From 31cfcd5a7ec9ca610727b68cf936d380a123e806 Mon Sep 17 00:00:00 2001 From: mmagnus Date: Thu, 21 Jul 2022 19:36:43 +0200 Subject: [PATCH] trx: remove for now, it's messing up the repo --- rna_tools/tools/triplexibility/.gitignore | 2 - rna_tools/tools/triplexibility/data/XcWWX.csv | 13 - .../tools/triplexibility/data/cWW_cHS_GCU.csv | 3 - rna_tools/tools/triplexibility/data/db.csv | 60 - .../tools/triplexibility/data/db_trx2.csv | 307 - ...1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv | 60 - ...1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb | 67 - rna_tools/tools/triplexibility/db/gendb.py | 11 - .../tools/triplexibility/download-all-pdbs.py | 57 - .../triplexibility/download-all-triples.py | 29 - .../tools/triplexibility/download-all.py | 41 - rna_tools/tools/triplexibility/lib.py | 205 - .../tools/triplexibility/process_triple.py | 100 - rna_tools/tools/triplexibility/readme.md | 11 - rna_tools/tools/triplexibility/readme.txt | 3 - rna_tools/tools/triplexibility/splix.py | 134 - rna_tools/tools/triplexibility/test.sh | 5 - rna_tools/tools/triplexibility/test_all.sh | 43 - rna_tools/tools/triplexibility/triple-db.csv | 7206 ----------------- .../tools/triplexibility/triplexibility.py | 411 - .../tools/triplexibility/triplexibility2.py | 354 - .../tools/triplexibility/trx-mutget-t1-1.py | 41 - .../tools/triplexibility/trx-mutget-t1-2.py | 37 - rna_tools/tools/triplexibility/trx.py | 221 - rna_tools/tools/triplexibility/trx_mutagen.py | 47 - .../triplexibility/trx_mutagen_allvsall.py | 46 - rna_tools/tools/triplexibility/trx_score.py | 138 - .../triplexibility/trx_score_allvsall.py | 105 - .../tools/triplexibility/trx_score_growth.py | 52 - .../tools/triplexibility/trx_score_onCol.py | 126 - .../trx_score_onCol_allvsall.py | 126 - setup.py | 9 - 32 files changed, 10070 deletions(-) delete mode 100644 rna_tools/tools/triplexibility/.gitignore delete mode 100644 rna_tools/tools/triplexibility/data/XcWWX.csv delete mode 100644 rna_tools/tools/triplexibility/data/cWW_cHS_GCU.csv delete mode 100644 rna_tools/tools/triplexibility/data/db.csv delete mode 100644 rna_tools/tools/triplexibility/data/db_trx2.csv delete mode 100644 rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv delete mode 100755 rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb delete mode 100755 rna_tools/tools/triplexibility/db/gendb.py delete mode 100644 rna_tools/tools/triplexibility/download-all-pdbs.py delete mode 100755 rna_tools/tools/triplexibility/download-all-triples.py delete mode 100644 rna_tools/tools/triplexibility/download-all.py delete mode 100644 rna_tools/tools/triplexibility/lib.py delete mode 100755 rna_tools/tools/triplexibility/process_triple.py delete mode 100644 rna_tools/tools/triplexibility/readme.md delete mode 100644 rna_tools/tools/triplexibility/readme.txt delete mode 100755 rna_tools/tools/triplexibility/splix.py delete mode 100755 rna_tools/tools/triplexibility/test.sh delete mode 100644 rna_tools/tools/triplexibility/test_all.sh delete mode 100644 rna_tools/tools/triplexibility/triple-db.csv delete mode 100755 rna_tools/tools/triplexibility/triplexibility.py delete mode 100755 rna_tools/tools/triplexibility/triplexibility2.py delete mode 100755 rna_tools/tools/triplexibility/trx-mutget-t1-1.py delete mode 100755 rna_tools/tools/triplexibility/trx-mutget-t1-2.py delete mode 100755 rna_tools/tools/triplexibility/trx.py delete mode 100755 rna_tools/tools/triplexibility/trx_mutagen.py delete mode 100755 rna_tools/tools/triplexibility/trx_mutagen_allvsall.py delete mode 100755 rna_tools/tools/triplexibility/trx_score.py delete mode 100755 rna_tools/tools/triplexibility/trx_score_allvsall.py delete mode 100755 rna_tools/tools/triplexibility/trx_score_growth.py delete mode 100755 rna_tools/tools/triplexibility/trx_score_onCol.py delete mode 100755 rna_tools/tools/triplexibility/trx_score_onCol_allvsall.py diff --git a/rna_tools/tools/triplexibility/.gitignore b/rna_tools/tools/triplexibility/.gitignore deleted file mode 100644 index ced6122de..000000000 --- a/rna_tools/tools/triplexibility/.gitignore +++ /dev/null @@ -1,2 +0,0 @@ -db/* -*__aligned* \ No newline at end of file diff --git a/rna_tools/tools/triplexibility/data/XcWWX.csv b/rna_tools/tools/triplexibility/data/XcWWX.csv deleted file mode 100644 index f2a3cef1d..000000000 --- a/rna_tools/tools/triplexibility/data/XcWWX.csv +++ /dev/null @@ -1,13 +0,0 @@ -fn,rmsd -Triple_cWW_cHS_GCU_exemplar_rpr.pdb,0.0 -Triple_cWW_cHS_GCU_rpr.pdb,1.72 -Triple_cWW_tHH_GCU_rpr.pdb,3.01 -Triple_cWW_tHH_GCU_exemplar_rpr.pdb,3.03 -Triple_cWW_tHS_GCU_rpr.pdb,3.46 -Triple_cWW_cSS_GCU_rpr.pdb,3.51 -Triple_cWW_cSS_GCU_exemplar_rpr.pdb,3.6 -Triple_cWW_cSW_GCU_rpr.pdb,3.78 -Triple_cWW_cSH_GCU_rpr.pdb,3.97 -Triple_cWW_cSH_GCU_exemplar_rpr.pdb,4.0 -Triple_cWW_cSW_GCU_exemplar_rpr.pdb,4.25 -Triple_cWW_tSW_GCU_rpr.pdb,4.69 diff --git a/rna_tools/tools/triplexibility/data/cWW_cHS_GCU.csv b/rna_tools/tools/triplexibility/data/cWW_cHS_GCU.csv deleted file mode 100644 index a311b15c6..000000000 --- a/rna_tools/tools/triplexibility/data/cWW_cHS_GCU.csv +++ /dev/null @@ -1,3 +0,0 @@ -fn,rmsd -Triple_cWW_cHS_GCU_exemplar_rpr.pdb,0.0 -Triple_cWW_cHS_GCU_rpr.pdb,1.72 diff --git a/rna_tools/tools/triplexibility/data/db.csv b/rna_tools/tools/triplexibility/data/db.csv deleted file mode 100644 index 8411d546c..000000000 --- a/rna_tools/tools/triplexibility/data/db.csv +++ /dev/null @@ -1,60 +0,0 @@ -fn,rmsd -Triple_cWW_cHS_GCU_exemplar_rpr.pdb,0.0 -Triple_cWW_cHS_GCU_rpr.pdb,1.72 -Triple_tWW_cSS_GCU_rpr.pdb,2.62 -Triple_tHW_cHS_GCU_rpr.pdb,2.66 -Triple_cWW_tHH_GCU_rpr.pdb,3.01 -Triple_cWW_tHH_GCU_exemplar_rpr.pdb,3.03 -Triple_cSW_cHS_GCU_rpr.pdb,3.17 -Triple_tSW_cHS_GCU_rpr.pdb,3.34 -Triple_tWW_cSH_GCU_rpr.pdb,3.44 -Triple_tWW_cHS_GCU_rpr.pdb,3.46 -Triple_cWW_tHS_GCU_rpr.pdb,3.46 -Triple_cWW_cSS_GCU_rpr.pdb,3.51 -Triple_cHW_cSS_GCU_rpr.pdb,3.55 -Triple_tHH_cSW_GCU_rpr.pdb,3.59 -Triple_cWW_cSS_GCU_exemplar_rpr.pdb,3.6 -Triple_tWW_tHS_GCU_rpr.pdb,3.66 -Triple_tSW_cSW_GCU_rpr.pdb,3.68 -Triple_tWW_tHH_GCU_rpr.pdb,3.69 -Triple_tHW_cSW_GCU_rpr.pdb,3.7 -Triple_cSW_tHH_GCU_rpr.pdb,3.74 -Triple_cWW_cSW_GCU_rpr.pdb,3.78 -Triple_cSW_cSS_GCU_rpr.pdb,3.84 -Triple_cSW_cSW_GCU_rpr.pdb,3.86 -Triple_cWW_cSH_GCU_rpr.pdb,3.97 -Triple_cWW_cSH_GCU_exemplar_rpr.pdb,4.0 -Triple_tWW_cSW_GCU_rpr.pdb,4.06 -Triple_cHW_cHS_GCU_rpr.pdb,4.07 -Triple_cSW_tHS_GCU_rpr.pdb,4.07 -Triple_tHW_tHH_GCU_rpr.pdb,4.07 -Triple_tHH_tSW_GCU_rpr.pdb,4.09 -Triple_tHW_tHS_GCU_rpr.pdb,4.13 -Triple_tSW_tSW_GCU_rpr.pdb,4.15 -Triple_cSW_cSH_GCU_rpr.pdb,4.22 -Triple_cWW_cSW_GCU_exemplar_rpr.pdb,4.25 -Triple_tSW_tHH_GCU_rpr.pdb,4.27 -Triple_cHW_tHH_GCU_rpr.pdb,4.34 -Triple_tSW_cSS_GCU_rpr.pdb,4.35 -Triple_cHW_tHS_GCU_rpr.pdb,4.37 -Triple_tHH_cSS_GCU_rpr.pdb,4.42 -Triple_tHW_tSW_GCU_rpr.pdb,4.43 -Triple_tHW_cSS_GCU_rpr.pdb,4.44 -Triple_tHH_cSH_GCU_rpr.pdb,4.52 -Triple_cSW_tSW_GCU_rpr.pdb,4.52 -Triple_tSW_cSH_GCU_rpr.pdb,4.58 -Triple_tHW_cSH_GCU_rpr.pdb,4.65 -Triple_cSH_cSW_GCU_rpr.pdb,4.67 -Triple_cWW_tSW_GCU_rpr.pdb,4.69 -Triple_cHW_cSH_GCU_rpr.pdb,4.69 -Triple_cSH_tSW_GCU_rpr.pdb,4.92 -Triple_cHH_cSW_GCU_rpr.pdb,5.04 -Triple_cHH_cSH_GCU_rpr.pdb,5.05 -Triple_cHH_tSW_GCU_rpr.pdb,5.07 -Triple_cHW_cSW_GCU_rpr.pdb,5.15 -Triple_cHH_cSS_GCU_rpr.pdb,5.2 -Triple_tSW_tHS_GCU_rpr.pdb,5.43 -Triple_tWW_tSW_GCU_rpr.pdb,5.54 -Triple_cSH_cSH_GCU_rpr.pdb,5.78 -Triple_cSH_cSS_GCU_rpr.pdb,5.88 -Triple_cHW_tSW_GCU_rpr.pdb,5.9 diff --git a/rna_tools/tools/triplexibility/data/db_trx2.csv b/rna_tools/tools/triplexibility/data/db_trx2.csv deleted file mode 100644 index 065fe9d2e..000000000 --- a/rna_tools/tools/triplexibility/data/db_trx2.csv +++ /dev/null @@ -1,307 +0,0 @@ -fn,rmsd -Triple_cWW_cHS_GCU_exemplar_rpr.pdb,0.0 -Triple_cWW_cHS_GCU_rpr.pdb,1.72 -Triple_cWW_cSH_GUC_rpr.pdb,1.94 -Triple_tWW_cHW_UGC_rpr.pdb,2.55 -Triple_tWW_cSS_GCU_rpr.pdb,2.62 -Triple_tHW_cHS_GCU_rpr.pdb,2.66 -Triple_tSW_cSH_GUC_rpr.pdb,2.78 -Triple_tWW_tSW_CGU_rpr.pdb,2.87 -Triple_tWW_cSW_UCG_rpr.pdb,2.92 -Triple_tSW_cSW_UCG_rpr.pdb,2.92 -Triple_cWW_tHH_GCU_rpr.pdb,3.01 -Triple_cWW_tSW_UGC_exemplar_rpr.pdb,3.02 -Triple_cSW_cSW_UGC_rpr.pdb,3.02 -Triple_cWW_cSS_GUC_rpr.pdb,3.03 -Triple_cWW_tHH_GCU_exemplar_rpr.pdb,3.03 -Triple_tWW_cSH_GUC_rpr.pdb,3.07 -Triple_cSW_cHS_GCU_rpr.pdb,3.17 -Triple_cWW_cSW_GUC_rpr.pdb,3.17 -Triple_cWW_cSW_UCG_rpr.pdb,3.19 -Triple_tWW_tSW_GUC_rpr.pdb,3.22 -Triple_tSH_cSW_UCG_rpr.pdb,3.25 -Triple_tSW_cHS_GCU_rpr.pdb,3.34 -Triple_tWW_tSH_CGU_rpr.pdb,3.35 -Triple_cHW_cSH_GUC_rpr.pdb,3.35 -Triple_tHW_tSW_GUC_rpr.pdb,3.36 -Triple_cWW_tSH_GUC_rpr.pdb,3.38 -Triple_cWW_cSW_UGC_rpr.pdb,3.41 -Triple_tWW_cSH_GCU_rpr.pdb,3.44 -Triple_cWW_tHS_GCU_rpr.pdb,3.46 -Triple_tWW_cHS_GCU_rpr.pdb,3.46 -Triple_cSW_cSW_UCG_rpr.pdb,3.47 -Triple_tWW_tSW_UCG_rpr.pdb,3.47 -Triple_cWW_tSW_GUC_rpr.pdb,3.48 -Triple_tSW_cSS_GUC_exemplar_rpr.pdb,3.48 -Triple_tSW_tsS_UCG_rpr.pdb,3.48 -Triple_tSW_cSS_GUC_rpr.pdb,3.48 -Triple_tHH_cSW_UCG_rpr.pdb,3.48 -Triple_cWW_tSW_CGU_exemplar_rpr.pdb,3.48 -Triple_cWW_cSS_GCU_rpr.pdb,3.51 -Triple_cWW_tSW_CGU_rpr.pdb,3.51 -Triple_tWW_tSH_GUC_rpr.pdb,3.53 -Triple_cHW_cSS_GCU_rpr.pdb,3.55 -Triple_tSW_tHW_CGU_rpr.pdb,3.56 -Triple_tWW_cHH_UGC_rpr.pdb,3.57 -Triple_tHH_cSW_GCU_rpr.pdb,3.59 -Triple_tSW_tSW_CGU_rpr.pdb,3.59 -Triple_cWW_cSS_GCU_exemplar_rpr.pdb,3.6 -Triple_cWW_tSW_UGC_rpr.pdb,3.6 -Triple_cSW_tHH_UCG_rpr.pdb,3.63 -Triple_tWW_cSS_GUC_rpr.pdb,3.66 -Triple_tHW_tSH_GUC_rpr.pdb,3.66 -Triple_tWW_tHH_GUC_rpr.pdb,3.66 -Triple_tWW_tHH_UGC_rpr.pdb,3.66 -Triple_tWW_tHS_GCU_rpr.pdb,3.66 -Triple_tSW_tSW_GUC_rpr.pdb,3.66 -Triple_tSW_cSW_GUC_rpr.pdb,3.68 -Triple_tSW_cSW_GCU_rpr.pdb,3.68 -Triple_tWW_tHH_GCU_rpr.pdb,3.69 -Triple_tSW_tSW_CUG_rpr.pdb,3.7 -Triple_tHW_cSW_GCU_rpr.pdb,3.7 -Triple_cWW_cSW_CUG_rpr.pdb,3.72 -Triple_tSW_tSH_GUC_rpr.pdb,3.73 -Triple_cSW_tHH_GCU_rpr.pdb,3.74 -Triple_cSH_cSW_UCG_rpr.pdb,3.75 -Triple_tWW_cSW_GUC_rpr.pdb,3.76 -Triple_tHW_cSH_GUC_rpr.pdb,3.76 -Triple_cWW_cSW_GCU_rpr.pdb,3.78 -Triple_tHW_tHH_UGC_rpr.pdb,3.82 -Triple_cWW_tSH_CGU_rpr.pdb,3.83 -Triple_cSW_cSS_GCU_rpr.pdb,3.84 -Triple_cSW_tHH_UGC_rpr.pdb,3.85 -Triple_tSW_tSH_CGU_rpr.pdb,3.86 -Triple_cSW_cSW_GCU_rpr.pdb,3.86 -Triple_cSW_tHW_CUG_rpr.pdb,3.87 -Triple_cSW_tSW_CGU_rpr.pdb,3.88 -Triple_tSW_cSW_CUG_rpr.pdb,3.9 -Triple_tHW_tHW_UGC_rpr.pdb,3.91 -Triple_tHW_cHW_GUC_rpr.pdb,3.91 -Triple_cWW_tSW_UCG_rpr.pdb,3.94 -Triple_tSW_tSW_UCG_rpr.pdb,3.95 -Triple_cWW_tSH_CGU_exemplar_rpr.pdb,3.96 -Triple_cWW_cSH_GCU_rpr.pdb,3.97 -Triple_tSW_cHW_UGC_rpr.pdb,3.98 -Triple_cWW_cSS_UGC_exemplar_rpr.pdb,3.98 -Triple_cSW_tSW_UCG_rpr.pdb,3.98 -Triple_tSW_tHH_UGC_rpr.pdb,3.99 -Triple_cWW_cSH_GCU_exemplar_rpr.pdb,4.0 -Triple_cSW_tSH_CGU_rpr.pdb,4.0 -Triple_tWW_tHW_UGC_rpr.pdb,4.01 -Triple_cWW_tHW_CGU_rpr.pdb,4.01 -Triple_tWW_tSW_CUG_rpr.pdb,4.02 -Triple_cSW_tHS_CUG_rpr.pdb,4.03 -Triple_cHW_tHH_UCG_rpr.pdb,4.03 -Triple_tWW_cSW_GCU_rpr.pdb,4.06 -Triple_cSW_tHS_GCU_rpr.pdb,4.07 -Triple_tHW_tHH_GCU_rpr.pdb,4.07 -Triple_cSW_tHW_UGC_rpr.pdb,4.07 -Triple_cHW_cHS_GCU_rpr.pdb,4.07 -Triple_cHW_cSS_GUC_rpr.pdb,4.08 -Triple_tHH_tSW_GCU_rpr.pdb,4.09 -Triple_tWW_tHH_UCG_rpr.pdb,4.09 -Triple_tSW_tHW_UGC_rpr.pdb,4.09 -Triple_tHW_cSS_GUC_rpr.pdb,4.1 -Triple_tHW_tHS_GCU_rpr.pdb,4.13 -Triple_cWW_tsS_UCG_rpr.pdb,4.13 -Triple_cSW_cHS_UCG_rpr.pdb,4.15 -Triple_tSW_tSW_GCU_rpr.pdb,4.15 -Triple_tSH_tSW_GUC_rpr.pdb,4.17 -Triple_tWW_cSW_CUG_rpr.pdb,4.2 -Triple_cWW_tHW_UGC_rpr.pdb,4.22 -Triple_tWW_cSS_UCG_rpr.pdb,4.22 -Triple_cSW_cSH_GCU_rpr.pdb,4.22 -Triple_cHW_cSW_GUC_rpr.pdb,4.24 -Triple_tHH_tSS_CGU_rpr.pdb,4.25 -Triple_cWW_cSW_GCU_exemplar_rpr.pdb,4.25 -Triple_cWW_tSW_CUG_rpr.pdb,4.25 -Triple_tWW_tHW_CGU_rpr.pdb,4.26 -Triple_tSW_tHH_GCU_rpr.pdb,4.27 -Triple_cSW_cSH_GUC_rpr.pdb,4.28 -Triple_cWW_tHH_UGC_rpr.pdb,4.29 -Triple_tHW_cSW_GUC_rpr.pdb,4.29 -Triple_cSW_tsS_UCG_rpr.pdb,4.31 -Triple_tWW_tsS_UCG_rpr.pdb,4.31 -Triple_tHW_cHW_UGC_rpr.pdb,4.31 -Triple_cHW_tHH_GCU_rpr.pdb,4.34 -Triple_tWW_cHW_GUC_rpr.pdb,4.34 -Triple_tSW_cSS_GCU_rpr.pdb,4.35 -Triple_cWW_tHH_UCG_rpr.pdb,4.35 -Triple_tWW_tHS_CUG_rpr.pdb,4.35 -Triple_tSH_cSH_GUC_rpr.pdb,4.35 -Triple_tSH_tSH_GUC_rpr.pdb,4.36 -Triple_tSH_tSW_UCG_rpr.pdb,4.37 -Triple_cHW_tHS_GCU_rpr.pdb,4.37 -Triple_tHH_cSS_GCU_rpr.pdb,4.42 -Triple_tHW_tSW_GCU_rpr.pdb,4.43 -Triple_tWW_cHS_GUC_rpr.pdb,4.43 -Triple_tSW_cSW_UGC_rpr.pdb,4.43 -Triple_tHW_cSS_GCU_rpr.pdb,4.44 -Triple_cSW_cSH_UGC_rpr.pdb,4.44 -Triple_tSW_tHW_CUG_rpr.pdb,4.47 -Triple_cSW_cHW_UGC_rpr.pdb,4.47 -Triple_tWH_tSW_GUC_rpr.pdb,4.47 -Triple_cSW_cSS_CUG_rpr.pdb,4.51 -Triple_tHH_cSH_GCU_rpr.pdb,4.52 -Triple_cSW_tSW_GCU_rpr.pdb,4.52 -Triple_tHH_tSW_UCG_rpr.pdb,4.53 -Triple_cWW_cHW_UGC_rpr.pdb,4.53 -Triple_cWW_tHW_CUG_rpr.pdb,4.56 -Triple_tSW_cSS_UCG_rpr.pdb,4.57 -Triple_tHW_cSW_UGC_rpr.pdb,4.57 -Triple_tSW_cHW_CGU_rpr.pdb,4.58 -Triple_tSW_cSH_GCU_rpr.pdb,4.58 -Triple_tWH_tSS_CGU_rpr.pdb,4.6 -Triple_cSW_cSS_UCG_rpr.pdb,4.62 -Triple_tWW_cSW_UGC_rpr.pdb,4.62 -Triple_tWW_cHS_UCG_rpr.pdb,4.64 -Triple_tWH_tSH_GUC_rpr.pdb,4.64 -Triple_tWW_cSS_CUG_rpr.pdb,4.64 -Triple_cWW_tsS_CUG_rpr.pdb,4.65 -Triple_tHW_cSH_GCU_rpr.pdb,4.65 -Triple_cWW_cHS_UCG_rpr.pdb,4.65 -Triple_cSW_tHW_CGU_rpr.pdb,4.67 -Triple_cWW_cSS_UCG_rpr.pdb,4.67 -Triple_cSH_cSW_GCU_rpr.pdb,4.67 -Triple_cHW_cSH_GCU_rpr.pdb,4.69 -Triple_cHW_cHS_UCG_rpr.pdb,4.69 -Triple_cWW_tSW_GCU_rpr.pdb,4.69 -Triple_cWW_tHH_GUC_rpr.pdb,4.69 -Triple_tWW_cSW_CGU_rpr.pdb,4.7 -Triple_cHW_tHH_GUC_rpr.pdb,4.71 -Triple_tHH_cSW_CUG_rpr.pdb,4.72 -Triple_cSW_cSW_CGU_rpr.pdb,4.77 -Triple_cHW_cSW_UCG_rpr.pdb,4.78 -Triple_tSW_tsS_CUG_rpr.pdb,4.79 -Triple_tSH_cSW_GUC_rpr.pdb,4.79 -Triple_tSW_cHH_UGC_rpr.pdb,4.79 -Triple_cHW_cSS_UCG_rpr.pdb,4.79 -Triple_cWW_cSS_CUG_rpr.pdb,4.8 -Triple_cSW_cSS_GUC_rpr.pdb,4.8 -Triple_cSW_cSW_GUC_rpr.pdb,4.81 -Triple_cWW_cSW_CGU_rpr.pdb,4.83 -Triple_tWW_tsS_CUG_rpr.pdb,4.85 -Triple_tWW_cHH_UCG_rpr.pdb,4.87 -Triple_tSW_cSS_CUG_rpr.pdb,4.87 -Triple_tHH_tSW_CGU_rpr.pdb,4.87 -Triple_tSH_cSS_GUC_rpr.pdb,4.88 -Triple_cWW_cHW_GUC_rpr.pdb,4.89 -Triple_cSW_tSH_GUC_rpr.pdb,4.9 -Triple_cSH_tSW_UCG_rpr.pdb,4.9 -Triple_tSW_cHW_GUC_rpr.pdb,4.91 -Triple_tHH_tSW_CUG_rpr.pdb,4.91 -Triple_tHW_tHH_GUC_rpr.pdb,4.92 -Triple_cSH_tSW_GCU_rpr.pdb,4.92 -Triple_tHW_cHH_UGC_rpr.pdb,4.94 -Triple_tSW_tHH_UCG_rpr.pdb,4.94 -Triple_cHW_tSW_UCG_rpr.pdb,4.95 -Triple_cHW_cHW_GUC_rpr.pdb,4.96 -Triple_cWW_cHW_CGU_exemplar_rpr.pdb,4.97 -Triple_tSW_cHS_GUC_rpr.pdb,4.97 -Triple_cSW_tHH_GUC_rpr.pdb,4.98 -Triple_tSW_tHH_GUC_rpr.pdb,4.99 -Triple_cWW_cHW_CGU_rpr.pdb,4.99 -Triple_cSW_cHW_GUC_rpr.pdb,5.01 -Triple_cHW_cHS_GUC_rpr.pdb,5.03 -Triple_cSW_tsS_CUG_rpr.pdb,5.04 -Triple_cHH_cSW_GCU_rpr.pdb,5.04 -Triple_tHW_tSW_UGC_rpr.pdb,5.05 -Triple_cHH_cSH_GCU_rpr.pdb,5.05 -Triple_cSW_cHH_UGC_rpr.pdb,5.05 -Triple_tWH_cSH_GUC_rpr.pdb,5.07 -Triple_tHH_tSH_CGU_rpr.pdb,5.07 -Triple_cHH_tSW_GCU_rpr.pdb,5.07 -Triple_tHW_cHS_GUC_rpr.pdb,5.07 -Triple_cWW_cHS_GUC_rpr.pdb,5.07 -Triple_tWW_cHS_CUG_rpr.pdb,5.09 -Triple_cSW_cSW_CUG_rpr.pdb,5.09 -Triple_cHW_cSW_GCU_rpr.pdb,5.15 -Triple_tWH_cSW_GUC_rpr.pdb,5.19 -Triple_cHH_cSS_GCU_rpr.pdb,5.2 -Triple_tSH_cSS_UCG_rpr.pdb,5.2 -Triple_cSW_cSH_CGU_rpr.pdb,5.21 -Triple_tWW_cHW_CGU_rpr.pdb,5.21 -Triple_cWW_tHS_CUG_rpr.pdb,5.23 -Triple_cSW_cHS_GUC_rpr.pdb,5.23 -Triple_cHW_cHH_UCG_rpr.pdb,5.24 -Triple_cHW_tSH_GUC_rpr.pdb,5.24 -Triple_cWW_cHH_UGC_rpr.pdb,5.25 -Triple_tSW_tSW_UGC_rpr.pdb,5.26 -Triple_tWH_tSW_CGU_rpr.pdb,5.29 -Triple_cWW_cHH_UGC_exemplar_rpr.pdb,5.29 -Triple_cSW_cSS_CGU_rpr.pdb,5.3 -Triple_tSW_cHS_CUG_rpr.pdb,5.32 -Triple_cSW_tSW_GUC_rpr.pdb,5.33 -Triple_tHH_cSS_UCG_rpr.pdb,5.34 -Triple_cSH_cSS_UCG_rpr.pdb,5.36 -Triple_cWH_tSS_CGU_rpr.pdb,5.36 -Triple_tWH_cSS_GUC_rpr.pdb,5.36 -Triple_tWW_cSH_CGU_rpr.pdb,5.37 -Triple_tSW_cSW_CGU_rpr.pdb,5.39 -Triple_cHW_tsS_UCG_rpr.pdb,5.39 -Triple_cWH_cSW_CUG_rpr.pdb,5.41 -Triple_cSH_tSW_CUG_rpr.pdb,5.42 -Triple_tSW_tHS_GCU_rpr.pdb,5.43 -Triple_cWW_cSH_CGU_exemplar_rpr.pdb,5.44 -Triple_cWW_cSH_CGU_rpr.pdb,5.45 -Triple_tWH_tSH_CGU_rpr.pdb,5.45 -Triple_cWH_tSW_CUG_rpr.pdb,5.48 -Triple_tSW_cHS_UCG_rpr.pdb,5.5 -Triple_cWW_cHH_UCG_rpr.pdb,5.5 -Triple_cSW_cHW_CGU_rpr.pdb,5.52 -Triple_cSH_cSW_CUG_rpr.pdb,5.53 -Triple_cSW_cHH_UCG_rpr.pdb,5.53 -Triple_tWW_tSW_GCU_rpr.pdb,5.54 -Triple_cWW_cSS_CGU_exemplar_rpr.pdb,5.61 -Triple_cHH_cSS_CGU_rpr.pdb,5.62 -Triple_cWW_cHS_CUG_rpr.pdb,5.62 -Triple_tWW_cSS_CGU_rpr.pdb,5.63 -Triple_cWW_cSS_CGU_rpr.pdb,5.66 -Triple_cSW_cHS_CUG_rpr.pdb,5.66 -Triple_cWW_cSS_UGC_rpr.pdb,5.7 -Triple_cSW_tSW_CUG_rpr.pdb,5.7 -Triple_tHH_cSW_CGU_rpr.pdb,5.74 -Triple_tWH_tSS_UGC_rpr.pdb,5.77 -Triple_cSH_cSH_GCU_rpr.pdb,5.78 -Triple_cHH_tSS_CGU_rpr.pdb,5.8 -Triple_cWW_cSW_CGU_exemplar_rpr.pdb,5.83 -Triple_tHW_cSH_UGC_rpr.pdb,5.86 -Triple_cSH_tSH_GUC_rpr.pdb,5.87 -Triple_tWW_cSH_UGC_rpr.pdb,5.87 -Triple_cSH_cSS_GCU_rpr.pdb,5.88 -Triple_cHW_tSW_GCU_rpr.pdb,5.9 -Triple_tHH_cSS_CUG_rpr.pdb,5.95 -Triple_cHW_tSW_GUC_rpr.pdb,5.97 -Triple_cSW_cSS_UGC_rpr.pdb,6.02 -Triple_tSW_cSH_CGU_rpr.pdb,6.03 -Triple_cSH_cSS_GUC_rpr.pdb,6.08 -Triple_cSH_cSS_CUG_rpr.pdb,6.13 -Triple_cWH_tSW_CGU_rpr.pdb,6.13 -Triple_tSW_cHH_UCG_rpr.pdb,6.15 -Triple_cSH_cSW_GUC_rpr.pdb,6.19 -Triple_cSH_tSW_GUC_rpr.pdb,6.24 -Triple_cWH_tSH_CGU_rpr.pdb,6.29 -Triple_cHH_cSW_CGU_rpr.pdb,6.29 -Triple_cSH_cSH_GUC_rpr.pdb,6.3 -Triple_cWH_cSS_CUG_rpr.pdb,6.32 -Triple_tSW_cSS_CGU_rpr.pdb,6.32 -Triple_tWH_cSW_CGU_rpr.pdb,6.36 -Triple_cHH_tSW_CGU_rpr.pdb,6.41 -Triple_cWH_cSS_UGC_rpr.pdb,6.52 -Triple_cHH_tSH_CGU_rpr.pdb,6.54 -Triple_cWH_cSW_CGU_rpr.pdb,6.64 -Triple_tHH_cSH_CGU_rpr.pdb,6.71 -Triple_cWH_tSW_UGC_rpr.pdb,6.82 -Triple_tHW_cSS_UGC_rpr.pdb,6.89 -Triple_cWH_cSW_UGC_rpr.pdb,6.93 -Triple_tWH_cSW_UGC_rpr.pdb,6.94 -Triple_tHH_cSS_CGU_rpr.pdb,7.01 -Triple_tSW_cSS_UGC_rpr.pdb,7.02 -Triple_cHH_cSH_CGU_rpr.pdb,7.04 -Triple_cWH_cSS_CGU_rpr.pdb,7.11 -Triple_tWH_cSH_CGU_rpr.pdb,7.13 -Triple_tWH_cSH_UGC_rpr.pdb,7.15 -Triple_tWW_cSS_UGC_rpr.pdb,7.17 -Triple_cWH_cSH_CGU_rpr.pdb,7.22 -Triple_tWH_cSS_UGC_rpr.pdb,7.29 -Triple_tWH_cSS_CGU_rpr.pdb,7.39 diff --git a/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv b/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv deleted file mode 100644 index 9c6f99835..000000000 --- a/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv +++ /dev/null @@ -1,60 +0,0 @@ -fn,rmsd -Triple_cWW_cHS_GCU_exemplar_rpr.pdb,0.0 -Triple_cWW_cHS_GCU_rpr.pdb,1.72 -Triple_tWW_cSS_GCU_rpr.pdb,2.62 -Triple_tHW_cHS_GCU_rpr.pdb,2.66 -Triple_cWW_tHH_GCU_rpr.pdb,3.01 -Triple_cWW_tHH_GCU_exemplar_rpr.pdb,3.03 -Triple_cSW_cHS_GCU_rpr.pdb,3.17 -Triple_tSW_cHS_GCU_rpr.pdb,3.34 -Triple_tWW_cSH_GCU_rpr.pdb,3.44 -Triple_tWW_cHS_GCU_rpr.pdb,3.46 -Triple_cWW_tHS_GCU_rpr.pdb,3.46 -Triple_cWW_cSS_GCU_rpr.pdb,3.51 -Triple_cHW_cSS_GCU_rpr.pdb,3.55 -Triple_tHH_cSW_GCU_rpr.pdb,3.59 -Triple_cWW_cSS_GCU_exemplar_rpr.pdb,3.6 -Triple_tWW_tHS_GCU_rpr.pdb,3.66 -Triple_tSW_cSW_GCU_rpr.pdb,3.68 -Triple_tWW_tHH_GCU_rpr.pdb,3.69 -Triple_tHW_cSW_GCU_rpr.pdb,3.7 -Triple_cSW_tHH_GCU_rpr.pdb,3.74 -Triple_cWW_cSW_GCU_rpr.pdb,3.78 -Triple_cSW_cSS_GCU_rpr.pdb,3.84 -Triple_cSW_cSW_GCU_rpr.pdb,3.86 -Triple_cWW_cSH_GCU_rpr.pdb,3.97 -Triple_cWW_cSH_GCU_exemplar_rpr.pdb,4.0 -Triple_tWW_cSW_GCU_rpr.pdb,4.06 -Triple_cSW_tHS_GCU_rpr.pdb,4.07 -Triple_tHW_tHH_GCU_rpr.pdb,4.07 -Triple_cHW_cHS_GCU_rpr.pdb,4.07 -Triple_tHH_tSW_GCU_rpr.pdb,4.09 -Triple_tHW_tHS_GCU_rpr.pdb,4.13 -Triple_tSW_tSW_GCU_rpr.pdb,4.15 -Triple_cSW_cSH_GCU_rpr.pdb,4.22 -Triple_cWW_cSW_GCU_exemplar_rpr.pdb,4.25 -Triple_tSW_tHH_GCU_rpr.pdb,4.27 -Triple_cHW_tHH_GCU_rpr.pdb,4.34 -Triple_tSW_cSS_GCU_rpr.pdb,4.35 -Triple_cHW_tHS_GCU_rpr.pdb,4.37 -Triple_tHH_cSS_GCU_rpr.pdb,4.42 -Triple_tHW_tSW_GCU_rpr.pdb,4.43 -Triple_tHW_cSS_GCU_rpr.pdb,4.44 -Triple_cSW_tSW_GCU_rpr.pdb,4.52 -Triple_tHH_cSH_GCU_rpr.pdb,4.52 -Triple_tSW_cSH_GCU_rpr.pdb,4.58 -Triple_tHW_cSH_GCU_rpr.pdb,4.65 -Triple_cSH_cSW_GCU_rpr.pdb,4.67 -Triple_cHW_cSH_GCU_rpr.pdb,4.69 -Triple_cWW_tSW_GCU_rpr.pdb,4.69 -Triple_cSH_tSW_GCU_rpr.pdb,4.92 -Triple_cHH_cSW_GCU_rpr.pdb,5.04 -Triple_cHH_cSH_GCU_rpr.pdb,5.05 -Triple_cHH_tSW_GCU_rpr.pdb,5.07 -Triple_cHW_cSW_GCU_rpr.pdb,5.15 -Triple_cHH_cSS_GCU_rpr.pdb,5.2 -Triple_tSW_tHS_GCU_rpr.pdb,5.43 -Triple_tWW_tSW_GCU_rpr.pdb,5.54 -Triple_cSH_cSH_GCU_rpr.pdb,5.78 -Triple_cSH_cSS_GCU_rpr.pdb,5.88 -Triple_cHW_tSW_GCU_rpr.pdb,5.9 diff --git a/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb b/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb deleted file mode 100755 index 3d094b410..000000000 --- a/rna_tools/tools/triplexibility/data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb +++ /dev/null @@ -1,67 +0,0 @@ -REMARK 250 Model edited with rna-tools -REMARK 250 ver 3.5.4+63.g4338516.dirty -REMARK 250 https://github.com/mmagnus/rna-tools -REMARK 250 Fri Nov 13 10:14:42 2020 -ATOM 1 P G A 1 10.513 9.018 -0.170 1.00 99.99 P -ATOM 2 OP1 G A 1 11.104 10.163 -0.891 1.00 99.99 O -ATOM 3 OP2 G A 1 9.049 8.797 -0.280 1.00 99.99 O -ATOM 4 O5' G A 1 11.259 7.671 -0.605 1.00 99.99 O -ATOM 5 C5' G A 1 10.606 6.721 -1.428 1.00 99.99 C -ATOM 6 C4' G A 1 10.524 5.395 -0.704 1.00 99.99 C -ATOM 7 O4' G A 1 9.856 5.526 0.579 1.00 99.99 O -ATOM 8 C3' G A 1 9.695 4.346 -1.417 1.00 99.99 C -ATOM 9 O3' G A 1 10.423 3.767 -2.482 1.00 99.99 O -ATOM 10 C2' G A 1 9.384 3.379 -0.283 1.00 99.99 C -ATOM 11 O2' G A 1 10.481 2.582 0.096 1.00 99.99 O -ATOM 12 C1' G A 1 9.015 4.403 0.789 1.00 99.99 C -ATOM 13 N9 G A 1 7.627 4.827 0.613 1.00 99.99 N -ATOM 14 C8 G A 1 7.206 6.133 0.513 1.00 99.99 C -ATOM 15 N7 G A 1 5.899 6.241 0.345 1.00 99.99 N -ATOM 16 C5 G A 1 5.459 4.937 0.336 1.00 99.99 C -ATOM 17 C6 G A 1 4.122 4.414 0.186 1.00 99.99 C -ATOM 18 O6 G A 1 3.055 4.975 0.032 1.00 99.99 O -ATOM 19 N1 G A 1 4.174 2.983 0.243 1.00 99.99 N -ATOM 20 C2 G A 1 5.290 2.200 0.412 1.00 99.99 C -ATOM 21 N2 G A 1 5.094 0.851 0.435 1.00 99.99 N -ATOM 22 N3 G A 1 6.503 2.676 0.548 1.00 99.99 N -ATOM 23 C4 G A 1 6.514 4.037 0.501 1.00 99.99 C -ATOM 24 P C A 2 -5.198 -0.567 1.246 1.00 99.99 P -ATOM 25 OP1 C A 2 -5.934 -1.524 2.104 1.00 99.99 O -ATOM 26 OP2 C A 2 -5.112 0.852 1.664 1.00 99.99 O -ATOM 27 O5' C A 2 -3.716 -1.113 0.982 1.00 99.99 O -ATOM 28 C5' C A 2 -3.460 -2.490 0.678 1.00 99.99 C -ATOM 29 C4' C A 2 -1.964 -2.758 0.677 1.00 99.99 C -ATOM 30 O4' C A 2 -1.343 -2.025 -0.411 1.00 99.99 O -ATOM 31 C3' C A 2 -1.210 -2.234 1.893 1.00 99.99 C -ATOM 32 O3' C A 2 -1.305 -3.087 3.014 1.00 99.99 O -ATOM 33 C2' C A 2 0.213 -2.147 1.365 1.00 99.99 C -ATOM 34 O2' C A 2 0.847 -3.402 1.228 1.00 99.99 O -ATOM 35 C1' C A 2 -0.067 -1.547 -0.005 1.00 99.99 C -ATOM 36 N1 C A 2 0.000 0.000 0.000 1.00 99.99 N -ATOM 37 C2 C A 2 1.289 0.599 -0.000 1.00 99.99 C -ATOM 38 O2 C A 2 2.269 -0.121 -0.000 1.00 99.99 O -ATOM 39 N3 C A 2 1.312 1.978 0.000 1.00 99.99 N -ATOM 40 C4 C A 2 0.183 2.655 -0.000 1.00 99.99 C -ATOM 41 N4 C A 2 0.281 4.009 0.000 1.00 99.99 N -ATOM 42 C5 C A 2 -1.129 2.058 0.000 1.00 99.99 C -ATOM 43 C6 C A 2 -1.162 0.698 0.000 1.00 99.99 C -ATOM 44 P U A 3 -6.627 10.525 -2.868 1.00 99.99 P -ATOM 45 OP1 U A 3 -7.999 10.913 -2.479 1.00 99.99 O -ATOM 46 OP2 U A 3 -5.480 11.240 -2.252 1.00 99.99 O -ATOM 47 O5' U A 3 -6.440 8.957 -2.618 1.00 99.99 O -ATOM 48 C5' U A 3 -6.556 8.454 -1.309 1.00 99.99 C -ATOM 49 C4' U A 3 -6.036 7.031 -1.254 1.00 99.99 C -ATOM 50 O4' U A 3 -4.593 6.998 -1.326 1.00 99.99 O -ATOM 51 C3' U A 3 -6.341 6.275 0.026 1.00 99.99 C -ATOM 52 O3' U A 3 -6.250 4.894 -0.254 