From 49458d73887f395cdf5d0d7de1b24cfedd4fd348 Mon Sep 17 00:00:00 2001 From: mmagnus Date: Wed, 14 Sep 2022 15:31:21 +0200 Subject: [PATCH] modified: README.md --- README.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 245e2be01..1f8ccc7a5 100644 --- a/README.md +++ b/README.md @@ -92,13 +92,13 @@ https://doi.org/10.1093/nar/gkac372 **22-03-31** rna-tools goes online, http://rna-tools.online -**21-05-24** spotifier branched out into own repository to keep RT light https://github.com/mmagnus/yeast-spotifier +**21-05-24** spotifier branched out into own repository to keep RT light https://github.com/mmagnus/yeast-spotifier **20-10/12** [mqapRNA](https://github.com/mmagnus/rna-tools/blob/master/notes/mq.ipynb): py3 wrappers and include them in RT: RASP, Dfire, RNA3DCNN, QRNA, FARNA(Rosetta), AnalyzeGeometry, ClashScore, eSCORE (barnaba), 3dRNAscore, RNAkb (5pt) **20-08-20** A new structures of splicesome processed with rna-tools to be easily viewed with PyMOL (or as single chains) [PyMOL4Spliceosome](https://github.com/mmagnus/PyMOL4Spliceosome) -**20-06-18** A new tool, [spotifier](https://github.com/mmagnus/rna-tools/tree/master/rna_tools/tools/spotifier), to process yeast plate images into figures +**20-06-18** A new tool, [spotifier](https://github.com/mmagnus/yeast-spotifier), to process yeast plate images into figures **20-03-21** [PyMOL Preview Generator](https://github.com/mmagnus/rna-tools/tree/master/rna_tools/tools/pymol_preview_generator) a new tool for generation of previews in Finders created :-) @@ -118,7 +118,7 @@ M. Magnus, M., Kappel, K., Das, R., & Bujnicki, J. M. (2019). RNA 3D structure p **19-06-15** rna-tools used for spliceosome! :-) is accepted for publication! See [this folder](https://github.com/mmagnus/rna-tools/tree/master/U6MolCell) for the description of the analysis! -Eysmont, K., Matylla-Kulinska, K., Jaskulska, A., Magnus, M., & Konarska, M. M. (2018). Rearrangements within the U6 snRNA core at the transition between the two catalytic steps of splicing. Molecular Cell https://github.com/mmagnus/rna-tools/tree/master/U6MolCell https://www.cell.com/molecular-cell/pdfExtended/S1097-2765(19)30390-9 +Eysmont, K., Matylla-Kulinska, K., Jaskulska, A., Magnus, M., & Konarska, M. M. (2019). Rearrangements within the U6 snRNA core at the transition between the two catalytic steps of splicing. Molecular Cell https://github.com/mmagnus/rna-tools/tree/master/U6MolCell https://www.cell.com/molecular-cell/pdfExtended/S1097-2765(19)30390-9 See also [CHANGELOG](https://github.com/mmagnus/rna-tools/blob/master/CHANGELOG.md). @@ -491,7 +491,7 @@ The index in a form of a searchable table can be found [here](https://github.com ### Tertiary structure formats -1. diffpdb - a simple tool to compare text-content of PDB files, 1. `rna_pdb_merge_into_one.py` - merge single files into an NMR-style multiple model file PDB file.