diff --git a/doc/short_vignettes/mutationdominance_vignette.md b/doc/short_vignettes/mutationdominance_vignette.md index 76cbe3ecf..cefad7de0 100644 --- a/doc/short_vignettes/mutationdominance_vignette.md +++ b/doc/short_vignettes/mutationdominance_vignette.md @@ -64,7 +64,7 @@ p = { "recregions": [fwdpy11.PoissonInterval(0, 1., rho / float(4 * pop.N))], "rates": (0.0, 1e-3, None), "prune_selected": False, - "demography": None, + "demography": fwdpy11.ForwardDemesGraph.tubes([pop.N], burnin=10), "simlen": 10 * pop.N, } params = fwdpy11.ModelParams(**p) diff --git a/doc/short_vignettes/neutralmutsafter_vignette.md b/doc/short_vignettes/neutralmutsafter_vignette.md index 6735cd6df..e411fa0dd 100644 --- a/doc/short_vignettes/neutralmutsafter_vignette.md +++ b/doc/short_vignettes/neutralmutsafter_vignette.md @@ -42,7 +42,7 @@ p = { "recregions": [fwdpy11.PoissonInterval(0, 1., rho / float(4 * pop.N))], "rates": (0.0, 1e-3, None), "prune_selected": False, - "demography": None, + "demography": fwdpy11.ForwardDemesGraph.tubes([pop.N], burnin=10), "simlen": 10 * pop.N, } params = fwdpy11.ModelParams(**p) diff --git a/doc/short_vignettes/poptour_vignette.md b/doc/short_vignettes/poptour_vignette.md index 00f890f72..4b7030113 100644 --- a/doc/short_vignettes/poptour_vignette.md +++ b/doc/short_vignettes/poptour_vignette.md @@ -46,7 +46,7 @@ p = { "recregions": [fwdpy11.PoissonInterval(0, 1., rho / float(4 * pop.N))], "rates": (0.0, 1e-3, None), "prune_selected": False, - "demography": None, + "demography": fwdpy11.ForwardDemesGraph.tubes([pop.N], burnin=10), "simlen": 10 * pop.N, } params = fwdpy11.ModelParams(**p) diff --git a/doc/short_vignettes/recapitation.md b/doc/short_vignettes/recapitation.md index 2cc6fd3f7..032ea6ac8 100644 --- a/doc/short_vignettes/recapitation.md +++ b/doc/short_vignettes/recapitation.md @@ -30,6 +30,7 @@ pop = fwdpy11.DiploidPopulation(100, 1000.0) pdict = {"rates": (0.0, 0.0, 0.0), "gvalue": fwdpy11.Multiplicative(2.), "simlen": 10, + "demography": fwdpy11.ForwardDemesGraph.tubes([100], burnin=10, burnin_is_exact=True), } params = fwdpy11.ModelParams(**pdict) rng = fwdpy11.GSLrng(54321)