1.00 99.99 O -ATOM 53 C2' U A 3 -5.217 6.725 0.941 1.00 99.99 C -ATOM 54 O2' U A 3 -4.960 5.803 1.972 1.00 99.99 O -ATOM 55 C1' U A 3 -4.056 6.730 -0.043 1.00 99.99 C -ATOM 56 N1 U A 3 -3.052 7.782 0.232 1.00 99.99 N -ATOM 57 C2 U A 3 -1.734 7.366 0.389 1.00 99.99 C -ATOM 58 O2 U A 3 -1.390 6.205 0.317 1.00 99.99 O -ATOM 59 N3 U A 3 -0.872 8.424 0.635 1.00 99.99 N -ATOM 60 C4 U A 3 -1.163 9.799 0.738 1.00 99.99 C -ATOM 61 O4 U A 3 -0.281 10.607 0.961 1.00 99.99 O -ATOM 62 C5 U A 3 -2.581 10.097 0.554 1.00 99.99 C -ATOM 63 C6 U A 3 -3.456 9.094 0.312 1.00 99.99 C diff --git a/rna_tools/tools/triplexibility/db/gendb.py b/rna_tools/tools/triplexibility/db/gendb.py deleted file mode 100755 index 5b4ff3b4b..000000000 --- a/rna_tools/tools/triplexibility/db/gendb.py +++ /dev/null @@ -1,11 +0,0 @@ -import os -for s in ['t1-3_cWW_tHW_UAA_exemplar_rpr', 't2-3-UAU', 't2-4-ACA', 't3-3_AUA']: - for mode in ['sugar', 'backbone+sugar', 'c1', 'c1+Nx']: - for f in ['Triple_cWW_*_rpr.pdb', - 'Triple_*_rpr.pdb', - 'Triple_*ex*_rpr.pdb', - 'Triple_cWW_*ex*_rpr.pdb', - ]: #'Triple_*_rpr.pdb']: - cmd = 'triplexibility.py triples-all-v2-rpr/%s -t %s.pdb --way %s --save --result %s_%s_%s_rmsd.csv --sort --folder-prefix %s_%s --triple-mode' % (f,s,mode,s, f.replace('*','X'),mode, f.replace('*','X'),mode) - print(cmd) - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/download-all-pdbs.py b/rna_tools/tools/triplexibility/download-all-pdbs.py deleted file mode 100644 index 87e7709a4..000000000 --- a/rna_tools/tools/triplexibility/download-all-pdbs.py +++ /dev/null @@ -1,57 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function -import os -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - return parser - - -if __name__ == '__main__': - txt = """cSW_cSH_CAA -cSW_cSH_CAG -cSW_tHW_CAA -cSW_tHW_CAC -cSW_tSW_UGC -cSW_tSS_CAA -cSW_tSS_CAG -cWH_cSH_UGC -cWW_cSH_UGC -cWW_tHS_CAA -cWW_tHS_CAC -cWW_tSW_CAC -tHH_cSH_CAC -tHH_tSS_CAC -tHH_tSS_GCA -tSH_tSW_CAC -tSW_cSH_UGC -tSW_tHS_CAA -tSW_tHS_CAC -tSW_tHS_CUG -tWH_cSH_CAA -tWH_cSH_CAG -tWH_tSW_UGC -tWW_cSH_CAC -tWW_tHW_CAA -tWW_tHW_CAC -tWW_tHW_CUG -tWW_tSW_UGC -tWW_tSS_CAA -tWW_tSS_CAG -""" - txt = """ -tHH_tSS_GCA -""" - for t in txt.split('\n'): - print(t) - os.system('wget http://rna.bgsu.edu/triples/Data/v1.4/Models/Triple_' + t + '.pdb') - - diff --git a/rna_tools/tools/triplexibility/download-all-triples.py b/rna_tools/tools/triplexibility/download-all-triples.py deleted file mode 100755 index adcc19cab..000000000 --- a/rna_tools/tools/triplexibility/download-all-triples.py +++ /dev/null @@ -1,29 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function -import os -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - xx = "cHW tHW cHH tHH cHS tHS cSW tSW cSH tSH cSS tSS tsS".split() - yy = "cWW tWW cHW tHW cSW tSW cWH tWH cHH tHH cSH tSH".split() - c = 1 - for x in xx: - for y in yy: - cmd = 'wget http://rna.bgsu.edu/triples/script/triple_' + y + '_' + x + '.html' - print(cmd) - print(c) - c += 1 - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/download-all.py b/rna_tools/tools/triplexibility/download-all.py deleted file mode 100644 index a59ff7b3d..000000000 --- a/rna_tools/tools/triplexibility/download-all.py +++ /dev/null @@ -1,41 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function -import os -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - return parser - - -if __name__ == '__main__': - txt = """AA AAA AAC AAG AAU -AC ACA ACC ACG ACU -AG AGA AGC AGG AGU -AU AUA AUC AUG AUU -CA CAA CAC CAG CAU -CC CCA CCC CCG CCU -CG CGA CGC CGG CGU -CU CUA CUC CUG CUU -GA GAA GAC GAG GAU -GC GCA GCC GCG GCU -GG GGA GGC GGG GGU -GU GUA GUC GUG GUU -UA UAA UAC UAG UAU -UC UCA UCC UCG UCU -UG UGA UGC UGG UGU -UU UUA UUC UUG UUU -""" - for l in txt.split('\n'): - l = l.strip() - triples = l.split() - for t in triples[1:]: - print(t) - os.system('wget http://rna.bgsu.edu/triples/seq/' + t + '.html') diff --git a/rna_tools/tools/triplexibility/lib.py b/rna_tools/tools/triplexibility/lib.py deleted file mode 100644 index 3702cc098..000000000 --- a/rna_tools/tools/triplexibility/lib.py +++ /dev/null @@ -1,205 +0,0 @@ -import sys -from icecream import ic - -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -import pandas as pd -df = pd.read_csv('triple-db.csv') -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - #parser.add_argument('-', "--", help="", default="") - - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - #parser.add_argument("seq", help="U57:A27.A53 / wt UAA", default="UAA") # nargs='+') - #parser.add_argument("--d2", help="U6-A59:U2-U23 / wt AU", default="UA") # nargs='+') - #parser.add_argument("--growth", help="experimental results", default=0) # nargs='+') - return parser - -def score_trx_double(seq, tindex): - rmsd, triple, rmsd2, triple2 = get_trx(seq, tindex) # t1_3, 't1_3') - - cs = get_clashscore(triple) - inst = get_instances(triple) - - cs2 = get_clashscore(triple2) - inst2 = get_instances(triple2) - - print('>> triplex 1 triple 3: \n %s with rmsd score of %.2f of clashscore %i and instances %i' % (triple, rmsd, cs, inst)) - print(' \n %s with rmsd score of %.2f of clashscore %i and instances %i' % (triple2, rmsd2, cs2, inst2)) - return (triple, rmsd, cs, inst) - -def score_trx(seq, triple_id): - """ - seq: 'UUA' - triple_id: 't1_3' - """ - return get_trx(seq, triple_id) - rmsd, triple, l = get_trx(seq, triple_id) - ic(triple) - cs = get_clashscore(triple) - inst = get_instances(triple) - - print(triple_id + ': %s with rmsd score of %.2f of clashscore %i and instances %i' % (triple, rmsd, cs, inst)) - return (triple, rmsd, cs, inst) - -def duplex_energy(s): - """ - cGAUCgaaaGAUCg - (((((....))))) - rna_secondary_structure_prediction.py --method mcfold --file wt.fa - """ - s = 'cG' + s[1] + 'GCgaaaGC' + s[0] + 'Cg' - ss = '(((((....)))))' - from rna_tools.Seq import RNASequence - seq = RNASequence(s) - en, ss, comment = seq.predict_ss('mcfold', constraints=ss) - print(' ', s, en, ss) - return en -""" - if s == 'AU': - return -15.81 - if s == 'AA': - return -13.42 - if s == 'UA': - return -15.81 - if s == 'CA': - return -13.0 - if s == 'GA': - return -13.73 - return -1 # write them down -""" -def duplex2_energy(s): - s = 'c' + s[1] + 'GCgaaaGC' + s[0] + 'c' - ss = '((((....))))' - from rna_tools.Seq import RNASequence - seq = RNASequence(s) - en, ss, comment = seq.predict_ss('mcfold', constraints=ss) - # print(' ', s, en, ss) - return en - -def get_trx_double(seq, triple): - # ic('>>', seq, triple) - if triple == 't1_3': - f = 'db/t1-3_cWW_tHW_UAA_exemplar_rpr_rmsd.csv' - elif triple == 't2_3': - f = 'db/t2-3-UAU_rmsd.csv' - elif triple == 't2_4': - f = 'db/t2-4-ACA_rmsd.csv' - elif triple == 't3_3': - f = 'db/t3-3_AUA_rmsd.csv' - - rmsd1, line1 = -1, -1 - rmsd2, line2 = -1, -1 - - for l in open(f): - if seq.lower() in l.lower(): - triple, rmsd = l.split(',') # Triple_cWW_tHS_AUG_exemplar_rpr.pdb,3.804 - if rmsd1 == -1: - rmsd1 = round(float(rmsd), 2) - line1 = triple - else: - rmsd2 = round(float(rmsd), 2) - line2 = triple - break - #if r > 2: # 1.75: - # print(' ' + l.strip()) - return rmsd1, line1, rmsd2, line2 - -def get_trx(seq, triple_id): - """ - - db/t1-3_cWW_tHW_UAA_exemplar_rpr_Triple_cWW_*_rpr.pdb_sugar_rmsd.csv' - t1-3_cWW_tHW_UAA_exemplar_rpr_Triple_*ex*_rpr.pdb_sugar_rmsd.csv - """ - - rmsds = [] - lines = [] - scores = [] - headers = [] - - c = 0 - for s in ['t1-3_cWW_tHW_UAA_exemplar_rpr', 't2-3-UAU', 't2-4-ACA', 't3-3_AUA']: - for mode in ['backbone+sugar']: # , 'c1', 'c1+Nx']: ['sugar', - for f in [#'Triple_cWW_*_rpr.pdb', - 'Triple_*_rpr.pdb', - #'Triple_*ex*_rpr.pdb', - #'Triple_cWW_*ex*_rpr.pdb', - ]: #'Triple_*_rpr.pdb']: - fdb = "db/%s_%s_%s_rmsd.csv" % (s, f.replace('*','X') ,mode) - rmsd = -1 - if triple_id.replace('_', '-') in fdb: - for l in open(fdb): - if seq.lower() in l.lower() and rmsd == -1: # if -1 then there is no rmsd - # for this triple - triple, rmsd = l.split(',') # Triple_cWW_tHS_AUG_exemplar_rpr.pdb,3.804 - cs = get_clashscore(triple) - if cs != 0: - rmsd = -1 # reset the flag - continue # cs not zero, so go ahead - else: - ins = get_instances(triple) - rmsd = round(float(rmsd), 2) - headers.extend(['%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_rmsd', - '%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_cs', - '%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_ins']) - scores.extend([rmsd, cs, ins]) - - if rmsd == -1: # still at the end of the loop - headers.extend(['%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_rmsd', - '%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_cs', - '%s_%s_%s' % (s, f.replace('*','X') ,mode) + '_ins']) - scores.extend([-1, -1, -1]) - - return scores, headers - -def get_trx_(seq, triple): - # ic('>>', seq, triple) - if triple == 't1_3': - f = 'db/t1-3_cWW_tHW_UAA_exemplar_rpr_rmsd.csv' - elif triple == 't2_3': - f = 'db/t2-3-UAU_rmsd.csv' - elif triple == 't2_4': - f = 'db/t2-4-ACA_rmsd.csv' - elif triple == 't3_3': - f = 'db/t3-3_AUA_rmsd.csv' - - rmsd1, line1 = -1, -1 - rmsd2, line2 = -1, -1 - - for l in open(f): - if seq.lower() in l.lower(): - triple, rmsd = l.split(',') # Triple_cWW_tHS_AUG_exemplar_rpr.pdb,3.804 - rmsd = round(float(rmsd), 2) - cs = get_clashscore(triple) - ic(triple, rmsd, cs) - if cs != 0: - continue # cs not zero, so go ahead - else: - break # stop this cycle and leave ;-) - return rmsd, triple, l - -def get_clashscore(t): - """ - Triple_cWW_tHW_UAA_exemplar_rpr.pdb - """ - t = t.replace('Triple_', '').replace('_rpr.pdb', '').replace('_exemplar', '') - t = t.replace('tsS','tSS') - x = df[df['triple'] == t] - return int(x['clashes']) - -def get_instances(t): - """ - Triple_cWW_tHW_UAA_exemplar_rpr.pdb - """ - t = t.replace('Triple_', '').replace('_rpr.pdb', '').replace('_exemplar', '') - t = t.replace('tsS','tSS') - x = df[df['triple'] == t] - return int(x['instances']) - - diff --git a/rna_tools/tools/triplexibility/process_triple.py b/rna_tools/tools/triplexibility/process_triple.py deleted file mode 100755 index 5b5c4d1c6..000000000 --- a/rna_tools/tools/triplexibility/process_triple.py +++ /dev/null @@ -1,100 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" -0 = gray -1 = cHW AC does not exist -2 = yellow -3 = green, exists - -http://rna.bgsu.edu/triples/seq/CAC.html - -for i in bucket/families/*; do python process_triple.py $i >> triple-db.csv ; done - -""" -from __future__ import print_function -import argparse -import re - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("file") - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() # ['familes/triple_cWW_cHW.html']) - v = args.verbose - - cols = """A C G U""".split() - family = args.file.split('/')[-1].replace('.html', '').replace('triple_', '') # pages/AAA.html - # collect all triples - index = 0 - seqs = [] - """ - 32 cWW_cHW_GAA to make a list that you can pick a triple seq - like in seqs[0] to get the first one - 0 cWW_cHW_AAA - 1 cWW_cHW_AAC - 2 cWW_cHW_AAG - 3 cWW_cHW_AAU - 4 cWW_cHW_ACA - 5 cWW_cHW_ACC - """ - for l in open(args.file): - l = l.strip() - if "", '').replace("", '') - if l: - triple = family + '_' + l + c #, end=' ') - if v: print(index, triple) - seqs.append(triple) - index += 1 - - tds = open(args.file).read().split('", '').replace('', '') - - r = re.findall('(\d+) instance', td) - instance = 0 - if r: - if v: print(r[0]) - instance = int(r[0]) - - clashes = 0 - r = re.findall('(\d+) clash', td) - if r: - if v: print(int(r[0])) - clashes = int(r[0]) - - near = 0 - r = re.findall("instances'>(\d+) near", td) - if r: - if v: print(int(r[0])) - near = int(r[0]) - - exists = 1 - if 'does not exist' in td: - title = seqs[index] - exists = 0 - - r = re.findall("title='(.+)'>", td) - title = '' - if r: - title = r[0].replace(' ', '_') - if v: print(title) - - data.append([seqs[index], title, instance, clashes, near, exists]) - ntds.append(td) - - index += 1 - - for f in data: - print(','.join([str(x) for x in f])) diff --git a/rna_tools/tools/triplexibility/readme.md b/rna_tools/tools/triplexibility/readme.md deleted file mode 100644 index 954f69534..000000000 --- a/rna_tools/tools/triplexibility/readme.md +++ /dev/null @@ -1,11 +0,0 @@ -# trx.py - - python trx.py --edge cWW_cHS gcc - GCC - Empty DataFrame - Columns: [seq, growthA25, growthA27, cWW_cHW_seq, cWW_cHW_instances, cWW_cHW_clashes, cWW_cHW_near, cWW_cHW_exists, cWW_cHW_contacts_bo, cWW_cHW_contacts_no_bk, cWW_cHW_contacts_rpr, cWW_cHW_clashscore_rpr, cWW_cHW_clashscore_no_bk, cWW_cHW_clashscore_bo, tWW_cHW_seq, tWW_cHW_instances, tWW_cHW_clashes, tWW_cHW_near, tWW_cHW_exists, tWW_cHW_contacts_bo, tWW_cHW_contacts_no_bk, tWW_cHW_contacts_rpr, tWW_cHW_clashscore_rpr, tWW_cHW_clashscore_no_bk, tWW_cHW_clashscore_bo, cHW_cHW_seq, cHW_cHW_instances, cHW_cHW_clashes, cHW_cHW_near, cHW_cHW_exists, cHW_cHW_contacts_bo, cHW_cHW_contacts_no_bk, cHW_cHW_contacts_rpr, cHW_cHW_clashscore_rpr, cHW_cHW_clashscore_no_bk, cHW_cHW_clashscore_bo, tHW_cHW_seq, tHW_cHW_instances, tHW_cHW_clashes, tHW_cHW_near, tHW_cHW_exists, tHW_cHW_contacts_bo, tHW_cHW_contacts_no_bk, tHW_cHW_contacts_rpr, tHW_cHW_clashscore_rpr, tHW_cHW_clashscore_no_bk, tHW_cHW_clashscore_bo, cSW_cHW_seq, cSW_cHW_instances, cSW_cHW_clashes, cSW_cHW_near, cSW_cHW_exists, cSW_cHW_contacts_bo, cSW_cHW_contacts_no_bk, cSW_cHW_contacts_rpr, cSW_cHW_clashscore_rpr, cSW_cHW_clashscore_no_bk, cSW_cHW_clashscore_bo, tSW_cHW_seq, tSW_cHW_instances, tSW_cHW_clashes, tSW_cHW_near, tSW_cHW_exists, tSW_cHW_contacts_bo, tSW_cHW_contacts_no_bk, tSW_cHW_contacts_rpr, tSW_cHW_clashscore_rpr, tSW_cHW_clashscore_no_bk, tSW_cHW_clashscore_bo, cWW_tHW_seq, cWW_tHW_instances, cWW_tHW_clashes, cWW_tHW_near, cWW_tHW_exists, cWW_tHW_contacts_bo, cWW_tHW_contacts_no_bk, cWW_tHW_contacts_rpr, cWW_tHW_clashscore_rpr, cWW_tHW_clashscore_no_bk, cWW_tHW_clashscore_bo, tWW_tHW_seq, tWW_tHW_instances, tWW_tHW_clashes, tWW_tHW_near, tWW_tHW_exists, tWW_tHW_contacts_bo, tWW_tHW_contacts_no_bk, tWW_tHW_contacts_rpr, tWW_tHW_clashscore_rpr, tWW_tHW_clashscore_no_bk, tWW_tHW_clashscore_bo, cHW_tHW_seq, cHW_tHW_instances, cHW_tHW_clashes, cHW_tHW_near, cHW_tHW_exists, cHW_tHW_contacts_bo, cHW_tHW_contacts_no_bk, cHW_tHW_contacts_rpr, cHW_tHW_clashscore_rpr, ...] - Index: [] - - [0 rows x 1000 columns] - > trx.py:211 in - type(x): - UAU diff --git a/rna_tools/tools/triplexibility/readme.txt b/rna_tools/tools/triplexibility/readme.txt deleted file mode 100644 index 46a67395d..000000000 --- a/rna_tools/tools/triplexibility/readme.txt +++ /dev/null @@ -1,3 +0,0 @@ -Warning: - -cWW_tsS_UUA,1#? means that the value or tsS was not visible at the page. For example: http://rna.bgsu.edu/triples/seq/AGA.html diff --git a/rna_tools/tools/triplexibility/splix.py b/rna_tools/tools/triplexibility/splix.py deleted file mode 100755 index 5812f6039..000000000 --- a/rna_tools/tools/triplexibility/splix.py +++ /dev/null @@ -1,134 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function -""" -def here which triple to chagne -""" - -from lib import * - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - from icecream import ic - import sys - ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) - ic.configureOutput(prefix='> ') - - sc = 0 - - d2 = "UA" - - rows = [] - - # encode seq - - - #for t in ['t1_3', 't2_3', 't2_4', 't3_3']: - # headers.append(t + '_triple') - # headers.append(t + '_rmsd') - # headers.append(t + '_clashscore') - # headers.append(t + '_instances') - #headers.append('growth') - - for (s, growth) in [('UAA', 1), ('UGA', 0), ('UUA', 0), ('UCA', 0.75), - ('UAC', 1), ('UGC', 0), ('UUC', 0), ('UCC', 1), - - ('AAC', 1), ('AGC', 1), ('AUC', 1), ('ACC', 1), - ('CAC', 1), ('CGC', 1), ('CUC', 0), ('CCC', 0.25), - - ('UAG', 1), ('UGG', 0), ('UUG', 0), ('UCG', 0), - ('AAG', 0), ('AGG', 0), ('AUG', 0), ('ACG', 0.5), - - ('CAG', 0), ('CGG', 0.75), ('CUG', 0), ('CCG', 0), - ('GAG', 0), ('GGG', 0.5), ('GUG', 0), ('GCG', 0.2), - - ('UAU', 1), ('UGU', 0), ('UUU', 0), ('UCU', 0), - ('AAU', 1), ('AGU', 0.75), ('AUU', 0.25), ('ACU', 0.25), - - ('CAU', 0), ('CGU', 0), ('CUU', 0), ('CCU', 0), - ('GAU', 0.25), ('GGU', 0.25), ('GUU', 0), ('GCU', 0), - - ('AAA', 1), ('AGA', 1), ('AUA', 1), ('ACA', 1), - ('CAA', 1), ('CGA', 1), ('CUA', 1), ('CCA', 0.5), - ('GAA', 1), ('GGA', 1), ('GUA', 1), ('GCA', 1)]: - print(s + ': ===========================================') - d = s[1] + s[0] # duplex a27:u57 - - row = [s[0], s[1], s[2]] - headers = ['U57', 'A27', 'A53', 'd1_energy', 'd2_energy'] # 'seq', #['A', 'C', 'U', 'G', - - if True: - energy = duplex_energy(d) - print(' calc energy of U2-A27:U6-U57 [AU] duplex now:', s[1] + s[0], energy) - row.append(energy) - #sc += 15.81 + duplex_energy(d) # 3 is a ad score - - energy = duplex2_energy(d2[0] + d2[1]) - print(' calc energy of U6-A59:U2-U23 [UA] duplex now:', d2[0] + d2[1], energy) - d2_energy = energy - row.append(energy) - - t1_3 = d2[0] + d2[1] + s[2] # U:A*A53 - t2_3 = d2[0] + d2[1] + s[0] # U2-A59:U2-U23*U57 - t2_4 = s[1] + 'C' + s[2] # ? # a27/c29/a53 - t3_3 = s[1] + s[0] + s[2] # a27/u57/53 ? - - headers += ['t1_3_1', 't1_3_2', 't1_3_3', - 't2_2_1', 't2_2_2', 't2_2_3', - 't2_4_1', 't2_4_2', 't2_4_3', - 't3_3_1', 't3_3_2', 't3_3_3'] - - row += [t1_3[0], t1_3[1], t1_3[2], - t2_3[0], t2_3[1], t2_3[2], - t2_4[0], t2_4[1], t2_4[2], - t3_3[0], t3_3[1], t3_3[2]] - - for triple_id, triple_id_t in [(t1_3, 't1_3'), - (t2_3, 't2_3'), - (t2_4, 't2_4'), - (t3_3, 't3_3'), - ]: - rowt, headerst = score_trx(triple_id, triple_id_t) # scores, headers - row += rowt - headers += headerst # header once is fine # ugly - - if 0: - ic(len(row)) - ic(len(headers)) - - c = 0 - for r, h in zip(row, headers): - c += 1 - print(c, h, r) - - g = float(growth) # ACG-0.5 - - ## sc = round(sc, 2) - ## if g == 1: - ## print('^ grow:', g, sc) - ## elif g == 0: - ## print('x dead ', g, sc) - ## else: - ## print('/ semi ', g, sc) - - # growth binary - if growth > 0: - row += [1] - else: - row += [0] - # collects rows - rows.append(row) - - headers.append('growth') - - with open('splix.csv', 'w') as f: - f.write(','.join([str(h) for h in headers]) + '\n') - for row in rows: - f.write(','.join([str(x) for x in row]) + '\n') - # ic(t3_3, get_trx(t3_3, 't3_3')) - diff --git a/rna_tools/tools/triplexibility/test.sh b/rna_tools/tools/triplexibility/test.sh deleted file mode 100755 index b5c8bb403..000000000 --- a/rna_tools/tools/triplexibility/test.sh +++ /dev/null @@ -1,5 +0,0 @@ -#./triplexibility2.py -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --result data/db_trx2.csv --sort --save -# python splix2.py '' -#apython trx_score_growth.py -#./triplexibility2.py -t data/gt11_cgC_rpr.pdb --result data/db_trx2.csv --sort --save - diff --git a/rna_tools/tools/triplexibility/test_all.sh b/rna_tools/tools/triplexibility/test_all.sh deleted file mode 100644 index 4ce40c13c..000000000 --- a/rna_tools/tools/triplexibility/test_all.sh +++ /dev/null @@ -1,43 +0,0 @@ -./triplexibility2.py -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --result data/db_trx2.csv --sort --save - -#set -x -#python splix.py # --d2 UA --growth 1 # wt U57:A27.A53 -#python seqs.py AAG-0 # U57:A27.A53 -#python seqs.py AUG-1 # suppresion -#python seqs.py ACG-0.5 # half-suppression -#python seqs.py AGG-0 # -#open splix.csv - -# triplexibility.py -#./triplexibility.py -t data/still-wrong/t2-4.pdb data/still-wrong/0.90-Triple_tHW_tHH_ACA_rpr_renm.pdb -#./triplexibility.py --triple-mode --tseq UUU --way backbone+sugar -t data/still-wrong/t2-4.pdb data/still-wrong/* --save --debug - - -#./triplexibility.py --triple-mode --tseq aca --way backbone+sugar -t data/still-wrong/t2-4.pdb data/still-wrong/0.90-Triple_tHW_tHH_ACA_rpr_renm_fx.pdb --save --debug -# still-wrong/* - -#--verbose -#0.90-Triple_tHW_tHH_ACA_rpr_renm.pdb --save --triple-mode -#./triplexibility.py --triple-mode --way c1+Nx -t data/still-wrong/t2-4.pdb data/still-wrong/* -#0.90-Triple_tHW_tHH_ACA_rpr_renm.pdb - -# --tseq aca # --way backbone+sugar -# data/still-wrong/t2-4.pdb -# --way backbone+sugar# -#./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb db/triples-all-v2-rpr/* --result data/spl-1-1.csv --sort #--save #--debug -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --files db/triples-all-v2-rpr/* --result data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.csv --sort #--save #--debug - -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --files \ - db/triples-all-v2-rpr/*cWW_cHS_GCU* --result data/cWW_cHS_GCU.csv --sort #--save #--debug - -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --files \ - db/triples-all-v2-rpr/*cWW* --result data/XcWWX.csv --sort #--save #--debug - -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --files \ - db/triples-all-v2-rpr/*cWW* --result data/XcWWX.csv --sort --save #--debug - -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --files \ - db/triples-all-v2-rpr/*cWW* --result data/XcWWX.csv --sort --save #--debug - -./triplexibility.py --triple-mode -t data/t1-1-Triple_cWW_cHS_GCU_exemplar_rpr_fx.pdb --result data/db.csv --sort # --save #--debug - diff --git a/rna_tools/tools/triplexibility/triple-db.csv b/rna_tools/tools/triplexibility/triple-db.csv deleted file mode 100644 index e639283cd..000000000 --- a/rna_tools/tools/triplexibility/triple-db.csv +++ /dev/null @@ -1,7206 +0,0 @@ -triple,instances,clashes,near,exists,contacts_bo,contacts_no_bk,contacts_rpr,clashscore_rpr,clashscore_no_bk,clashscore_bo,,, -cSW_cSH_CAA,0,4,0,1,2,4,5,30,12.2,0,,, -cSW_cSH_CAG,0,7,0,1,1,2,2,0,0,0,,, -cSW_tHW_CAA,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_CAC,0,13,0,1,3,4,4,132.65,112.5,0,,, -cSW_tSS_CAA,0,0,0,1,1,2,3,0,0,0,,, -cSW_tSS_CAG,0,1,0,1,1,2,2,9.9,0,0,,, -cSW_tSW_UGC,0,21,0,1,4,4,4,10.42,0,0,,, -cWH_cSH_UGC,0,0,0,1,1,1,2,0,0,0,,, -cWW_cSH_UGC,0,1,0,1,3,3,3,0,0,0,,, -cWW_tHS_CAA,0,8,0,1,2,2,2,0,0,0,,, -cWW_tHS_CAC,0,21,0,1,2,4,4,163.27,200,0,,, -cWW_tSW_CAC,0,0,0,1,2,2,2,0,0,0,,, -tHH_cSH_CAC,0,1,0,1,2,2,2,0,0,0,,, -tHH_tSS_CAC,0,0,0,1,1,3,3,0,0,0,,, -tSH_tSW_CAC,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSH_UGC,0,1,1,1,2,3,3,0,0,0,,, -tSW_tHS_CAA,0,97,0,1,2,5,5,112.24,25,0,,, -tSW_tHS_CAC,0,86,0,1,2,4,4,72.16,37.97,0,,, -tSW_tHS_CUG,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_CAA,0,4,0,1,3,4,5,30,12.2,0,,, -tWH_cSH_CAG,0,7,0,1,2,2,2,0,0,0,,, -tWH_tSW_UGC,0,1,0,1,3,5,5,10.2,12.5,0,,, -tWW_cSH_CAC,0,1,0,1,3,3,3,0,0,0,,, -tWW_tHW_CAA,0,0,0,1,4,4,4,0,0,0,,, -tWW_tHW_CAC,0,13,0,1,4,4,4,132.65,112.5,0,,, -tWW_tHW_CUG,0,0,0,1,4,4,4,0,0,0,,, -tWW_tSS_CAA,0,0,0,1,2,2,3,0,0,0,,, -tWW_tSS_CAG,0,1,0,1,2,4,4,9.9,12.05,0,,, -tWW_tSW_UGC,0,16,0,1,4,4,3,30.61,37.5,0,,, -tHH_tSS_GCA,4,0,0,1,1,2,2,0,0,0,,, -cHH_cSH_AGA,0,1,0,1,2,0,2,9.71,11.76,23.26,,, -cHH_cSH_AGC,0,0,0,1,1,1,1,0,0,0,,, -cHH_cSH_AGG,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSH_CGA,0,3,0,1,1,1,1,19.8,24.1,24.39,,, -cHH_cSH_CGC,0,1,0,1,0,0,0,10.1,12.35,0,,, -cHH_cSH_CGG,0,1,0,1,1,1,2,9.8,11.9,0,,, -cHH_cSH_CGU,0,1,0,1,1,1,1,10.2,12.5,0,,, -cHH_cSH_GAA,0,4,0,1,2,3,4,29.13,11.76,0,,, -cHH_cSH_GAC,0,1,0,1,2,2,2,0,0,0,,, -cHH_cSH_GAG,0,7,0,1,1,1,1,0,0,0,,, -cHH_cSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -cHH_cSH_GCA,0,32,0,1,1,1,2,150,134.15,0,,, -cHH_cSH_GCC,0,6,0,1,1,1,1,60.61,74.07,51.28,,, -cHH_cSH_GCU,0,32,0,1,0,0,1,154.64,139.24,0,,, -cHH_cSH_GGA,0,28,0,1,1,1,2,9.62,11.63,22.73,,, -cHH_cSH_GGC,0,23,0,1,0,0,2,69.31,24.1,0,,, -cHH_cSH_GGG,0,15,0,1,1,0,3,28.57,22.99,0,,, -cHH_cSH_GGU,0,23,0,1,1,1,3,70,24.39,0,,, -cHH_cSS_AGA,0,0,0,1,1,3,3,0,0,0,,, -cHH_cSS_AGC,0,2,0,1,1,1,1,0,0,0,,, -cHH_cSS_AGG,0,0,0,1,1,2,4,0,0,0,,, -cHH_cSS_AGU,0,0,0,1,1,1,1,0,0,0,,, -cHH_cSS_CGA,0,1,0,1,0,0,0,9.9,12.05,0,,, -cHH_cSS_CGC,0,16,0,1,0,0,0,141.41,123.46,0,,, -cHH_cSS_CGG,0,1,0,1,0,2,2,9.8,11.9,0,,, -cHH_cSS_CGU,0,1,0,1,0,1,2,10.2,12.5,0,,, -cHH_cSS_GAA,0,5,0,1,1,1,1,9.8,0,0,,, -cHH_cSS_GAC,0,6,0,1,1,1,1,0,0,0,,, -cHH_cSS_GAG,0,5,0,1,2,2,2,9.71,0,0,,, -cHH_cSS_GAU,0,1,0,1,1,4,4,0,0,0,,, -cHH_cSS_GCA,0,34,0,1,0,1,2,0,0,0,,, -cHH_cSS_GCC,0,34,0,1,0,0,1,101.01,61.73,0,,, -cHH_cSS_GCG,0,32,0,1,1,2,3,148.51,132.53,0,,, -cHH_cSS_GCU,0,32,0,1,0,0,1,154.64,139.24,0,,, -cHH_cSS_GGA,0,37,0,1,0,0,2,176.47,71.43,0,,, -cHH_cSS_GGC,0,45,0,1,0,0,1,130,108.43,0,,, -cHH_cSS_GGG,0,25,0,1,0,2,4,67.31,23.26,0,,, -cHH_cSS_GGU,0,6,0,1,0,0,1,59.41,36.14,0,,, -cHH_cSW_AGA,0,0,0,1,1,1,1,0,0,0,,, -cHH_cSW_AGC,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSW_AGG,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSW_AGU,0,0,0,1,3,3,3,0,0,0,,, -cHH_cSW_CGA,0,1,0,1,0,0,0,9.9,12.05,0,,, -cHH_cSW_CGC,0,1,0,1,1,1,1,10.1,12.35,0,,, -cHH_cSW_CGG,0,1,0,1,1,1,1,9.8,11.9,0,,, -cHH_cSW_CGU,0,3,0,1,2,2,2,10.31,12.5,0,,, -cHH_cSW_GAA,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSW_GAC,0,0,0,1,2,2,2,0,0,0,,, -cHH_cSW_GAG,0,2,0,1,1,1,1,19.23,0,0,,, -cHH_cSW_GAU,0,1,0,1,2,3,3,10,12.2,0,,, -cHH_cSW_GCA,0,32,0,1,1,1,1,150,134.15,0,,, -cHH_cSW_GCC,0,32,0,1,1,1,1,153.06,137.5,0,,, -cHH_cSW_GCG,0,32,0,1,2,2,2,148.51,132.53,0,,, -cHH_cSW_GCU,0,14,0,1,1,1,0,51.55,25,0,,, -cHH_cSW_GGA,0,6,0,1,0,1,2,57.69,34.88,0,,, -cHH_cSW_GGC,0,32,0,1,1,2,3,178.22,72.29,0,,, -cHH_cSW_GGG,0,6,0,1,1,2,3,57.14,34.48,0,,, -cHH_cSW_GGU,0,32,0,1,2,2,2,10.1,12.2,0,,, -cHH_tSH_AGA,0,1,0,1,3,3,3,0,0,0,,, -cHH_tSH_AGG,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSH_CGA,0,1,0,1,2,2,2,9.9,12.05,0,,, -cHH_tSH_CGG,0,1,0,1,1,1,1,9.9,11.9,0,,, -cHH_tSH_CGU,0,1,0,1,1,1,1,10.31,12.5,0,,, -cHH_tSH_GAA,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSH_GAC,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -cHH_tSH_GCA,0,32,0,1,1,1,1,150,134.15,0,,, -cHH_tSH_GCC,0,32,0,1,1,1,1,153.06,137.5,0,,, -cHH_tSH_GGA,0,23,0,1,2,2,3,67.96,23.53,0,,, -cHH_tSH_GGG,0,3,0,1,1,1,3,28.85,0,0,,, -cHH_tSH_GGU,0,2,0,1,1,1,3,0,0,0,,, -cHH_tSS_AGA,0,1,0,1,1,1,1,9.71,0,0,,, -cHH_tSS_AGC,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSS_AGG,0,0,0,1,3,4,4,0,0,0,,, -cHH_tSS_AGU,0,0,0,1,2,3,3,0,0,0,,, -cHH_tSS_CGA,0,3,0,1,0,0,0,19.8,12.05,0,,, -cHH_tSS_CGC,0,1,0,1,1,1,1,10.2,12.35,0,,, -cHH_tSS_CGG,0,3,0,1,2,3,3,9.8,11.9,0,,, -cHH_tSS_CGU,0,1,0,1,1,2,2,10.31,12.5,0,,, -cHH_tSS_GAA,0,0,0,1,1,2,2,0,0,0,,, -cHH_tSS_GAC,0,0,0,1,1,2,2,0,0,0,,, -cHH_tSS_GAG,0,1,0,1,2,3,3,9.62,11.63,22.73,,, -cHH_tSS_GAU,0,1,0,1,1,2,2,0,0,0,,, -cHH_tSS_GGA,0,32,0,1,0,0,0,203.88,23.53,0,,, -cHH_tSS_GGC,0,0,0,1,1,1,2,0,0,0,,, -cHH_tSS_GGG,0,17,0,1,2,3,4,76.92,68.97,0,,, -cHH_tSS_GGU,0,24,0,1,1,2,2,0,0,0,,, -cHH_tSW_AGA,0,0,0,1,3,3,3,0,0,0,,, -cHH_tSW_AGC,0,0,0,1,3,3,3,0,0,0,,, -cHH_tSW_AGU,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSW_CGA,0,1,0,1,2,2,2,9.9,12.05,0,,, -cHH_tSW_CGC,0,3,0,1,2,3,3,20.41,24.69,0,,, -cHH_tSW_CGU,0,1,0,1,1,1,1,10.31,12.5,26.32,,, -cHH_tSW_GAA,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSW_GAC,0,0,0,1,2,2,2,0,0,0,,, -cHH_tSW_GAU,0,3,0,1,2,3,3,0,0,0,,, -cHH_tSW_GCA,0,32,0,1,1,1,1,150,134.15,0,,, -cHH_tSW_GCC,0,11,0,1,1,1,0,10.31,12.35,0,,, -cHH_tSW_GCG,0,27,0,1,2,2,2,118.81,47.62,23.81,,, -cHH_tSW_GCU,0,39,0,1,1,1,1,81.63,75,0,,, -cHH_tSW_GGA,0,12,0,1,2,2,2,9.8,34.88,0,,, -cHH_tSW_GGC,0,30,0,1,2,2,2,198.02,24.1,0,,, -cHH_tSW_GGU,0,8,0,1,1,1,2,0,0,24.39,,, -cHW_cHH_AGA,0,1,0,1,3,3,3,9.71,11.76,23.26,,, -cHW_cHH_AGC,0,2,0,1,2,2,2,10,12.05,0,,, -cHW_cHH_AGG,0,6,0,1,2,2,3,57.69,0,0,,, -cHW_cHH_CCG,0,4,0,1,1,1,2,20.2,12.35,0,,, -cHW_cHH_GAG,0,1,0,1,2,2,3,9.62,11.63,22.73,,, -cHW_cHH_GCG,0,5,0,1,1,1,2,49.02,23.81,0,,, -cHW_cHH_GGA,0,0,2,1,4,4,4,0,0,0,,, -cHW_cHH_GGC,0,12,0,1,2,2,3,9.8,11.9,0,,, -cHW_cHH_GGG,0,2,0,1,2,2,3,19.05,0,0,,, -cHW_cHH_UAG,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHH_UCG,0,2,0,1,1,1,1,20.41,25,0,,, -cHW_cHS_AGA,0,4,0,1,2,4,2,9.9,0,0,,, -cHW_cHS_AGG,0,9,0,1,3,3,4,9.71,0,0,,, -cHW_cHS_AUA,0,4,0,1,3,3,3,30.3,37.04,76.92,,, -cHW_cHS_AUC,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHS_AUG,2,0,0,1,3,3,3,0,0,0,,, -cHW_cHS_AUU,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHS_CCA,0,8,0,1,2,2,2,20.62,0,0,,, -cHW_cHS_CCC,0,9,0,1,2,2,3,84.21,76.92,55.56,,, -cHW_cHS_CCG,0,0,0,1,1,2,2,0,0,0,,, -cHW_cHS_CCU,0,0,0,1,2,2,3,0,0,0,,, -cHW_cHS_GAA,0,7,0,1,2,3,5,9.71,11.76,23.26,,, -cHW_cHS_GAC,0,1,0,1,2,2,3,10,12.05,24.39,,, -cHW_cHS_GAG,0,9,0,1,2,3,5,86.54,23.26,45.45,,, -cHW_cHS_GAU,0,1,0,1,2,3,4,10,12.2,25,,, -cHW_cHS_GCA,3,1,1,1,2,2,4,10,12.05,0,,, -cHW_cHS_GCC,0,2,0,1,2,2,2,20.2,24.69,51.28,,, -cHW_cHS_GCG,0,0,0,1,2,3,4,0,0,0,,, -cHW_cHS_GCU,0,4,0,1,2,2,3,20.41,12.5,0,,, -cHW_cHS_GGA,0,2,0,1,2,4,4,9.71,0,0,,, -cHW_cHS_GGG,0,2,0,1,3,3,3,0,0,0,,, -cHW_cHS_GUA,0,1,0,1,1,1,3,10,12.2,25,,, -cHW_cHS_GUC,0,14,0,1,1,1,2,132.65,112.5,0,,, -cHW_cHS_GUG,0,2,0,1,2,2,4,0,0,0,,, -cHW_cHS_GUU,0,1,0,1,1,1,3,0,0,0,,, -cHW_cHS_UAA,0,6,0,1,2,3,4,0,0,0,,, -cHW_cHS_UAC,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHS_UAG,0,8,0,1,2,3,4,80,12.2,25,,, -cHW_cHS_UAU,0,0,0,1,2,3,3,0,0,0,,, -cHW_cHS_UCA,0,17,0,1,2,2,3,0,0,0,,, -cHW_cHS_UCC,0,13,0,1,2,0,2,75.27,77.92,57.14,,, -cHW_cHS_UCG,0,0,0,1,1,2,2,0,0,0,,, -cHW_cHS_UCU,0,4,0,1,2,2,2,0,0,0,,, -cHW_cHS_UUA,0,0,0,1,1,1,1,0,0,0,,, -cHW_cHS_UUC,0,6,0,1,1,1,1,63.83,0,0,,, -cHW_cHS_UUG,0,2,0,1,2,2,2,0,0,0,,, -cHW_cHS_UUU,0,2,0,1,1,1,1,0,0,0,,, -cHW_cHW_AGA,0,1,0,1,3,3,3,9.71,11.76,23.26,,, -cHW_cHW_AGC,0,0,0,1,3,3,4,0,0,0,,, -cHW_cHW_AGG,0,0,0,1,5,5,5,0,0,0,,, -cHW_cHW_AGU,0,6,0,1,3,3,3,50,0,0,,, -cHW_cHW_AUA,0,0,0,1,3,3,3,0,0,0,,, -cHW_cHW_AUC,0,0,0,1,3,3,3,0,0,0,,, -cHW_cHW_AUU,0,0,0,1,4,4,4,0,0,0,,, -cHW_cHW_CCC,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHW_GAG,0,1,0,1,3,3,5,9.62,11.63,22.73,,, -cHW_cHW_GAU,0,2,0,1,3,3,4,20,12.2,25,,, -cHW_cHW_GCC,0,0,0,1,2,2,3,0,0,0,,, -cHW_cHW_GGA,0,1,0,1,3,3,3,9.62,11.63,22.73,,, -cHW_cHW_GGC,0,0,0,1,3,3,4,0,0,0,,, -cHW_cHW_GGG,19,0,0,1,4,4,4,0,0,0,,, -cHW_cHW_GGU,0,11,0,1,3,3,3,118.81,0,0,,, -cHW_cHW_GUA,0,0,0,1,2,2,4,0,0,0,,, -cHW_cHW_GUC,0,0,0,1,2,2,4,0,0,0,,, -cHW_cHW_GUU,0,0,0,1,2,2,4,0,0,0,,, -cHW_cHW_UAG,0,0,0,1,3,3,4,0,0,0,,, -cHW_cHW_UAU,0,1,0,1,3,3,3,10.42,0,0,,, -cHW_cHW_UCC,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHW_UUA,0,0,0,1,2,2,2,0,0,0,,, -cHW_cHW_UUC,0,0,0,1,2,0,2,0,0,0,,, -cHW_cHW_UUU,3,0,2,1,2,2,2,0,0,0,,, -cHW_cSH_AGA,0,1,0,1,3,3,3,9.71,11.76,23.26,,, -cHW_cSH_AGC,0,1,0,1,2,2,2,0,0,0,,, -cHW_cSH_AGG,0,0,0,1,3,3,3,0,0,0,,, -cHW_cSH_AGU,0,0,0,1,3,3,3,0,0,0,,, -cHW_cSH_AUA,0,0,0,1,3,4,4,0,0,0,,, -cHW_cSH_AUC,0,5,0,1,3,3,3,20.62,12.66,0,,, -cHW_cSH_AUU,0,3,0,1,2,2,2,20.83,12.82,0,,, -cHW_cSH_CCA,0,2,0,1,2,3,3,20.41,12.5,26.32,,, -cHW_cSH_CCC,0,13,0,1,1,0,1,42.55,52.63,117.65,,, -cHW_cSH_CCU,0,15,0,1,1,2,2,147.37,116.88,0,,, -cHW_cSH_GAA,0,5,0,1,2,3,5,38.83,23.53,23.26,,, -cHW_cSH_GAC,0,2,0,1,2,2,3,9.9,12.05,24.39,,, -cHW_cSH_GAG,0,8,0,1,1,1,2,9.71,11.76,22.73,,, -cHW_cSH_GAU,0,1,0,1,1,1,2,10,12.2,25,,, -cHW_cSH_GCA,0,2,0,1,2,3,4,19.8,12.05,24.39,,, -cHW_cSH_GCC,0,11,0,1,1,3,3,41.24,50.63,54.05,,, -cHW_cSH_GCU,0,20,0,1,1,2,2,193.88,125,26.32,,, -cHW_cSH_GGA,0,6,0,1,3,3,5,19.61,11.9,23.81,,, -cHW_cSH_GGC,0,1,0,1,2,2,2,0,0,0,,, -cHW_cSH_GGG,0,0,0,1,3,3,4,0,0,0,,, -cHW_cSH_GGU,0,0,2,1,3,0,3,0,0,0,,, -cHW_cSH_GUA,0,1,0,1,2,2,3,0,0,0,,, -cHW_cSH_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -cHW_cSH_GUU,0,5,0,1,1,2,2,30.93,25.32,0,,, -cHW_cSH_UAA,0,4,0,1,2,3,4,30.3,12.35,0,,, -cHW_cSH_UAC,0,1,0,1,2,2,2,0,0,0,,, -cHW_cSH_UAG,0,7,0,1,1,1,1,0,0,0,,, -cHW_cSH_UAU,0,0,0,1,1,1,1,0,0,0,,, -cHW_cSH_UCA,0,1,0,1,2,2,2,10.31,0,0,,, -cHW_cSH_UCC,0,10,0,1,2,2,2,94.74,116.88,142.86,,, -cHW_cSH_UCU,0,15,0,1,1,2,2,148.94,118.42,0,,, -cHW_cSH_UUA,0,0,0,1,2,3,3,0,0,0,,, -cHW_cSH_UUC,0,6,0,1,2,3,3,31.91,26.32,29.41,,, -cHW_cSH_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -cHW_cSS_AGA,0,0,0,1,2,4,4,0,0,0,,, -cHW_cSS_AGC,0,0,0,1,2,3,3,0,0,0,,, -cHW_cSS_AGG,0,0,0,1,2,3,5,0,0,0,,, -cHW_cSS_AGU,0,0,0,1,2,2,2,0,0,0,,, -cHW_cSS_AUA,0,3,0,1,2,4,4,20.2,12.35,0,,, -cHW_cSS_AUC,0,13,0,1,2,2,2,134.02,113.92,0,,, -cHW_cSS_AUG,0,3,0,1,3,4,3,20,12.2,0,,, -cHW_cSS_AUU,0,3,0,1,2,2,2,20.83,12.82,0,,, -cHW_cSS_CCA,0,0,0,1,1,3,4,0,0,0,,, -cHW_cSS_CCC,0,0,0,1,1,0,1,0,0,0,,, -cHW_cSS_CCG,0,1,0,1,2,3,3,0,0,0,,, -cHW_cSS_CCU,0,0,0,1,1,3,3,0,0,0,,, -cHW_cSS_GAA,0,6,0,1,1,1,2,19.61,11.9,23.26,,, -cHW_cSS_GAC,0,7,0,1,1,1,2,10,12.2,24.39,,, -cHW_cSS_GAG,0,6,0,1,2,2,3,19.42,11.76,22.73,,, -cHW_cSS_GAU,0,1,0,1,1,3,4,10,12.2,25,,, -cHW_cSS_GCA,0,0,1,1,1,4,4,0,0,0,,, -cHW_cSS_GCC,0,0,0,1,1,3,4,0,0,0,,, -cHW_cSS_GCG,0,1,0,1,2,3,4,0,0,0,,, -cHW_cSS_GCU,0,0,0,1,1,3,4,0,0,0,,, -cHW_cSS_GGA,0,0,0,1,2,4,4,0,0,0,,, -cHW_cSS_GGC,0,0,0,1,2,3,3,0,0,0,,, -cHW_cSS_GGG,0,1,0,1,2,4,4,9.52,11.49,0,,, -cHW_cSS_GGU,0,0,0,1,2,2,2,0,0,0,,, -cHW_cSS_GUA,0,3,0,1,1,3,3,20,12.2,0,,, -cHW_cSS_GUC,0,1,0,1,1,2,2,0,0,0,,, -cHW_cSS_GUG,0,4,0,1,2,5,5,0,0,0,,, -cHW_cSS_GUU,0,3,0,1,1,1,2,20.62,12.66,0,,, -cHW_cSS_UAA,0,5,0,1,1,1,1,10.2,0,0,,, -cHW_cSS_UAC,0,6,0,1,1,1,1,0,0,0,,, -cHW_cSS_UAG,0,5,0,1,2,2,2,10.1,0,0,,, -cHW_cSS_UAU,0,0,0,1,1,3,3,0,0,0,,, -cHW_cSS_UCA,0,0,0,1,1,3,3,0,0,0,,, -cHW_cSS_UCC,0,0,0,1,1,1,1,0,0,0,,, -cHW_cSS_UCG,0,1,0,1,2,3,3,0,0,0,,, -cHW_cSS_UCU,0,0,0,1,1,0,3,0,0,0,,, -cHW_cSS_UUA,0,3,0,1,1,3,3,20.83,12.82,0,,, -cHW_cSS_UUC,0,1,0,1,1,2,2,10.64,13.16,0,,, -cHW_cSS_UUG,0,3,0,1,2,3,3,20.62,12.66,0,,, -cHW_cSS_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -cHW_cSW_AGA,0,1,0,1,2,2,2,0,0,0,,, -cHW_cSW_AGC,0,1,0,1,3,3,3,0,0,0,,, -cHW_cSW_AGG,0,0,0,1,3,3,3,0,0,0,,, -cHW_cSW_AGU,0,0,0,1,4,4,4,0,0,0,,, -cHW_cSW_AUA,1,0,0,1,3,3,4,0,0,0,,, -cHW_cSW_AUC,0,3,0,1,3,3,3,20.62,12.66,0,,, -cHW_cSW_AUG,0,74,0,1,4,6,9,123.71,12.35,0,,, -cHW_cSW_AUU,0,10,0,1,3,5,5,20.83,25.64,0,,, -cHW_cSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -cHW_cSW_CCC,0,14,0,1,2,2,2,135.42,115.38,0,,, -cHW_cSW_CCG,0,25,0,1,3,3,4,131.31,111.11,0,,, -cHW_cSW_CCU,0,12,0,1,2,3,3,10.53,12.99,0,,, -cHW_cSW_GAA,0,1,0,1,2,2,3,9.71,11.76,23.26,,, -cHW_cSW_GAC,0,1,0,1,2,3,4,9.9,12.05,24.39,,, -cHW_cSW_GAG,0,4,0,1,1,1,2,28.85,11.63,22.73,,, -cHW_cSW_GAU,0,1,0,1,2,3,4,10,12.2,25,,, -cHW_cSW_GCA,0,14,0,1,2,2,2,128.71,108.43,0,,, -cHW_cSW_GCC,0,14,0,1,2,2,2,131.31,111.11,0,,, -cHW_cSW_GCG,0,11,0,1,4,4,5,98.04,119.05,238.1,,, -cHW_cSW_GCU,0,11,0,1,3,0,4,102.04,125,263.16,,, -cHW_cSW_GGA,0,1,0,1,2,2,2,0,0,0,,, -cHW_cSW_GGC,0,1,0,1,3,3,3,0,0,0,,, -cHW_cSW_GGG,0,0,0,1,3,3,4,0,0,0,,, -cHW_cSW_GGU,0,0,0,1,4,4,5,0,0,0,,, -cHW_cSW_GUA,0,0,0,1,2,2,2,0,0,0,,, -cHW_cSW_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -cHW_cSW_GUG,0,30,0,1,3,2,4,69.31,36.14,0,,, -cHW_cSW_GUU,0,2,0,1,2,3,3,10.31,12.66,27.03,,, -cHW_cSW_UAA,0,0,0,1,2,2,2,0,0,0,,, -cHW_cSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -cHW_cSW_UAG,0,2,0,1,1,1,1,20,0,0,,, -cHW_cSW_UAU,0,0,0,1,2,3,3,0,0,0,,, -cHW_cSW_UCA,0,14,0,1,2,2,2,134.02,113.92,0,,, -cHW_cSW_UCC,0,0,0,1,2,3,4,0,0,0,,, -cHW_cSW_UCG,0,16,0,1,3,3,4,142.86,125,26.32,,, -cHW_cSW_UCU,0,1,0,1,2,3,3,10.64,13.16,29.41,,, -cHW_cSW_UUA,0,3,0,1,2,2,2,20.83,12.82,0,,, -cHW_cSW_UUC,0,0,0,1,2,5,5,0,0,0,,, -cHW_cSW_UUG,0,11,0,1,3,4,6,20.62,25.32,54.05,,, -cHW_cSW_UUU,0,12,0,1,2,3,3,0,0,0,,, -cHW_tHH_AGA,0,3,0,1,4,4,4,29.13,35.29,69.77,,, -cHW_tHH_AGC,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHH_AGG,0,3,0,1,2,2,4,9.62,11.63,0,,, -cHW_tHH_AUA,0,0,0,1,4,5,6,0,0,0,,, -cHW_tHH_AUC,0,0,0,1,3,4,5,0,0,0,,, -cHW_tHH_CCA,0,0,0,1,2,3,3,0,0,0,,, -cHW_tHH_CCG,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_CCU,0,0,0,1,2,3,3,0,0,0,,, -cHW_tHH_GAA,0,1,0,1,3,4,5,9.71,11.76,23.26,,, -cHW_tHH_GAC,0,1,0,1,2,2,3,9.9,12.05,24.39,,, -cHW_tHH_GAG,0,1,0,1,2,2,3,9.62,11.63,22.73,,, -cHW_tHH_GAU,0,1,0,1,2,3,4,10,12.2,25,,, -cHW_tHH_GCA,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_GCG,0,0,0,1,2,3,5,0,0,0,,, -cHW_tHH_GCU,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_GGA,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHH_GGC,0,0,0,1,3,4,4,0,0,0,,, -cHW_tHH_GGG,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHH_GUA,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_GUC,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_UAA,0,0,0,1,3,4,4,0,0,0,,, -cHW_tHH_UAC,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHH_UAG,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHH_UAU,0,0,0,1,2,3,3,0,0,0,,, -cHW_tHH_UCA,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_UCG,0,0,0,1,2,3,4,0,0,0,,, -cHW_tHH_UCU,0,0,0,1,2,3,3,0,0,0,,, -cHW_tHH_UUA,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHH_UUC,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHS_AGG,0,1,0,1,4,4,4,0,0,0,,, -cHW_tHS_AUA,3,0,3,1,3,3,4,0,0,25.64,,, -cHW_tHS_AUG,0,0,0,1,3,3,4,0,0,0,,, -cHW_tHS_CCA,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHS_CCC,0,13,0,1,2,2,2,135.42,115.38,0,,, -cHW_tHS_CCU,0,0,0,1,2,3,3,0,0,0,,, -cHW_tHS_GAA,0,6,0,1,2,2,3,19.61,23.81,23.26,,, -cHW_tHS_GAC,0,1,0,1,2,4,5,9.9,12.05,24.39,,, -cHW_tHS_GAG,0,4,0,1,3,5,6,38.46,46.51,22.73,,, -cHW_tHS_GAU,0,13,0,1,3,2,3,110,134.15,50,,, -cHW_tHS_GCA,0,5,0,1,2,2,3,10,0,0,,, -cHW_tHS_GCC,0,13,0,1,2,2,3,131.31,111.11,0,,, -cHW_tHS_GCU,0,4,0,1,2,2,3,20.41,12.5,0,,, -cHW_tHS_GGG,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHS_GUA,0,0,0,1,1,1,3,0,0,0,,, -cHW_tHS_GUG,0,0,0,1,2,2,4,0,0,0,,, -cHW_tHS_UAA,0,5,0,1,2,2,2,10.2,12.5,0,,, -cHW_tHS_UAC,0,0,0,1,2,4,4,0,0,0,,, -cHW_tHS_UAG,0,3,0,1,3,5,5,30,36.59,0,,, -cHW_tHS_UAU,0,12,0,1,3,2,2,104.17,128.21,27.78,,, -cHW_tHS_UCA,0,5,0,1,2,2,2,10.42,0,0,,, -cHW_tHS_UCC,0,13,0,1,2,2,2,136.84,116.88,0,,, -cHW_tHS_UCU,0,4,0,1,2,2,2,21.28,13.16,0,,, -cHW_tHS_UUA,0,0,0,1,1,1,1,0,0,0,,, -cHW_tHS_UUG,0,0,0,1,2,2,2,0,0,0,,, -cHW_tHW_AGA,0,0,0,1,3,3,4,0,0,0,,, -cHW_tHW_AGC,0,1,0,1,4,4,4,9.9,12.05,24.39,,, -cHW_tHW_AGG,0,0,0,1,5,5,6,0,0,0,,, -cHW_tHW_AGU,0,5,0,1,3,4,4,0,0,0,,, -cHW_tHW_AUG,0,1,0,1,4,4,4,10,12.2,25,,, -cHW_tHW_AUU,4,0,2,1,4,4,5,0,0,0,,, -cHW_tHW_CCC,0,0,0,1,2,2,3,0,0,0,,, -cHW_tHW_GAA,0,1,0,1,3,3,4,9.71,11.76,23.26,,, -cHW_tHW_GAC,0,1,0,1,3,3,4,9.9,12.05,24.39,,, -cHW_tHW_GAU,0,2,0,1,3,3,4,20,12.2,25,,, -cHW_tHW_GCC,0,0,0,1,2,2,4,0,0,0,,, -cHW_tHW_GGA,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHW_GGC,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHW_GGG,0,0,0,1,5,5,5,0,0,0,,, -cHW_tHW_GGU,0,4,0,1,3,4,4,39.6,0,0,,, -cHW_tHW_GUG,0,0,0,1,3,3,5,0,0,0,,, -cHW_tHW_GUU,0,0,0,1,2,2,4,0,0,0,,, -cHW_tHW_UAA,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHW_UAC,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHW_UAU,0,1,0,1,3,3,3,10.42,0,0,,, -cHW_tHW_UCC,0,1,0,1,2,2,3,10.53,0,0,,, -cHW_tHW_UUG,0,0,0,1,3,3,3,0,0,0,,, -cHW_tHW_UUU,0,0,0,1,2,2,2,0,0,0,,, -cHW_tSH_AGA,0,1,0,1,4,4,4,0,0,0,,, -cHW_tSH_AGG,0,0,0,1,3,0,4,0,0,0,,, -cHW_tSH_AGU,0,0,0,1,3,3,3,0,0,0,,, -cHW_tSH_AUA,0,7,0,1,3,3,3,50.51,49.38,25.64,,, -cHW_tSH_AUC,0,2,0,1,3,4,4,0,0,0,,, -cHW_tSH_CCA,0,13,0,1,2,3,3,20.41,25,0,,, -cHW_tSH_CCC,0,19,0,1,2,2,2,145.83,128.21,0,,, -cHW_tSH_GAA,0,2,0,1,2,2,2,9.71,11.76,23.26,,, -cHW_tSH_GAC,0,1,0,1,2,2,3,9.9,12.05,24.39,,, -cHW_tSH_GAU,0,9,0,1,1,1,1,50.51,61.73,100,,, -cHW_tSH_GCA,0,30,0,1,2,3,3,148.51,60.24,121.95,,, -cHW_tSH_GCC,0,23,0,1,2,2,3,202.02,197.53,102.56,,, -cHW_tSH_GGA,0,1,0,1,4,4,5,0,0,0,,, -cHW_tSH_GGG,0,8,0,1,3,3,5,66.67,80.46,111.11,,, -cHW_tSH_GGU,0,3,0,1,3,3,3,29.7,36.14,73.17,,, -cHW_tSH_GUA,0,22,0,1,2,3,5,100,73.17,25,,, -cHW_tSH_GUC,0,8,0,1,2,4,5,81.63,100,0,,, -cHW_tSH_UAA,0,0,0,1,2,2,2,0,0,0,,, -cHW_tSH_UAC,0,0,0,1,2,2,2,0,0,0,,, -cHW_tSH_UAU,0,0,0,1,1,1,1,0,0,0,,, -cHW_tSH_UCA,0,1,0,1,2,2,2,0,0,0,,, -cHW_tSH_UCC,0,14,0,1,2,2,2,136.84,116.88,0,,, -cHW_tSH_UUA,0,7,0,1,2,2,2,52.08,51.28,27.78,,, -cHW_tSH_UUC,0,2,0,1,2,3,3,21.28,26.32,58.82,,, -cHW_tSW_AGA,0,0,0,1,4,4,4,0,0,0,,, -cHW_tSW_AGC,0,13,0,1,4,4,4,170,108.43,0,,, -cHW_tSW_AGU,0,0,0,1,3,3,3,20.62,0,0,,, -cHW_tSW_AUA,0,0,0,1,3,3,3,180,0,0,,, -cHW_tSW_AUC,0,2,0,1,3,3,3,164.95,25.32,0,,, -cHW_tSW_AUG,0,70,0,1,3,4,5,0,222.22,75,,, -cHW_tSW_AUU,0,40,0,1,3,6,8,0,423.08,0,,, -cHW_tSW_CCA,0,14,0,1,2,2,2,20.83,112.5,0,,, -cHW_tSW_CCC,0,11,0,1,2,2,2,134.02,128.21,166.67,,, -cHW_tSW_CCG,0,7,0,1,3,4,4,21.05,49.38,102.56,,, -cHW_tSW_CCU,0,31,0,1,2,4,4,0,246.75,0,,, -cHW_tSW_GAA,0,2,0,1,2,2,2,53.19,11.76,23.26,,, -cHW_tSW_GAC,0,1,0,1,2,2,3,0,12.05,24.39,,, -cHW_tSW_GAU,0,3,0,1,2,2,3,0,36.59,25,,, -cHW_tSW_GCA,0,0,0,1,2,2,2,41.24,0,0,,, -cHW_tSW_GCC,0,53,0,1,3,2,5,64.52,37.5,51.28,,, -cHW_tSW_GCG,0,2,0,1,2,3,3,9.71,23.81,47.62,,, -cHW_tSW_GCU,0,65,0,1,2,5,5,0,12.66,0,,, -cHW_tSW_GGA,0,0,0,1,4,4,5,20.41,0,0,,, -cHW_tSW_GGC,0,0,0,1,4,4,5,20,0,0,,, -cHW_tSW_GGU,0,1,0,1,3,3,4,142.86,0,0,,, -cHW_tSW_GUA,0,16,0,1,3,3,3,244.9,207.32,0,,, -cHW_tSW_GUC,0,48,0,1,3,3,4,9.71,25.32,0,,, -cHW_tSW_GUG,0,39,0,1,2,3,4,19.23,120.48,97.56,,, -cHW_tSW_GUU,0,16,0,1,2,4,4,130,202.53,81.08,,, -cHW_tSW_UAA,0,0,0,1,2,2,2,245.1,0,0,,, -cHW_tSW_UAC,0,0,0,1,2,2,2,9.71,0,0,,, -cHW_tSW_UAU,0,2,0,1,2,2,2,0,25.64,0,,, -cHW_tSW_UCA,0,14,0,1,2,2,2,40,113.92,0,,, -cHW_tSW_UCC,0,2,0,1,3,2,2,10,25.97,0,,, -cHW_tSW_UCG,0,1,0,1,3,4,4,0,0,0,,, -cHW_tSW_UCU,0,5,0,1,2,5,5,10,65.79,117.65,,, -cHW_tSW_UUA,0,0,0,1,2,2,2,134.02,0,0,,, -cHW_tSW_UUC,0,0,0,1,2,2,2,438.78,0,0,,, -cHW_tSW_UUG,0,5,0,1,2,4,5,20.83,50.63,108.11,,, -cHW_tSW_UUU,0,6,0,1,2,3,3,0,80,151.52,,, -cHW_tSS_AGA,0,2,0,1,3,3,3,0,11.76,23.26,,, -cHW_tSS_AGG,0,3,0,1,4,4,4,128.71,0,0,,, -cHW_tSS_AUA,0,8,0,1,2,2,2,0,12.5,0,,, -cHW_tSS_AUG,0,4,0,1,3,4,4,0,24.39,0,,, -cHW_tSS_CCA,0,17,0,1,1,2,2,20.62,125,0,,, -cHW_tSS_CCG,0,67,0,1,2,5,9,202.02,250,128.21,,, -cHW_tSS_GAA,0,1,0,1,1,4,5,364.58,11.76,23.26,,, -cHW_tSS_GAG,0,3,0,1,1,1,1,132.65,11.63,22.73,,, -cHW_tSS_GCA,0,19,0,1,1,2,2,104.17,109.76,0,,, -cHW_tSS_GCG,0,98,0,1,2,7,3,50.51,166.67,47.62,,, -cHW_tSS_GGA,0,7,0,1,3,3,4,200,11.76,22.73,,, -cHW_tSS_GGG,0,3,1,1,4,4,5,9.71,0,0,,, -cHW_tSS_GUA,0,6,0,1,1,1,2,9.9,12.2,0,,, -cHW_tSS_GUG,0,8,0,1,2,3,3,30,12.2,0,,, -cHW_tSS_UAA,0,0,0,1,1,2,2,0,0,0,,, -cHW_tSS_UAG,0,1,0,1,1,1,1,31.25,0,0,,, -cHW_tSS_UCA,0,14,0,1,1,1,1,19.61,113.92,0,,, -cHW_tSS_UCG,0,44,0,1,2,4,5,20.62,375,0,,, -cHW_tSS_UUA,0,4,0,1,1,1,1,0,12.82,0,,, -cHW_tSS_UUG,0,1,0,1,2,2,2,0,0,0,,, -cSH_cSH_AAA,0,2,0,1,2,3,4,9.8,0,0,,, -cSH_cSH_AAC,0,3,0,1,2,3,3,10,0,0,,, -cSH_cSH_AAG,0,6,0,1,1,2,2,9.8,0,0,,, -cSH_cSH_AAU,0,2,0,1,1,2,3,20.41,0,0,,, -cSH_cSH_ACA,0,1,0,1,2,3,4,10,0,0,,, -cSH_cSH_ACC,0,3,0,1,2,2,2,30.61,37.5,52.63,,, -cSH_cSH_ACU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSH_AGA,0,3,0,1,1,3,3,19.42,11.76,23.26,,, -cSH_cSH_AGC,0,2,0,1,0,2,2,9.9,0,0,,, -cSH_cSH_AGG,0,2,0,1,1,3,4,9.62,0,0,,, -cSH_cSH_AGU,0,2,0,1,1,3,4,10,0,0,,, -cSH_cSH_AUA,0,0,0,1,1,2,2,0,0,0,,, -cSH_cSH_AUC,0,3,0,1,1,1,1,20.62,12.66,0,,, -cSH_cSH_AUU,0,3,0,1,0,0,0,20.83,12.82,0,,, -cSH_cSH_CAA,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSH_CAC,0,1,0,1,,,,,,,,, -cSH_cSH_CAG,0,1,0,1,1,1,2,0,0,0,,, -cSH_cSH_CAU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSH_CCA,0,7,0,1,2,3,5,71.43,75,52.63,,, -cSH_cSH_CCC,0,6,0,1,2,2,5,93.75,115.38,111.11,,, -cSH_cSH_CCU,0,6,0,1,1,1,3,63.16,77.92,57.14,,, -cSH_cSH_CUA,0,3,0,1,1,4,6,30.93,0,0,,, -cSH_cSH_CUC,0,0,0,1,1,1,2,0,0,0,,, -cSH_cSH_CUU,0,0,0,1,0,0,1,0,0,0,,, -cSH_cSH_GAA,0,3,0,1,2,5,7,29.13,11.76,23.26,,, -cSH_cSH_GAC,0,5,0,1,2,3,3,39.6,12.05,24.39,,, -cSH_cSH_GAG,0,2,0,1,1,2,4,9.62,11.63,22.73,,, -cSH_cSH_GAU,0,1,0,1,1,2,3,10.1,12.2,25,,, -cSH_cSH_GCA,0,1,0,1,1,3,3,9.9,0,0,,, -cSH_cSH_GCC,0,3,0,1,1,2,2,30.3,37.04,51.28,,, -cSH_cSH_GCU,0,15,0,1,0,2,2,142.86,112.5,0,,, -cSH_cSH_GGA,0,1,0,1,2,2,2,9.62,11.63,22.73,,, -cSH_cSH_GGC,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSH_GGG,0,0,0,1,2,2,4,0,0,0,,, -cSH_cSH_GGU,0,0,0,1,2,2,2,9.9,0,0,,, -cSH_cSH_GUA,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSH_GUC,0,1,0,1,2,2,4,0,0,0,,, -cSH_cSH_GUU,0,0,0,1,1,2,2,0,0,0,,, -cSH_cSH_UAA,0,4,0,1,2,4,5,30.3,12.35,0,,, -cSH_cSH_UAC,0,1,0,1,2,3,3,0,0,0,,, -cSH_cSH_UAG,0,7,0,1,1,2,2,0,0,0,,, -cSH_cSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -cSH_cSH_UCA,0,1,0,1,2,3,4,10.42,0,0,,, -cSH_cSH_UCC,0,3,0,1,2,2,2,31.58,38.96,57.14,,, -cSH_cSH_UCU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSH_UUA,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSH_UUC,0,0,0,1,1,1,2,0,0,0,,, -cSH_cSH_UUU,0,4,0,1,0,0,0,0,0,0,,, -cSH_cSS_AAA,0,5,0,1,1,2,2,9.9,0,0,,, -cSH_cSS_AAC,0,13,0,1,1,2,2,130,97.56,0,,, -cSH_cSS_AAG,0,0,0,1,2,4,4,0,0,0,,, -cSH_cSS_AAU,0,2,0,1,1,4,5,20.41,0,0,,, -cSH_cSS_ACA,0,0,2,1,1,1,1,0,0,0,,, -cSH_cSS_ACC,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_ACG,0,3,0,1,2,2,2,9.9,0,0,,, -cSH_cSS_ACU,0,3,0,1,1,1,1,20.62,12.66,0,,, -cSH_cSS_AGA,0,2,0,1,0,4,4,9.8,0,0,,, -cSH_cSS_AGC,0,17,0,1,0,2,2,138.61,108.43,0,,, -cSH_cSS_AGG,0,2,0,1,0,3,5,9.62,0,0,,, -cSH_cSS_AGU,0,2,0,1,0,2,2,10,0,0,,, -cSH_cSS_AUA,0,3,0,1,0,2,2,20.2,12.35,0,,, -cSH_cSS_AUC,0,0,0,1,0,1,1,0,0,0,,, -cSH_cSS_AUG,0,3,0,1,1,2,1,20,12.2,0,,, -cSH_cSS_AUU,0,3,0,1,0,0,0,20.83,12.82,0,,, -cSH_cSS_CAA,0,5,0,1,1,1,1,10.1,0,0,,, -cSH_cSS_CAC,1,0,0,1,1,1,3,0,0,0,,, -cSH_cSS_CAG,0,0,0,1,2,4,5,0,0,0,,, -cSH_cSS_CAU,0,1,0,1,1,4,4,0,0,0,,, -cSH_cSS_CCA,1,0,0,1,1,3,5,0,0,52.63,,, -cSH_cSS_CCC,0,6,0,1,1,3,3,62.5,76.92,55.56,,, -cSH_cSS_CCG,0,7,0,1,2,6,8,70.71,86.42,51.28,,, -cSH_cSS_CCU,0,7,0,1,1,4,6,73.68,90.91,57.14,,, -cSH_cSS_CUA,0,0,0,1,0,2,3,0,0,0,,, -cSH_cSS_CUC,0,13,0,1,0,0,0,136.84,116.88,0,,, -cSH_cSS_CUG,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSS_CUU,0,1,0,1,0,1,1,0,0,0,,, -cSH_cSS_GAA,0,1,0,1,1,3,5,9.71,11.76,23.26,,, -cSH_cSS_GAC,0,15,2,1,1,2,2,138.61,108.43,24.39,,, -cSH_cSS_GAG,0,7,0,1,2,3,5,9.71,11.76,22.73,,, -cSH_cSS_GAU,0,1,0,1,1,4,4,10,12.2,25,,, -cSH_cSS_GCA,0,0,0,1,0,3,3,0,0,0,,, -cSH_cSS_GCC,0,0,0,1,0,1,1,0,0,0,,, -cSH_cSS_GCG,0,1,0,1,1,3,3,0,0,0,,, -cSH_cSS_GCU,0,0,0,1,0,3,3,0,0,0,,, -cSH_cSS_GGA,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_GGC,0,14,0,1,1,1,1,127.45,107.14,0,,, -cSH_cSS_GGG,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_GGU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSS_GUA,3,0,0,1,1,1,3,0,0,0,,, -cSH_cSS_GUC,0,14,0,1,1,2,2,142.86,112.5,0,,, -cSH_cSS_GUG,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSS_GUU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSS_UAA,0,5,0,1,1,2,2,10.2,0,0,,, -cSH_cSS_UAC,0,6,0,1,1,2,2,0,0,0,,, -cSH_cSS_UAG,0,5,0,1,2,3,3,10.1,0,0,,, -cSH_cSS_UAU,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_UCA,2,0,3,1,1,1,4,0,0,0,,, -cSH_cSS_UCC,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_UCG,0,1,0,1,2,2,2,0,0,0,,, -cSH_cSS_UCU,0,3,0,1,1,1,1,21.28,13.16,0,,, -cSH_cSS_UUA,0,0,0,1,0,2,2,0,0,0,,, -cSH_cSS_UUC,0,13,0,1,0,0,0,138.3,118.42,0,,, -cSH_cSS_UUG,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSS_UUU,0,1,0,1,0,1,1,0,0,0,,, -cSH_cSW_AAA,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_AAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_AAG,0,2,0,1,1,2,2,19.42,0,0,,, -cSH_cSW_AAU,0,1,0,1,2,4,5,0,0,0,,, -cSH_cSW_ACA,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_ACC,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_ACG,0,0,0,1,3,3,3,0,0,0,,, -cSH_cSW_ACU,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_AGA,0,2,0,1,0,2,2,9.71,0,0,,, -cSH_cSW_AGC,0,2,0,1,1,3,3,9.9,0,0,,, -cSH_cSW_AGG,0,2,0,1,1,3,4,9.62,0,0,,, -cSH_cSW_AGU,0,3,0,1,2,4,4,10.1,0,0,,, -cSH_cSW_AUA,0,3,0,1,1,1,1,20.2,12.35,0,,, -cSH_cSW_AUC,0,3,0,1,1,1,1,20.62,12.66,0,,, -cSH_cSW_AUG,0,1,0,1,2,2,3,10,0,0,,, -cSH_cSW_AUU,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSW_CAA,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_CAC,0,0,0,1,2,4,4,0,0,0,,, -cSH_cSW_CAG,0,2,0,1,1,1,1,19.8,0,0,,, -cSH_cSW_CAU,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_CCA,0,6,0,1,2,2,2,61.22,75,52.63,,, -cSH_cSW_CCC,0,6,0,1,2,2,2,62.5,76.92,55.56,,, -cSH_cSW_CCG,0,6,0,1,3,3,5,60.61,74.07,51.28,,, -cSH_cSW_CCU,0,6,0,1,2,2,2,63.16,77.92,57.14,,, -cSH_cSW_CUA,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSW_CUC,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSW_CUG,0,1,0,1,2,2,3,10.2,0,0,,, -cSH_cSW_CUU,0,3,0,1,1,3,5,31.91,0,0,,, -cSH_cSW_GAA,0,1,0,1,2,4,5,9.8,11.76,23.26,,, -cSH_cSW_GAC,0,1,0,1,2,5,6,10,12.05,24.39,,, -cSH_cSW_GAG,0,4,0,1,1,2,3,29.13,11.63,22.73,,, -cSH_cSW_GAU,0,1,0,1,2,4,5,10.1,12.2,25,,, -cSH_cSW_GCA,0,14,0,1,1,2,2,128.71,108.43,0,,, -cSH_cSW_GCC,0,14,0,1,1,2,2,131.31,111.11,0,,, -cSH_cSW_GCG,0,14,0,1,2,3,3,127.45,107.14,0,,, -cSH_cSW_GCU,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSW_GGA,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSW_GGC,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_GGG,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_GGU,0,1,0,1,3,3,3,10,12.05,0,,, -cSH_cSW_GUA,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_GUC,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_GUG,0,1,0,1,3,3,4,9.9,0,0,,, -cSH_cSW_GUU,0,0,0,1,2,3,4,0,0,0,,, -cSH_cSW_UAA,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_UAG,0,2,0,1,1,2,2,20,0,0,,, -cSH_cSW_UAU,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_UCA,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_UCC,0,0,0,1,2,2,2,0,0,0,,, -cSH_cSW_UCG,0,0,0,1,3,3,3,0,0,0,,, -cSH_cSW_UCU,0,0,0,1,2,3,3,0,0,0,,, -cSH_cSW_UUA,0,0,0,1,1,1,1,0,0,0,,, -cSH_cSW_UUC,0,0,0,1,1,3,3,0,0,0,,, -cSH_cSW_UUG,0,1,0,1,2,2,3,10.31,0,0,,, -cSH_cSW_UUU,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSH_AAA,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSH_AAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSH_AAU,0,2,0,1,1,2,3,20.41,0,0,,, -cSH_tSH_ACA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_ACC,0,1,0,1,2,2,2,10.2,0,0,,, -cSH_tSH_AGA,1,0,0,1,2,4,3,0,0,0,,, -cSH_tSH_AGG,0,2,0,1,1,3,3,9.71,0,0,,, -cSH_tSH_AGU,0,2,0,1,1,3,3,10.1,0,0,,, -cSH_tSH_AUA,0,8,0,1,1,1,1,60.61,61.73,25.64,,, -cSH_tSH_AUC,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSH_CAA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_CAC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_CAU,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSH_CCA,0,6,0,1,2,2,4,61.22,75,52.63,,, -cSH_tSH_CCC,0,6,0,1,2,2,2,62.5,76.92,55.56,,, -cSH_tSH_CUA,0,7,0,1,1,1,1,41.24,50.63,27.03,,, -cSH_tSH_CUC,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSH_GAA,0,1,0,1,2,3,3,9.71,11.76,23.26,,, -cSH_tSH_GAC,0,1,0,1,2,3,4,10,12.05,24.39,,, -cSH_tSH_GAU,0,1,0,1,1,2,3,10.1,12.2,25,,, -cSH_tSH_GCA,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSH_GCC,0,14,0,1,1,2,2,131.31,111.11,0,,, -cSH_tSH_GGA,0,0,0,1,3,3,3,0,0,0,,, -cSH_tSH_GGG,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_GGU,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_GUA,0,5,0,1,2,4,5,40,48.78,25,,, -cSH_tSH_GUC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_UAA,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSH_UAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSH_UCA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_UCC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSH_UUA,0,6,0,1,1,0,2,41.67,51.28,27.78,,, -cSH_tSH_UUC,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSS_AAA,0,2,0,1,1,3,4,19.8,0,0,,, -cSH_tSS_AAC,0,2,0,1,1,3,4,20.2,0,0,,, -cSH_tSS_AAG,0,3,0,1,2,4,5,29.41,11.76,23.26,,, -cSH_tSS_AAU,0,3,0,1,1,3,4,20.41,0,0,,, -cSH_tSS_AGA,3,0,1,1,0,2,2,0,0,0,,, -cSH_tSS_AGC,0,2,0,1,1,3,3,10,0,0,,, -cSH_tSS_AGG,0,2,0,1,2,5,5,9.71,0,0,,, -cSH_tSS_AGU,0,2,0,1,1,4,4,10.1,0,0,,, -cSH_tSS_CAA,0,0,0,1,,,,,,,,, -cSH_tSS_CAC,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSS_CAG,0,1,0,1,,,,,,,,, -cSH_tSS_CAU,0,1,0,1,1,2,2,0,0,0,,, -cSH_tSS_GAA,0,1,0,1,1,3,4,9.8,11.76,23.26,,, -cSH_tSS_GAC,0,1,0,1,1,3,4,10,12.05,24.39,,, -cSH_tSS_GAG,0,2,2,1,2,4,5,19.42,23.26,45.45,,, -cSH_tSS_GAU,0,2,0,1,1,3,4,10.1,12.2,25,,, -cSH_tSS_GGA,0,1,0,1,1,1,1,9.62,0,0,,, -cSH_tSS_GGC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSS_GGG,0,0,0,1,3,5,5,0,0,0,,, -cSH_tSS_GGU,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSS_UAA,0,0,0,1,1,3,3,0,0,0,,, -cSH_tSS_UAC,0,0,2,1,1,3,3,0,0,0,,, -cSH_tSS_UAG,0,1,1,1,2,4,4,10,12.2,25,,, -cSH_tSS_UAU,0,1,0,1,1,3,3,0,0,0,,, -cSH_tSW_AAA,0,2,0,1,2,3,4,19.8,0,0,,, -cSH_tSW_AAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSW_AAU,0,4,0,1,2,3,4,20.62,0,0,,, -cSH_tSW_ACA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_ACC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_ACG,0,0,0,1,3,4,4,0,0,0,,, -cSH_tSW_ACU,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_AGA,0,2,0,1,2,4,4,9.71,0,0,,, -cSH_tSW_AGC,0,2,0,1,2,5,5,10,0,0,,, -cSH_tSW_AGU,0,2,0,1,1,3,3,10.1,0,25,,, -cSH_tSW_AUA,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSW_AUC,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSW_AUG,0,3,0,1,2,2,2,20,12.2,0,,, -cSH_tSW_AUU,0,4,0,1,1,1,1,31.25,38.46,0,,, -cSH_tSW_CAA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_CAC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_CAU,0,2,0,1,2,2,2,10.42,12.66,0,,, -cSH_tSW_CCA,0,6,0,1,2,2,4,61.22,75,52.63,,, -cSH_tSW_CCC,0,7,0,1,2,2,2,73.68,89.74,55.56,,, -cSH_tSW_CCG,0,6,0,1,3,4,4,60.61,74.07,51.28,,, -cSH_tSW_CCU,0,6,0,1,2,2,2,63.16,77.92,57.14,,, -cSH_tSW_CUA,0,3,0,1,1,2,4,30.93,0,0,,, -cSH_tSW_CUC,0,3,0,1,1,0,4,31.58,0,0,,, -cSH_tSW_CUG,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_CUU,0,8,0,1,1,2,4,63.83,39.47,0,,, -cSH_tSW_GAA,0,1,0,1,2,3,4,9.8,11.76,23.26,,, -cSH_tSW_GAC,0,1,0,1,2,3,3,9.9,12.05,24.39,,, -cSH_tSW_GAU,0,1,0,1,2,4,4,10,12.2,25,,, -cSH_tSW_GCA,0,14,0,1,1,2,2,128.71,108.43,0,,, -cSH_tSW_GCC,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSW_GCG,0,1,0,1,2,4,4,0,0,23.81,,, -cSH_tSW_GCU,0,0,0,1,1,2,2,0,0,0,,, -cSH_tSW_GGA,0,0,0,1,3,3,3,0,0,0,,, -cSH_tSW_GGC,0,1,0,1,3,4,4,9.9,11.9,0,,, -cSH_tSW_GGU,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_GUA,0,0,0,1,2,2,3,0,0,0,,, -cSH_tSW_GUC,0,0,0,1,2,2,3,0,0,0,,, -cSH_tSW_GUG,0,0,0,1,3,3,3,0,0,0,,, -cSH_tSW_GUU,0,4,0,1,2,2,3,31.25,37.97,0,,, -cSH_tSW_UAA,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -cSH_tSW_UAU,0,1,0,1,2,4,4,0,0,0,,, -cSH_tSW_UCA,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_UCC,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_UCG,0,0,0,1,3,4,4,0,0,0,,, -cSH_tSW_UCU,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_UUA,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSW_UUC,0,0,0,1,1,1,1,0,0,0,,, -cSH_tSW_UUG,0,0,0,1,2,2,2,0,0,0,,, -cSH_tSW_UUU,0,4,0,1,1,1,1,32.61,40,0,,, -cSW_cHH_AAG,0,13,0,1,2,3,3,19.61,23.81,47.62,,, -cSW_cHH_ACG,0,36,0,1,1,3,3,0,0,0,,, -cSW_cHH_AGA,0,3,0,1,1,2,2,19.42,0,0,,, -cSW_cHH_AGC,0,7,0,1,0,1,1,39.6,12.05,0,,, -cSW_cHH_AGG,0,3,0,1,0,1,2,19.23,0,0,,, -cSW_cHH_CAG,0,0,0,1,3,4,4,0,0,0,,, -cSW_cHH_CCG,0,41,0,1,1,2,2,0,0,0,,, -cSW_cHH_CGA,0,0,1,1,3,4,4,0,0,0,,, -cSW_cHH_CGC,0,5,0,1,2,3,3,51.02,12.35,0,,, -cSW_cHH_CGG,0,1,0,1,2,3,4,9.8,0,0,,, -cSW_cHH_GAG,0,14,0,1,1,3,3,0,0,0,,, -cSW_cHH_GCG,0,37,0,1,1,2,2,0,0,0,,, -cSW_cHH_GGA,0,4,0,1,4,5,5,38.46,46.51,90.91,,, -cSW_cHH_GGC,0,3,0,1,1,2,3,19.61,11.9,0,,, -cSW_cHH_GGG,0,0,0,1,2,3,4,0,0,0,,, -cSW_cHH_UAG,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHH_UCG,0,38,0,1,1,2,2,0,0,0,,, -cSW_cHH_UGA,0,1,0,1,3,3,4,10,0,0,,, -cSW_cHH_UGC,0,3,0,1,2,2,3,20.41,12.5,0,,, -cSW_cHH_UGG,0,1,0,1,2,2,4,9.9,0,0,,, -cSW_cHS_AAA,0,6,0,1,2,4,4,58.82,59.52,119.05,,, -cSW_cHS_AAC,0,1,0,1,2,3,5,0,0,0,,, -cSW_cHS_AAG,0,1,0,1,2,4,4,9.71,11.76,23.26,,, -cSW_cHS_AAU,0,6,3,1,3,5,5,60.61,74.07,153.85,,, -cSW_cHS_ACA,0,6,0,1,2,4,4,10.1,0,0,,, -cSW_cHS_ACC,0,9,0,1,2,4,5,61.86,75,52.63,,, -cSW_cHS_ACG,0,14,0,1,1,4,4,10.1,12.35,25.64,,, -cSW_cHS_ACU,0,3,0,1,2,4,5,0,0,0,,, -cSW_cHS_AGA,0,6,0,1,0,3,3,38.83,0,0,,, -cSW_cHS_AGG,0,4,0,1,1,2,2,28.85,11.63,0,,, -cSW_cHS_AUA,0,5,0,1,1,2,2,40.4,49.38,102.56,,, -cSW_cHS_AUC,0,14,0,1,1,2,2,72.92,0,0,,, -cSW_cHS_AUG,0,4,1,1,2,3,3,0,0,0,,, -cSW_cHS_AUU,0,3,0,1,1,2,2,10.53,0,0,,, -cSW_cHS_CAA,2,4,1,1,2,4,4,30.3,36.59,0,,, -cSW_cHS_CAC,0,0,0,1,2,3,4,0,0,0,,, -cSW_cHS_CAG,0,7,0,1,2,4,5,49.5,12.05,24.39,,, -cSW_cHS_CAU,3,0,4,1,2,4,4,0,0,0,,, -cSW_cHS_CCA,0,11,0,1,2,3,3,0,0,0,,, -cSW_cHS_CCC,2,0,6,1,2,3,5,0,0,55.56,,, -cSW_cHS_CCG,0,3,2,1,1,3,3,20.2,24.69,51.28,,, -cSW_cHS_CCU,0,1,0,1,2,3,3,0,0,0,,, -cSW_cHS_CGA,0,6,0,1,2,5,5,50,0,0,,, -cSW_cHS_CGG,0,0,0,1,3,4,4,0,0,0,,, -cSW_cHS_CUA,0,0,0,1,1,2,2,0,0,0,,, -cSW_cHS_CUC,0,9,0,1,1,2,3,31.91,0,0,,, -cSW_cHS_CUG,0,1,0,1,2,3,3,0,0,0,,, -cSW_cHS_CUU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cHS_GAA,0,12,0,1,1,4,5,0,0,0,,, -cSW_cHS_GAC,0,1,1,1,2,4,6,9.9,12.05,24.39,,, -cSW_cHS_GAG,0,1,0,1,1,4,4,9.62,11.63,22.73,,, -cSW_cHS_GAU,0,5,0,1,2,5,5,0,0,0,,, -cSW_cHS_GCA,0,10,0,1,2,3,3,10,12.05,24.39,,, -cSW_cHS_GCC,0,10,0,1,2,3,3,71.43,74.07,51.28,,, -cSW_cHS_GCG,0,16,0,1,3,2,2,10.1,12.35,25.64,,, -cSW_cHS_GCU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHS_GGA,0,3,0,1,2,5,5,19.23,0,0,,, -cSW_cHS_GGG,0,1,0,1,2,3,3,9.62,0,0,,, -cSW_cHS_GUA,0,4,0,1,4,4,4,40,48.78,100,,, -cSW_cHS_GUC,0,3,0,1,2,2,3,30.61,0,0,,, -cSW_cHS_GUG,0,16,0,1,3,3,4,0,0,0,,, -cSW_cHS_GUU,0,3,0,1,2,2,3,30.93,0,0,,, -cSW_cHS_UAA,0,5,1,1,2,4,5,0,0,0,,, -cSW_cHS_UAC,0,2,0,1,2,3,3,0,0,0,,, -cSW_cHS_UAG,0,1,0,1,2,4,5,10,12.2,25,,, -cSW_cHS_UAU,0,0,4,1,2,4,4,0,0,0,,, -cSW_cHS_UCA,0,3,0,1,2,3,4,20.62,0,0,,, -cSW_cHS_UCC,0,10,0,1,2,3,6,94.74,77.92,57.14,,, -cSW_cHS_UCG,0,13,0,1,2,3,3,10.53,12.99,28.57,,, -cSW_cHS_UCU,0,1,0,1,2,3,4,10.64,0,0,,, -cSW_cHS_UGA,1,0,0,1,2,4,4,0,0,0,,, -cSW_cHS_UGG,0,1,0,1,3,3,4,9.9,0,0,,, -cSW_cHS_UUA,0,0,0,1,1,2,2,0,0,0,,, -cSW_cHS_UUC,0,9,0,1,1,2,3,32.26,0,0,,, -cSW_cHS_UUG,0,1,0,1,2,3,3,0,0,0,,, -cSW_cHS_UUU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cHW_AAG,0,1,0,1,3,4,4,9.71,11.76,23.26,,, -cSW_cHW_AAU,3,0,3,1,3,4,4,0,0,0,,, -cSW_cHW_ACC,0,1,0,1,3,5,5,10.2,12.5,26.32,,, -cSW_cHW_AGA,0,4,0,1,1,2,2,29.13,11.76,23.26,,, -cSW_cHW_AGC,0,3,0,1,1,2,2,19.8,0,0,,, -cSW_cHW_AGG,0,3,0,1,2,3,3,19.23,0,0,,, -cSW_cHW_AGU,0,5,0,1,1,2,3,40,0,0,,, -cSW_cHW_AUA,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_AUC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_AUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_CAG,0,0,0,1,3,4,4,0,0,0,,, -cSW_cHW_CAU,2,1,1,1,3,4,4,10.31,0,0,,, -cSW_cHW_CCC,0,1,0,1,3,4,4,0,0,0,,, -cSW_cHW_CGA,0,1,0,1,3,4,4,9.9,12.05,24.39,,, -cSW_cHW_CGC,0,0,0,1,3,4,5,0,0,0,,, -cSW_cHW_CGG,0,0,0,1,4,5,5,0,0,0,,, -cSW_cHW_CGU,0,5,0,1,3,4,4,51.02,0,0,,, -cSW_cHW_CUA,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_CUC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_CUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_GAG,0,4,0,1,4,6,6,38.46,46.51,90.91,,, -cSW_cHW_GAU,0,1,0,1,3,5,5,10,12.2,25,,, -cSW_cHW_GCC,0,1,0,1,3,4,4,10.1,12.35,25.64,,, -cSW_cHW_GGA,0,1,0,1,2,3,3,9.62,11.63,22.73,,, -cSW_cHW_GGC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_GGG,0,1,0,1,3,4,4,9.52,11.49,22.22,,, -cSW_cHW_GGU,0,4,0,1,2,3,4,39.6,0,0,,, -cSW_cHW_GUA,0,0,0,1,3,3,3,0,0,0,,, -cSW_cHW_GUC,0,0,0,1,3,3,3,0,0,0,,, -cSW_cHW_GUU,0,0,0,1,4,4,4,0,0,0,,, -cSW_cHW_UAG,0,0,1,1,3,4,5,0,0,0,,, -cSW_cHW_UAU,0,2,0,1,3,4,5,10.42,0,0,,, -cSW_cHW_UCC,0,0,0,1,3,4,4,0,0,0,,, -cSW_cHW_UGA,0,2,0,1,3,3,4,20,12.2,25,,, -cSW_cHW_UGC,0,1,0,1,3,3,4,10.2,0,0,,, -cSW_cHW_UGG,0,1,0,1,4,4,5,9.9,0,0,,, -cSW_cHW_UGU,0,1,0,1,3,3,4,10.31,0,0,,, -cSW_cHW_UUA,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_UUC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cHW_UUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSH_AAA,0,4,0,1,2,4,5,29.41,11.9,0,,, -cSW_cSH_AAC,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSH_AAG,0,7,0,1,1,2,2,0,0,0,,, -cSW_cSH_AAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSH_ACA,0,1,0,1,2,2,2,10,0,0,,, -cSW_cSH_ACC,0,10,0,1,2,2,3,30.93,37.97,52.63,,, -cSW_cSH_ACU,0,15,0,1,1,5,5,144.33,113.92,0,,, -cSW_cSH_AGA,0,7,0,1,1,2,3,19.8,23.81,23.26,,, -cSW_cSH_AGC,0,1,0,1,0,1,1,0,0,0,,, -cSW_cSH_AGG,0,5,0,1,1,1,1,9.8,0,0,,, -cSW_cSH_AGU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSH_AUA,0,7,0,1,2,4,4,0,0,0,,, -cSW_cSH_AUC,0,11,0,1,2,4,4,83.33,101.27,0,,, -cSW_cSH_AUU,0,1,0,1,1,2,5,10.42,0,0,,, -cSW_cSH_CAC,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSH_CCA,0,1,0,1,2,4,4,10.2,0,0,,, -cSW_cSH_CCC,0,3,0,1,2,3,3,31.25,38.46,55.56,,, -cSW_cSH_CCU,0,17,0,1,1,3,3,147.37,116.88,0,,, -cSW_cSH_CGA,0,9,0,1,3,6,8,69.31,60.24,24.39,,, -cSW_cSH_CGC,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSH_CGG,0,13,0,1,3,3,3,138.61,107.14,0,,, -cSW_cSH_CGU,0,0,0,1,3,4,4,0,0,0,,, -cSW_cSH_CUA,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSH_CUC,0,3,0,1,2,4,4,21.05,12.99,0,,, -cSW_cSH_CUU,0,1,0,1,1,3,5,10.64,0,0,,, -cSW_cSH_GAA,0,4,0,1,1,4,5,29.13,11.76,0,,, -cSW_cSH_GAC,0,1,0,1,1,3,3,0,0,0,,, -cSW_cSH_GAG,0,7,0,1,0,2,2,0,0,0,,, -cSW_cSH_GAU,0,0,0,1,0,2,2,0,0,0,,, -cSW_cSH_GCA,0,1,0,1,2,2,2,9.9,0,0,,, -cSW_cSH_GCC,0,3,0,1,2,2,2,30.3,37.04,51.28,,, -cSW_cSH_GCU,0,15,0,1,1,3,3,142.86,112.5,0,,, -cSW_cSH_GGA,0,2,0,1,2,5,7,19.23,11.63,22.73,,, -cSW_cSH_GGC,0,1,0,1,1,2,2,0,0,0,,, -cSW_cSH_GGG,0,4,0,1,2,4,7,38.1,0,0,,, -cSW_cSH_GGU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSH_GUA,0,9,0,1,3,5,6,60,73.17,0,,, -cSW_cSH_GUC,0,8,0,1,3,3,3,10.42,12.66,0,,, -cSW_cSH_GUU,0,4,0,1,2,2,2,30.93,25.32,0,,, -cSW_cSH_UAA,0,4,0,1,2,4,5,30.3,12.35,0,,, -cSW_cSH_UAC,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSH_UAG,0,7,0,1,1,3,3,0,0,0,,, -cSW_cSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSH_UCA,0,1,0,1,2,5,5,10.31,0,0,,, -cSW_cSH_UCC,0,3,0,1,2,2,2,31.58,38.96,57.14,,, -cSW_cSH_UCU,0,15,0,1,1,3,3,148.94,118.42,0,,, -cSW_cSH_UGA,0,6,0,1,3,4,6,50,48.78,25,,, -cSW_cSH_UGC,0,1,0,1,2,2,2,0,0,0,,, -cSW_cSH_UGG,0,22,0,1,3,4,5,20,36.14,0,,, -cSW_cSH_UGU,0,0,0,1,3,3,3,0,0,0,,, -cSW_cSH_UUA,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSH_UUC,0,3,0,1,2,4,4,21.28,13.16,0,,, -cSW_cSH_UUU,0,1,0,1,1,3,5,10.75,0,0,,, -cSW_cSS_AAA,0,5,0,1,1,2,2,9.9,0,0,,, -cSW_cSS_AAC,2,0,0,1,1,2,3,0,0,0,,, -cSW_cSS_AAG,0,5,0,1,2,3,3,9.8,0,0,,, -cSW_cSS_AAU,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_ACA,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_ACC,0,0,0,1,1,3,3,0,0,0,,, -cSW_cSS_ACG,0,1,0,1,2,5,5,0,0,0,,, -cSW_cSS_ACU,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_AGA,0,0,0,1,0,3,3,0,0,0,,, -cSW_cSS_AGC,0,3,0,1,0,2,2,19.8,0,0,,, -cSW_cSS_AGG,0,0,0,1,0,2,4,0,0,0,,, -cSW_cSS_AGU,0,0,0,1,0,1,1,0,0,0,,, -cSW_cSS_AUA,0,3,0,1,1,4,4,20.2,12.35,0,,, -cSW_cSS_AUC,0,0,0,1,1,3,3,0,0,0,,, -cSW_cSS_AUG,0,0,0,1,2,6,6,0,0,0,,, -cSW_cSS_AUU,0,3,0,1,1,2,2,20.83,12.82,0,,, -cSW_cSS_CAA,0,5,0,1,1,2,2,10.1,0,0,,, -cSW_cSS_CAC,0,6,0,1,1,2,2,0,0,0,,, -cSW_cSS_CAG,0,5,0,1,2,3,3,10,0,0,,, -cSW_cSS_CAU,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_CCA,0,1,0,1,1,4,4,0,0,0,,, -cSW_cSS_CCC,0,1,0,1,1,2,2,0,0,0,,, -cSW_cSS_CCG,0,3,0,1,2,4,4,0,0,0,,, -cSW_cSS_CCU,0,1,0,1,1,4,4,0,0,0,,, -cSW_cSS_CGA,0,0,0,1,2,5,5,0,0,0,,, -cSW_cSS_CGC,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSS_CGG,0,0,0,1,2,4,6,0,0,0,,, -cSW_cSS_CGU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSS_CUA,0,0,0,1,1,7,7,0,0,0,,, -cSW_cSS_CUC,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_CUG,0,14,0,1,2,5,5,142.86,112.5,0,,, -cSW_cSS_CUU,0,1,0,1,1,5,5,10.64,0,0,,, -cSW_cSS_GAA,0,5,0,1,0,2,2,9.8,0,0,,, -cSW_cSS_GAC,0,6,0,1,0,2,2,0,0,0,,, -cSW_cSS_GAG,0,5,0,1,1,3,3,9.71,0,0,,, -cSW_cSS_GAU,0,0,0,1,0,5,5,0,0,0,,, -cSW_cSS_GCA,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_GCC,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSS_GCG,0,1,0,1,2,4,4,0,0,0,,, -cSW_cSS_GCU,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_GGA,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_GGC,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_GGG,0,0,0,1,1,3,5,0,0,0,,, -cSW_cSS_GGU,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSS_GUA,0,4,0,1,2,4,4,30,24.39,0,,, -cSW_cSS_GUC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSS_GUG,0,0,0,1,3,6,6,0,0,0,,, -cSW_cSS_GUU,0,1,0,1,2,5,5,10.31,12.66,0,,, -cSW_cSS_UAA,0,5,0,1,1,2,2,10.2,0,0,,, -cSW_cSS_UAC,2,0,1,1,1,2,5,0,0,0,,, -cSW_cSS_UAG,1,0,0,1,2,3,5,0,0,0,,, -cSW_cSS_UAU,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_UCA,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_UCC,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSS_UCG,0,1,0,1,2,4,4,0,0,0,,, -cSW_cSS_UCU,0,0,0,1,1,4,4,0,0,0,,, -cSW_cSS_UGA,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSS_UGC,0,6,0,1,2,3,4,10.42,0,0,,, -cSW_cSS_UGG,0,0,0,1,2,3,5,0,0,0,,, -cSW_cSS_UGU,0,0,0,1,2,2,2,0,0,0,,, -cSW_cSS_UUA,0,0,0,1,1,7,7,0,0,0,,, -cSW_cSS_UUC,0,0,0,1,1,5,5,0,0,0,,, -cSW_cSS_UUG,0,1,0,1,2,5,5,0,0,0,,, -cSW_cSS_UUU,0,0,0,1,1,3,3,0,0,0,,, -cSW_cSW_AAA,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_AAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_AAG,0,2,0,1,1,2,2,19.42,0,0,,, -cSW_cSW_AAU,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_ACA,0,14,0,1,2,4,4,130,109.76,0,,, -cSW_cSW_ACC,0,14,0,1,2,4,4,132.65,112.5,0,,, -cSW_cSW_ACG,0,18,0,1,3,4,4,148.51,132.53,0,,, -cSW_cSW_ACU,0,6,0,1,2,3,3,0,0,0,,, -cSW_cSW_AGA,0,3,0,1,0,2,2,19.42,0,0,,, -cSW_cSW_AGC,0,3,0,1,1,3,3,19.8,0,0,,, -cSW_cSW_AGG,0,0,0,1,1,2,2,0,0,0,,, -cSW_cSW_AGU,0,3,0,1,2,3,3,20,0,0,,, -cSW_cSW_AUA,0,0,0,1,2,5,5,0,0,0,,, -cSW_cSW_AUC,0,0,0,1,2,6,6,0,0,0,,, -cSW_cSW_AUG,0,37,0,1,3,3,4,150,85.37,75,,, -cSW_cSW_AUU,0,30,0,1,3,2,2,42.55,26.32,27.78,,, -cSW_cSW_CAA,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_CAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_CAG,0,2,0,1,1,2,2,19.8,0,0,,, -cSW_cSW_CAU,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_CCA,0,16,0,1,2,3,3,132.65,112.5,0,,, -cSW_cSW_CCC,0,11,0,1,2,3,3,135.42,115.38,0,,, -cSW_cSW_CCG,0,14,0,1,3,4,4,131.31,111.11,0,,, -cSW_cSW_CCU,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_CGA,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSW_CGC,0,1,0,1,3,4,4,0,0,0,,, -cSW_cSW_CGG,0,0,0,1,3,4,4,0,0,0,,, -cSW_cSW_CGU,0,1,0,1,4,5,5,0,0,0,,, -cSW_cSW_CUA,0,0,0,1,2,5,5,0,0,0,,, -cSW_cSW_CUC,0,14,0,1,2,5,5,147.37,116.88,0,,, -cSW_cSW_CUG,0,63,0,1,4,6,7,10.42,0,0,,, -cSW_cSW_CUU,0,4,0,1,2,4,4,21.28,26.32,0,,, -cSW_cSW_GAA,0,0,0,1,1,3,3,0,0,0,,, -cSW_cSW_GAC,0,0,0,1,1,3,3,0,0,0,,, -cSW_cSW_GAG,0,2,0,1,0,2,2,19.23,0,0,,, -cSW_cSW_GAU,0,1,0,1,1,4,4,10,12.2,0,,, -cSW_cSW_GCA,0,14,0,1,2,3,3,128.71,108.43,0,,, -cSW_cSW_GCC,0,14,0,1,2,3,3,131.31,111.11,0,,, -cSW_cSW_GCG,0,0,0,1,3,7,7,0,0,0,,, -cSW_cSW_GCU,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_GGA,0,1,0,1,1,2,2,0,0,0,,, -cSW_cSW_GGC,0,1,0,1,2,3,3,0,0,0,,, -cSW_cSW_GGG,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_GGU,0,1,0,1,3,5,5,0,0,0,,, -cSW_cSW_GUA,0,3,0,1,3,4,4,20,12.2,0,,, -cSW_cSW_GUC,0,0,0,1,3,3,3,0,0,0,,, -cSW_cSW_GUG,0,21,0,1,4,4,5,59.41,48.19,24.39,,, -cSW_cSW_GUU,0,41,0,1,3,3,3,51.55,25.32,54.05,,, -cSW_cSW_UAA,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_UAC,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_UAG,0,2,0,1,1,2,2,20,0,0,,, -cSW_cSW_UAU,0,0,0,1,2,4,4,0,0,0,,, -cSW_cSW_UCA,0,14,0,1,2,3,3,134.02,113.92,0,,, -cSW_cSW_UCC,0,14,0,1,2,3,3,136.84,116.88,0,,, -cSW_cSW_UCG,0,14,0,1,3,3,3,132.65,112.5,0,,, -cSW_cSW_UCU,0,0,0,1,2,3,3,0,0,0,,, -cSW_cSW_UGA,0,1,0,1,2,2,2,0,0,0,,, -cSW_cSW_UGC,0,1,0,1,3,3,3,0,0,0,,, -cSW_cSW_UGG,0,0,0,1,3,3,3,0,0,0,,, -cSW_cSW_UGU,0,16,0,1,4,4,5,113.4,126.58,0,,, -cSW_cSW_UUA,0,1,0,1,2,4,4,0,0,0,,, -cSW_cSW_UUC,0,4,0,1,2,5,5,21.28,13.16,0,,, -cSW_cSW_UUG,0,47,0,1,4,5,6,10.53,0,0,,, -cSW_cSW_UUU,0,2,0,1,2,4,4,21.51,26.67,0,,, -cSW_tHH_AAA,0,3,0,1,3,5,5,29.41,35.71,71.43,,, -cSW_tHH_AAC,0,0,0,1,2,3,4,0,0,0,,, -cSW_tHH_AAG,0,5,0,1,2,3,4,48.54,58.82,116.28,,, -cSW_tHH_AAU,0,7,0,1,2,3,3,60.61,74.07,153.85,,, -cSW_tHH_ACA,0,0,0,1,2,5,5,0,0,0,,, -cSW_tHH_ACG,0,2,0,1,2,5,5,9.9,12.05,24.39,,, -cSW_tHH_ACU,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_AGA,0,0,0,1,1,2,2,0,0,0,,, -cSW_tHH_AGC,0,3,0,1,1,3,3,19.8,0,0,,, -cSW_tHH_AGG,0,0,0,1,0,1,1,0,0,0,,, -cSW_tHH_AUA,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_AUC,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_CAA,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHH_CAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHH_CAG,0,0,0,1,2,3,4,0,0,0,,, -cSW_tHH_CAU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHH_CCA,0,1,0,1,2,4,4,0,0,0,,, -cSW_tHH_CCG,0,1,0,1,2,4,5,0,0,0,,, -cSW_tHH_CCU,0,1,0,1,2,4,4,0,0,0,,, -cSW_tHH_CGA,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHH_CGC,0,0,0,1,3,5,5,0,0,0,,, -cSW_tHH_CGG,0,0,0,1,2,2,3,0,0,0,,, -cSW_tHH_CUA,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_CUC,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_GAA,0,7,0,1,2,6,6,0,0,0,,, -cSW_tHH_GAC,0,1,0,1,1,4,4,9.9,12.05,0,,, -cSW_tHH_GAG,0,5,0,1,1,3,3,48.08,58.14,113.64,,, -cSW_tHH_GAU,0,8,0,1,1,4,5,10.2,12.5,26.32,,, -cSW_tHH_GCA,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_GCG,0,4,0,1,2,4,4,29.41,35.71,71.43,,, -cSW_tHH_GCU,0,2,0,1,2,3,3,20.41,25,52.63,,, -cSW_tHH_GGA,0,7,0,1,1,1,1,19.61,23.81,47.62,,, -cSW_tHH_GGC,0,0,0,1,2,3,4,0,0,0,,, -cSW_tHH_GGG,0,11,0,1,1,2,3,104.76,126.44,22.22,,, -cSW_tHH_GUA,0,0,0,1,4,5,5,0,0,0,,, -cSW_tHH_GUC,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHH_UAA,0,0,0,1,3,5,5,0,0,0,,, -cSW_tHH_UAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHH_UAG,0,0,0,1,2,3,4,0,0,0,,, -cSW_tHH_UAU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHH_UCA,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_UCG,0,0,0,1,2,5,6,0,0,0,,, -cSW_tHH_UCU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHH_UGA,0,0,0,1,3,3,3,0,0,0,,, -cSW_tHH_UGC,0,1,0,1,3,4,5,10.2,0,0,,, -cSW_tHH_UGG,0,0,0,1,2,2,2,0,0,0,,, -cSW_tHH_UUA,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHH_UUC,0,0,0,1,2,4,4,0,0,0,,, -cSW_tHS_AAA,0,48,0,1,2,4,6,40.4,49.38,166.67,,, -cSW_tHS_AAC,0,63,0,1,3,5,6,10.1,0,125,,, -cSW_tHS_AAG,0,67,0,1,3,7,8,59.41,24.1,0,,, -cSW_tHS_AAU,0,55,0,1,2,4,4,90.91,98.77,25.64,,, -cSW_tHS_ACA,0,44,0,1,3,4,4,300,207.32,0,,, -cSW_tHS_ACC,0,6,0,1,2,5,5,51.02,50,0,,, -cSW_tHS_ACU,0,3,0,1,2,4,4,20.62,25.32,0,,, -cSW_tHS_AGG,0,3,0,1,1,2,2,19.23,0,0,,, -cSW_tHS_AUA,0,0,0,1,1,3,3,0,0,0,,, -cSW_tHS_AUG,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHS_CAA,0,34,0,1,4,3,3,101.01,111.11,0,,, -cSW_tHS_CAC,0,23,0,1,2,4,5,154.64,164.56,0,,, -cSW_tHS_CAG,0,28,0,1,5,5,5,90,73.17,0,,, -cSW_tHS_CAU,0,56,0,1,4,2,2,260.42,269.23,27.03,,, -cSW_tHS_CCA,0,19,0,1,2,3,3,113.4,139.24,0,,, -cSW_tHS_CCC,0,1,0,1,2,4,4,0,0,0,,, -cSW_tHS_CCU,0,1,0,1,2,4,4,0,0,0,,, -cSW_tHS_CGG,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHS_CUA,0,6,0,1,1,2,2,0,0,0,,, -cSW_tHS_CUG,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHS_GAA,0,43,0,1,1,4,5,108.91,60.24,0,,, -cSW_tHS_GAC,0,23,0,1,1,5,5,50.51,61.73,76.92,,, -cSW_tHS_GAG,0,26,0,1,2,5,5,19.8,12.05,0,,, -cSW_tHS_GAU,0,35,0,1,1,7,7,113.4,139.24,27.03,,, -cSW_tHS_GCA,0,25,0,1,3,6,6,50,60.98,0,,, -cSW_tHS_GCC,0,6,0,1,2,4,4,60.61,74.07,0,,, -cSW_tHS_GCU,0,5,0,1,2,3,3,40.82,50,26.32,,, -cSW_tHS_GGG,0,15,0,1,3,5,5,142.86,172.41,22.22,,, -cSW_tHS_GUA,0,2,0,1,3,4,4,20,24.39,50,,, -cSW_tHS_GUG,0,1,0,1,3,3,3,0,0,0,,, -cSW_tHS_UAA,0,17,0,1,2,3,3,82.47,101.27,0,,, -cSW_tHS_UAC,0,16,0,1,2,4,4,134.02,139.24,0,,, -cSW_tHS_UAG,0,23,0,1,3,5,5,171.72,185.19,0,,, -cSW_tHS_UAU,0,33,0,1,3,6,6,105.26,129.87,27.78,,, -cSW_tHS_UCA,0,18,0,1,3,3,3,31.58,38.96,0,,, -cSW_tHS_UCC,0,2,0,1,2,5,5,10.53,12.99,0,,, -cSW_tHS_UCU,0,1,0,1,2,5,5,10.64,13.16,0,,, -cSW_tHS_UGG,0,1,0,1,3,4,5,9.9,0,0,,, -cSW_tHS_UUA,0,6,0,1,1,2,2,0,0,0,,, -cSW_tHS_UUG,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHW_AAA,0,3,1,1,3,4,4,29.41,35.71,71.43,,, -cSW_tHW_AAC,0,19,0,1,5,5,5,150,134.15,0,,, -cSW_tHW_AAU,23,0,16,1,3,4,5,0,0,0,,, -cSW_tHW_ACC,0,0,0,1,2,4,5,0,0,0,,, -cSW_tHW_AGA,0,3,0,1,1,2,2,19.42,0,0,,, -cSW_tHW_AGC,0,3,0,1,1,2,2,19.8,0,0,,, -cSW_tHW_AGG,0,3,0,1,3,4,4,19.23,0,0,,, -cSW_tHW_AGU,0,4,0,1,1,3,3,30,0,0,,, -cSW_tHW_AUG,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_AUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHW_CAU,3,0,1,1,3,4,4,0,0,0,,, -cSW_tHW_CCC,0,1,0,1,2,3,4,0,0,0,,, -cSW_tHW_CGA,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_CGC,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_CGG,0,0,0,1,5,6,6,0,0,0,,, -cSW_tHW_CGU,0,2,0,1,3,5,5,20.41,0,0,,, -cSW_tHW_CUG,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_CUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHW_GAA,0,6,0,1,2,4,4,0,0,0,,, -cSW_tHW_GAC,0,16,0,1,3,6,6,70.71,86.42,0,,, -cSW_tHW_GAU,0,9,0,1,3,6,6,40,36.59,0,,, -cSW_tHW_GCC,0,13,0,1,3,4,4,141.41,111.11,0,,, -cSW_tHW_GGA,0,4,0,1,3,4,4,28.85,34.88,68.18,,, -cSW_tHW_GGC,0,1,0,1,2,3,3,0,0,0,,, -cSW_tHW_GGG,0,0,0,1,4,5,6,0,0,0,,, -cSW_tHW_GGU,0,1,0,1,2,4,4,9.9,0,0,,, -cSW_tHW_GUG,0,1,0,1,4,4,4,9.9,12.05,24.39,,, -cSW_tHW_GUU,2,0,0,1,4,4,6,0,0,0,,, -cSW_tHW_UAA,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_UAC,1,0,1,1,3,4,7,0,0,0,,, -cSW_tHW_UAU,0,1,2,1,3,4,4,10.42,0,0,,, -cSW_tHW_UCC,0,0,0,1,2,3,3,0,0,0,,, -cSW_tHW_UGA,0,1,1,1,3,3,4,10,0,0,,, -cSW_tHW_UGC,0,1,0,1,3,3,4,10.2,0,0,,, -cSW_tHW_UGG,0,1,0,1,5,5,6,9.9,0,0,,, -cSW_tHW_UGU,0,1,0,1,3,4,5,10.31,0,0,,, -cSW_tHW_UUG,0,0,0,1,3,4,4,0,0,0,,, -cSW_tHW_UUU,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_AAA,3,2,0,1,2,2,3,19.8,23.81,0,,, -cSW_tSH_AAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_AAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_tSH_ACA,0,5,0,1,2,2,2,10.1,0,0,,, -cSW_tSH_ACC,0,20,0,1,2,2,2,144.33,113.92,0,,, -cSW_tSH_AGA,1,0,0,1,2,2,5,0,0,0,,, -cSW_tSH_AGG,0,4,0,1,1,2,2,28.85,0,0,,, -cSW_tSH_AGU,0,5,0,1,1,1,1,0,0,0,,, -cSW_tSH_AUA,0,7,0,1,2,4,4,50.51,49.38,25.64,,, -cSW_tSH_AUC,0,10,0,1,2,4,4,92.78,101.27,0,,, -cSW_tSH_CAA,0,0,0,1,2,2,2,0,0,0,,, -cSW_tSH_CAC,1,0,0,1,2,3,4,0,0,0,,, -cSW_tSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_tSH_CCA,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_CCC,0,14,0,1,2,3,3,135.42,115.38,0,,, -cSW_tSH_CGA,2,0,1,1,4,4,9,0,0,0,,, -cSW_tSH_CGG,0,0,0,1,3,5,5,0,0,0,,, -cSW_tSH_CGU,0,13,0,1,3,3,3,142.86,112.5,0,,, -cSW_tSH_CUA,0,17,0,1,2,5,5,144.33,164.56,27.03,,, -cSW_tSH_CUC,0,17,0,1,2,4,4,157.89,168.83,0,,, -cSW_tSH_GAA,0,0,0,1,1,1,1,0,0,0,,, -cSW_tSH_GAC,0,0,0,1,1,3,3,0,0,0,,, -cSW_tSH_GAU,0,0,0,1,0,2,2,0,0,0,,, -cSW_tSH_GCA,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_GCC,0,14,0,1,2,3,3,131.31,111.11,0,,, -cSW_tSH_GGA,1,0,2,1,3,3,5,0,0,0,,, -cSW_tSH_GGG,0,0,0,1,2,3,4,0,0,0,,, -cSW_tSH_GGU,0,0,0,1,2,2,2,0,0,0,,, -cSW_tSH_GUA,0,9,0,1,3,3,3,50,48.78,25,,, -cSW_tSH_GUC,0,1,0,1,3,4,4,0,0,0,,, -cSW_tSH_UAA,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_UAC,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -cSW_tSH_UCA,0,0,0,1,2,5,5,0,0,0,,, -cSW_tSH_UCC,0,16,0,1,2,4,4,147.37,116.88,0,,, -cSW_tSH_UGA,2,0,0,1,4,4,5,0,0,0,,, -cSW_tSH_UGG,0,6,0,1,3,4,4,59.41,0,0,,, -cSW_tSH_UGU,0,0,0,1,3,3,3,0,0,0,,, -cSW_tSH_UUA,0,11,0,1,2,4,4,83.33,89.74,27.78,,, -cSW_tSH_UUC,0,7,0,1,2,4,4,53.19,52.63,0,,, -cSW_tSW_AAA,0,0,0,1,2,3,3,0,0,0,,, -cSW_tSW_AAC,0,0,0,1,2,3,3,128.71,0,0,,, -cSW_tSW_AAU,0,2,0,1,2,3,3,0,0,0,,, -cSW_tSW_ACA,0,14,0,1,2,4,4,0,109.76,0,,, -cSW_tSW_ACC,0,0,0,1,2,5,5,0,0,0,,, -cSW_tSW_ACG,0,5,0,1,3,4,4,0,0,0,,, -cSW_tSW_ACU,0,6,0,1,2,2,2,9.8,0,0,,, -cSW_tSW_AGA,0,5,0,1,2,2,2,0,0,0,,, -cSW_tSW_AGC,0,5,2,1,2,5,5,0,12.05,0,,, -cSW_tSW_AGU,0,3,0,1,1,1,1,0,36.59,25,,, -cSW_tSW_AUA,0,0,0,1,2,3,3,148.51,0,0,,, -cSW_tSW_AUC,0,0,0,1,2,3,3,123.71,0,0,,, -cSW_tSW_AUG,0,12,0,1,3,3,4,0,12.5,25,,, -cSW_tSW_AUU,0,37,0,1,3,3,3,0,115.38,27.78,,, -cSW_tSW_CAA,0,0,0,1,2,3,3,20.83,0,0,,, -cSW_tSW_CAC,0,0,0,1,2,3,3,134.02,0,0,,, -cSW_tSW_CAU,0,2,0,1,2,3,3,0,0,0,,, -cSW_tSW_CCA,0,16,0,1,2,3,3,0,112.5,0,,, -cSW_tSW_CCC,0,0,0,1,2,3,3,10.64,0,0,,, -cSW_tSW_CCG,0,0,0,1,3,5,5,20,0,0,,, -cSW_tSW_CCU,0,2,0,1,2,3,4,10.31,0,0,,, -cSW_tSW_CGA,0,13,0,1,4,4,4,52.08,108.43,0,,, -cSW_tSW_CGC,0,13,0,1,4,4,4,42.55,111.11,0,,, -cSW_tSW_CGU,0,0,0,1,3,3,3,42.55,0,0,,, -cSW_tSW_CUA,0,19,0,1,2,4,4,33.33,0,0,,, -cSW_tSW_CUC,0,36,0,1,3,4,4,0,51.95,0,,, -cSW_tSW_CUG,0,44,0,1,4,3,4,19.42,115.38,26.32,,, -cSW_tSW_CUU,0,73,0,1,3,5,6,130,82.19,0,,, -cSW_tSW_GAA,0,0,0,1,1,3,3,148.51,0,0,,, -cSW_tSW_GAC,0,0,0,1,1,3,3,9.8,0,0,,, -cSW_tSW_GAU,0,3,0,1,1,4,4,291.26,0,0,,, -cSW_tSW_GCA,0,14,0,1,2,3,3,60.61,108.43,0,,, -cSW_tSW_GCC,0,0,0,1,2,5,5,30,0,0,,, -cSW_tSW_GCG,0,0,0,1,3,5,5,132.65,0,0,,, -cSW_tSW_GCU,0,0,0,1,2,3,3,131.31,0,0,,, -cSW_tSW_GGA,0,0,1,1,3,5,5,10,0,0,,, -cSW_tSW_GGC,0,1,0,1,3,5,5,68.63,11.9,0,,, -cSW_tSW_GGU,0,0,0,1,2,2,2,20.62,0,0,,, -cSW_tSW_GUA,0,0,0,1,3,3,3,51.02,0,0,,, -cSW_tSW_GUC,0,0,0,1,3,3,3,0,0,0,,, -cSW_tSW_GUG,0,16,0,1,4,6,6,19.23,72.29,48.78,,, -cSW_tSW_GUU,0,14,0,1,3,5,5,128.71,151.9,108.11,,, -cSW_tSW_UAA,0,0,0,1,2,3,3,127.45,0,0,,, -cSW_tSW_UAC,0,0,0,1,2,3,3,9.62,0,0,,, -cSW_tSW_UAU,0,2,0,1,2,3,3,0,25.64,0,,, -cSW_tSW_UCA,0,14,0,1,2,3,3,0,113.92,0,,, -cSW_tSW_UCC,0,0,0,1,2,3,3,49.5,0,0,,, -cSW_tSW_UCG,0,0,0,1,3,4,4,0,0,0,,, -cSW_tSW_UCU,0,1,0,1,2,5,5,30,0,0,,, -cSW_tSW_UGA,0,3,1,1,4,4,4,134.02,12.2,0,,, -cSW_tSW_UGU,0,1,0,1,3,3,3,132.65,0,0,,, -cSW_tSW_UUA,0,18,0,1,2,5,5,10,51.28,0,,, -cSW_tSW_UUC,0,42,0,1,4,5,6,0,39.47,0,,, -cSW_tSW_UUG,0,43,0,1,4,1,1,21.05,39.47,0,,, -cSW_tSW_UUU,0,61,0,1,3,5,7,0,41.67,0,,, -cSW_tSS_AAA,0,0,0,1,1,2,3,0,0,0,,, -cSW_tSS_AAG,2,0,0,1,1,5,5,0,23.53,0,,, -cSW_tSS_ACA,0,14,0,1,1,3,3,0,109.76,0,,, -cSW_tSS_ACG,0,18,0,1,2,3,3,130,132.53,0,,, -cSW_tSS_AGA,0,6,0,1,1,2,2,0,11.9,23.26,,, -cSW_tSS_AGG,0,37,0,1,2,4,4,10,352.94,0,,, -cSW_tSS_AUA,0,9,0,1,1,2,2,0,37.04,0,,, -cSW_tSS_AUG,0,7,0,1,2,4,4,9.8,12.2,0,,, -cSW_tSS_CCA,0,16,0,1,1,2,2,29.7,112.5,0,,, -cSW_tSS_CCG,0,16,0,1,2,3,3,30,111.11,0,,, -cSW_tSS_CGA,0,7,0,1,3,3,3,0,12.2,24.39,,, -cSW_tSS_CGG,0,11,0,1,4,7,7,0,83.33,0,,, -cSW_tSS_CUA,0,4,0,1,1,3,3,51.02,12.66,0,,, -cSW_tSS_CUG,0,7,0,1,2,6,6,270.83,37.5,0,,, -cSW_tSS_GAA,0,0,0,1,0,2,3,0,0,0,,, -cSW_tSS_GAG,0,2,0,1,0,4,4,0,23.26,0,,, -cSW_tSS_GCA,0,14,0,1,1,2,2,0,108.43,0,,, -cSW_tSS_GCG,0,14,0,1,2,3,3,132.65,107.14,0,,, -cSW_tSS_GGA,0,2,0,1,2,2,2,0,11.63,22.73,,, -cSW_tSS_GGG,0,5,0,1,3,3,3,0,0,0,,, -cSW_tSS_GUA,0,2,0,1,2,3,4,10.53,0,0,,, -cSW_tSS_GUG,0,7,0,1,3,5,5,138.61,0,0,,, -cSW_tSS_UAA,0,0,0,1,1,3,3,141.41,0,0,,, -cSW_tSS_UAG,0,4,0,1,1,3,3,0,12.2,0,,, -cSW_tSS_UCA,0,14,0,1,1,2,2,0,113.92,0,,, -cSW_tSS_UCG,0,14,0,1,2,3,3,52.63,112.5,0,,, -cSW_tSS_UGA,0,2,0,1,3,4,4,104.17,12.2,25,,, -cSW_tSS_UGG,0,1,0,1,4,5,5,120.88,0,0,,, -cSW_tSS_UUA,0,8,0,1,1,3,3,0,12.99,0,,, -cSW_tSS_UUG,0,1,0,1,2,5,5,0,0,0,,, -cWH_cSH_AGA,0,2,0,1,2,2,2,19.42,23.53,46.51,,, -cWH_cSH_AGC,0,4,0,1,1,1,1,29.7,12.05,24.39,,, -cWH_cSH_AGG,0,20,0,1,2,2,3,9.62,34.88,22.73,,, -cWH_cSH_AGU,0,1,0,1,2,2,2,10,12.2,25,,, -cWH_cSH_AUA,0,3,0,1,2,2,2,20.2,12.35,0,,, -cWH_cSH_AUC,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWH_cSH_AUU,0,3,0,1,1,1,1,20.83,12.82,0,,, -cWH_cSH_CCA,0,1,0,1,2,2,2,10.2,0,0,,, -cWH_cSH_CCC,0,3,0,1,2,2,2,31.25,38.46,55.56,,, -cWH_cSH_CCU,0,15,0,1,1,2,2,147.37,116.88,0,,, -cWH_cSH_CGA,0,1,0,1,2,2,2,9.9,12.05,24.39,,, -cWH_cSH_CGC,0,0,0,1,1,1,1,0,0,0,,, -cWH_cSH_CGG,0,1,0,1,2,2,5,9.8,0,0,,, -cWH_cSH_CGU,0,0,0,1,2,2,5,0,0,0,,, -cWH_cSH_CUA,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWH_cSH_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWH_cSH_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -cWH_cSH_GAA,0,4,0,1,3,4,6,29.13,11.76,0,,, -cWH_cSH_GAC,0,1,0,1,3,3,4,0,0,0,,, -cWH_cSH_GAG,0,7,0,1,2,2,2,0,0,0,,, -cWH_cSH_GAU,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSH_GGA,0,1,0,1,3,3,3,9.62,11.63,22.73,,, -cWH_cSH_GGC,0,1,0,1,2,2,3,0,0,0,,, -cWH_cSH_GGG,0,1,0,1,3,3,5,9.52,0,0,,, -cWH_cSH_GGU,0,0,0,1,3,3,3,0,0,0,,, -cWH_cSH_UAA,0,4,0,1,3,4,5,30.3,12.35,0,,, -cWH_cSH_UAC,0,1,0,1,3,3,4,0,0,0,,, -cWH_cSH_UAG,0,7,0,1,2,2,2,0,0,0,,, -cWH_cSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSH_UGA,0,1,0,1,2,2,2,10,12.2,25,,, -cWH_cSH_UGG,0,1,0,1,2,2,5,9.9,0,0,,, -cWH_cSH_UGU,0,5,0,1,2,2,2,51.55,0,0,,, -cWH_cSH_UUA,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSH_UUC,0,3,0,1,2,2,2,21.28,13.16,0,,, -cWH_cSH_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -cWH_cSS_AGA,0,1,0,1,1,3,3,9.71,11.76,23.26,,, -cWH_cSS_AGC,0,1,0,1,1,2,3,9.9,12.05,24.39,,, -cWH_cSS_AGG,0,1,0,1,1,2,4,9.62,11.63,22.73,,, -cWH_cSS_AGU,0,1,0,1,1,1,1,10,12.2,25,,, -cWH_cSS_AUA,0,3,0,1,1,3,3,20.2,12.35,0,,, -cWH_cSS_AUC,0,0,0,1,1,2,2,0,0,0,,, -cWH_cSS_AUG,0,3,0,1,2,3,3,20,12.2,0,,, -cWH_cSS_AUU,0,3,0,1,1,1,1,20.83,12.82,0,,, -cWH_cSS_CCA,0,0,0,1,1,3,3,0,0,0,,, -cWH_cSS_CCC,0,0,0,1,1,1,1,0,0,0,,, -cWH_cSS_CCG,0,1,0,1,2,3,3,0,0,0,,, -cWH_cSS_CCU,0,0,0,1,1,3,3,0,0,0,,, -cWH_cSS_CGA,0,0,0,1,1,2,2,0,0,0,,, -cWH_cSS_CGC,0,0,0,1,1,2,3,0,0,0,,, -cWH_cSS_CGG,0,2,0,1,1,2,2,9.8,11.9,0,,, -cWH_cSS_CGU,0,1,0,1,1,3,3,10.2,12.5,0,,, -cWH_cSS_CUA,0,3,0,1,1,3,3,20.62,12.66,0,,, -cWH_cSS_CUC,0,0,0,1,1,2,2,0,0,0,,, -cWH_cSS_CUG,0,3,0,1,2,3,3,20.41,12.5,0,,, -cWH_cSS_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -cWH_cSS_GAA,0,5,0,1,2,2,2,9.8,0,0,,, -cWH_cSS_GAC,0,6,0,1,2,2,2,0,0,0,,, -cWH_cSS_GAG,0,5,0,1,3,3,3,9.71,0,0,,, -cWH_cSS_GAU,0,0,0,1,2,4,4,0,0,0,,, -cWH_cSS_GGA,0,0,0,1,2,4,4,0,0,0,,, -cWH_cSS_GGC,0,0,0,1,2,3,3,0,0,0,,, -cWH_cSS_GGG,0,0,0,1,2,3,5,0,0,0,,, -cWH_cSS_GGU,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSS_UAA,1,1,2,1,2,2,6,0,0,0,,, -cWH_cSS_UAC,1,6,0,1,2,2,7,41.24,50.63,0,,, -cWH_cSS_UAG,1,3,0,1,3,3,4,20,24.39,0,,, -cWH_cSS_UAU,0,0,1,1,2,4,4,0,0,0,,, -cWH_cSS_UGA,0,0,0,1,1,2,2,0,0,0,,, -cWH_cSS_UGC,0,14,0,1,1,1,1,132.65,112.5,0,,, -cWH_cSS_UGG,0,0,0,1,1,3,3,0,0,0,,, -cWH_cSS_UGU,0,1,0,1,1,3,3,10.31,12.66,0,,, -cWH_cSS_UUA,0,3,0,1,1,3,3,20.83,12.82,0,,, -cWH_cSS_UUC,0,1,0,1,1,2,2,21.28,26.32,0,,, -cWH_cSS_UUG,0,3,0,1,2,3,3,20.62,12.66,0,,, -cWH_cSS_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -cWH_cSW_AGA,0,4,0,1,1,1,1,29.13,11.76,23.26,,, -cWH_cSW_AGC,0,4,0,1,2,2,2,29.7,12.05,24.39,,, -cWH_cSW_AGG,0,1,0,1,2,2,2,9.62,11.63,22.73,,, -cWH_cSW_AGU,0,35,0,1,3,2,3,10,12.2,25,,, -cWH_cSW_AUA,0,3,0,1,2,2,2,20.2,12.35,0,,, -cWH_cSW_AUC,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWH_cSW_AUG,0,1,0,1,3,3,4,10,0,0,,, -cWH_cSW_AUU,0,0,0,1,2,3,3,0,0,0,,, -cWH_cSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -cWH_cSW_CCC,0,14,0,1,2,2,2,135.42,115.38,0,,, -cWH_cSW_CCG,0,14,0,1,3,3,3,131.31,111.11,0,,, -cWH_cSW_CCU,0,0,0,1,2,3,3,0,0,0,,, -cWH_cSW_CGA,0,0,0,1,1,1,1,0,0,0,,, -cWH_cSW_CGC,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSW_CGG,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSW_CGU,0,1,0,1,3,3,4,10.2,12.5,0,,, -cWH_cSW_CUA,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWH_cSW_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWH_cSW_CUG,0,1,0,1,3,3,4,10.2,0,0,,, -cWH_cSW_CUU,0,0,0,1,2,3,3,0,0,0,,, -cWH_cSW_GAA,0,0,0,1,3,4,4,0,0,0,,, -cWH_cSW_GAC,0,0,0,1,3,4,4,0,0,0,,, -cWH_cSW_GAG,0,2,0,1,2,2,2,19.23,0,0,,, -cWH_cSW_GAU,0,0,0,1,3,4,4,0,0,0,,, -cWH_cSW_GGA,0,1,0,1,2,2,3,0,0,0,,, -cWH_cSW_GGC,0,1,0,1,3,3,4,0,0,0,,, -cWH_cSW_GGG,0,0,0,1,3,3,3,0,0,0,,, -cWH_cSW_GGU,0,1,0,1,4,4,4,0,0,0,,, -cWH_cSW_UAA,0,0,0,1,3,3,3,0,0,0,,, -cWH_cSW_UAC,0,0,0,1,3,4,4,0,0,0,,, -cWH_cSW_UAG,0,2,0,1,2,2,2,20,0,0,,, -cWH_cSW_UAU,0,0,0,1,3,4,4,0,0,0,,, -cWH_cSW_UGA,0,0,0,1,1,1,1,0,0,0,,, -cWH_cSW_UGC,0,0,0,1,2,2,2,0,0,0,,, -cWH_cSW_UGG,0,0,0,1,2,2,3,0,0,0,,, -cWH_cSW_UGU,0,1,0,1,3,3,5,0,0,0,,, -cWH_cSW_UUA,0,3,0,1,2,2,2,20.83,12.82,0,,, -cWH_cSW_UUC,0,0,0,1,2,5,5,0,0,0,,, -cWH_cSW_UUG,0,1,0,1,3,3,4,10.31,0,0,,, -cWH_cSW_UUU,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSH_AGA,0,4,0,1,3,3,3,29.13,11.76,23.26,,, -cWH_tSH_AGG,0,8,0,1,2,2,3,9.71,11.63,22.73,,, -cWH_tSH_AGU,0,8,0,1,2,2,3,40,12.2,25,,, -cWH_tSH_AUA,0,8,0,1,2,2,2,60.61,61.73,25.64,,, -cWH_tSH_AUC,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWH_tSH_CCA,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSH_CCC,0,14,0,1,2,2,2,135.42,115.38,0,,, -cWH_tSH_CGA,0,2,0,1,3,3,4,9.9,0,0,,, -cWH_tSH_CGG,0,0,0,1,2,2,3,0,0,0,,, -cWH_tSH_CGU,0,0,0,1,2,2,3,0,0,0,,, -cWH_tSH_CUA,0,8,0,1,2,2,2,61.86,63.29,27.03,,, -cWH_tSH_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWH_tSH_GAA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSH_GAC,0,1,0,1,3,3,3,9.9,0,0,,, -cWH_tSH_GAU,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSH_GGA,0,1,0,1,4,4,5,0,0,0,,, -cWH_tSH_GGG,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSH_GGU,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSH_UAA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSH_UAC,0,2,0,1,3,3,3,0,0,0,,, -cWH_tSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSH_UGA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSH_UGG,0,0,0,1,2,2,4,0,0,0,,, -cWH_tSH_UGU,0,0,0,1,2,2,4,0,0,0,,, -cWH_tSH_UUA,0,8,0,1,2,2,2,62.5,64.1,27.78,,, -cWH_tSH_UUC,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSS_AGA,0,6,0,1,1,1,1,38.83,11.76,23.26,,, -cWH_tSS_AGC,0,7,0,1,2,2,4,19.8,12.05,24.39,,, -cWH_tSS_AGG,0,34,0,1,3,4,3,9.71,11.63,22.73,,, -cWH_tSS_AGU,0,8,0,1,2,3,4,70,12.2,25,,, -cWH_tSS_CGA,0,1,0,1,1,1,1,9.9,0,0,,, -cWH_tSS_CGC,0,0,0,1,2,2,3,0,0,0,,, -cWH_tSS_CGG,0,0,0,1,3,4,5,0,0,0,,, -cWH_tSS_CGU,0,0,0,1,2,3,4,0,0,0,,, -cWH_tSS_GAA,0,0,0,1,2,3,3,0,0,0,,, -cWH_tSS_GAC,0,0,0,1,2,3,3,0,0,0,,, -cWH_tSS_GAG,1,0,0,1,3,4,5,0,0,22.73,,, -cWH_tSS_GAU,0,1,0,1,2,3,3,0,0,0,,, -cWH_tSS_GGA,2,0,0,1,2,2,4,0,0,0,,, -cWH_tSS_GGC,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSS_GGG,0,0,0,1,4,5,5,0,0,0,,, -cWH_tSS_GGU,0,0,0,1,3,4,4,0,0,0,,, -cWH_tSS_UAA,3,0,0,1,2,3,4,0,0,0,,, -cWH_tSS_UAC,1,3,0,1,2,3,3,20.62,25.32,0,,, -cWH_tSS_UAG,4,0,3,1,3,4,4,0,0,25,,, -cWH_tSS_UAU,0,1,0,1,2,3,3,0,0,0,,, -cWH_tSS_UGA,3,1,1,1,1,1,4,0,0,0,,, -cWH_tSS_UGC,0,0,0,1,,,,,,,,, -cWH_tSS_UGG,0,0,0,1,3,4,6,0,0,0,,, -cWH_tSS_UGU,0,0,0,1,2,3,5,0,0,0,,, -cWH_tSW_AGA,0,25,0,1,3,3,2,9.9,12.05,23.26,,, -cWH_tSW_AGC,0,21,0,1,3,4,4,9.9,48.19,24.39,,, -cWH_tSW_AGU,0,11,0,1,2,2,3,10.1,12.2,25,,, -cWH_tSW_AUA,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_AUC,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_AUG,0,3,0,1,3,3,3,20,12.2,0,,, -cWH_tSW_AUU,0,4,0,1,2,2,2,31.25,38.46,0,,, -cWH_tSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -cWH_tSW_CCC,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_CCG,0,1,0,1,3,4,4,10.1,12.35,0,,, -cWH_tSW_CCU,0,0,0,1,2,3,3,0,0,0,,, -cWH_tSW_CGA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_CGC,0,0,0,1,3,4,5,0,0,0,,, -cWH_tSW_CGU,0,0,0,1,2,2,3,0,0,0,,, -cWH_tSW_CUA,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_CUC,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_CUG,0,3,0,1,3,3,3,20.41,12.5,0,,, -cWH_tSW_CUU,0,4,0,1,2,2,2,31.91,39.47,0,,, -cWH_tSW_GAA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_GAC,0,0,0,1,3,3,4,0,0,0,,, -cWH_tSW_GAU,0,1,0,1,3,4,4,10,12.2,0,,, -cWH_tSW_GGA,2,0,0,1,4,5,6,0,0,0,,, -cWH_tSW_GGC,0,0,0,1,4,5,5,0,0,0,,, -cWH_tSW_GGU,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_UAA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_UAC,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_UAU,0,1,0,1,3,3,3,10.42,12.82,0,,, -cWH_tSW_UGA,0,0,0,1,3,3,3,0,0,0,,, -cWH_tSW_UGC,0,0,0,1,3,4,6,0,0,0,,, -cWH_tSW_UGU,0,0,0,1,2,2,4,0,0,0,,, -cWH_tSW_UUA,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_UUC,0,0,0,1,2,2,2,0,0,0,,, -cWH_tSW_UUG,0,0,0,1,3,5,5,0,0,0,,, -cWH_tSW_UUU,0,4,0,1,2,2,2,32.26,40,0,,, -cWW_cHH_AAG,0,0,0,1,2,2,3,0,0,0,,, -cWW_cHH_ACG,0,37,0,1,1,1,1,0,0,0,,, -cWW_cHH_AGA,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHH_AGC,0,14,0,1,2,2,2,9.9,12.05,0,,, -cWW_cHH_AGG,0,4,0,1,2,2,3,38.46,0,0,,, -cWW_cHH_CAG,0,0,1,1,2,2,2,0,0,0,,, -cWW_cHH_CCG,0,27,0,1,0,0,0,0,0,0,,, -cWW_cHH_CGA,0,2,0,1,5,5,5,29.7,36.14,73.17,,, -cWW_cHH_CGC,0,9,1,1,3,3,3,10.2,12.35,0,,, -cWW_cHH_CGG,2,5,5,1,3,3,4,29.7,23.81,0,,, -cWW_cHH_GAG,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHH_GCG,0,35,0,1,3,3,3,0,0,0,,, -cWW_cHH_UAG,0,0,1,1,3,3,3,0,0,0,,, -cWW_cHH_UCG,0,37,0,1,1,1,1,0,0,0,,, -cWW_cHH_UGA,0,5,0,1,4,4,4,50,60.98,125,,, -cWW_cHH_UGC,1,1,0,1,3,3,2,10.31,12.5,0,,, -cWW_cHH_UGG,0,0,0,1,3,3,4,0,0,0,,, -cWW_cHS_AAA,0,2,0,1,2,3,4,19.61,0,0,,, -cWW_cHS_AAC,0,9,0,1,2,2,4,0,0,0,,, -cWW_cHS_AAG,0,18,0,1,2,3,3,29.7,11.76,23.26,,, -cWW_cHS_AAU,0,1,0,1,2,3,6,10.1,0,0,,, -cWW_cHS_ACA,0,12,0,1,2,2,3,0,0,0,,, -cWW_cHS_ACC,0,18,0,1,2,2,3,82.47,75,52.63,,, -cWW_cHS_ACG,0,0,0,1,1,2,2,0,0,0,,, -cWW_cHS_ACU,0,2,0,1,2,0,2,0,0,0,,, -cWW_cHS_AGA,0,2,0,1,2,4,4,9.8,0,0,,, -cWW_cHS_AGG,0,3,0,1,3,3,3,9.71,0,0,,, -cWW_cHS_AUA,0,4,0,1,4,4,4,30.3,37.04,76.92,,, -cWW_cHS_AUC,0,3,0,1,2,2,2,21.05,0,0,,, -cWW_cHS_AUG,1,0,0,1,3,3,3,0,0,0,,, -cWW_cHS_AUU,0,0,0,1,2,2,2,0,0,0,,, -cWW_cHS_CAA,0,1,0,1,2,3,4,0,0,0,,, -cWW_cHS_CAC,0,0,0,1,2,2,4,0,0,0,,, -cWW_cHS_CAG,0,2,1,1,2,3,3,9.9,12.05,24.39,,, -cWW_cHS_CAU,0,0,0,1,2,3,3,0,0,0,,, -cWW_cHS_CCA,0,1,0,1,1,1,1,0,0,0,,, -cWW_cHS_CCC,0,10,1,1,1,1,1,63.16,76.92,55.56,,, -cWW_cHS_CCG,0,1,0,1,0,1,1,0,0,0,,, -cWW_cHS_CCU,0,3,0,1,1,1,2,0,0,0,,, -cWW_cHS_CGA,20,0,17,1,3,5,4,0,0,0,,, -cWW_cHS_CGG,10,0,3,1,4,4,4,0,0,0,,, -cWW_cHS_CUA,0,14,0,1,0,0,1,0,0,0,,, -cWW_cHS_CUC,0,1,1,1,1,1,2,10.53,0,0,,, -cWW_cHS_CUG,0,7,0,1,2,2,5,61.22,0,0,,, -cWW_cHS_CUU,0,4,0,1,1,1,3,42.55,0,0,,, -cWW_cHS_GAA,0,6,0,1,3,4,5,0,0,0,,, -cWW_cHS_GAC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHS_GAG,0,8,0,1,3,4,5,76.92,11.63,22.73,,, -cWW_cHS_GAU,0,0,0,1,3,4,4,0,0,0,,, -cWW_cHS_GCA,9,0,18,1,4,4,4,0,0,0,,, -cWW_cHS_GCC,9,0,6,1,4,4,4,0,0,51.28,,, -cWW_cHS_GCG,1,0,12,1,4,5,7,0,0,0,,, -cWW_cHS_GCU,14,1,11,1,4,4,4,0,0,0,,, -cWW_cHS_GUA,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHS_GUC,0,3,0,1,3,3,3,52.08,0,0,,, -cWW_cHS_GUG,0,2,1,1,4,4,4,0,0,0,,, -cWW_cHS_GUU,0,1,0,1,3,3,3,0,0,0,,, -cWW_cHS_UAA,9,2,6,1,3,4,6,20.41,0,0,,, -cWW_cHS_UAC,0,0,1,1,3,3,3,0,0,0,,, -cWW_cHS_UAG,0,7,0,1,3,4,5,70,12.2,25,,, -cWW_cHS_UAU,1,0,0,1,3,4,3,0,0,0,,, -cWW_cHS_UCA,0,9,0,1,2,2,3,0,0,0,,, -cWW_cHS_UCC,0,16,0,1,2,2,2,157.89,77.92,57.14,,, -cWW_cHS_UCG,0,2,0,1,1,2,2,20.41,25,52.63,,, -cWW_cHS_UCU,1,0,0,1,2,2,3,0,0,0,,, -cWW_cHS_UGA,0,2,1,1,3,5,6,10,0,0,,, -cWW_cHS_UGG,3,0,3,1,5,5,4,0,0,0,,, -cWW_cHS_UUA,0,0,0,1,2,2,2,0,0,0,,, -cWW_cHS_UUC,0,4,0,1,2,2,2,43.48,0,0,,, -cWW_cHS_UUG,6,1,0,1,3,3,6,0,0,0,,, -cWW_cHS_UUU,1,0,0,1,2,2,2,0,0,0,,, -cWW_cHW_AAG,0,1,0,1,3,3,4,9.71,0,0,,, -cWW_cHW_AAU,0,1,1,1,3,3,4,10.1,0,0,,, -cWW_cHW_ACC,0,0,0,1,2,2,2,0,0,0,,, -cWW_cHW_AGA,0,1,0,1,3,3,3,9.71,11.76,23.26,,, -cWW_cHW_AGC,0,0,0,1,3,3,4,0,0,0,,, -cWW_cHW_AGG,4,1,0,1,5,5,5,9.62,11.63,0,,, -cWW_cHW_AGU,0,14,0,1,3,3,3,130,0,0,,, -cWW_cHW_AUA,0,0,1,1,3,3,3,0,0,0,,, -cWW_cHW_AUC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_AUU,1,2,0,1,4,4,4,0,0,0,,, -cWW_cHW_CAG,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_CAU,1,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_CCC,0,1,1,1,1,1,1,0,0,0,,, -cWW_cHW_CGA,0,1,0,1,4,4,4,9.9,12.05,24.39,,, -cWW_cHW_CGC,2,0,1,1,4,4,3,0,0,0,,, -cWW_cHW_CGG,31,1,3,1,6,6,6,9.8,11.9,0,,, -cWW_cHW_CGU,6,0,4,1,4,4,6,0,0,0,,, -cWW_cHW_CUA,0,0,0,1,2,2,2,0,0,0,,, -cWW_cHW_CUC,0,0,0,1,2,0,2,0,0,0,,, -cWW_cHW_CUU,0,3,0,1,2,0,2,31.91,39.47,88.24,,, -cWW_cHW_GAG,0,0,0,1,4,4,5,0,0,0,,, -cWW_cHW_GAU,1,1,0,1,4,4,6,0,0,0,,, -cWW_cHW_GCC,5,0,5,1,4,4,6,0,0,0,,, -cWW_cHW_GUA,0,0,0,1,4,4,4,0,0,0,,, -cWW_cHW_GUC,0,0,0,1,4,4,4,0,0,0,,, -cWW_cHW_GUU,0,0,1,1,4,4,4,0,0,0,,, -cWW_cHW_UAG,0,0,0,1,4,4,5,0,0,0,,, -cWW_cHW_UAU,16,0,2,1,4,4,5,0,0,0,,, -cWW_cHW_UCC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_UGA,0,1,0,1,4,4,4,10,12.2,25,,, -cWW_cHW_UGC,0,0,0,1,5,5,5,0,0,0,,, -cWW_cHW_UGG,0,1,0,1,5,5,5,0,0,0,,, -cWW_cHW_UGU,0,1,3,1,4,4,5,0,0,0,,, -cWW_cHW_UUA,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_UUC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cHW_UUU,0,0,0,1,3,3,3,0,0,0,,, -cWW_cSH_AAA,0,4,0,1,2,3,5,29.41,11.9,0,,, -cWW_cSH_AAC,0,1,0,1,2,2,3,0,0,0,,, -cWW_cSH_AAG,0,7,1,1,1,1,2,0,0,0,,, -cWW_cSH_AAU,0,0,0,1,1,1,2,0,0,0,,, -cWW_cSH_ACA,0,3,0,1,3,4,4,30,24.39,50,,, -cWW_cSH_ACC,0,19,0,1,1,1,1,31.25,38.46,55.56,,, -cWW_cSH_ACU,0,18,0,1,1,2,2,164.95,139.24,54.05,,, -cWW_cSH_AGA,0,1,0,1,3,3,3,9.71,11.76,23.26,,, -cWW_cSH_AGC,0,1,0,1,2,2,2,0,0,0,,, -cWW_cSH_AGG,0,1,0,1,3,3,4,9.62,0,0,,, -cWW_cSH_AGU,0,0,0,1,3,3,3,0,0,0,,, -cWW_cSH_AUA,3,0,4,1,3,3,4,0,0,0,,, -cWW_cSH_AUC,9,0,5,1,3,3,3,0,0,0,,, -cWW_cSH_AUU,0,3,0,1,2,2,2,20.83,12.82,0,,, -cWW_cSH_CAA,1,4,1,1,2,3,5,10.1,0,0,,, -cWW_cSH_CAC,0,1,0,1,2,2,2,0,0,0,,, -cWW_cSH_CAG,0,7,0,1,1,1,1,0,0,0,,, -cWW_cSH_CAU,0,0,0,1,1,1,1,0,0,0,,, -cWW_cSH_CCA,0,3,2,1,2,4,5,20.41,12.5,0,,, -cWW_cSH_CCC,0,5,0,1,2,2,2,41.67,51.28,83.33,,, -cWW_cSH_CCU,0,17,0,1,0,1,1,147.37,116.88,0,,, -cWW_cSH_CGA,4,6,7,1,5,5,6,40,24.1,48.78,,, -cWW_cSH_CGC,0,1,3,1,3,3,3,0,0,0,,, -cWW_cSH_CGG,4,0,3,1,4,4,4,0,0,0,,, -cWW_cSH_CGU,12,0,5,1,4,4,5,0,0,0,,, -cWW_cSH_CUA,0,3,0,1,2,2,2,20.62,12.66,0,,, -cWW_cSH_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWW_cSH_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -cWW_cSH_GAA,0,4,0,1,3,4,5,29.13,11.76,0,,, -cWW_cSH_GAC,0,1,0,1,3,3,3,0,0,0,,, -cWW_cSH_GAG,0,7,0,1,3,3,3,0,0,0,,, -cWW_cSH_GAU,0,0,0,1,2,2,2,0,0,0,,, -cWW_cSH_GCA,0,1,13,1,4,5,5,9.9,0,0,,, -cWW_cSH_GCC,1,0,4,1,2,2,3,0,0,57.14,,, -cWW_cSH_GCU,1,0,3,1,4,5,6,0,0,0,,, -cWW_cSH_GUA,0,8,1,1,4,4,4,40,36.59,50,,, -cWW_cSH_GUC,0,11,0,1,2,2,2,81.63,87.5,157.89,,, -cWW_cSH_GUU,0,7,0,1,2,2,2,21.05,12.99,0,,, -cWW_cSH_UAA,1,0,5,1,3,4,4,0,0,0,,, -cWW_cSH_UAC,0,1,0,1,3,3,3,0,0,0,,, -cWW_cSH_UAG,1,0,0,1,2,2,4,0,0,0,,, -cWW_cSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -cWW_cSH_UCA,0,1,0,1,2,2,2,10.31,0,0,,, -cWW_cSH_UCC,0,3,1,1,2,2,2,31.58,38.96,57.14,,, -cWW_cSH_UCU,0,15,0,1,1,2,2,148.94,118.42,0,,, -cWW_cSH_UGA,0,1,1,1,4,4,4,10,12.2,25,,, -cWW_cSH_UGG,0,2,0,1,4,5,7,19.8,0,0,,, -cWW_cSH_UGU,0,0,2,1,4,4,4,0,0,0,,, -cWW_cSH_UUA,0,3,0,1,4,4,4,20.83,12.82,0,,, -cWW_cSH_UUC,1,4,0,1,3,3,4,32.26,13.16,88.24,,, -cWW_cSH_UUU,0,7,0,1,2,2,2,21.51,13.33,0,,, -cWW_cSS_AAA,0,5,0,1,1,1,2,9.9,0,0,,, -cWW_cSS_AAC,0,6,0,1,1,1,2,0,0,0,,, -cWW_cSS_AAG,0,5,0,1,2,2,3,9.8,0,0,,, -cWW_cSS_AAU,0,1,0,1,1,2,3,0,0,0,,, -cWW_cSS_ACA,0,1,1,