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First off this program is awesome. I am trying to follow the example on "progressiveMauve CLI Workflow Example" to make sure I dont do anything silly if I free style. I made a conda envirnment specifically for this like in the instrcutions but I get an error message and it quits out. I have no idea whats wrong.
Run progressiveMauve alignment.
Storing raw sequence at /tmp/rawseq16801.000
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_000913.gbk 4641652 base pairs.
Storing raw sequence at /tmp/rawseq16801.001
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_002695.gbk 5498450 base pairs.
Storing raw sequence at /tmp/rawseq16801.002
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_011751.gbk 5202090 base pairs.
Storing raw sequence at /tmp/rawseq16801.003
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_011750.gbk 5132068 base pairs.
Using weight 15 mers for initial seeds
Creating sorted mer list
Caught signal 11
Cleaning up and exiting!
Temporary files deleted.
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Hello =)
First off this program is awesome. I am trying to follow the example on "progressiveMauve CLI Workflow Example" to make sure I dont do anything silly if I free style. I made a conda envirnment specifically for this like in the instrcutions but I get an error message and it quits out. I have no idea whats wrong.
Run progressiveMauve alignment.
Storing raw sequence at /tmp/rawseq16801.000
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_000913.gbk 4641652 base pairs.
Storing raw sequence at /tmp/rawseq16801.001
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_002695.gbk 5498450 base pairs.
Storing raw sequence at /tmp/rawseq16801.002
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_011751.gbk 5202090 base pairs.
Storing raw sequence at /tmp/rawseq16801.003
Sequence loaded successfully.
pmauve_example1/pmauve_result/seqfiles/NC_011750.gbk 5132068 base pairs.
Using weight 15 mers for initial seeds
Creating sorted mer list
Caught signal 11
Cleaning up and exiting!
Temporary files deleted.
What does signal 11 mean?
if anyone has any idea.
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