diff --git a/subworkflows/local/sv.nf b/subworkflows/local/sv.nf index 678f1ef..3c5b778 100644 --- a/subworkflows/local/sv.nf +++ b/subworkflows/local/sv.nf @@ -99,7 +99,7 @@ workflow SV { emit: sv = BCFTOOLS_CONCAT_SV.out.vcf - sv_filtered = BCFTOOLS_CONCAT_SV.out.vcf + sv_filtered = BCFTOOLS_CONCAT_FILTERED_SV.out.vcf maf_file = ADD_MAF_COMMENT.out.maf portal = FORMAT_MAF.out.portal versions = ch_versions