1,1,3,3,0,0,0,,, -cWW_cSS_ACC,0,0,0,1,1,1,1,0,0,0,,, -cWW_cSS_ACG,0,2,0,1,3,4,4,9.9,12.05,24.39,,, -cWW_cSS_ACU,0,0,0,1,1,3,3,0,0,0,,, -cWW_cSS_AGA,1,1,0,1,2,4,7,9.71,11.76,0,,, -cWW_cSS_AGC,0,0,0,1,2,3,3,0,0,0,,, -cWW_cSS_AGG,0,0,0,1,2,3,5,0,0,0,,, -cWW_cSS_AGU,0,0,0,1,2,2,2,0,0,0,,, -cWW_cSS_AUA,24,0,18,1,2,4,4,0,0,0,,, -cWW_cSS_AUC,1,0,3,1,2,2,4,0,0,0,,, -cWW_cSS_AUG,23,0,3,1,3,4,6,0,0,0,,, -cWW_cSS_AUU,0,3,3,1,2,2,2,20.83,12.82,0,,, -cWW_cSS_CAA,0,5,0,1,1,1,1,10.1,0,0,,, -cWW_cSS_CAC,0,6,0,1,1,1,1,0,0,0,,, -cWW_cSS_CAG,0,5,0,1,2,2,2,10,0,0,,, -cWW_cSS_CAU,0,0,0,1,1,4,4,0,0,0,,, -cWW_cSS_CCA,0,1,0,1,0,2,2,0,0,0,,, -cWW_cSS_CCC,0,1,0,1,0,0,0,0,0,0,,, -cWW_cSS_CCG,0,3,0,1,1,2,2,0,0,0,,, -cWW_cSS_CCU,0,1,0,1,0,2,2,0,0,0,,, -cWW_cSS_CGA,125,0,36,1,3,5,5,0,0,0,,, -cWW_cSS_CGC,10,0,1,1,3,4,7,0,0,0,,, -cWW_cSS_CGG,4,0,3,1,3,4,6,0,0,0,,, -cWW_cSS_CGU,13,0,0,1,3,3,7,0,0,0,,, -cWW_cSS_CUA,0,3,1,1,1,3,3,20.62,12.66,0,,, -cWW_cSS_CUC,0,0,0,1,1,3,3,0,0,0,,, -cWW_cSS_CUG,0,3,0,1,2,3,3,20.41,12.5,0,,, -cWW_cSS_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -cWW_cSS_GAA,2,0,0,1,2,2,5,0,0,0,,, -cWW_cSS_GAC,4,1,0,1,2,2,6,0,0,0,,, -cWW_cSS_GAG,0,5,0,1,3,3,3,9.71,0,0,,, -cWW_cSS_GAU,0,0,0,1,2,4,4,0,0,0,,, -cWW_cSS_GCA,345,0,30,1,3,5,9,0,0,0,,, -cWW_cSS_GCC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cSS_GCG,20,0,1,1,4,5,7,9.8,11.9,0,,, -cWW_cSS_GCU,5,0,0,1,3,5,5,0,0,0,,, -cWW_cSS_GUA,4,0,3,1,4,6,6,0,0,75,,, -cWW_cSS_GUC,0,0,0,1,5,6,6,0,0,0,,, -cWW_cSS_GUG,0,13,0,1,3,4,4,69.31,72.29,121.95,,, -cWW_cSS_GUU,0,5,0,1,4,4,4,20.62,12.66,0,,, -cWW_cSS_UAA,21,0,4,1,2,2,5,0,0,0,,, -cWW_cSS_UAC,1,0,0,1,2,2,5,0,0,0,,, -cWW_cSS_UAG,1,0,1,1,3,3,6,0,0,0,,, -cWW_cSS_UAU,2,1,2,1,2,5,6,10.42,0,0,,, -cWW_cSS_UCA,0,0,1,1,1,3,3,0,0,0,,, -cWW_cSS_UCC,0,0,0,1,1,2,2,0,0,0,,, -cWW_cSS_UCG,0,1,0,1,2,3,3,0,0,0,,, -cWW_cSS_UCU,0,0,0,1,1,3,3,0,0,0,,, -cWW_cSS_UGA,4,2,4,1,3,5,6,10,0,0,,, -cWW_cSS_UGC,1,0,0,1,3,5,5,0,0,0,,, -cWW_cSS_UGG,2,0,2,1,3,4,9,0,0,0,,, -cWW_cSS_UGU,4,1,0,1,3,3,4,0,0,0,,, -cWW_cSS_UUA,2,0,2,1,2,4,5,0,0,0,,, -cWW_cSS_UUC,0,3,0,1,2,4,4,21.28,13.16,0,,, -cWW_cSS_UUG,3,1,0,1,5,6,6,0,0,27.03,,, -cWW_cSS_UUU,0,3,0,1,3,3,3,21.51,13.33,0,,, -cWW_cSW_AAA,0,0,0,1,2,2,3,0,0,0,,, -cWW_cSW_AAC,0,0,0,1,2,2,3,0,0,0,,, -cWW_cSW_AAG,0,2,0,1,1,1,2,19.42,0,0,,, -cWW_cSW_AAU,0,0,0,1,2,3,4,0,0,0,,, -cWW_cSW_ACA,0,19,1,1,4,4,4,160,146.34,75,,, -cWW_cSW_ACC,0,2,0,1,3,4,4,20.41,25,52.63,,, -cWW_cSW_ACG,0,33,0,1,2,2,2,306.93,325.3,390.24,,, -cWW_cSW_ACU,0,16,0,1,1,2,2,164.95,202.53,432.43,,, -cWW_cSW_AGA,0,1,0,1,2,2,2,0,0,0,,, -cWW_cSW_AGC,0,1,0,1,3,3,3,0,0,0,,, -cWW_cSW_AGG,0,0,0,1,3,3,3,0,0,0,,, -cWW_cSW_AGU,0,1,0,1,4,4,4,10,12.2,0,,, -cWW_cSW_AUA,12,0,12,1,3,3,4,0,0,0,,, -cWW_cSW_AUC,8,0,2,1,3,3,4,0,0,0,,, -cWW_cSW_AUG,1,0,0,1,4,4,4,0,0,0,,, -cWW_cSW_AUU,1,0,0,1,3,4,3,0,0,55.56,,, -cWW_cSW_CAA,0,0,0,1,2,2,2,0,0,0,,, -cWW_cSW_CAC,0,0,0,1,2,2,2,0,0,0,,, -cWW_cSW_CAG,0,2,0,1,1,1,1,19.8,0,0,,, -cWW_cSW_CAU,0,0,0,1,2,3,3,0,0,0,,, -cWW_cSW_CCA,0,16,0,1,1,1,1,132.65,112.5,0,,, -cWW_cSW_CCC,0,16,0,1,1,1,1,135.42,115.38,0,,, -cWW_cSW_CCG,0,5,0,1,3,3,3,40.4,49.38,25.64,,, -cWW_cSW_CCU,0,3,0,1,2,2,2,31.58,38.96,28.57,,, -cWW_cSW_CGA,3,5,5,1,3,3,4,19.8,24.1,0,,, -cWW_cSW_CGC,4,0,2,1,4,4,6,0,0,0,,, -cWW_cSW_CGG,4,0,2,1,4,4,6,0,0,0,,, -cWW_cSW_CGU,1,5,2,1,5,5,8,41.24,50,0,,, -cWW_cSW_CUA,2,0,2,1,2,2,6,0,0,0,,, -cWW_cSW_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWW_cSW_CUG,0,5,0,1,3,3,4,30.61,12.5,0,,, -cWW_cSW_CUU,0,0,0,1,2,3,3,0,0,0,,, -cWW_cSW_GAA,0,0,1,1,3,3,3,0,0,0,,, -cWW_cSW_GAC,0,0,0,1,3,3,3,0,0,0,,, -cWW_cSW_GAG,0,2,0,1,3,3,3,19.23,0,0,,, -cWW_cSW_GAU,0,0,0,1,4,5,5,0,0,0,,, -cWW_cSW_GCA,49,0,16,1,4,4,5,0,0,0,,, -cWW_cSW_GCC,5,1,12,1,4,4,5,0,0,0,,, -cWW_cSW_GCG,0,21,0,1,5,5,5,186.27,178.57,142.86,,, -cWW_cSW_GCU,2,0,0,1,4,5,5,0,0,157.89,,, -cWW_cSW_GUA,0,13,0,1,3,3,3,80,85.37,150,,, -cWW_cSW_GUC,0,10,0,1,3,3,3,61.22,62.5,105.26,,, -cWW_cSW_GUG,0,36,0,1,6,5,6,10.42,0,0,,, -cWW_cSW_GUU,0,14,0,1,2,3,3,144.33,177.22,378.38,,, -cWW_cSW_UAA,7,0,10,1,3,3,4,0,0,0,,, -cWW_cSW_UAC,7,0,2,1,3,3,5,0,0,0,,, -cWW_cSW_UAG,0,2,1,1,2,2,2,20,0,0,,, -cWW_cSW_UAU,4,0,1,1,3,4,4,0,0,0,,, -cWW_cSW_UCA,0,14,0,1,2,2,2,134.02,113.92,0,,, -cWW_cSW_UCC,0,14,0,1,2,2,2,136.84,116.88,0,,, -cWW_cSW_UCG,0,14,1,1,3,3,3,132.65,112.5,0,,, -cWW_cSW_UCU,0,0,0,1,2,3,3,0,0,0,,, -cWW_cSW_UGA,0,1,0,1,3,3,3,0,0,0,,, -cWW_cSW_UGC,0,1,0,1,4,4,4,0,0,0,,, -cWW_cSW_UGG,0,0,0,1,4,4,4,0,0,0,,, -cWW_cSW_UGU,0,1,0,1,5,5,5,10.31,12.66,0,,, -cWW_cSW_UUA,0,5,0,1,4,5,5,31.25,25.64,27.78,,, -cWW_cSW_UUC,0,5,0,1,4,4,4,31.91,26.32,29.41,,, -cWW_cSW_UUG,0,58,0,1,4,6,7,10.53,0,0,,, -cWW_cSW_UUU,0,11,0,1,3,5,6,118.28,146.67,333.33,,, -cWW_tHH_AAA,0,0,0,1,3,4,5,0,0,0,,, -cWW_tHH_AAC,0,1,0,1,2,2,4,10,0,0,,, -cWW_tHH_AAG,0,0,0,1,2,2,3,0,0,0,,, -cWW_tHH_AAU,0,0,0,1,2,3,4,0,0,0,,, -cWW_tHH_ACA,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHH_ACG,0,0,0,1,2,3,4,0,0,0,,, -cWW_tHH_ACU,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHH_AGA,0,2,0,1,4,4,4,19.42,23.53,46.51,,, -cWW_tHH_AGC,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHH_AGG,0,0,0,1,2,2,3,0,0,0,,, -cWW_tHH_AUA,1,0,2,1,4,4,4,0,0,0,,, -cWW_tHH_AUC,0,0,1,1,3,4,4,0,0,0,,, -cWW_tHH_CAA,0,1,0,1,3,4,4,0,0,0,,, -cWW_tHH_CAC,0,0,0,1,2,2,2,0,0,0,,, -cWW_tHH_CAG,0,0,0,1,3,3,4,0,0,0,,, -cWW_tHH_CAU,0,1,0,1,2,2,2,10.31,12.66,27.03,,, -cWW_tHH_CCA,0,1,0,1,1,2,2,0,0,0,,, -cWW_tHH_CCG,0,1,1,1,1,2,2,0,0,0,,, -cWW_tHH_CCU,0,1,1,1,1,2,2,0,0,0,,, -cWW_tHH_CGA,0,2,2,1,5,5,5,19.8,24.1,48.78,,, -cWW_tHH_CGC,7,1,1,1,4,4,5,10.1,12.35,0,,, -cWW_tHH_CGG,0,1,3,1,3,3,4,0,0,0,,, -cWW_tHH_CUA,0,7,0,1,2,3,3,31.25,38.46,83.33,,, -cWW_tHH_CUC,0,2,0,1,2,3,3,21.05,25.97,57.14,,, -cWW_tHH_GAA,0,0,0,1,4,5,5,0,0,0,,, -cWW_tHH_GAC,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHH_GAG,0,0,1,1,3,3,3,0,0,0,,, -cWW_tHH_GAU,0,0,0,1,3,4,4,0,0,0,,, -cWW_tHH_GCA,1,0,2,1,4,5,6,0,0,0,,, -cWW_tHH_GCG,7,1,1,1,4,5,4,0,0,0,,, -cWW_tHH_GCU,3,1,1,1,4,5,5,0,0,0,,, -cWW_tHH_GUA,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHH_GUC,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHH_UAA,17,0,3,1,4,5,5,0,0,0,,, -cWW_tHH_UAC,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHH_UAG,0,0,1,1,3,3,3,0,0,0,,, -cWW_tHH_UAU,0,0,0,1,3,4,4,0,0,0,,, -cWW_tHH_UCA,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHH_UCG,0,0,0,1,2,3,4,0,0,0,,, -cWW_tHH_UCU,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHH_UGA,0,12,0,1,4,4,4,0,0,0,,, -cWW_tHH_UGC,0,0,0,1,4,4,5,0,0,0,,, -cWW_tHH_UGG,0,10,0,1,4,3,4,89.11,108.43,48.78,,, -cWW_tHH_UUA,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHH_UUC,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHS_AAA,0,0,0,1,2,2,3,0,0,0,,, -cWW_tHS_AAC,0,0,0,1,2,3,4,0,0,0,,, -cWW_tHS_AAG,0,0,0,1,3,3,4,0,0,0,,, -cWW_tHS_AAU,0,5,0,1,2,4,5,40.4,49.38,25.64,,, -cWW_tHS_ACA,0,0,0,1,2,2,2,0,0,0,,, -cWW_tHS_ACC,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHS_ACU,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHS_AGG,0,1,1,1,3,3,3,0,0,0,,, -cWW_tHS_AUA,6,1,9,1,3,3,3,0,0,0,,, -cWW_tHS_AUG,6,3,2,1,3,3,5,10,12.2,0,,, -cWW_tHS_CAG,0,12,0,1,3,2,2,10.2,12.5,0,,, -cWW_tHS_CAU,0,43,0,1,2,1,2,64.52,66.67,54.05,,, -cWW_tHS_CCA,0,1,1,1,1,1,1,0,0,0,,, -cWW_tHS_CCC,0,1,0,1,1,2,2,0,0,0,,, -cWW_tHS_CCU,0,1,0,1,1,2,2,0,0,0,,, -cWW_tHS_CGG,10,4,1,1,4,4,4,29.41,35.71,0,,, -cWW_tHS_CUA,0,9,0,1,1,1,1,10.53,12.99,28.57,,, -cWW_tHS_CUG,0,9,0,1,3,3,3,102.04,125,52.63,,, -cWW_tHS_GAA,0,5,0,1,3,3,3,9.8,0,0,,, -cWW_tHS_GAC,0,13,0,1,3,5,5,138.61,108.43,0,,, -cWW_tHS_GAG,0,0,0,1,4,6,6,0,0,0,,, -cWW_tHS_GAU,0,10,0,1,3,5,5,80,85.37,25,,, -cWW_tHS_GCA,0,5,5,1,4,4,4,10,0,0,,, -cWW_tHS_GCC,1,0,3,1,4,5,5,0,0,0,,, -cWW_tHS_GCU,0,0,4,1,4,4,4,0,0,0,,, -cWW_tHS_GUA,4,1,0,1,3,3,4,10,0,0,,, -cWW_tHS_GUG,0,0,2,1,4,4,4,0,0,0,,, -cWW_tHS_UAA,0,5,1,1,3,3,3,10.2,0,0,,, -cWW_tHS_UAC,0,13,1,1,3,4,4,144.33,113.92,0,,, -cWW_tHS_UAG,3,0,3,1,4,5,6,0,0,0,,, -cWW_tHS_UAU,2,0,4,1,3,5,4,0,0,27.78,,, -cWW_tHS_UCA,0,13,0,1,2,2,2,134.02,164.56,0,,, -cWW_tHS_UCC,1,0,0,1,2,4,6,0,0,0,,, -cWW_tHS_UCU,0,0,0,1,2,3,3,0,0,0,,, -cWW_tHS_UGG,0,7,1,1,5,5,6,59.41,72.29,24.39,,, -cWW_tHS_UUA,0,0,0,1,2,2,2,0,0,0,,, -cWW_tHS_UUG,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHW_AAA,0,0,0,1,3,3,5,0,0,0,,, -cWW_tHW_AAC,0,0,0,1,3,3,5,0,0,0,,, -cWW_tHW_AAU,0,2,1,1,3,3,4,20.2,0,0,,, -cWW_tHW_ACC,0,1,0,1,2,2,3,10.2,0,0,,, -cWW_tHW_AGA,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHW_AGC,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_AGG,0,0,0,1,5,5,6,0,0,0,,, -cWW_tHW_AGU,0,4,0,1,3,4,4,0,0,0,,, -cWW_tHW_AUG,1,0,2,1,4,4,4,0,0,0,,, -cWW_tHW_AUU,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHW_CAA,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHW_CAC,3,1,2,1,4,4,5,10.2,12.5,26.32,,, -cWW_tHW_CAU,0,0,0,1,3,3,3,0,0,0,,, -cWW_tHW_CCC,0,1,0,1,1,1,2,0,0,0,,, -cWW_tHW_CGA,2,1,5,1,4,4,4,9.9,12.05,0,,, -cWW_tHW_CGC,6,0,2,1,5,5,5,0,0,0,,, -cWW_tHW_CGG,25,0,1,1,6,6,6,0,0,0,,, -cWW_tHW_CGU,0,4,0,1,4,5,5,0,0,0,,, -cWW_tHW_CUG,0,2,0,1,2,2,2,0,0,0,,, -cWW_tHW_CUU,1,0,0,1,3,3,3,0,0,29.41,,, -cWW_tHW_GAA,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_GAC,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_GAU,0,1,0,1,4,4,4,10,0,0,,, -cWW_tHW_GCC,2,0,2,1,4,4,6,0,0,0,,, -cWW_tHW_GUG,0,0,0,1,5,5,5,0,0,0,,, -cWW_tHW_GUU,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_UAA,5,0,5,1,4,4,4,0,0,0,,, -cWW_tHW_UAC,19,0,2,1,4,4,4,0,0,0,,, -cWW_tHW_UAU,10,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_UCC,0,0,0,1,2,2,3,0,0,0,,, -cWW_tHW_UGA,2,0,1,1,4,4,4,0,0,25,,, -cWW_tHW_UGC,0,2,0,1,4,5,5,0,0,0,,, -cWW_tHW_UGG,3,0,0,1,6,6,3,0,0,0,,, -cWW_tHW_UGU,1,0,0,1,4,5,4,0,0,0,,, -cWW_tHW_UUG,0,0,0,1,4,4,4,0,0,0,,, -cWW_tHW_UUU,0,0,0,1,3,3,3,0,0,0,,, -cWW_tSH_AAA,0,3,0,1,2,3,3,29.41,35.71,71.43,,, -cWW_tSH_AAC,0,0,0,1,2,2,3,0,0,0,,, -cWW_tSH_AAU,0,5,0,1,1,1,2,50.51,61.73,128.21,,, -cWW_tSH_ACA,0,12,0,1,2,3,4,10,12.2,0,,, -cWW_tSH_ACC,0,22,0,1,2,2,2,204.08,200,184.21,,, -cWW_tSH_AGA,0,1,0,1,4,4,4,0,0,0,,, -cWW_tSH_AGG,2,0,0,1,3,3,5,0,0,0,,, -cWW_tSH_AGU,0,0,0,1,3,3,3,0,0,0,,, -cWW_tSH_AUA,1,0,1,1,3,3,4,0,0,25.64,,, -cWW_tSH_AUC,0,3,1,1,3,3,3,20.62,12.66,0,,, -cWW_tSH_CAA,0,0,0,1,2,2,2,0,0,0,,, -cWW_tSH_CAC,0,0,0,1,2,2,2,0,0,0,,, -cWW_tSH_CAU,0,13,0,1,1,1,1,123.71,101.27,0,,, -cWW_tSH_CCA,0,0,0,1,1,2,2,0,0,0,,, -cWW_tSH_CCC,0,16,0,1,1,1,1,135.42,115.38,0,,, -cWW_tSH_CGA,4,0,18,1,5,5,7,0,0,0,,, -cWW_tSH_CGG,1,0,8,1,4,4,4,0,0,0,,, -cWW_tSH_CGU,1,1,5,1,4,4,4,0,0,0,,, -cWW_tSH_CUA,0,8,0,1,2,2,2,61.86,63.29,27.03,,, -cWW_tSH_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -cWW_tSH_GAA,0,1,0,1,4,4,4,9.71,11.76,23.26,,, -cWW_tSH_GAC,0,0,0,1,3,3,3,0,0,0,,, -cWW_tSH_GAU,0,3,1,1,2,2,2,30.3,37.04,76.92,,, -cWW_tSH_GCA,1,1,4,1,5,5,8,10,12.05,24.39,,, -cWW_tSH_GCC,0,17,3,1,4,4,4,151.52,135.8,51.28,,, -cWW_tSH_GUA,0,16,0,1,3,4,4,71.43,75,26.32,,, -cWW_tSH_GUC,0,16,0,1,3,3,3,20.83,12.82,0,,, -cWW_tSH_UAA,1,0,0,1,3,3,7,0,0,0,,, -cWW_tSH_UAC,0,0,8,1,3,3,3,0,0,0,,, -cWW_tSH_UAU,0,5,0,1,2,2,2,52.08,64.1,83.33,,, -cWW_tSH_UCA,0,0,0,1,2,2,2,0,0,0,,, -cWW_tSH_UCC,0,14,0,1,2,2,2,136.84,116.88,0,,, -cWW_tSH_UGA,2,0,1,1,5,5,5,0,0,0,,, -cWW_tSH_UGG,0,0,1,1,4,4,5,0,0,0,,, -cWW_tSH_UGU,1,0,1,1,4,4,4,0,0,0,,, -cWW_tSH_UUA,0,20,0,1,3,5,5,114.58,128.21,27.78,,, -cWW_tSH_UUC,0,23,0,1,3,4,4,95.74,105.26,0,,, -cWW_tSW_AAA,0,3,0,1,2,2,3,20.62,35.71,71.43,,, -cWW_tSW_AAC,0,0,0,1,2,2,3,206.52,0,0,,, -cWW_tSW_AAU,0,0,0,1,2,3,4,0,0,0,,, -cWW_tSW_ACA,0,17,0,1,2,2,2,0,134.15,50,,, -cWW_tSW_ACC,0,16,0,1,3,3,3,0,175,315.79,,, -cWW_tSW_ACG,0,5,0,1,2,3,3,0,0,0,,, -cWW_tSW_ACU,0,26,0,1,1,2,2,134.02,89.74,0,,, -cWW_tSW_AGA,2,0,1,1,4,4,4,0,0,0,,, -cWW_tSW_AGC,0,0,1,1,4,5,5,0,0,0,,, -cWW_tSW_AGU,0,0,0,1,3,3,3,0,0,0,,, -cWW_tSW_AUA,1,0,0,1,3,3,5,0,0,0,,, -cWW_tSW_AUC,0,0,0,1,3,4,4,10.2,0,0,,, -cWW_tSW_AUG,0,9,1,1,5,6,6,0,60.98,100,,, -cWW_tSW_AUU,0,6,1,1,3,3,3,83.33,51.28,83.33,,, -cWW_tSW_CAA,0,0,0,1,2,2,2,42.55,0,0,,, -cWW_tSW_CAU,0,2,0,1,2,2,2,52.63,0,0,,, -cWW_tSW_CCA,0,16,0,1,1,1,1,33.71,112.5,0,,, -cWW_tSW_CCC,0,1,0,1,1,1,1,0,0,0,,, -cWW_tSW_CCG,0,3,1,1,3,3,3,9.71,12.35,25.64,,, -cWW_tSW_CCU,0,1,0,1,1,1,1,160,0,0,,, -cWW_tSW_CGA,50,0,41,1,5,6,7,210,0,0,,, -cWW_tSW_CGC,4,0,1,1,5,6,6,9.71,0,0,,, -cWW_tSW_CGU,2,0,2,1,4,4,6,0,0,0,,, -cWW_tSW_CUA,0,0,0,1,2,2,2,40.4,0,0,,, -cWW_tSW_CUC,0,0,0,1,2,2,2,0,0,0,,, -cWW_tSW_CUG,0,3,0,1,3,3,3,0,12.5,0,,, -cWW_tSW_CUU,0,4,0,1,2,2,2,79.21,39.47,0,,, -cWW_tSW_GAA,0,2,0,1,4,4,4,132.65,0,0,,, -cWW_tSW_GAC,0,0,0,1,3,3,3,131.31,0,0,,, -cWW_tSW_GAU,0,2,3,1,3,3,3,0,24.69,0,,, -cWW_tSW_GCA,0,14,3,1,4,4,4,9.9,108.43,0,,, -cWW_tSW_GCC,1,0,2,1,5,5,6,9.8,0,0,,, -cWW_tSW_GCG,3,0,6,1,5,6,4,0,0,71.43,,, -cWW_tSW_GCU,0,7,2,1,4,6,6,0,0,0,,, -cWW_tSW_GUA,0,14,0,1,2,2,2,9.71,123.46,256.41,,, -cWW_tSW_GUC,0,11,0,1,2,3,3,0,64.94,85.71,,, -cWW_tSW_GUG,0,20,0,1,1,1,1,9.62,12.66,0,,, -cWW_tSW_GUU,0,58,0,1,5,2,2,0,256.76,0,,, -cWW_tSW_UAA,0,0,0,1,3,3,3,128.71,0,0,,, -cWW_tSW_UAC,0,0,1,1,3,3,3,9.8,0,0,,, -cWW_tSW_UAU,3,0,0,1,3,3,5,127.45,0,0,,, -cWW_tSW_UCA,0,14,0,1,2,2,2,79.21,113.92,0,,, -cWW_tSW_UCC,0,0,0,1,2,2,2,0,0,0,,, -cWW_tSW_UCG,0,0,0,1,3,4,4,0,0,0,,, -cWW_tSW_UCU,0,0,0,1,2,2,2,170,0,0,,, -cWW_tSW_UGA,4,0,0,1,5,6,6,134.02,0,0,,, -cWW_tSW_UGC,1,0,1,1,5,6,6,0,0,0,,, -cWW_tSW_UGU,0,0,3,1,4,4,4,0,0,0,,, -cWW_tSW_UUA,0,14,0,1,3,4,4,0,102.56,55.56,,, -cWW_tSW_UUC,0,22,0,1,2,3,3,0,52.63,88.24,,, -cWW_tSW_UUG,0,22,0,1,1,1,1,63.16,51.95,0,,, -cWW_tSW_UUU,0,67,0,1,1,5,7,154.64,42.25,0,,, -cWW_tSS_AAA,0,0,2,1,1,1,2,29.41,0,0,,, -cWW_tSS_AAG,0,1,0,1,1,2,3,0,0,0,,, -cWW_tSS_ACA,0,18,0,1,1,1,1,0,146.34,75,,, -cWW_tSS_ACG,0,79,0,1,4,6,6,150,195.12,24.39,,, -cWW_tSS_AGA,4,0,1,1,3,3,5,142.86,0,23.26,,, -cWW_tSS_AGG,5,0,1,1,4,4,5,72.92,0,0,,, -cWW_tSS_AUA,8,0,5,1,2,2,3,0,0,0,,, -cWW_tSS_AUG,0,1,1,1,3,3,3,0,0,0,,, -cWW_tSS_CAA,0,0,1,1,1,1,2,0,0,0,,, -cWW_tSS_CAG,0,8,0,1,1,4,4,0,60.24,0,,, -cWW_tSS_CCA,0,16,1,1,0,0,0,0,112.5,0,,, -cWW_tSS_CCG,0,16,0,1,1,1,1,60,111.11,0,,, -cWW_tSS_CGA,277,1,35,1,4,5,7,52.08,0,24.39,,, -cWW_tSS_CGG,19,1,1,1,5,7,6,0,11.9,0,,, -cWW_tSS_CUA,2,0,1,1,1,1,3,0,0,0,,, -cWW_tSS_CUG,0,1,0,1,2,2,2,0,0,0,,, -cWW_tSS_GAA,1,3,1,1,2,3,2,0,11.76,0,,, -cWW_tSS_GAG,0,1,0,1,2,3,3,0,0,0,,, -cWW_tSS_GCA,80,1,18,1,4,4,6,0,0,0,,, -cWW_tSS_GCG,5,2,5,1,5,7,7,20.41,0,0,,, -cWW_tSS_GUA,0,6,0,1,2,4,5,0,24.39,25,,, -cWW_tSS_GUG,0,13,0,1,3,7,7,20.41,96.39,24.39,,, -cWW_tSS_UAA,7,0,4,1,2,3,6,31.91,0,0,,, -cWW_tSS_UAG,0,16,0,1,2,5,6,0,134.15,0,,, -cWW_tSS_UCA,0,14,0,1,1,1,1,20.2,113.92,0,,, -cWW_tSS_UCG,0,14,0,1,2,3,3,128.71,112.5,0,,, -cWW_tSS_UGA,16,0,4,1,4,4,4,0,0,25,,, -cWW_tSS_UGG,2,0,1,1,5,5,6,0,0,0,,, -cWW_tSS_UUA,1,0,0,1,2,2,4,0,0,27.78,,, -cWW_tSS_UUG,0,15,0,1,4,6,6,52.63,189.87,27.03,,, -tHH_cSH_AAA,0,4,0,1,3,5,6,29.41,11.9,0,,, -tHH_cSH_AAC,0,1,0,1,3,4,4,0,0,0,,, -tHH_cSH_AAG,0,7,0,1,2,3,3,0,0,0,,, -tHH_cSH_AAU,0,0,0,1,2,3,4,0,0,0,,, -tHH_cSH_ACA,0,1,0,1,2,3,3,10,0,0,,, -tHH_cSH_ACC,0,3,0,1,2,3,4,30.61,37.5,52.63,,, -tHH_cSH_ACU,0,20,0,1,1,3,5,185.57,113.92,0,,, -tHH_cSH_AGA,0,1,0,1,2,2,2,9.71,11.76,23.26,,, -tHH_cSH_AGC,0,1,0,1,1,1,1,0,0,0,,, -tHH_cSH_AGG,0,0,0,1,2,2,2,0,0,0,,, -tHH_cSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -tHH_cSH_AUA,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSH_AUC,0,3,0,1,2,2,2,20.62,12.66,0,,, -tHH_cSH_AUU,0,3,0,1,1,1,1,20.83,12.82,0,,, -tHH_cSH_CAA,0,4,0,1,2,3,4,30,12.2,0,,, -tHH_cSH_CAG,0,7,0,1,1,1,1,0,0,0,,, -tHH_cSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tHH_cSH_CGA,0,1,0,1,2,3,3,9.9,12.05,24.39,,, -tHH_cSH_CGC,0,2,0,1,1,2,3,10.1,0,0,,, -tHH_cSH_CGG,0,1,0,1,2,3,6,9.8,0,0,,, -tHH_cSH_CGU,0,0,0,1,2,3,4,0,0,0,,, -tHH_cSH_CUA,0,3,0,1,2,2,2,20.62,12.66,0,,, -tHH_cSH_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -tHH_cSH_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -tHH_cSH_GAA,0,4,0,1,2,3,4,29.13,11.76,0,,, -tHH_cSH_GAC,0,1,0,1,2,2,2,0,0,0,,, -tHH_cSH_GAG,0,7,0,1,1,1,1,0,0,0,,, -tHH_cSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -tHH_cSH_GCA,0,1,0,1,2,2,3,9.9,0,0,,, -tHH_cSH_GCC,0,3,0,1,2,2,3,30.3,37.04,51.28,,, -tHH_cSH_GCU,0,15,0,1,1,2,3,142.86,112.5,0,,, -tHH_cSH_GGA,0,1,0,1,1,1,1,9.62,11.63,22.73,,, -tHH_cSH_GGC,0,15,0,1,0,0,0,0,11.9,0,,, -tHH_cSH_GGG,0,0,0,1,1,2,4,0,0,0,,, -tHH_cSH_GGU,0,11,0,1,1,1,1,0,0,0,,, -tHH_cSH_UAA,0,4,0,1,2,4,5,30.3,12.35,0,,, -tHH_cSH_UAC,0,1,0,1,2,3,3,0,0,0,,, -tHH_cSH_UAG,0,7,0,1,1,2,2,0,0,0,,, -tHH_cSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -tHH_cSH_UCA,0,1,0,1,2,3,3,10.31,0,0,,, -tHH_cSH_UCC,0,3,0,1,2,3,3,31.58,38.96,57.14,,, -tHH_cSH_UCU,0,15,0,1,1,3,3,148.94,118.42,0,,, -tHH_cSS_AAA,1,0,0,1,2,3,7,0,0,0,,, -tHH_cSS_AAC,11,3,0,1,2,3,5,10,12.2,0,,, -tHH_cSS_AAG,5,0,3,1,3,4,4,0,0,0,,, -tHH_cSS_AAU,2,1,1,1,2,6,6,0,0,0,,, -tHH_cSS_ACA,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSS_ACC,0,0,0,1,1,2,2,0,0,0,,, -tHH_cSS_ACG,0,1,0,1,2,4,4,0,0,0,,, -tHH_cSS_ACU,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSS_AGA,0,0,0,1,1,3,3,0,0,0,,, -tHH_cSS_AGC,0,1,0,1,1,1,1,0,0,0,,, -tHH_cSS_AGG,0,0,0,1,1,2,4,0,0,0,,, -tHH_cSS_AGU,0,0,0,1,1,1,1,0,0,0,,, -tHH_cSS_AUA,0,3,1,1,1,3,3,20.2,12.35,0,,, -tHH_cSS_AUC,0,1,0,1,1,4,4,20.62,25.32,0,,, -tHH_cSS_AUG,0,3,0,1,2,3,3,20,12.2,0,,, -tHH_cSS_AUU,0,3,0,1,1,1,1,20.83,12.82,0,,, -tHH_cSS_CAA,0,5,0,1,1,1,1,10.1,0,0,,, -tHH_cSS_CAC,0,6,0,1,1,1,1,0,0,0,,, -tHH_cSS_CAG,0,5,0,1,2,2,2,10,0,0,,, -tHH_cSS_CAU,0,2,0,1,1,3,3,0,0,0,,, -tHH_cSS_CGA,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSS_CGC,0,0,0,1,1,3,4,0,0,0,,, -tHH_cSS_CGG,0,0,0,1,1,3,5,0,0,0,,, -tHH_cSS_CGU,0,0,0,1,1,2,2,0,0,0,,, -tHH_cSS_CUA,0,3,0,1,1,3,3,20.62,12.66,0,,, -tHH_cSS_CUC,0,0,0,1,1,5,5,0,0,0,,, -tHH_cSS_CUG,0,3,0,1,2,3,2,20.41,12.5,0,,, -tHH_cSS_CUU,0,3,0,1,1,1,1,21.28,13.16,0,,, -tHH_cSS_GAA,0,5,0,1,1,1,1,9.8,0,0,,, -tHH_cSS_GAC,0,6,0,1,1,1,1,0,0,0,,, -tHH_cSS_GAG,0,5,0,1,2,2,2,9.71,0,0,,, -tHH_cSS_GAU,0,0,0,1,1,3,3,0,0,0,,, -tHH_cSS_GCA,0,0,1,1,1,3,4,0,0,0,,, -tHH_cSS_GCC,0,0,0,1,1,1,2,0,0,0,,, -tHH_cSS_GCG,0,1,0,1,2,3,4,0,0,0,,, -tHH_cSS_GCU,0,0,0,1,1,3,4,0,0,0,,, -tHH_cSS_GGA,0,7,0,1,0,2,2,9.71,0,0,,, -tHH_cSS_GGC,0,3,0,1,0,1,3,0,0,0,,, -tHH_cSS_GGG,0,0,0,1,0,1,3,0,0,0,,, -tHH_cSS_GGU,0,13,0,1,0,0,1,0,0,0,,, -tHH_cSS_UAA,0,5,0,1,1,2,2,10.2,0,0,,, -tHH_cSS_UAC,1,0,0,1,1,2,5,0,0,0,,, -tHH_cSS_UAG,0,5,0,1,2,3,3,10.1,0,0,,, -tHH_cSS_UAU,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSS_UCA,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSS_UCC,0,0,0,1,1,2,2,0,0,0,,, -tHH_cSS_UCG,0,1,0,1,2,4,4,0,0,0,,, -tHH_cSS_UCU,0,0,0,1,1,4,4,0,0,0,,, -tHH_cSW_AAA,2,0,1,1,3,4,5,0,0,0,,, -tHH_cSW_AAC,0,1,0,1,3,4,5,10,0,0,,, -tHH_cSW_AAG,0,2,0,1,2,3,3,19.42,0,0,,, -tHH_cSW_AAU,3,1,0,1,3,5,8,10.1,0,0,,, -tHH_cSW_ACA,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_ACC,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_ACG,0,0,0,1,3,4,4,0,0,0,,, -tHH_cSW_ACU,0,0,0,1,2,3,3,0,0,0,,, -tHH_cSW_AGA,0,0,0,1,1,1,1,0,0,0,,, -tHH_cSW_AGC,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_AGG,0,0,0,1,2,2,2,0,0,0,,, -tHH_cSW_AGU,0,0,0,1,3,3,3,0,0,0,,, -tHH_cSW_AUA,0,3,0,1,2,2,2,20.2,12.35,0,,, -tHH_cSW_AUC,0,3,0,1,2,2,2,20.62,12.66,0,,, -tHH_cSW_AUG,0,1,0,1,3,4,5,10,0,0,,, -tHH_cSW_AUU,0,0,0,1,2,3,3,0,0,0,,, -tHH_cSW_CAA,0,0,0,1,2,2,3,0,0,0,,, -tHH_cSW_CAC,0,0,0,1,2,2,3,0,0,0,,, -tHH_cSW_CAG,0,2,0,1,1,1,2,19.8,0,0,,, -tHH_cSW_CAU,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_CGA,0,2,0,1,1,2,3,9.9,0,0,,, -tHH_cSW_CGC,0,2,0,1,2,3,4,10.1,0,0,,, -tHH_cSW_CGG,0,0,0,1,2,3,4,0,0,0,,, -tHH_cSW_CGU,0,1,0,1,3,4,5,0,0,0,,, -tHH_cSW_CUA,0,3,0,1,2,2,2,20.62,12.66,0,,, -tHH_cSW_CUC,0,3,0,1,2,2,2,21.05,12.99,0,,, -tHH_cSW_CUG,0,5,0,1,3,3,4,30.61,12.5,0,,, -tHH_cSW_CUU,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_GAA,0,0,0,1,2,2,2,0,0,0,,, -tHH_cSW_GAC,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_GAG,0,2,0,1,1,1,1,19.23,0,0,,, -tHH_cSW_GAU,0,0,0,1,2,3,3,0,0,0,,, -tHH_cSW_GCA,0,14,0,1,2,2,3,128.71,108.43,0,,, -tHH_cSW_GCC,0,14,0,1,2,2,3,131.31,111.11,0,,, -tHH_cSW_GCG,0,14,0,1,3,3,4,127.45,107.14,0,,, -tHH_cSW_GCU,0,0,0,1,2,3,4,0,0,0,,, -tHH_cSW_GGA,0,15,0,1,0,0,0,0,11.63,0,,, -tHH_cSW_GGC,0,0,0,1,1,5,7,0,0,0,,, -tHH_cSW_GGG,0,11,0,1,1,1,1,0,0,0,,, -tHH_cSW_GGU,0,0,0,1,2,4,6,0,0,0,,, -tHH_cSW_UAA,0,0,0,1,2,3,3,0,0,0,,, -tHH_cSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -tHH_cSW_UAG,0,2,0,1,1,2,2,20,0,0,,, -tHH_cSW_UAU,0,0,0,1,2,4,4,0,0,0,,, -tHH_cSW_UCA,0,14,0,1,2,3,3,134.02,113.92,0,,, -tHH_cSW_UCC,0,14,0,1,2,3,3,136.84,116.88,0,,, -tHH_cSW_UCG,0,14,0,1,3,4,4,132.65,112.5,0,,, -tHH_cSW_UCU,0,0,0,1,2,4,4,0,0,0,,, -tHH_tSH_AAA,1,3,0,1,3,4,5,9.8,11.9,0,,, -tHH_tSH_AAC,0,1,0,1,3,4,5,10,0,0,,, -tHH_tSH_AAU,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSH_ACA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSH_ACC,0,19,0,1,2,3,5,173.47,112.5,0,,, -tHH_tSH_AGA,0,1,0,1,3,3,3,0,0,0,,, -tHH_tSH_AGG,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSH_AUA,0,8,0,1,2,2,2,60.61,61.73,25.64,,, -tHH_tSH_AUC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSH_CAA,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSH_CAC,0,0,0,1,2,2,3,0,0,0,,, -tHH_tSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tHH_tSH_CGA,0,2,0,1,3,4,5,9.9,0,0,,, -tHH_tSH_CGG,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSH_CGU,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSH_CUA,0,8,0,1,2,2,2,61.86,63.29,27.03,,, -tHH_tSH_CUC,0,3,0,1,2,0,2,21.05,12.99,0,,, -tHH_tSH_GAA,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSH_GAC,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -tHH_tSH_GCA,0,0,0,1,2,2,3,0,0,0,,, -tHH_tSH_GCC,0,14,0,1,2,2,3,131.31,111.11,0,,, -tHH_tSH_GGA,0,15,0,1,2,2,2,0,11.63,0,,, -tHH_tSH_GGG,0,0,0,1,1,2,4,0,0,0,,, -tHH_tSH_GGU,0,0,0,1,1,2,4,0,0,0,,, -tHH_tSH_UAA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSH_UAC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSH_UAU,0,0,0,1,1,2,2,0,0,0,,, -tHH_tSH_UCA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSH_UCC,0,14,0,1,2,3,3,136.84,116.88,0,,, -tHH_tSS_AAA,0,0,0,1,2,4,5,0,0,0,,, -tHH_tSS_AAC,3,0,4,1,2,4,3,0,0,0,,, -tHH_tSS_AAG,11,0,1,1,3,5,5,0,0,23.26,,, -tHH_tSS_AAU,0,1,0,1,2,4,5,0,0,0,,, -tHH_tSS_AGA,0,1,0,1,1,1,1,9.71,0,0,,, -tHH_tSS_AGC,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSS_AGG,1,3,0,1,3,4,5,28.85,34.88,0,,, -tHH_tSS_AGU,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSS_CAA,0,0,0,1,1,3,3,0,0,0,,, -tHH_tSS_CAG,0,1,0,1,2,5,5,9.9,12.05,24.39,,, -tHH_tSS_CAU,0,1,0,1,1,3,3,0,0,0,,, -tHH_tSS_CGA,0,4,0,1,1,2,3,19.8,0,0,,, -tHH_tSS_CGC,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSS_CGG,0,0,0,1,3,5,6,0,0,0,,, -tHH_tSS_CGU,0,0,0,1,2,4,5,0,0,0,,, -tHH_tSS_GAA,0,0,0,1,1,2,2,0,0,0,,, -tHH_tSS_GAC,0,0,0,1,1,2,2,0,0,0,,, -tHH_tSS_GAG,0,1,0,1,2,3,3,9.62,11.63,22.73,,, -tHH_tSS_GAU,0,1,0,1,1,2,2,0,0,0,,, -tHH_tSS_GGA,0,17,0,1,0,0,0,9.62,11.63,0,,, -tHH_tSS_GGC,0,0,0,1,1,2,4,0,0,0,,, -tHH_tSS_GGG,1,0,0,1,2,4,6,0,0,0,,, -tHH_tSS_GGU,0,0,0,1,1,3,5,0,0,0,,, -tHH_tSS_UAA,0,0,0,1,1,3,3,0,0,0,,, -tHH_tSS_UAC,0,0,0,1,1,3,3,0,0,0,,, -tHH_tSS_UAG,0,1,0,1,2,4,4,10,12.2,25,,, -tHH_tSS_UAU,0,1,0,1,1,3,3,0,0,0,,, -tHH_tSW_AAA,0,0,0,1,3,4,5,0,0,0,,, -tHH_tSW_AAC,0,0,0,1,3,4,5,0,0,0,,, -tHH_tSW_AAU,0,2,0,1,3,4,5,0,0,0,,, -tHH_tSW_ACA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_ACC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_ACG,0,0,0,1,3,5,5,0,0,0,,, -tHH_tSW_ACU,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_AGA,0,0,0,1,3,3,3,0,0,0,,, -tHH_tSW_AGC,0,0,0,1,3,4,4,0,0,0,,, -