From 948f37c25495520bfe1717fe862cd63e08d50757 Mon Sep 17 00:00:00 2001 From: TomConlin Date: Fri, 4 Oct 2019 12:51:18 -0700 Subject: [PATCH 1/4] generate file missed in the dataset PR --- translationtable/generated/curiemap_prefix.txt | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/translationtable/generated/curiemap_prefix.txt b/translationtable/generated/curiemap_prefix.txt index f18702db..1c009c28 100644 --- a/translationtable/generated/curiemap_prefix.txt +++ b/translationtable/generated/curiemap_prefix.txt @@ -43,6 +43,7 @@ "EOM_IMG" "ERO" "EcoGene" +"EnsemblGenome" "FBbt" "FBcv" "FBdv" @@ -53,6 +54,7 @@ "GINAS" "GO" "GO_REF" +"GWAS" "GenBank" "Genatlas" "GeneReviews" @@ -97,6 +99,7 @@ "MedGen" "MonarchArchive" "MonarchData" +"MonarchLogoRepo" "NBO" "NCBIAssembly" "NCBIGene" @@ -170,6 +173,7 @@ "catfishQTL" "cattleQTL" "chickenQTL" +"cito" "dbSNP" "dbSNPIndividual" "dbVar" @@ -189,7 +193,10 @@ "rainbow_troutQTL" "rdf" "rdfs" +"schemaorg" "sheepQTL" "skos" +"vfb" +"void" "xml" "xsd" From cfc5a43ff49010f4c057ac9170d3448460e9542b Mon Sep 17 00:00:00 2001 From: TomConlin Date: Fri, 4 Oct 2019 12:56:47 -0700 Subject: [PATCH 2/4] add obo unique label predicate, fix disorder due to header mis labeling --- translationtable/GLOBAL_TERMS.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/translationtable/GLOBAL_TERMS.yaml b/translationtable/GLOBAL_TERMS.yaml index fdc5a8bb..f129a809 100644 --- a/translationtable/GLOBAL_TERMS.yaml +++ b/translationtable/GLOBAL_TERMS.yaml @@ -61,7 +61,7 @@ "description": "dc:description", "source": "dc:source", "title (dce)": "dc:title", -# "Data Catalog Vocabulary": "dcat" +# "Data Catalog Vocabulary": "dcat:!!!" "distribution": "dcat:Distribution", # "dublin core terms": "dcterms:!!!", "identifier": "dcterms:identifier", @@ -288,6 +288,7 @@ "photograph": "IAO:0000185", "document": "IAO:0000310", "publication": "IAO:0000311", +"OBO foundry unique label": "IAO:0000589", "term replaced by": "IAO:0100001", # "Medical Subject Headings": "MESH:!!!", "Dwarfism": "MESH:D004392", From 880dbde2bb9ec11cfdedebb06d8382872bd64e28 Mon Sep 17 00:00:00 2001 From: TomConlin Date: Fri, 4 Oct 2019 16:02:13 -0700 Subject: [PATCH 3/4] clean up messes --- translationtable/this identifier.yaml | 3 --- 1 file changed, 3 deletions(-) delete mode 100644 translationtable/this identifier.yaml diff --git a/translationtable/this identifier.yaml b/translationtable/this identifier.yaml deleted file mode 100644 index 51e402e3..00000000 --- a/translationtable/this identifier.yaml +++ /dev/null @@ -1,3 +0,0 @@ ---- -# this identifier.yaml -"": "" # example From b7b3a2241e448904eca0d5535561d90e9dd7a1d6 Mon Sep 17 00:00:00 2001 From: TomConlin Date: Fri, 4 Oct 2019 16:11:05 -0700 Subject: [PATCH 4/4] clean up messes --- translationtable/someid.yaml | 3 --- 1 file changed, 3 deletions(-) delete mode 100644 translationtable/someid.yaml diff --git a/translationtable/someid.yaml b/translationtable/someid.yaml deleted file mode 100644 index fb630821..00000000 --- a/translationtable/someid.yaml +++ /dev/null @@ -1,3 +0,0 @@ ---- -# someid.yaml -"": "" # example