diff --git a/scripts/run_param_config.py b/scripts/run_param_config.py index a35ab98..5bf9564 100644 --- a/scripts/run_param_config.py +++ b/scripts/run_param_config.py @@ -473,7 +473,8 @@ def get_ordered_dic(unordered_dic): MSKQ: "yes", MD: "yes" }, - "WholeExomeSequencing": { + "WES_Human": { + # WholeExomeSequencing BAITS: "/igo/home/igo/resources/ilist/hg38/IDT_Exome_v2_FP/IDT_Exome_v2_FP_BAITS.baits", TARGETS: "/igo/home/igo/resources/ilist/hg38/IDT_Exome_v2_FP/IDT_Exome_v2_FP_TARGETS.targets", MSKQ: "no", @@ -504,7 +505,7 @@ def get_ordered_dic(unordered_dic): MSKQ: "no", MD: "yes" }, - "IDT_Exome_v2_FP_Viral_Probes": { + "WES_Human": { # IDT_Exome_v2_FP_Viral_Probes or WES_Human BAITS: "/igo/home/igo/resources/ilist/hg38/IDT_Exome_v2_FP/IDT_Exome_v2_FP_BAITS.baits", TARGETS: "/igo/home/igo/resources/ilist/hg38/IDT_Exome_v2_FP/IDT_Exome_v2_FP_TARGETS.targets", @@ -612,7 +613,8 @@ def get_ordered_dic(unordered_dic): MSKQ: "no", MD: "yes" }, - "Twist_mWES": { + "WES_Mouse": { + # Twist_mWES BAITS: "/home/igo/resources/ilist/Twist_mWES/Twist_mWES_BAITS.IntervalList", TARGETS: "/home/igo/resources/ilist/Twist_mWES/Twist_mWES_TARGETS.IntervalList" },