tHH_tSW_AGU,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSW_AUA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_AUC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_AUG,0,0,0,1,3,6,6,0,0,0,,, -tHH_tSW_AUU,0,4,0,1,2,3,3,31.25,38.46,0,,, -tHH_tSW_CAA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_CAC,0,1,0,1,2,2,3,10.2,0,0,,, -tHH_tSW_CAU,0,1,0,1,2,5,5,10.31,12.66,0,,, -tHH_tSW_CGA,0,0,0,1,3,5,6,0,0,0,,, -tHH_tSW_CGC,0,0,0,1,3,5,6,0,0,0,,, -tHH_tSW_CGU,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSW_CUA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_CUC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_CUG,0,3,0,1,3,3,3,20.41,12.5,0,,, -tHH_tSW_CUU,0,4,0,1,2,4,4,31.91,39.47,0,,, -tHH_tSW_GAA,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSW_GAC,0,0,0,1,2,2,2,0,0,0,,, -tHH_tSW_GAU,0,2,0,1,2,2,2,20,24.39,0,,, -tHH_tSW_GCA,0,14,0,1,2,2,3,128.71,108.43,0,,, -tHH_tSW_GCC,0,0,0,1,2,3,4,0,0,0,,, -tHH_tSW_GCG,0,1,0,1,3,6,7,0,0,0,,, -tHH_tSW_GCU,0,0,0,1,2,4,5,0,0,0,,, -tHH_tSW_GGA,0,0,0,1,2,4,6,0,0,0,,, -tHH_tSW_GGC,0,0,0,1,2,4,6,0,0,0,,, -tHH_tSW_GGU,0,0,0,1,1,2,4,0,12.05,24.39,,, -tHH_tSW_UAA,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_UAU,0,2,0,1,2,3,3,21.05,25.97,0,,, -tHH_tSW_UCA,0,14,0,1,2,3,3,134.02,113.92,0,,, -tHH_tSW_UCC,0,0,0,1,2,3,3,0,0,0,,, -tHH_tSW_UCG,0,1,0,1,3,5,5,10.2,12.5,0,,, -tHH_tSW_UCU,0,0,0,1,2,3,3,0,0,0,,, -tHW_cHH_AAG,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHH_ACG,0,39,0,1,2,2,2,0,0,0,,, -tHW_cHH_CCG,0,34,0,1,1,1,1,20.41,0,0,,, -tHW_cHH_GAG,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHH_GCG,0,40,0,1,1,1,1,49.02,59.52,0,,, -tHW_cHH_GGA,0,0,0,1,4,4,5,0,0,0,,, -tHW_cHH_GGC,0,1,0,1,3,3,4,9.9,11.9,0,,, -tHW_cHH_GGG,0,0,0,1,3,3,5,0,0,0,,, -tHW_cHH_UGA,0,1,0,1,3,3,3,10,12.2,25,,, -tHW_cHH_UGC,0,1,0,1,2,2,2,10.31,12.5,0,,, -tHW_cHH_UGG,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHS_AAA,0,2,0,1,3,4,5,19.8,0,0,,, -tHW_cHS_AAC,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHS_AAG,0,1,0,1,3,4,4,9.71,11.76,23.26,,, -tHW_cHS_AAU,0,0,0,1,3,4,4,0,0,0,,, -tHW_cHS_ACA,0,10,0,1,3,3,3,0,0,0,,, -tHW_cHS_ACC,0,11,0,1,3,3,3,72.16,75,52.63,,, -tHW_cHS_ACG,0,3,0,1,2,3,3,29.7,36.14,73.17,,, -tHW_cHS_ACU,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHS_AUA,0,1,0,1,2,2,2,0,0,0,,, -tHW_cHS_AUC,0,0,1,1,2,2,5,0,0,0,,, -tHW_cHS_AUG,48,0,6,1,3,3,7,0,0,0,,, -tHW_cHS_AUU,0,1,0,1,2,2,4,10.42,0,0,,, -tHW_cHS_CCA,0,7,0,1,2,2,2,0,0,0,,, -tHW_cHS_CCC,0,13,0,1,2,2,4,136.84,76.92,55.56,,, -tHW_cHS_CCG,0,0,0,1,1,2,2,0,0,0,,, -tHW_cHS_CCU,0,5,0,1,2,2,2,10.64,0,0,,, -tHW_cHS_GAA,0,2,0,1,2,3,5,19.61,0,0,,, -tHW_cHS_GAC,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHS_GAG,0,8,0,1,2,3,2,19.61,11.63,22.73,,, -tHW_cHS_GAU,0,0,0,1,2,3,4,0,0,0,,, -tHW_cHS_GCA,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHS_GCC,0,7,0,1,2,2,3,71.43,86.42,51.28,,, -tHW_cHS_GCG,0,2,0,1,1,1,2,19.61,23.81,47.62,,, -tHW_cHS_GCU,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHS_GGA,0,2,0,1,3,5,6,9.71,0,0,,, -tHW_cHS_GGG,0,0,0,1,4,4,5,0,0,0,,, -tHW_cHS_GUA,0,11,0,1,2,2,4,100,121.95,150,,, -tHW_cHS_GUC,0,1,0,1,1,2,5,10.2,0,0,,, -tHW_cHS_GUG,0,0,0,1,2,2,4,0,0,0,,, -tHW_cHS_GUU,0,0,0,1,1,1,2,0,0,0,,, -tHW_cHS_UGA,0,2,0,1,2,4,4,10.1,0,0,,, -tHW_cHS_UGG,0,0,0,1,3,4,4,0,0,0,,, -tHW_cHS_UUA,0,8,0,1,1,1,1,83.33,102.56,222.22,,, -tHW_cHS_UUC,0,3,0,1,1,0,1,21.74,0,0,,, -tHW_cHS_UUG,0,2,0,1,2,2,2,0,0,0,,, -tHW_cHS_UUU,0,1,0,1,1,1,1,0,0,0,,, -tHW_cHW_AAG,0,0,0,1,4,4,4,0,0,0,,, -tHW_cHW_AAU,0,0,0,1,4,4,4,0,0,0,,, -tHW_cHW_ACC,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHW_AUA,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHW_AUC,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHW_AUU,1,0,0,1,3,3,4,0,0,0,,, -tHW_cHW_CCC,0,0,0,1,2,2,2,0,0,0,,, -tHW_cHW_GAG,0,0,0,1,3,3,4,0,0,0,,, -tHW_cHW_GAU,0,0,0,1,3,3,4,0,0,0,,, -tHW_cHW_GCC,0,2,0,1,3,3,4,20.2,24.69,51.28,,, -tHW_cHW_GGA,0,1,0,1,4,4,6,9.62,11.63,22.73,,, -tHW_cHW_GGC,0,0,0,1,4,4,6,0,0,0,,, -tHW_cHW_GGG,0,0,0,1,5,5,6,0,0,0,,, -tHW_cHW_GGU,0,1,0,1,4,4,4,9.9,0,0,,, -tHW_cHW_GUA,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHW_GUC,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHW_GUU,0,0,0,1,2,2,3,0,0,0,,, -tHW_cHW_UGA,0,1,0,1,3,3,3,10,12.2,25,,, -tHW_cHW_UGC,0,0,0,1,3,3,4,0,0,0,,, -tHW_cHW_UGG,0,0,0,1,4,4,4,0,0,0,,, -tHW_cHW_UGU,0,0,0,1,3,3,3,0,0,0,,, -tHW_cHW_UUA,0,0,0,1,2,2,2,0,0,0,,, -tHW_cHW_UUC,0,0,0,1,2,2,2,0,0,0,,, -tHW_cHW_UUU,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSH_AAA,0,4,2,1,3,4,5,29.41,11.9,0,,, -tHW_cSH_AAC,0,1,1,1,3,3,3,0,0,0,,, -tHW_cSH_AAG,0,7,0,1,2,2,2,0,0,0,,, -tHW_cSH_AAU,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSH_ACA,0,0,2,1,3,3,3,0,0,0,,, -tHW_cSH_ACC,8,0,3,1,4,4,4,0,0,157.89,,, -tHW_cSH_ACU,0,15,0,1,2,3,3,144.33,113.92,0,,, -tHW_cSH_AUA,0,5,0,1,3,3,3,30.3,24.69,25.64,,, -tHW_cSH_AUC,0,15,0,1,2,2,2,82.47,88.61,162.16,,, -tHW_cSH_AUU,1,0,0,1,2,2,4,0,0,27.78,,, -tHW_cSH_CCA,0,10,0,1,2,2,2,61.22,62.5,131.58,,, -tHW_cSH_CCC,0,10,0,1,0,0,0,32.61,40.54,62.5,,, -tHW_cSH_CCU,0,16,0,1,2,3,3,157.89,129.87,28.57,,, -tHW_cSH_GAA,0,4,0,1,2,3,4,29.13,11.76,0,,, -tHW_cSH_GAC,0,1,0,1,2,2,2,0,0,0,,, -tHW_cSH_GAG,0,7,2,1,1,1,1,0,0,0,,, -tHW_cSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -tHW_cSH_GCA,0,1,5,1,2,2,2,9.9,0,0,,, -tHW_cSH_GCC,0,4,0,1,3,3,3,40.4,49.38,76.92,,, -tHW_cSH_GCU,0,15,0,1,1,2,2,142.86,112.5,0,,, -tHW_cSH_GGA,0,6,0,1,4,4,4,9.71,11.76,23.26,,, -tHW_cSH_GGC,0,1,0,1,3,3,3,0,0,0,,, -tHW_cSH_GGG,0,2,0,1,4,4,6,19.05,0,0,,, -tHW_cSH_GGU,0,0,0,1,4,4,4,0,0,0,,, -tHW_cSH_GUA,0,3,0,1,2,2,2,20,12.2,0,,, -tHW_cSH_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -tHW_cSH_GUU,0,3,0,1,1,1,1,20.62,12.66,0,,, -tHW_cSH_UGA,0,1,0,1,3,3,3,10,12.2,25,,, -tHW_cSH_UGC,0,1,0,1,2,2,2,0,0,0,,, -tHW_cSH_UGG,0,3,0,1,3,3,3,80,24.1,0,,, -tHW_cSH_UGU,0,0,0,1,3,3,3,0,0,0,,, -tHW_cSH_UUA,0,3,0,1,2,2,2,20.83,12.82,0,,, -tHW_cSH_UUC,1,0,0,1,2,2,3,0,0,0,,, -tHW_cSH_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -tHW_cSS_AAA,0,5,0,1,2,2,2,9.9,0,0,,, -tHW_cSS_AAC,3,0,1,1,2,2,4,0,0,0,,, -tHW_cSS_AAG,3,0,3,1,3,3,4,0,0,0,,, -tHW_cSS_AAU,7,0,2,1,2,5,5,0,0,0,,, -tHW_cSS_ACA,2,1,0,1,2,4,3,10,0,0,,, -tHW_cSS_ACC,0,0,0,1,2,3,3,0,0,0,,, -tHW_cSS_ACG,0,1,0,1,3,4,4,0,0,0,,, -tHW_cSS_ACU,0,0,0,1,2,4,4,0,0,0,,, -tHW_cSS_AUA,32,1,8,1,3,5,6,10.1,12.35,0,,, -tHW_cSS_AUC,0,0,0,1,2,4,4,0,0,0,,, -tHW_cSS_AUG,3,2,2,1,3,4,5,0,0,100,,, -tHW_cSS_AUU,0,3,2,1,2,2,2,20.83,12.82,0,,, -tHW_cSS_CCA,0,0,1,1,1,3,3,0,0,0,,, -tHW_cSS_CCC,0,0,0,1,1,1,1,0,0,0,,, -tHW_cSS_CCG,1,0,0,1,2,3,8,0,0,0,,, -tHW_cSS_CCU,0,0,0,1,1,3,3,0,0,0,,, -tHW_cSS_GAA,0,5,0,1,1,1,1,9.8,0,0,,, -tHW_cSS_GAC,0,6,1,1,1,1,1,0,0,0,,, -tHW_cSS_GAG,0,5,0,1,2,2,2,9.71,0,0,,, -tHW_cSS_GAU,4,1,0,1,1,3,4,0,0,0,,, -tHW_cSS_GCA,0,0,1,1,1,3,3,0,0,0,,, -tHW_cSS_GCC,0,0,0,1,1,2,3,0,0,0,,, -tHW_cSS_GCG,0,1,0,1,2,3,3,0,0,0,,, -tHW_cSS_GCU,0,0,0,1,1,3,3,0,0,0,,, -tHW_cSS_GGA,0,0,0,1,3,5,5,0,0,0,,, -tHW_cSS_GGC,0,0,0,1,3,4,4,0,0,0,,, -tHW_cSS_GGG,0,0,0,1,3,4,6,0,0,0,,, -tHW_cSS_GGU,1,0,1,1,3,3,7,0,0,0,,, -tHW_cSS_GUA,0,3,0,1,1,3,3,20,12.2,0,,, -tHW_cSS_GUC,0,0,0,1,1,5,5,0,0,0,,, -tHW_cSS_GUG,0,3,0,1,2,3,3,19.8,12.05,0,,, -tHW_cSS_GUU,0,3,0,1,1,1,1,20.62,12.66,0,,, -tHW_cSS_UGA,0,0,0,1,2,4,4,0,0,0,,, -tHW_cSS_UGC,0,5,0,1,2,2,2,0,0,0,,, -tHW_cSS_UGG,0,0,0,1,2,3,5,0,0,0,,, -tHW_cSS_UGU,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSS_UUA,0,3,0,1,1,3,3,20.83,12.82,0,,, -tHW_cSS_UUC,0,0,0,1,1,3,3,0,0,0,,, -tHW_cSS_UUG,0,0,0,1,2,4,4,0,0,0,,, -tHW_cSS_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -tHW_cSW_AAA,0,0,0,1,3,3,3,0,0,0,,, -tHW_cSW_AAC,0,0,0,1,3,3,3,0,0,0,,, -tHW_cSW_AAG,0,2,0,1,2,2,2,19.42,0,0,,, -tHW_cSW_AAU,0,1,0,1,3,4,4,0,0,0,,, -tHW_cSW_ACA,0,14,0,1,3,3,3,130,109.76,0,,, -tHW_cSW_ACC,0,0,0,1,3,4,4,0,0,0,,, -tHW_cSW_ACG,0,14,0,1,5,5,5,128.71,108.43,0,,, -tHW_cSW_ACU,0,0,0,1,4,5,5,0,0,0,,, -tHW_cSW_AUA,1,0,4,1,3,3,2,0,0,102.56,,, -tHW_cSW_AUC,1,0,0,1,3,3,5,0,0,27.03,,, -tHW_cSW_AUG,0,25,0,1,4,2,3,30.3,12.35,0,,, -tHW_cSW_AUU,0,10,0,1,1,2,2,93.75,115.38,250,,, -tHW_cSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -tHW_cSW_CCC,0,2,0,1,2,0,3,0,0,0,,, -tHW_cSW_CCG,0,24,0,1,1,1,1,132.65,112.5,0,,, -tHW_cSW_CCU,0,9,0,1,0,1,1,0,0,0,,, -tHW_cSW_GAA,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSW_GAC,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSW_GAG,0,2,0,1,1,1,1,19.23,0,0,,, -tHW_cSW_GAU,0,0,0,1,2,2,2,0,0,0,,, -tHW_cSW_GCA,0,14,0,1,2,2,2,128.71,108.43,0,,, -tHW_cSW_GCC,0,14,0,1,2,2,2,131.31,111.11,0,,, -tHW_cSW_GCG,0,14,0,1,4,4,4,127.45,107.14,0,,, -tHW_cSW_GCU,0,0,0,1,3,4,4,0,0,0,,, -tHW_cSW_GGA,0,1,0,1,3,3,3,0,0,0,,, -tHW_cSW_GGC,0,1,0,1,4,4,4,0,0,0,,, -tHW_cSW_GGG,0,0,0,1,4,4,4,0,0,0,,, -tHW_cSW_GGU,0,0,0,1,5,5,5,0,0,0,,, -tHW_cSW_GUA,0,3,0,1,2,2,2,20,12.2,0,,, -tHW_cSW_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -tHW_cSW_GUG,0,8,0,1,3,3,4,59.41,48.19,73.17,,, -tHW_cSW_GUU,0,1,0,1,2,4,4,10.31,12.66,27.03,,, -tHW_cSW_UGA,0,1,0,1,2,2,2,0,0,0,,, -tHW_cSW_UGC,0,1,0,1,3,3,3,0,0,0,,, -tHW_cSW_UGG,0,0,0,1,3,3,3,0,0,0,,, -tHW_cSW_UGU,0,10,0,1,4,5,5,92.78,113.92,0,,, -tHW_cSW_UUA,0,3,0,1,2,2,2,20.83,12.82,0,,, -tHW_cSW_UUC,0,3,0,1,2,2,2,21.28,13.16,0,,, -tHW_cSW_UUG,0,7,0,1,4,4,5,51.55,37.97,54.05,,, -tHW_cSW_UUU,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHH_AAA,0,0,0,1,4,5,5,0,0,0,,, -tHW_tHH_AAC,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHH_AAG,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHH_AAU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tHH_ACA,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHH_ACG,0,0,0,1,3,4,5,0,0,0,,, -tHW_tHH_ACU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tHH_AUA,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHH_AUC,0,0,1,1,3,4,4,0,0,0,,, -tHW_tHH_CCA,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHH_CCG,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHH_CCU,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHH_GAA,0,0,0,1,3,4,5,0,0,0,,, -tHW_tHH_GAC,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHH_GAG,0,0,0,1,2,2,2,0,0,0,,, -tHW_tHH_GAU,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHH_GCA,0,0,0,1,2,2,3,0,0,0,,, -tHW_tHH_GCG,0,0,0,1,2,3,5,0,0,0,,, -tHW_tHH_GCU,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHH_GGA,0,0,0,1,4,5,6,0,0,0,,, -tHW_tHH_GGC,0,0,0,1,4,4,6,0,0,0,,, -tHW_tHH_GGG,0,0,0,1,3,3,4,0,0,0,,, -tHW_tHH_GUA,0,55,0,1,2,4,4,130,48.78,0,,, -tHW_tHH_GUC,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHH_UGA,0,5,0,1,3,4,5,50,48.78,100,,, -tHW_tHH_UGC,0,0,0,1,3,3,4,0,0,0,,, -tHW_tHH_UGG,0,0,0,1,2,2,2,0,0,0,,, -tHW_tHH_UUA,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHH_UUC,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHS_AAA,0,53,0,1,3,3,2,372.55,202.38,0,,, -tHW_tHS_AAC,0,26,0,1,3,4,4,161.62,148.15,0,,, -tHW_tHS_AAG,0,39,5,1,4,4,4,9.9,12.05,0,,, -tHW_tHS_AAU,0,52,0,1,3,3,3,41.24,50.63,51.28,,, -tHW_tHS_ACA,0,48,0,1,3,4,4,450,292.68,0,,, -tHW_tHS_ACC,0,8,0,1,3,5,5,61.22,12.5,0,,, -tHW_tHS_ACU,0,2,0,1,3,3,3,10.31,0,0,,, -tHW_tHS_AUA,0,0,0,1,2,3,3,0,0,0,,, -tHW_tHS_AUG,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHS_CCA,0,0,0,1,2,2,2,0,0,0,,, -tHW_tHS_CCC,0,13,0,1,2,2,2,135.42,115.38,0,,, -tHW_tHS_CCU,0,0,0,1,2,4,4,0,0,0,,, -tHW_tHS_GAA,0,10,0,1,2,4,5,67.96,82.35,0,,, -tHW_tHS_GAC,0,3,0,1,2,4,5,19.8,24.1,0,,, -tHW_tHS_GAG,0,12,0,1,3,5,6,115.38,127.91,0,,, -tHW_tHS_GAU,0,19,0,1,2,5,6,170,170.73,25,,, -tHW_tHS_GCA,0,21,0,1,2,3,4,80,97.56,0,,, -tHW_tHS_GCC,0,6,0,1,2,4,6,40.4,49.38,0,,, -tHW_tHS_GCU,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHS_GGG,2,0,0,1,4,4,5,0,0,0,,, -tHW_tHS_GUA,0,10,0,1,1,1,1,60.61,74.07,50,,, -tHW_tHS_GUG,0,13,0,1,2,3,3,70,85.37,0,,, -tHW_tHS_UGG,0,4,0,1,3,5,5,19.8,24.1,0,,, -tHW_tHS_UUA,0,0,0,1,1,1,1,0,0,0,,, -tHW_tHS_UUG,0,0,0,1,2,2,2,0,0,0,,, -tHW_tHW_AAA,2,0,0,1,4,4,4,0,0,0,,, -tHW_tHW_AAC,0,14,0,1,4,4,4,130,109.76,0,,, -tHW_tHW_AAU,0,0,0,1,4,4,4,0,0,0,,, -tHW_tHW_ACC,6,0,1,1,3,3,4,0,0,0,,, -tHW_tHW_AUG,0,0,0,1,4,4,4,0,0,0,,, -tHW_tHW_AUU,0,0,0,1,3,4,5,0,0,0,,, -tHW_tHW_CCC,0,0,0,1,2,2,3,0,0,0,,, -tHW_tHW_GAA,0,0,0,1,3,3,4,0,0,0,,, -tHW_tHW_GAC,0,0,0,1,3,3,4,0,0,0,,, -tHW_tHW_GAU,0,0,0,1,3,3,4,0,0,0,,, -tHW_tHW_GCC,0,0,0,1,2,2,3,0,0,0,,, -tHW_tHW_GGA,0,0,0,1,4,4,5,0,0,0,,, -tHW_tHW_GGC,0,0,0,1,4,4,5,0,0,0,,, -tHW_tHW_GGG,0,2,0,1,6,6,7,0,0,0,,, -tHW_tHW_GGU,0,0,0,1,4,5,5,0,0,0,,, -tHW_tHW_GUG,0,1,0,1,3,3,4,0,0,0,,, -tHW_tHW_GUU,0,0,0,1,2,3,4,0,0,0,,, -tHW_tHW_UGA,0,0,0,1,3,3,3,0,0,0,,, -tHW_tHW_UGC,0,0,0,1,3,3,3,0,0,0,,, -tHW_tHW_UGG,0,0,0,1,5,5,5,0,0,0,,, -tHW_tHW_UGU,0,0,0,1,3,4,4,0,0,0,,, -tHW_tHW_UUG,0,0,0,1,3,3,3,0,0,0,,, -tHW_tHW_UUU,0,2,0,1,2,0,4,0,0,0,,, -tHW_tSH_AAA,1,0,1,1,3,3,4,0,0,0,,, -tHW_tSH_AAC,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSH_AAU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSH_ACA,0,0,0,1,4,4,4,0,0,0,,, -tHW_tSH_ACC,0,14,0,1,3,3,3,132.65,112.5,0,,, -tHW_tSH_AUA,0,5,3,1,3,3,3,40.4,49.38,51.28,,, -tHW_tSH_AUC,0,5,0,1,3,3,3,51.55,63.29,135.14,,, -tHW_tSH_CCA,0,6,0,1,2,3,3,61.22,75,157.89,,, -tHW_tSH_CCC,0,18,0,1,2,2,2,156.25,141.03,55.56,,, -tHW_tSH_GAA,0,0,0,1,2,3,3,0,0,0,,, -tHW_tSH_GAC,0,0,0,1,2,3,3,0,0,0,,, -tHW_tSH_GAU,0,0,0,1,1,1,1,0,0,0,,, -tHW_tSH_GCA,0,0,0,1,2,2,2,0,0,0,,, -tHW_tSH_GCC,0,14,0,1,2,2,2,131.31,111.11,0,,, -tHW_tSH_GGA,2,1,0,1,5,5,8,0,0,0,,, -tHW_tSH_GGG,0,3,0,1,4,4,5,28.57,34.48,66.67,,, -tHW_tSH_GGU,0,1,0,1,4,4,4,9.9,12.05,24.39,,, -tHW_tSH_GUA,0,8,0,1,2,2,2,60,60.98,25,,, -tHW_tSH_GUC,0,0,0,1,2,2,2,0,0,0,,, -tHW_tSH_UGA,0,1,2,1,4,4,4,0,0,0,,, -tHW_tSH_UGG,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSH_UGU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSH_UUA,0,8,0,1,2,2,2,62.5,64.1,27.78,,, -tHW_tSH_UUC,0,0,0,1,2,2,2,0,0,0,,, -tHW_tSW_AAA,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSW_AAC,0,0,0,1,3,3,3,128.71,0,0,,, -tHW_tSW_AAU,0,2,0,1,3,3,3,0,0,0,,, -tHW_tSW_ACA,0,14,1,1,3,3,3,0,109.76,0,,, -tHW_tSW_ACC,4,1,1,1,3,3,5,0,12.5,0,,, -tHW_tSW_ACG,0,0,0,1,4,5,5,0,0,0,,, -tHW_tSW_ACU,2,0,0,1,4,4,7,0,0,0,,, -tHW_tSW_AUA,1,0,0,1,4,4,4,0,0,25.64,,, -tHW_tSW_AUC,0,5,0,1,4,4,4,30.93,63.29,135.14,,, -tHW_tSW_AUG,0,12,0,1,2,2,2,40,12.66,0,,, -tHW_tSW_AUU,0,14,0,1,4,3,3,71.43,64.94,28.57,,, -tHW_tSW_CCA,0,14,0,1,3,3,3,0,112.5,0,,, -tHW_tSW_CCC,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSW_CCG,0,4,0,1,2,3,3,0,0,0,,, -tHW_tSW_CCU,0,7,0,1,2,4,4,20.62,0,0,,, -tHW_tSW_GAA,0,0,0,1,2,2,2,32.26,0,0,,, -tHW_tSW_GAC,0,0,0,1,2,2,2,0,0,0,,, -tHW_tSW_GAU,0,0,0,1,2,3,3,9.71,0,0,,, -tHW_tSW_GCA,0,14,0,1,2,2,2,130,108.43,0,,, -tHW_tSW_GCC,0,0,5,1,2,2,2,128.71,0,0,,, -tHW_tSW_GCG,0,0,0,1,4,5,5,40.4,0,0,,, -tHW_tSW_GCU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSW_GGA,0,0,0,1,5,5,5,132.65,0,0,,, -tHW_tSW_GGC,0,0,0,1,5,6,6,40.4,0,0,,, -tHW_tSW_GGU,0,1,0,1,4,4,4,0,0,0,,, -tHW_tSW_GUA,0,0,0,1,2,3,3,9.62,0,0,,, -tHW_tSW_GUC,0,0,0,1,2,3,3,128.71,0,0,,, -tHW_tSW_GUG,0,3,0,1,4,4,4,0,12.05,0,,, -tHW_tSW_GUU,0,4,0,1,2,3,3,9.62,37.97,0,,, -tHW_tSW_UGA,0,6,0,1,4,4,4,9.52,48.78,0,,, -tHW_tSW_UGC,0,10,0,1,4,4,4,40,75,0,,, -tHW_tSW_UGU,0,0,0,1,3,3,3,0,0,0,,, -tHW_tSW_UUA,0,0,0,1,2,2,2,10,0,0,,, -tHW_tSW_UUC,0,0,0,1,2,2,2,0,0,0,,, -tHW_tSW_UUG,0,3,0,1,4,4,4,41.67,12.66,0,,, -tHW_tSW_UUU,0,4,0,1,2,2,2,0,40,0,,, -tHW_tSS_AAA,0,0,0,1,2,2,3,0,0,0,,, -tHW_tSS_AAG,0,1,1,1,2,3,3,0,0,0,,, -tHW_tSS_ACA,0,14,0,1,2,2,2,0,109.76,0,,, -tHW_tSS_ACG,0,14,0,1,3,4,4,0,108.43,0,,, -tHW_tSS_AUA,32,0,5,1,3,4,4,130,0,0,,, -tHW_tSS_AUG,0,0,0,1,4,5,5,0,0,0,,, -tHW_tSS_CCA,0,14,0,1,2,2,2,0,112.5,0,,, -tHW_tSS_CCG,0,4,0,1,4,4,4,0,49.38,25.64,,, -tHW_tSS_GAA,0,0,0,1,1,1,1,0,0,0,,, -tHW_tSS_GAG,0,1,0,1,1,2,2,0,0,0,,, -tHW_tSS_GCA,0,14,0,1,1,1,1,10.1,108.43,0,,, -tHW_tSS_GCG,0,1,0,1,2,2,2,51.55,0,0,,, -tHW_tSS_GGA,0,1,0,1,4,5,5,20.62,11.63,22.73,,, -tHW_tSS_GGG,0,2,0,1,6,6,6,63.16,11.49,0,,, -tHW_tSS_GUA,0,6,0,1,1,1,2,132.65,12.2,0,,, -tHW_tSS_GUG,0,1,0,1,2,2,2,0,0,0,,, -tHW_tSS_UGA,0,2,0,1,3,3,3,0,12.2,25,,, -tHW_tSS_UGG,0,1,0,1,4,4,4,0,0,0,,, -tHW_tSS_UUA,0,6,0,1,1,1,2,0,12.82,0,,, -tHW_tSS_UUG,0,1,0,1,2,2,2,0,0,0,,, -tSH_cSH_AAA,0,4,0,1,2,4,5,29.41,11.9,0,,, -tSH_cSH_AAC,0,1,0,1,2,3,3,0,0,0,,, -tSH_cSH_AAG,0,7,0,1,1,2,2,0,0,0,,, -tSH_cSH_AAU,0,0,0,1,1,2,2,0,0,0,,, -tSH_cSH_ACA,0,1,0,1,2,4,4,10,0,0,,, -tSH_cSH_ACC,0,3,0,1,2,3,3,30.61,37.5,52.63,,, -tSH_cSH_ACU,0,15,0,1,1,3,3,144.33,113.92,0,,, -tSH_cSH_AUA,0,0,0,1,1,2,2,0,0,0,,, -tSH_cSH_AUC,0,3,0,1,1,1,1,20.62,12.66,0,,, -tSH_cSH_AUU,0,3,0,1,0,0,0,20.83,12.82,0,,, -tSH_cSH_CAA,0,4,0,1,2,4,5,30,12.2,0,,, -tSH_cSH_CAC,0,1,0,1,2,3,3,0,0,0,,, -tSH_cSH_CAG,0,7,0,1,1,2,2,0,0,0,,, -tSH_cSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tSH_cSH_CCA,0,1,0,1,2,3,3,10.2,0,0,,, -tSH_cSH_CCC,0,3,0,1,2,3,3,31.25,38.46,55.56,,, -tSH_cSH_CCU,0,15,0,1,1,3,3,147.37,116.88,0,,, -tSH_cSH_GAA,0,4,0,1,3,5,6,29.13,11.76,0,,, -tSH_cSH_GAC,0,1,0,1,3,4,4,0,0,0,,, -tSH_cSH_GAG,0,7,1,1,2,3,3,0,0,0,,, -tSH_cSH_GAU,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSH_GGA,0,1,0,1,2,2,2,9.62,11.63,22.73,,, -tSH_cSH_GGC,0,1,0,1,1,1,1,0,0,0,,, -tSH_cSH_GGG,0,1,0,1,2,3,5,9.52,0,0,,, -tSH_cSH_GGU,0,0,0,1,2,2,2,0,0,0,,, -tSH_cSH_GUA,0,3,0,1,2,2,2,20,12.2,0,,, -tSH_cSH_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -tSH_cSH_GUU,0,3,0,1,1,1,1,20.62,12.66,0,,, -tSH_cSH_UAA,0,8,0,1,2,4,5,60.61,49.38,25.64,,, -tSH_cSH_UAC,0,5,0,1,2,3,3,30.93,37.97,27.03,,, -tSH_cSH_UAG,0,11,0,1,1,2,2,30.3,37.04,25,,, -tSH_cSH_UAU,0,5,0,1,1,2,2,41.67,51.28,27.78,,, -tSH_cSH_UCA,0,1,0,1,2,3,3,10.31,0,0,,, -tSH_cSH_UCC,0,3,0,1,2,3,3,31.58,38.96,57.14,,, -tSH_cSH_UCU,0,15,0,1,1,3,3,148.94,118.42,0,,, -tSH_cSS_AAA,0,5,0,1,1,2,2,9.9,0,0,,, -tSH_cSS_AAC,5,0,1,1,1,2,4,0,0,0,,, -tSH_cSS_AAG,1,0,1,1,2,3,5,0,0,0,,, -tSH_cSS_AAU,0,0,0,1,1,5,5,0,0,0,,, -tSH_cSS_ACA,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_ACC,0,0,0,1,1,2,2,0,0,0,,, -tSH_cSS_ACG,0,1,0,1,2,4,4,0,0,0,,, -tSH_cSS_ACU,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_AUA,0,3,1,1,0,2,2,20.2,12.35,0,,, -tSH_cSS_AUC,0,0,0,1,0,1,1,0,0,0,,, -tSH_cSS_AUG,0,0,0,1,1,3,3,0,0,0,,, -tSH_cSS_AUU,0,3,0,1,0,0,0,20.83,12.82,0,,, -tSH_cSS_CAA,0,5,0,1,1,2,2,10.1,0,0,,, -tSH_cSS_CAC,2,0,0,1,1,2,2,0,0,0,,, -tSH_cSS_CAG,1,0,1,1,2,3,3,0,0,0,,, -tSH_cSS_CAU,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_CCA,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_CCC,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_CCG,0,1,0,1,2,4,4,0,0,0,,, -tSH_cSS_CCU,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_GAA,6,0,6,1,2,3,6,0,0,0,,, -tSH_cSS_GAC,69,0,8,1,2,3,5,0,0,0,,, -tSH_cSS_GAG,25,0,2,1,3,4,5,0,0,0,,, -tSH_cSS_GAU,7,0,1,1,2,5,5,0,0,0,,, -tSH_cSS_GGA,0,0,0,1,1,3,3,0,0,0,,, -tSH_cSS_GGC,0,0,0,1,1,3,3,0,0,0,,, -tSH_cSS_GGG,0,0,0,1,1,2,4,0,0,0,,, -tSH_cSS_GGU,0,0,0,1,1,1,1,0,0,0,,, -tSH_cSS_GUA,0,3,1,1,1,3,3,20,12.2,0,,, -tSH_cSS_GUC,0,0,0,1,1,2,2,0,0,0,,, -tSH_cSS_GUG,0,3,2,1,2,3,3,19.8,12.05,0,,, -tSH_cSS_GUU,0,3,0,1,1,1,1,20.62,12.66,0,,, -tSH_cSS_UAA,0,9,0,1,1,2,2,40.82,37.5,25.64,,, -tSH_cSS_UAC,8,0,5,1,1,2,3,0,12.66,27.03,,, -tSH_cSS_UAG,0,9,0,1,2,3,3,40.4,37.04,25,,, -tSH_cSS_UAU,0,5,1,1,1,6,6,41.67,51.28,27.78,,, -tSH_cSS_UCA,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSS_UCC,0,0,1,1,1,4,4,0,0,0,,, -tSH_cSS_UCG,0,1,0,1,2,4,4,0,0,0,,, -tSH_cSS_UCU,0,0,0,1,1,4,4,0,0,0,,, -tSH_cSW_AAA,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSW_AAC,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSW_AAG,0,2,0,1,1,2,2,19.42,0,0,,, -tSH_cSW_AAU,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_ACA,0,14,0,1,2,3,3,130,109.76,0,,, -tSH_cSW_ACC,0,14,0,1,2,3,3,132.65,112.5,0,,, -tSH_cSW_ACG,0,14,0,1,3,4,4,128.71,108.43,0,,, -tSH_cSW_ACU,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_AUA,0,3,0,1,1,1,1,20.2,12.35,0,,, -tSH_cSW_AUC,0,3,0,1,1,1,1,20.62,12.66,0,,, -tSH_cSW_AUG,0,1,0,1,2,2,3,10,0,0,,, -tSH_cSW_AUU,0,0,0,1,1,1,1,0,0,0,,, -tSH_cSW_CAA,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSW_CAC,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSW_CAG,0,2,0,1,1,2,2,19.8,0,0,,, -tSH_cSW_CAU,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_CCA,0,14,0,1,2,3,3,132.65,112.5,0,,, -tSH_cSW_CCC,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_CCG,0,14,0,1,3,4,4,131.31,111.11,0,,, -tSH_cSW_CCU,0,0,0,1,2,0,3,0,0,0,,, -tSH_cSW_GAA,0,0,0,1,3,5,5,0,0,0,,, -tSH_cSW_GAC,0,0,0,1,3,5,5,0,0,0,,, -tSH_cSW_GAG,0,2,0,1,2,3,3,19.23,0,0,,, -tSH_cSW_GAU,2,0,0,1,3,5,4,0,0,0,,, -tSH_cSW_GGA,0,1,0,1,1,1,1,0,0,0,,, -tSH_cSW_GGC,0,1,0,1,2,2,2,0,0,0,,, -tSH_cSW_GGG,0,0,0,1,2,2,2,0,0,0,,, -tSH_cSW_GGU,0,1,0,1,3,3,3,9.9,12.05,0,,, -tSH_cSW_GUA,0,3,0,1,2,2,2,20,12.2,0,,, -tSH_cSW_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -tSH_cSW_GUG,0,5,0,1,3,3,4,29.7,12.05,0,,, -tSH_cSW_GUU,0,0,0,1,2,3,3,0,0,0,,, -tSH_cSW_UAA,0,4,0,1,2,3,3,30.3,37.04,25.64,,, -tSH_cSW_UAC,1,2,1,1,2,3,4,20.62,25.32,27.03,,, -tSH_cSW_UAG,0,7,0,1,1,2,2,50,36.59,25,,, -tSH_cSW_UAU,0,7,0,1,2,3,3,62.5,76.92,27.78,,, -tSH_cSW_UCA,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_UCC,0,0,0,1,2,4,4,0,0,0,,, -tSH_cSW_UCG,0,0,0,1,3,4,4,0,0,0,,, -tSH_cSW_UCU,0,0,0,1,2,0,3,0,0,0,,, -tSH_tSH_AAA,0,1,0,1,2,3,3,0,0,0,,, -tSH_tSH_AAC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_AAU,0,0,0,1,1,2,2,0,0,0,,, -tSH_tSH_ACA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_ACC,0,14,0,1,2,3,3,132.65,112.5,0,,, -tSH_tSH_AUA,0,8,0,1,1,1,1,60.61,61.73,25.64,,, -tSH_tSH_AUC,0,3,0,1,1,1,1,20.62,12.66,0,,, -tSH_tSH_CAA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_CAC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tSH_tSH_CCA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_CCC,0,9,0,1,2,0,3,135.42,115.38,0,,, -tSH_tSH_GAA,0,0,0,1,3,4,4,0,0,0,,, -tSH_tSH_GAC,0,0,0,1,3,4,5,0,0,0,,, -tSH_tSH_GAU,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_GGA,0,1,0,1,3,3,3,0,0,0,,, -tSH_tSH_GGG,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSH_GGU,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSH_GUA,0,8,0,1,2,2,2,60,60.98,25,,, -tSH_tSH_GUC,0,3,0,1,2,2,2,20.41,12.5,0,,, -tSH_tSH_UAA,0,4,0,1,2,3,3,30.3,37.04,25.64,,, -tSH_tSH_UAC,0,4,0,1,2,3,3,30.93,37.97,27.03,,, -tSH_tSH_UAU,0,5,0,1,1,2,2,41.67,51.28,27.78,,, -tSH_tSH_UCA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSH_UCC,0,14,0,1,2,0,3,136.84,116.88,0,,, -tSH_tSS_AAA,0,0,0,1,1,4,4,0,0,0,,, -tSH_tSS_AAC,0,0,0,1,1,3,3,0,0,0,,, -tSH_tSS_AAG,5,0,1,1,2,5,4,0,0,23.26,,, -tSH_tSS_AAU,0,1,0,1,1,3,3,0,0,0,,, -tSH_tSS_CAA,0,0,0,1,1,3,3,0,0,0,,, -tSH_tSS_CAC,1,0,1,1,1,3,3,0,0,0,,, -tSH_tSS_CAG,2,0,0,1,2,4,4,0,0,24.39,,, -tSH_tSS_CAU,1,0,0,1,1,3,3,0,0,0,,, -tSH_tSS_GAA,3,0,3,1,2,4,4,0,0,0,,, -tSH_tSS_GAC,17,0,2,1,2,4,5,0,0,0,,, -tSH_tSS_GAG,73,0,18,1,3,5,5,0,0,22.73,,, -tSH_tSS_GAU,2,8,0,1,2,4,4,60,73.17,0,,, -tSH_tSS_GGA,0,3,0,1,1,1,1,9.62,0,0,,, -tSH_tSS_GGC,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSS_GGG,0,0,0,1,3,5,5,0,0,0,,, -tSH_tSS_GGU,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSS_UAA,0,5,0,1,1,4,4,40.4,49.38,25.64,,, -tSH_tSS_UAC,0,5,0,1,1,3,3,41.24,50.63,27.03,,, -tSH_tSS_UAG,14,0,6,1,2,5,3,0,0,50,,, -tSH_tSS_UAU,0,6,0,1,1,4,4,41.67,51.28,27.78,,, -tSH_tSW_AAA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_AAC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_AAU,0,1,0,1,2,3,3,0,0,0,,, -tSH_tSW_ACA,0,14,0,1,2,3,3,130,109.76,0,,, -tSH_tSW_ACC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_ACG,0,0,0,1,3,5,5,0,0,0,,, -tSH_tSW_ACU,