// row
std::string purelyNumericalRowTokens = s_digits;
purelyNumericalRowTokens += m_colTokens;
auto firstNonNumericalIter = blAlgorithmsLIB::find_first_not_of(rowBeginIter,
rowEndIter,
purelyNumericalRowTokens.begin(),
purelyNumericalRowTokens.end(),
0);
if(firstNonNumericalIter == rowEndIter)
{
// This means that this csv has
// no title row, so we set the
// first data point iter to be
// the beginning of the first
// non-empty row
m_firstDataPointIter = rowBeginIter;
}
else
{
// This means that this csv does
// have a title row, so we set the
// first data point iter to be the
// beginning of the next (second)
// non-empty row
titleRowBeginIter = rowBeginIter;
titleRowEndIter = rowEndIter;
rowIndex = blAlgorithmsLIB::findBeginAndEndOfNthDataPoint(titleRowBeginIter,
m_endIter,
m_rowTokens.begin(),
m_rowTokens.end(),
false,
1,
rowBeginIter,
rowEndIter);
if(rowIndex == 1)
m_firstDataPointIter = rowBeginIter;
else
{
// This means we could not find
// any data rows, so we set
// everything to zero and quit
m_rows = 0;
m_cols = 0;
m_size = 0;
m_rowIndex = 0;
m_colIndex = 0;
m_dataIndex = 0;
m_columnNames.clear();
m_iter = m_endIter;
return;
}
}
// We assume the csv is properly formatted
// to represent a matrix and therefore
// only use the first row to count how many
// columns there are per each row
// NOTE: We DO NOT count empty columns where in the
// provided csv we have two or more following
// column tokens (for ex. "3,,4,4,5" would be
// 4 columns and not 5
m_rows = blAlgorithmsLIB::countDataRows(rowBeginIter,
m_endIter,
m_rowTokens.begin(),
m_rowTokens.end(),
false);
// We then use the first data row
// to count the number of data columns
m_cols = blAlgorithmsLIB::countDataRows(rowBeginIter,
rowEndIter,
m_colTokens.begin(),
m_colTokens.end(),
false);
m_size = m_cols * m_rows;
// We try to get the names
// of each column by parsing
// the title row if we found
// one
m_columnNames.clear();
std::ptrdiff_t numberOfColumnNames = blAlgorithmsLIB::countDataRows(titleRowBeginIter,
titleRowEndIter,
m_colTokens.begin(),
m_colTokens.end(),
false);
auto columnNameBeginIter = titleRowBeginIter;
auto columnNameEndIter = titleRowBeginIter;
for(int i = 0; i < numberOfColumnNames && i < m_cols; ++i)
{
blAlgorithmsLIB::findBeginAndEndOfNthDataPoint(titleRowBeginIter,
titleRowEndIter,
m_rowAndColTokensCombined.begin(),
m_rowAndColTokensCombined.end(),
false,
i,
columnNameBeginIter,
columnNameEndIter);
m_columnNames.push_back(std::string(columnNameBeginIter,columnNameEndIter));
}
}
//-------------------------------------------------------------------
//-------------------------------------------------------------------
// Functions used to get the class' members
//-------------------------------------------------------------------
template<typename blDataIteratorType,
typename blNumberType>
inline const blDataIteratorType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::getBeginIter()const
{
return m_beginIter;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blDataIteratorType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::getEndIter()const
{
return m_endIter;
}
template<typename blDataIteratorType,
typename blNumberType>
inline const blDataIteratorType& blCSVMatrixIterator<blDataIteratorType,blNumberType>::getIter()const
{
return m_iter;
}