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Internal NJ tree moves #163

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ms609 opened this issue Oct 30, 2024 · 0 comments
Open

Internal NJ tree moves #163

ms609 opened this issue Oct 30, 2024 · 0 comments

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@ms609
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ms609 commented Oct 30, 2024

cf https://www.biorxiv.org/content/10.1101/2024.10.28.620561v1.full.pdf

Machine learning is probably redundant for phylogenetic datasets.

Could do even better than Neighbour Joining with biorxiv.org/content/10.1101/2023.10.11.561902v2

Would probably need to be part of a broader rewriting of tree structure and thus SPR/TBR moves – which might also consider restructuring TBR as a pair of SPR moves.

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