NAMESPACE

# Generated by roxygen2: do not edit by hand

export(C_RogueNaRok)
export(ColByStability)
export(Cophenetic)
export(GraphGeodesic)
export(QuickRogue)
export(RogueTaxa)
export(TipInstability)
export(TipVolatility)
importFrom(Rdpack,reprompt)
importFrom(Rfast,Log)
importFrom(Rfast,rowMads)
importFrom(Rfast,rowVars)
importFrom(Rfast,rowmeans)
importFrom(TreeDist,ClusteringInfo)
importFrom(TreeDist,ConsensusInfo)
importFrom(TreeDist,PhylogeneticInfoDistance)
importFrom(TreeDist,SplitwiseInfo)
importFrom(TreeTools,CladisticInfo)
importFrom(TreeTools,Consensus)
importFrom(TreeTools,ConsensusWithout)
importFrom(TreeTools,DropTipPhylo)
importFrom(TreeTools,NTip)
importFrom(TreeTools,PectinateTree)
importFrom(TreeTools,Preorder)
importFrom(TreeTools,RenumberTips)
importFrom(TreeTools,SplitFrequency)
importFrom(TreeTools,TipLabels)
importFrom(ape,dist.nodes)
importFrom(ape,write.tree)
importFrom(cli,cli_alert_success)
importFrom(cli,cli_progress_bar)
importFrom(cli,cli_progress_done)
importFrom(cli,cli_progress_update)
importFrom(fastmatch,"%fin%")
importFrom(fastmatch,fmatch)
importFrom(grDevices,hcl.colors)
importFrom(matrixStats,rowMedians)
importFrom(stats,cmdscale)
importFrom(stats,setNames)
importFrom(utils,capture.output)
importFrom(utils,combn)
importFrom(utils,read.table)
useDynLib(Rogue, .registration = TRUE)