From cf8bbe405238117691b44f1c54f5490f9a148d80 Mon Sep 17 00:00:00 2001 From: Sean Gloumeau Date: Thu, 26 Oct 2023 12:23:42 +0100 Subject: [PATCH] Added log loss classification metric (#199) --- lib/scholar/metrics/classification.ex | 107 ++++++++++++++++++++++++++ 1 file changed, 107 insertions(+) diff --git a/lib/scholar/metrics/classification.ex b/lib/scholar/metrics/classification.ex index 797d1cd6..64291aa2 100644 --- a/lib/scholar/metrics/classification.ex +++ b/lib/scholar/metrics/classification.ex @@ -13,6 +13,7 @@ defmodule Scholar.Metrics.Classification do import Nx.Defn, except: [assert_shape: 2, assert_shape_pattern: 2] import Scholar.Shared + import Scholar.Preprocessing alias Scholar.Integrate general_schema = [ @@ -161,6 +162,26 @@ defmodule Scholar.Metrics.Classification do ] ] + log_loss_schema = + general_schema ++ + [ + normalize: [ + type: :boolean, + default: true, + doc: """ + If `true`, return the mean loss over the samples. + Otherwise, return the sum of losses over the samples. + """ + ], + sample_weights: [ + type: {:custom, Scholar.Options, :weights, []}, + default: 1.0, + doc: """ + Sample weights of the observations. + """ + ] + ] + top_k_accuracy_score_schema = general_schema ++ [ @@ -203,6 +224,7 @@ defmodule Scholar.Metrics.Classification do ) @brier_score_loss_schema NimbleOptions.new!(brier_score_loss_schema) @accuracy_schema NimbleOptions.new!(accuracy_schema) + @log_loss_schema NimbleOptions.new!(log_loss_schema) @top_k_accuracy_score_schema NimbleOptions.new!(top_k_accuracy_score_schema) @zero_one_loss_schema NimbleOptions.new!(zero_one_loss_schema) @@ -1233,6 +1255,91 @@ defmodule Scholar.Metrics.Classification do 1 - Nx.sum(weights_matrix * cm) / Nx.sum(weights_matrix * expected) end + @doc """ + Computes the log loss, aka logistic loss or cross-entropy loss. + + The log-loss is a measure of how well a forecaster performs, with smaller + values being better. For each sample, a forecaster outputs a probability for + each class, from which the log loss is computed by averaging the negative log + of the probability forecasted for the true class over a number of samples. + + `y_true` should contain `num_classes` unique values, and the sum of `y_prob` + along axis 1 should be 1 to respect the law of total probability. + + ## Options + + #{NimbleOptions.docs(@log_loss_schema)} + + ## Examples + + iex> y_true = Nx.tensor([0, 0, 1, 1]) + iex> y_prob = Nx.tensor([[0.9, 0.1], [0.8, 0.2], [0.3, 0.7], [0.01, 0.99]]) + iex> Scholar.Metrics.Classification.log_loss(y_true, y_prob, num_classes: 2) + #Nx.Tensor< + f32 + 0.17380733788013458 + > + iex> Scholar.Metrics.Classification.log_loss(y_true, y_prob, num_classes: 2, normalize: false) + #Nx.Tensor< + f32 + 0.6952293515205383 + > + iex> weights = Nx.tensor([0.7, 2.3, 1.3, 0.34]) + iex(361)> Scholar.Metrics.Classification.log_loss(y_true, y_prob, num_classes: 2, sample_weights: weights) + #Nx.Tensor< + f32 + 0.22717177867889404 + > + """ + deftransform log_loss(y_true, y_prob, opts \\ []) do + log_loss_n( + y_true, + y_prob, + NimbleOptions.validate!(opts, @log_loss_schema) + ) + end + + defnp log_loss_n(y_true, y_prob, opts) do + assert_rank!(y_true, 1) + assert_rank!(y_prob, 2) + + if Nx.axis_size(y_true, 0) != Nx.axis_size(y_prob, 0) do + raise ArgumentError, "y_true and y_prob must have the same size along axis 0" + end + + num_classes = opts[:num_classes] + + if Nx.axis_size(y_prob, 1) != num_classes do + raise ArgumentError, "y_prob must have a size of num_classes along axis 1" + end + + weights = + validate_weights( + opts[:sample_weights], + Nx.axis_size(y_true, 0), + type: to_float_type(y_prob) + ) + + y_true_onehot = + ordinal_encode(y_true, num_classes: num_classes) + |> one_hot_encode(num_classes: num_classes) + + y_prob = Nx.clip(y_prob, 0, 1) + + sample_loss = + Nx.multiply(y_true_onehot, y_prob) + |> Nx.sum(axes: [-1]) + |> Nx.log() + |> Nx.negate() + + if opts[:normalize] do + Nx.weighted_mean(sample_loss, weights) + else + Nx.multiply(sample_loss, weights) + |> Nx.sum() + end + end + @doc """ Top-k Accuracy classification score.