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_AUA,0,0,0,1,1,1,1,0,0,0,,, -tSH_tSW_AUC,0,0,0,1,1,1,1,0,0,0,,, -tSH_tSW_AUG,0,3,0,1,2,2,2,20,12.2,0,,, -tSH_tSW_AUU,0,4,0,1,1,1,1,31.25,38.46,0,,, -tSH_tSW_CAA,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_CAU,0,2,0,1,2,3,3,20.83,25.64,0,,, -tSH_tSW_CCA,0,14,0,1,2,3,3,132.65,112.5,0,,, -tSH_tSW_CCC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_CCG,0,0,0,1,3,5,5,0,0,0,,, -tSH_tSW_CCU,0,0,0,1,2,4,4,0,0,0,,, -tSH_tSW_GAA,0,0,0,1,3,4,4,0,0,0,,, -tSH_tSW_GAC,0,0,0,1,3,4,4,0,0,0,,, -tSH_tSW_GAU,0,1,0,1,3,5,5,10,12.2,0,,, -tSH_tSW_GGA,0,0,0,1,3,4,4,0,0,0,,, -tSH_tSW_GGC,0,2,0,1,3,4,4,9.8,11.9,0,,, -tSH_tSW_GGU,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSW_GUA,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSW_GUC,0,0,0,1,2,2,2,0,0,0,,, -tSH_tSW_GUG,0,3,0,1,3,3,3,19.8,12.05,0,,, -tSH_tSW_GUU,0,4,0,1,2,2,2,30.93,37.97,0,,, -tSH_tSW_UAA,0,5,0,1,2,4,4,40.4,49.38,25.64,,, -tSH_tSW_UAC,0,4,0,1,2,3,3,30.93,37.97,27.03,,, -tSH_tSW_UAU,0,11,0,1,2,3,3,42.11,51.95,27.78,,, -tSH_tSW_UCA,0,14,0,1,2,3,3,134.02,113.92,0,,, -tSH_tSW_UCC,0,0,0,1,2,3,3,0,0,0,,, -tSH_tSW_UCG,0,0,0,1,3,5,5,0,0,0,,, -tSH_tSW_UCU,0,0,0,1,2,4,4,0,0,0,,, -tSW_cHH_AAG,0,4,0,1,2,3,3,29.13,35.29,0,,, -tSW_cHH_ACG,0,34,0,1,1,1,1,0,0,0,,, -tSW_cHH_CAG,0,49,0,1,2,6,3,61.86,75.95,97.56,,, -tSW_cHH_CCG,0,29,0,1,1,1,1,202.02,148.15,0,,, -tSW_cHH_CGA,0,3,0,1,3,4,4,39.6,48.19,24.39,,, -tSW_cHH_CGC,0,1,0,1,2,3,3,10.1,12.35,25.64,,, -tSW_cHH_CGG,0,15,0,1,2,3,4,148.51,119.05,23.81,,, -tSW_cHH_GAG,0,47,0,1,3,3,4,147.06,83.33,68.18,,, -tSW_cHH_GCG,0,37,0,1,2,2,2,0,0,0,,, -tSW_cHH_UAG,0,19,0,1,2,3,3,91.84,100,0,,, -tSW_cHH_UCG,0,29,0,1,1,1,1,204.08,150,0,,, -tSW_cHH_UGA,0,1,0,1,4,7,7,10,12.2,0,,, -tSW_cHH_UGC,0,1,0,1,2,2,2,10.31,12.5,0,,, -tSW_cHH_UGG,0,0,0,1,2,3,4,0,0,0,,, -tSW_cHS_AAA,0,4,0,1,2,4,6,39.6,23.81,0,,, -tSW_cHS_AAC,0,0,0,1,2,2,2,0,0,0,,, -tSW_cHS_AAG,0,1,0,1,2,3,4,9.8,11.76,23.26,,, -tSW_cHS_AAU,0,0,0,1,2,4,4,0,0,0,,, -tSW_cHS_ACA,0,5,0,1,2,2,2,50.51,60.98,0,,, -tSW_cHS_ACC,0,12,0,1,2,2,2,83.33,101.27,52.63,,, -tSW_cHS_ACG,0,51,0,1,2,6,6,51.55,63.29,0,,, -tSW_cHS_ACU,0,4,0,1,2,2,2,0,0,0,,, -tSW_cHS_AUA,0,30,0,1,1,1,1,10.31,12.66,0,,, -tSW_cHS_AUC,0,10,0,1,1,2,2,21.05,0,0,,, -tSW_cHS_AUG,0,5,0,1,2,2,3,0,0,0,,, -tSW_cHS_AUU,0,0,0,1,1,2,2,0,0,0,,, -tSW_cHS_CAA,0,25,0,1,3,5,6,111.11,73.17,0,,, -tSW_cHS_CAC,0,11,0,1,2,6,6,82.47,75,0,,, -tSW_cHS_CAG,0,1,0,1,2,3,4,10,12.05,24.39,,, -tSW_cHS_CAU,0,37,0,1,2,3,3,85.11,92.11,0,,, -tSW_cHS_CCA,0,0,0,1,2,3,3,0,0,0,,, -tSW_cHS_CCC,0,7,0,1,2,2,2,73.68,89.74,55.56,,, -tSW_cHS_CCG,0,17,0,1,2,4,4,141.41,172.84,76.92,,, -tSW_cHS_CCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_cHS_CGA,0,2,0,1,2,5,5,10,0,0,,, -tSW_cHS_CGG,0,0,0,1,3,4,4,0,0,0,,, -tSW_cHS_CUA,0,3,0,1,1,2,2,20.62,25.32,0,,, -tSW_cHS_CUC,0,4,0,1,0,3,3,43.01,0,0,,, -tSW_cHS_CUG,0,14,0,1,2,2,3,134.02,112.5,0,,, -tSW_cHS_CUU,0,2,0,1,1,3,3,0,0,0,,, -tSW_cHS_GAA,0,27,0,1,4,5,6,79.21,47.62,0,,, -tSW_cHS_GAC,0,1,0,1,3,7,7,0,0,0,,, -tSW_cHS_GAG,0,1,0,1,3,4,4,9.62,11.63,22.73,,, -tSW_cHS_GAU,0,29,0,1,3,5,5,50.51,61.73,0,,, -tSW_cHS_GCA,0,2,0,1,3,6,6,0,0,0,,, -tSW_cHS_GCC,0,7,0,1,3,3,3,71.43,86.42,51.28,,, -tSW_cHS_GCG,0,37,0,1,2,6,3,30.3,37.04,0,,, -tSW_cHS_GCU,0,0,0,1,3,3,3,0,0,0,,, -tSW_cHS_GUA,0,0,0,1,1,1,1,0,0,0,,, -tSW_cHS_GUC,0,8,0,1,1,1,3,81.63,0,26.32,,, -tSW_cHS_GUG,0,2,0,1,2,2,2,0,12.05,24.39,,, -tSW_cHS_GUU,0,0,0,1,1,1,1,0,12.66,27.03,,, -tSW_cHS_UAA,0,8,0,1,2,4,5,71.43,61.73,0,,, -tSW_cHS_UAC,0,3,0,1,2,3,3,20.83,12.66,0,,, -tSW_cHS_UAG,0,10,0,1,2,3,4,100,12.2,25,,, -tSW_cHS_UAU,0,10,0,1,2,4,4,104.17,128.21,0,,, -tSW_cHS_UCA,0,0,0,1,2,3,3,0,0,0,,, -tSW_cHS_UCC,0,7,0,1,2,2,2,74.47,90.91,57.14,,, -tSW_cHS_UCG,0,17,0,1,2,7,7,153.06,187.5,78.95,,, -tSW_cHS_UCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_cHS_UGA,0,2,0,1,2,5,5,10.1,0,0,,, -tSW_cHS_UGG,0,0,0,1,3,4,4,0,0,0,,, -tSW_cHS_UUA,0,3,0,1,1,1,1,20.83,12.82,0,,, -tSW_cHS_UUC,0,15,0,1,1,1,1,148.94,52.63,0,,, -tSW_cHS_UUG,0,22,0,1,2,3,3,61.86,50.63,0,,, -tSW_cHS_UUU,0,13,0,1,1,1,2,139.78,53.33,0,,, -tSW_cHW_AAG,0,2,0,1,3,4,4,9.71,11.76,0,,, -tSW_cHW_AAU,0,0,0,1,3,3,3,0,0,0,,, -tSW_cHW_ACC,0,4,0,1,3,4,4,0,0,0,,, -tSW_cHW_AUA,0,5,0,1,2,2,2,10.2,0,0,,, -tSW_cHW_AUC,0,5,0,1,2,2,2,0,0,0,,, -tSW_cHW_AUU,0,13,0,1,2,4,4,114.58,141.03,0,,, -tSW_cHW_CAG,0,9,0,1,3,5,5,69.31,84.34,0,,, -tSW_cHW_CAU,0,1,0,1,3,5,5,0,0,0,,, -tSW_cHW_CCC,0,7,0,1,3,4,4,52.08,64.1,0,,, -tSW_cHW_CGA,0,1,0,1,3,4,4,9.9,12.05,24.39,,, -tSW_cHW_CGC,0,0,0,1,3,4,4,0,0,0,,, -tSW_cHW_CGG,0,2,0,1,4,6,6,19.61,23.81,0,,, -tSW_cHW_CGU,0,0,0,1,3,4,4,0,0,0,,, -tSW_cHW_CUA,0,0,0,1,2,5,5,0,0,0,,, -tSW_cHW_CUC,0,14,0,1,2,2,2,136.84,116.88,0,,, -tSW_cHW_CUU,0,0,0,1,2,3,3,0,0,0,,, -tSW_cHW_GAG,0,5,0,1,4,5,5,48.08,46.51,0,,, -tSW_cHW_GAU,0,0,0,1,4,5,5,0,0,0,,, -tSW_cHW_GCC,0,3,0,1,3,6,6,20.2,24.69,0,,, -tSW_cHW_GUA,0,0,0,1,2,2,2,0,0,0,,, -tSW_cHW_GUC,0,0,0,1,2,2,2,0,12.5,26.32,,, -tSW_cHW_GUU,0,0,0,1,2,2,2,10.31,12.66,27.03,,, -tSW_cHW_UAG,0,3,0,1,3,6,6,20,12.2,0,,, -tSW_cHW_UAU,0,0,0,1,3,3,3,0,0,0,,, -tSW_cHW_UCC,0,7,0,1,3,4,4,52.63,64.94,0,,, -tSW_cHW_UGA,0,1,0,1,3,3,4,10,12.2,25,,, -tSW_cHW_UGC,0,0,0,1,3,3,4,0,0,0,,, -tSW_cHW_UGG,0,0,0,1,4,6,6,0,0,0,,, -tSW_cHW_UGU,0,0,0,1,3,4,4,0,0,0,,, -tSW_cHW_UUA,0,4,0,1,2,2,2,41.67,51.28,0,,, -tSW_cHW_UUC,0,4,0,1,2,0,2,42.55,52.63,0,,, -tSW_cHW_UUU,0,4,0,1,2,2,2,43.01,53.33,0,,, -tSW_cSH_AAA,0,2,0,1,2,3,4,29.41,11.9,0,,, -tSW_cSH_AAC,0,2,0,1,2,2,2,0,0,0,,, -tSW_cSH_AAG,0,5,0,1,1,1,1,0,0,0,,, -tSW_cSH_AAU,0,1,0,1,1,1,1,0,0,0,,, -tSW_cSH_ACA,0,1,0,1,2,2,2,10,0,0,,, -tSW_cSH_ACC,0,3,0,1,2,2,2,30.61,37.5,52.63,,, -tSW_cSH_ACU,0,0,0,1,1,2,2,0,0,0,,, -tSW_cSH_AUA,0,3,0,1,2,3,3,20.2,12.35,0,,, -tSW_cSH_AUC,0,3,0,1,2,3,3,20.62,12.66,0,,, -tSW_cSH_AUU,0,3,0,1,1,2,2,20.83,12.82,0,,, -tSW_cSH_CAA,0,4,0,1,2,4,5,30,12.2,0,,, -tSW_cSH_CAC,0,1,0,1,2,3,3,0,0,0,,, -tSW_cSH_CAG,0,7,0,1,1,2,2,0,0,0,,, -tSW_cSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tSW_cSH_CCA,0,1,0,1,2,2,2,10.2,0,0,,, -tSW_cSH_CCC,0,3,0,1,2,2,2,31.25,38.46,55.56,,, -tSW_cSH_CCU,0,15,0,1,1,2,2,147.37,116.88,0,,, -tSW_cSH_CGA,0,1,0,1,3,4,4,9.9,12.05,24.39,,, -tSW_cSH_CGC,0,1,0,1,2,3,3,0,0,25.64,,, -tSW_cSH_CGG,0,3,0,1,3,5,7,29.41,0,0,,, -tSW_cSH_CGU,0,0,0,1,3,4,4,0,0,26.32,,, -tSW_cSH_CUA,0,3,0,1,2,4,4,20.62,12.66,0,,, -tSW_cSH_CUC,0,3,1,1,2,4,4,21.05,12.99,0,,, -tSW_cSH_CUU,0,3,0,1,1,3,3,21.28,13.16,0,,, -tSW_cSH_GAA,0,4,0,1,3,4,5,29.13,11.76,0,,, -tSW_cSH_GAC,3,5,2,1,3,3,2,20,24.1,0,,, -tSW_cSH_GAG,0,7,0,1,2,2,2,0,0,0,,, -tSW_cSH_GAU,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSH_GCA,0,1,0,1,3,3,3,9.9,0,0,,, -tSW_cSH_GCC,0,3,0,1,3,3,3,30.3,37.04,51.28,,, -tSW_cSH_GCU,0,15,0,1,2,3,3,142.86,112.5,0,,, -tSW_cSH_GUA,0,9,0,1,3,3,3,50,48.78,75,,, -tSW_cSH_GUC,0,9,0,1,0,0,0,20.83,12.82,0,,, -tSW_cSH_GUU,0,11,0,1,1,1,1,20.83,12.82,27.78,,, -tSW_cSH_UAA,0,4,0,1,2,3,4,30.3,12.35,0,,, -tSW_cSH_UAC,0,1,0,1,2,2,2,0,0,0,,, -tSW_cSH_UAG,0,7,0,1,1,1,1,0,0,0,,, -tSW_cSH_UAU,0,0,0,1,1,1,1,0,0,0,,, -tSW_cSH_UCA,0,1,0,1,2,2,2,10.31,0,0,,, -tSW_cSH_UCC,0,3,0,1,2,2,2,31.58,38.96,57.14,,, -tSW_cSH_UCU,0,15,0,1,1,2,2,148.94,118.42,0,,, -tSW_cSH_UGA,0,1,0,1,3,4,4,10,12.2,25,,, -tSW_cSH_UGG,0,10,0,1,3,5,6,108.91,96.39,0,,, -tSW_cSH_UGU,0,0,0,1,3,4,4,0,0,0,,, -tSW_cSH_UUA,0,4,0,1,2,2,2,41.67,51.28,0,,, -tSW_cSH_UUC,0,7,0,1,3,3,3,42.55,39.47,58.82,,, -tSW_cSH_UUU,0,3,0,1,2,2,2,21.51,13.33,0,,, -tSW_cSS_AAA,0,5,0,1,1,1,1,9.9,0,0,,, -tSW_cSS_AAC,0,5,0,1,1,1,1,0,0,0,,, -tSW_cSS_AAG,0,5,0,1,2,2,2,9.8,0,0,,, -tSW_cSS_AAU,0,1,0,1,1,1,1,10.31,12.66,0,,, -tSW_cSS_ACA,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_ACC,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_ACG,0,1,0,1,2,3,3,0,0,0,,, -tSW_cSS_ACU,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_AUA,0,3,0,1,1,4,4,20.2,12.35,0,,, -tSW_cSS_AUC,4,0,0,1,1,3,5,0,0,0,,, -tSW_cSS_AUG,0,3,0,1,2,4,4,20,12.2,0,,, -tSW_cSS_AUU,0,3,0,1,1,2,2,20.83,12.82,0,,, -tSW_cSS_CAA,0,5,0,1,1,2,2,10.1,0,0,,, -tSW_cSS_CAC,0,6,0,1,1,2,2,0,0,0,,, -tSW_cSS_CAG,0,5,1,1,2,3,3,10,0,0,,, -tSW_cSS_CAU,0,1,0,1,1,5,5,0,0,0,,, -tSW_cSS_CCA,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_CCC,0,0,0,1,1,1,1,0,0,0,,, -tSW_cSS_CCG,0,1,0,1,2,3,3,0,0,0,,, -tSW_cSS_CCU,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_CGA,0,0,0,1,2,5,5,0,0,24.39,,, -tSW_cSS_CGC,0,0,0,1,2,6,6,0,0,25.64,,, -tSW_cSS_CGG,0,0,0,1,2,4,6,0,0,23.81,,, -tSW_cSS_CGU,0,0,0,1,2,3,3,0,0,26.32,,, -tSW_cSS_CUA,0,3,0,1,1,5,5,20.62,12.66,0,,, -tSW_cSS_CUC,0,0,0,1,1,0,4,0,0,0,,, -tSW_cSS_CUG,0,0,0,1,2,6,6,0,0,0,,, -tSW_cSS_CUU,0,3,0,1,1,3,3,21.28,13.16,0,,, -tSW_cSS_GAA,0,5,0,1,2,2,2,9.8,0,0,,, -tSW_cSS_GAC,0,6,0,1,2,2,2,0,0,0,,, -tSW_cSS_GAG,0,5,0,1,3,3,3,9.71,0,0,,, -tSW_cSS_GAU,0,0,0,1,2,5,5,0,0,0,,, -tSW_cSS_GCA,0,0,0,1,2,4,4,0,0,0,,, -tSW_cSS_GCC,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSS_GCG,0,1,0,1,3,4,4,0,0,0,,, -tSW_cSS_GCU,0,0,0,1,2,4,4,0,0,0,,, -tSW_cSS_GUA,0,8,0,1,2,4,4,50,48.78,75,,, -tSW_cSS_GUC,1,0,0,1,4,6,6,0,0,0,,, -tSW_cSS_GUG,0,7,0,1,2,3,3,20.62,12.66,0,,, -tSW_cSS_GUU,0,3,0,1,2,2,2,20.62,12.66,0,,, -tSW_cSS_UAA,0,5,0,1,1,1,1,10.2,0,0,,, -tSW_cSS_UAC,0,6,0,1,1,1,1,0,0,0,,, -tSW_cSS_UAG,0,5,0,1,2,2,2,10.1,0,0,,, -tSW_cSS_UAU,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_UCA,0,0,0,1,1,3,3,0,0,0,,, -tSW_cSS_UCC,0,0,0,1,1,1,1,0,0,0,,, -tSW_cSS_UCG,0,1,0,1,2,3,3,0,0,0,,, -tSW_cSS_UCU,0,0,0,1,1,0,3,0,0,0,,, -tSW_cSS_UGA,0,0,0,1,2,5,5,0,0,0,,, -tSW_cSS_UGC,0,0,0,1,2,6,6,0,0,0,,, -tSW_cSS_UGG,0,0,0,1,2,4,6,0,0,0,,, -tSW_cSS_UGU,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSS_UUA,0,3,1,1,1,3,3,20.83,12.82,0,,, -tSW_cSS_UUC,0,4,0,1,1,2,2,42.55,52.63,0,,, -tSW_cSS_UUG,0,4,0,1,2,3,3,41.24,50.63,0,,, -tSW_cSS_UUU,0,4,0,1,1,0,2,43.01,53.33,0,,, -tSW_cSW_AAA,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSW_AAC,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSW_AAG,0,2,0,1,1,1,1,19.42,0,0,,, -tSW_cSW_AAU,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_ACA,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSW_ACC,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_ACG,0,0,0,1,3,3,3,0,0,0,,, -tSW_cSW_ACU,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_AUA,0,3,0,1,2,3,3,20.2,12.35,0,,, -tSW_cSW_AUC,0,3,0,1,2,3,3,20.62,12.66,0,,, -tSW_cSW_AUG,0,16,0,1,4,5,6,30,12.2,0,,, -tSW_cSW_AUU,0,3,0,1,2,4,4,31.25,38.46,83.33,,, -tSW_cSW_CAA,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_CAC,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_CAG,0,2,0,1,1,2,2,19.8,0,0,,, -tSW_cSW_CAU,0,1,0,1,2,4,4,10.31,12.66,0,,, -tSW_cSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -tSW_cSW_CCC,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_CCG,0,0,0,1,3,3,3,0,0,0,,, -tSW_cSW_CCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSW_CGA,0,1,0,1,2,3,3,0,0,24.39,,, -tSW_cSW_CGC,0,1,0,1,3,4,4,0,0,0,,, -tSW_cSW_CGG,0,0,0,1,3,4,4,0,0,23.81,,, -tSW_cSW_CGU,0,1,0,1,4,6,6,10.2,12.5,0,,, -tSW_cSW_CUA,1,0,1,1,2,4,7,0,0,0,,, -tSW_cSW_CUC,0,3,0,1,2,4,4,21.05,12.99,0,,, -tSW_cSW_CUG,0,13,0,1,4,6,7,61.22,50,78.95,,, -tSW_cSW_CUU,0,0,0,1,2,5,5,0,0,0,,, -tSW_cSW_GAA,1,6,0,1,3,3,4,58.25,35.29,0,,, -tSW_cSW_GAC,0,0,0,1,3,3,3,0,0,0,,, -tSW_cSW_GAG,0,2,0,1,2,2,2,19.23,0,0,,, -tSW_cSW_GAU,0,1,0,1,3,4,4,10,12.2,0,,, -tSW_cSW_GCA,0,14,0,1,3,3,3,128.71,108.43,0,,, -tSW_cSW_GCC,0,14,0,1,3,3,3,131.31,111.11,0,,, -tSW_cSW_GCG,0,14,0,1,5,5,5,127.45,107.14,0,,, -tSW_cSW_GCU,0,0,0,1,4,5,5,0,0,0,,, -tSW_cSW_GUA,0,8,0,1,1,1,1,20.83,12.82,0,,, -tSW_cSW_GUC,0,7,0,1,2,2,2,20.83,12.82,0,,, -tSW_cSW_GUG,0,43,0,1,3,3,3,30.3,24.69,25.64,,, -tSW_cSW_GUU,0,11,0,1,0,1,1,10.53,12.99,28.57,,, -tSW_cSW_UAA,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_UAC,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_UAG,0,2,0,1,1,1,1,20,0,0,,, -tSW_cSW_UAU,0,0,0,1,2,3,3,0,0,0,,, -tSW_cSW_UCA,0,14,0,1,2,2,2,134.02,113.92,0,,, -tSW_cSW_UCC,0,0,0,1,2,0,3,0,0,0,,, -tSW_cSW_UCG,0,0,0,1,3,3,3,0,0,0,,, -tSW_cSW_UCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_cSW_UGA,0,1,0,1,2,3,3,0,0,0,,, -tSW_cSW_UGC,0,1,0,1,3,4,4,0,0,0,,, -tSW_cSW_UGG,0,0,0,1,3,4,4,0,0,0,,, -tSW_cSW_UGU,0,14,0,1,4,5,5,31.25,38.46,0,,, -tSW_cSW_UUA,0,4,0,1,2,2,2,41.67,51.28,0,,, -tSW_cSW_UUC,0,4,0,1,2,3,3,42.55,52.63,0,,, -tSW_cSW_UUG,0,23,0,1,4,4,2,0,0,0,,, -tSW_cSW_UUU,0,13,0,1,3,3,3,129.03,160,242.42,,, -tSW_tHH_AAA,0,0,0,1,3,4,4,0,0,0,,, -tSW_tHH_AAC,0,2,0,1,2,3,3,10,12.2,0,,, -tSW_tHH_AAG,0,0,0,1,2,2,2,0,0,0,,, -tSW_tHH_AAU,0,1,0,1,2,2,2,0,0,0,,, -tSW_tHH_ACA,0,10,0,1,2,2,2,50.51,61.73,0,,, -tSW_tHH_ACG,0,77,0,1,2,2,4,60.61,37.04,48.78,,, -tSW_tHH_ACU,0,28,0,1,2,3,3,62.5,64.1,0,,, -tSW_tHH_AUA,0,15,0,1,2,4,4,102.04,125,0,,, -tSW_tHH_AUC,0,21,0,1,2,3,3,83.33,0,0,,, -tSW_tHH_CAA,0,99,0,1,3,4,6,30.61,0,0,,, -tSW_tHH_CAC,0,4,0,1,2,5,6,40.82,25,0,,, -tSW_tHH_CAG,0,55,0,1,3,3,5,108.91,36.14,0,,, -tSW_tHH_CAU,0,69,0,1,2,4,4,82.47,25.32,0,,, -tSW_tHH_CCA,0,12,0,1,2,3,4,122.45,150,0,,, -tSW_tHH_CCG,0,0,0,1,2,3,4,0,0,0,,, -tSW_tHH_CCU,0,13,0,1,2,2,2,136.84,116.88,0,,, -tSW_tHH_CGA,0,52,0,1,3,4,4,118.81,144.58,0,,, -tSW_tHH_CGC,0,0,0,1,3,4,5,0,0,0,,, -tSW_tHH_CGG,0,15,0,1,2,4,6,107.84,71.43,0,,, -tSW_tHH_CUA,0,2,0,1,2,3,3,10.31,0,0,,, -tSW_tHH_CUC,0,0,0,1,2,3,3,0,0,0,,, -tSW_tHH_GAA,0,96,0,1,4,6,9,79.21,96.39,0,,, -tSW_tHH_GAC,0,8,0,1,3,4,5,69.31,48.19,0,,, -tSW_tHH_GAG,0,5,0,1,4,5,6,38.46,46.51,0,,, -tSW_tHH_GAU,0,51,0,1,3,4,4,80,0,25,,, -tSW_tHH_GCA,0,0,0,1,3,4,4,0,0,0,,, -tSW_tHH_GCG,0,8,0,1,3,5,5,78.43,95.24,0,,, -tSW_tHH_GCU,0,0,0,1,3,3,3,0,0,0,,, -tSW_tHH_GUA,0,0,0,1,2,3,3,10,12.2,25,,, -tSW_tHH_GUC,0,0,0,1,2,3,3,0,0,26.32,,, -tSW_tHH_UAA,0,8,0,1,3,7,7,60.61,61.73,0,,, -tSW_tHH_UAC,0,3,0,1,2,4,4,20.62,25.32,0,,, -tSW_tHH_UAG,0,9,0,1,2,3,4,90,109.76,0,,, -tSW_tHH_UAU,0,19,0,1,2,4,4,166.67,192.31,0,,, -tSW_tHH_UCA,0,8,0,1,2,4,4,82.47,101.27,0,,, -tSW_tHH_UCG,0,1,0,1,2,3,4,10.2,12.5,0,,, -tSW_tHH_UCU,0,0,0,1,2,0,2,0,0,0,,, -tSW_tHH_UGA,0,10,0,1,3,8,9,100,85.37,0,,, -tSW_tHH_UGC,0,0,0,1,3,3,4,0,0,0,,, -tSW_tHH_UGG,0,8,0,1,2,6,7,69.31,72.29,0,,, -tSW_tHH_UUA,0,0,0,1,2,3,3,0,0,0,,, -tSW_tHH_UUC,0,0,0,1,2,3,3,0,0,0,,, -tSW_tHS_AAA,0,65,0,1,2,1,1,58.82,83.33,0,,, -tSW_tHS_AAC,0,11,0,1,2,5,5,100,121.95,0,,, -tSW_tHS_AAG,0,73,0,1,3,5,5,77.67,70.59,0,,, -tSW_tHS_AAU,0,28,0,1,2,5,5,282.83,345.68,25.64,,, -tSW_tHS_ACA,0,43,0,1,2,2,2,400,341.46,0,,, -tSW_tHS_ACC,0,15,0,1,2,2,2,103.09,126.58,0,,, -tSW_tHS_ACU,0,51,0,1,2,6,2,0,0,0,,, -tSW_tHS_AUA,0,9,0,1,1,1,1,40.82,50,0,,, -tSW_tHS_AUG,0,10,0,1,2,3,3,40.4,49.38,0,,, -tSW_tHS_CAG,0,100,0,1,3,6,6,0,0,24.39,,, -tSW_tHS_CAU,0,105,0,1,2,7,7,84.21,103.9,162.16,,, -tSW_tHS_CCA,0,71,0,1,2,4,4,166.67,115.38,0,,, -tSW_tHS_CCC,0,51,0,1,2,5,6,127.66,157.89,0,,, -tSW_tHS_CCU,0,51,0,1,2,2,1,463.16,493.51,0,,, -tSW_tHS_CGG,0,14,0,1,3,5,5,137.25,130.95,23.81,,, -tSW_tHS_CUA,0,0,0,1,1,1,1,0,0,0,,, -tSW_tHS_GAA,0,81,0,1,3,7,7,9.9,12.05,23.26,,, -tSW_tHS_GAC,0,82,0,1,3,5,5,20,24.39,0,,, -tSW_tHS_GAG,0,89,0,1,4,9,9,9.8,11.9,68.18,,, -tSW_tHS_GAU,1,0,1,1,4,5,6,0,0,150,,, -tSW_tHS_GCA,0,42,0,1,3,5,5,90,109.76,0,,, -tSW_tHS_GCC,0,8,0,1,3,8,9,80.81,98.77,0,,, -tSW_tHS_GCU,0,15,0,1,3,7,8,142.86,175,0,,, -tSW_tHS_GUA,0,0,0,1,1,1,1,0,0,0,,, -tSW_tHS_GUG,1,0,0,1,2,2,3,0,0,0,,, -tSW_tHS_UAA,0,70,0,1,2,4,4,91.84,75,0,,, -tSW_tHS_UAC,0,61,0,1,2,4,3,73.68,90.91,0,,, -tSW_tHS_UAG,0,79,0,1,4,6,6,91.84,0,0,,, -tSW_tHS_UAU,0,97,0,1,3,4,4,178.95,64.94,27.78,,, -tSW_tHS_UCA,0,64,0,1,2,4,4,104.17,102.56,0,,, -tSW_tHS_UCC,0,40,0,1,2,4,4,180.85,210.53,0,,, -tSW_tHS_UCU,0,36,0,1,2,2,2,276.6,315.79,0,,, -tSW_tHS_UGG,0,13,0,1,3,7,7,108.91,108.43,0,,, -tSW_tHS_UUA,0,4,0,1,1,3,3,52.08,64.1,0,,, -tSW_tHS_UUG,0,1,0,1,2,2,2,0,0,0,,, -tSW_tHW_AAA,0,1,0,1,3,4,4,9.8,11.9,0,,, -tSW_tHW_AAC,0,6,0,1,4,4,4,50,60.98,0,,, -tSW_tHW_AAU,0,1,0,1,3,3,3,0,0,0,,, -tSW_tHW_ACC,0,13,0,1,2,2,2,72.16,88.61,0,,, -tSW_tHW_AUG,0,13,0,1,3,4,4,40.4,49.38,0,,, -tSW_tHW_AUU,0,7,0,1,2,3,3,21.05,25.97,0,,, -tSW_tHW_CAA,0,29,0,1,3,3,4,91.84,50,0,,, -tSW_tHW_CAC,0,54,0,1,4,5,6,41.67,25.32,26.32,,, -tSW_tHW_CAU,0,4,0,1,3,6,6,30.93,37.97,0,,, -tSW_tHW_CCC,0,1,0,1,2,5,5,10.42,12.82,0,,, -tSW_tHW_CGA,0,0,0,1,3,4,4,0,0,0,,, -tSW_tHW_CGC,0,4,0,1,3,5,5,40.4,37.04,0,,, -tSW_tHW_CGG,0,0,0,1,5,6,6,0,0,0,,, -tSW_tHW_CGU,0,0,0,1,3,5,5,0,0,26.32,,, -tSW_tHW_CUG,0,0,0,1,3,3,3,0,0,0,,, -tSW_tHW_CUU,0,0,0,1,2,2,2,0,0,0,,, -tSW_tHW_GAA,14,1,4,1,4,4,4,9.71,11.76,0,,, -tSW_tHW_GAC,0,55,0,1,5,5,6,49.5,36.14,24.39,,, -tSW_tHW_GAU,7,0,0,1,4,6,5,0,0,0,,, -tSW_tHW_GCC,1,0,0,1,3,6,6,0,0,0,,, -tSW_tHW_GUG,0,0,0,1,3,3,3,0,0,24.39,,, -tSW_tHW_GUU,0,0,0,1,2,2,2,0,0,0,,, -tSW_tHW_UAA,0,2,0,1,3,4,4,20.2,24.69,0,,, -tSW_tHW_UAC,0,31,0,1,4,4,4,309.28,316.46,0,,, -tSW_tHW_UAU,0,6,0,1,3,5,5,41.67,25.64,0,,, -tSW_tHW_UCC,0,3,0,1,2,2,2,21.05,12.99,0,,, -tSW_tHW_UGA,0,3,0,1,3,3,3,20,12.2,0,,, -tSW_tHW_UGC,0,0,0,1,3,5,5,0,0,0,,, -tSW_tHW_UGG,0,3,0,1,5,5,5,19.8,12.05,0,,, -tSW_tHW_UGU,0,0,0,1,3,5,5,0,0,0,,, -tSW_tHW_UUG,0,3,0,1,3,3,3,20.62,12.66,0,,, -tSW_tHW_UUU,0,4,0,1,2,2,2,43.01,53.33,0,,, -tSW_tSH_AAA,0,0,0,1,2,3,3,0,0,0,,, -tSW_tSH_AAC,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_AAU,0,0,0,1,1,1,1,0,0,0,,, -tSW_tSH_ACA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_ACC,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_AUA,0,4,0,1,2,4,4,30.3,37.04,25.64,,, -tSW_tSH_AUC,0,0,0,1,2,3,3,0,0,0,,, -tSW_tSH_CAA,0,0,0,1,2,3,3,0,0,0,,, -tSW_tSH_CAC,0,0,0,1,2,3,3,0,0,0,,, -tSW_tSH_CAU,0,0,0,1,1,2,2,0,0,0,,, -tSW_tSH_CCA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_CCC,0,14,0,1,2,2,2,135.42,115.38,0,,, -tSW_tSH_CGA,0,1,0,1,4,5,5,0,0,0,,, -tSW_tSH_CGG,0,0,0,1,3,4,5,0,0,23.81,,, -tSW_tSH_CGU,0,0,0,1,3,4,4,0,0,26.32,,, -tSW_tSH_CUA,0,4,0,1,2,4,4,30.93,37.97,27.03,,, -tSW_tSH_CUC,0,0,0,1,2,4,4,0,0,0,,, -tSW_tSH_GAA,0,0,0,1,3,4,4,0,0,0,,, -tSW_tSH_GAC,0,0,1,1,3,3,3,0,0,0,,, -tSW_tSH_GAU,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_GCA,0,0,0,1,3,3,3,0,0,0,,, -tSW_tSH_GCC,0,14,0,1,3,3,3,131.31,111.11,0,,, -tSW_tSH_GUA,0,23,0,1,2,3,3,71.43,87.5,105.26,,, -tSW_tSH_GUC,0,34,0,1,0,0,0,62.5,64.1,0,,, -tSW_tSH_UAA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_UAC,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_UAU,0,0,0,1,1,1,1,0,0,0,,, -tSW_tSH_UCA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSH_UCC,0,14,0,1,2,2,2,136.84,116.88,0,,, -tSW_tSH_UGA,0,1,0,1,4,6,6,0,0,0,,, -tSW_tSH_UGG,0,0,0,1,3,4,4,0,0,0,,, -tSW_tSH_UGU,0,0,0,1,3,4,4,0,0,0,,, -tSW_tSH_UUA,0,11,0,1,3,3,3,83.33,102.56,166.67,,, -tSW_tSH_UUC,0,8,0,1,2,0,3,74.47,92.11,205.88,,, -tSW_tSW_AAA,0,0,0,1,2,2,2,128.71,0,0,,, -tSW_tSW_AAC,0,1,0,1,2,2,2,0,0,0,,, -tSW_tSW_AAU,0,1,0,1,2,3,3,9.8,0,0,,, -tSW_tSW_ACA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSW_ACC,0,0,0,1,2,2,2,40.4,0,0,,, -tSW_tSW_ACG,0,0,0,1,3,4,4,51.55,0,0,,, -tSW_tSW_ACU,0,0,0,1,2,3,3,10.53,0,0,,, -tSW_tSW_AUA,0,0,0,1,2,3,3,10.87,0,0,,, -tSW_tSW_AUC,0,0,0,1,3,4,4,0,0,0,,, -tSW_tSW_AUG,0,9,0,1,4,5,5,0,60.98,100,,, -tSW_tSW_AUU,0,7,0,1,2,3,3,10.42,64.1,83.33,,, -tSW_tSW_CAA,0,0,0,1,,,,,,,,, -tSW_tSW_CAC,0,0,0,1,2,3,3,134.02,0,0,,, -tSW_tSW_CAU,0,4,0,1,2,4,4,0,0,0,,, -tSW_tSW_CCA,0,14,0,1,2,2,2,0,112.5,0,,, -tSW_tSW_CCC,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSW_CCG,0,0,0,1,3,4,4,100,0,25.64,,, -tSW_tSW_CCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSW_CGA,0,0,0,1,4,6,6,30.93,0,0,,, -tSW_tSW_CGC,0,0,0,1,4,6,6,83.33,0,0,,, -tSW_tSW_CGU,0,0,0,1,3,4,4,117.02,0,0,,, -tSW_tSW_CUA,0,1,0,1,2,4,4,21.28,0,0,,, -tSW_tSW_CUC,0,1,0,1,3,5,5,32.61,12.99,28.57,,, -tSW_tSW_CUG,0,1,0,1,4,6,6,0,12.5,26.32,,, -tSW_tSW_CUU,0,6,0,1,2,6,6,9.71,39.47,0,,, -tSW_tSW_GAA,0,0,0,1,3,3,3,0,0,0,,, -tSW_tSW_GAC,0,0,0,1,3,3,3,0,0,0,,, -tSW_tSW_GAU,4,0,0,1,3,4,6,40.4,0,0,,, -tSW_tSW_GCA,0,14,0,1,3,3,3,0,108.43,0,,, -tSW_tSW_GCC,0,0,2,1,3,3,3,19.8,0,0,,, -tSW_tSW_GCG,0,1,0,1,4,5,5,0,11.9,0,,, -tSW_tSW_GCU,0,0,0,1,4,4,4,0,0,0,,, -tSW_tSW_GUA,0,19,0,1,1,1,1,9.9,49.38,102.56,,, -tSW_tSW_GUC,0,23,0,1,1,1,1,0,63.29,81.08,,, -tSW_tSW_GUG,0,15,0,1,4,4,4,41.24,12.99,0,,, -tSW_tSW_GUU,0,53,0,1,2,2,2,0,0,0,,, -tSW_tSW_UAA,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSW_UAC,0,0,0,1,2,2,2,19.23,0,0,,, -tSW_tSW_UAU,0,1,0,1,2,2,2,128.71,12.82,0,,, -tSW_tSW_UCA,0,14,0,1,2,2,2,127.45,113.92,0,,, -tSW_tSW_UCC,0,0,0,1,2,2,2,90.91,0,0,,, -tSW_tSW_UCG,0,0,0,1,3,4,4,326.73,0,26.32,,, -tSW_tSW_UCU,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSW_UGA,0,17,0,1,4,6,6,10,97.56,0,,, -tSW_tSW_UGC,0,10,0,1,4,5,5,0,0,0,,, -tSW_tSW_UGU,0,4,0,1,3,4,4,0,12.66,0,,, -tSW_tSW_UUA,0,9,0,1,3,3,3,10,102.56,111.11,,, -tSW_tSW_UUC,0,12,0,1,3,0,3,0,144.74,205.88,,, -tSW_tSW_UUG,0,9,0,1,2,3,3,0,26.32,58.82,,, -tSW_tSW_UUU,0,25,0,1,2,2,2,61.86,40.54,93.75,,, -tSW_tSS_AAA,0,0,0,1,1,1,1,0,0,0,,, -tSW_tSS_AAG,0,1,0,1,1,2,2,0,11.76,0,,, -tSW_tSS_ACA,0,0,0,1,1,2,2,0,0,0,,, -tSW_tSS_ACG,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSS_AUA,0,6,0,1,1,2,3,0,12.35,0,,, -tSW_tSS_AUG,0,0,0,1,2,3,3,0,0,0,,, -tSW_tSS_CAA,0,0,0,1,1,2,3,0,0,0,,, -tSW_tSS_CAG,0,2,0,1,1,4,4,0,24.1,0,,, -tSW_tSS_CCA,0,0,0,1,1,2,2,0,0,0,,, -tSW_tSS_CCG,0,0,0,1,2,2,2,0,0,0,,, -tSW_tSS_CGA,0,2,0,1,3,4,4,60,12.05,24.39,,, -tSW_tSS_CGG,0,1,0,1,4,5,5,62.5,0,0,,, -tSW_tSS_CUA,0,6,0,1,1,3,4,0,12.66,0,,, -tSW_tSS_CUG,0,0,0,1,2,5,5,0,0,0,,, -tSW_tSS_GAA,1,0,1,1,2,2,0,132.65,0,0,,, -tSW_tSS_GAG,0,2,0,1,2,4,4,0,23.26,0,,, -tSW_tSS_GCA,0,14,0,1,2,2,2,0,108.43,0,,, -tSW_tSS_GCG,0,14,0,1,3,3,3,0,107.14,0,,, -tSW_tSS_GUA,0,14,0,1,3,8,8,0,111.11,75,,, -tSW_tSS_GUG,0,32,0,1,4,6,6,0,397.59,146.34,,, -tSW_tSS_UAA,0,0,0,1,1,2,2,0,0,0,,, -tSW_tSS_UAG,0,1,0,1,1,3,3,10.53,12.2,0,,, -tSW_tSS_UCA,0,0,0,1,1,2,2,10.2,0,0,,, -tSW_tSS_UCG,0,0,0,1,2,2,2,31.91,0,0,,, -tSW_tSS_UGA,0,2,0,1,3,4,4,0,12.2,25,,, -tSW_tSS_UGG,0,1,0,1,4,5,5,0,0,0,,, -tSW_tSS_UUA,0,5,0,1,1,2,2,0,0,0,,, -tSW_tSS_UUG,0,6,0,1,3,5,5,0,75.95,0,,, -tWH_cSH_AAA,0,4,1,1,3,4,5,29.41,11.9,0,,, -tWH_cSH_AAC,1,4,1,1,3,3,3,30.3,36.59,0,,, -tWH_cSH_AAG,0,7,0,1,2,2,2,0,0,0,,, -tWH_cSH_AAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_AGA,0,1,0,1,2,2,2,9.71,11.76,23.26,,, -tWH_cSH_AGC,0,1,0,1,1,1,2,0,0,0,,, -tWH_cSH_AGG,0,1,0,1,2,2,4,9.62,0,0,,, -tWH_cSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_CAC,0,1,0,1,3,3,3,0,0,0,,, -tWH_cSH_CAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_CCA,0,1,0,1,2,2,2,10.2,0,0,,, -tWH_cSH_CCC,0,3,0,1,2,2,2,31.25,38.46,55.56,,, -tWH_cSH_CCU,0,15,0,1,1,2,2,147.37,116.88,0,,, -tWH_cSH_CGA,0,1,0,1,2,2,2,9.9,12.05,24.39,,, -tWH_cSH_CGC,0,1,0,1,1,1,2,0,0,0,,, -tWH_cSH_CGG,0,1,0,1,2,2,4,9.8,0,0,,, -tWH_cSH_CGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_GGA,0,1,0,1,4,4,4,9.62,11.63,22.73,,, -tWH_cSH_GGC,0,4,0,1,3,3,3,0,0,0,,, -tWH_cSH_GGG,0,3,0,1,4,5,8,38.1,0,0,,, -tWH_cSH_GGU,0,2,0,1,4,4,4,19.8,0,0,,, -tWH_cSH_GUA,0,0,0,1,3,4,4,0,0,0,,, -tWH_cSH_GUC,0,3,0,1,3,3,3,20.41,12.5,0,,, -tWH_cSH_GUU,0,3,0,1,2,2,2,20.62,12.66,0,,, -tWH_cSH_UAA,0,4,0,1,3,4,5,30.3,12.35,0,,, -tWH_cSH_UAC,1,1,0,1,3,3,5,10.42,12.66,0,,, -tWH_cSH_UAG,0,7,0,1,2,2,2,0,0,0,,, -tWH_cSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSH_UGA,0,1,0,1,2,3,3,10,12.2,25,,, -tWH_cSH_UGC,0,4,0,1,1,2,2,30.61,0,0,,, -tWH_cSH_UGG,0,2,0,1,2,4,6,9.9,0,0,,, -tWH_cSH_UGU,0,2,0,1,2,3,3,20.62,0,0,,, -tWH_cSH_UUA,0,0,0,1,2,3,3,0,0,0,,, -tWH_cSH_UUC,0,3,0,1,2,0,2,21.28,13.16,0,,, -tWH_cSH_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -tWH_cSS_AAA,1,0,0,1,2,2,3,0,0,0,,, -tWH_cSS_AAC,7,0,0,1,2,2,4,0,0,0,,, -tWH_cSS_AAG,1,0,0,1,3,3,4,0,0,0,,, -tWH_cSS_AAU,0,0,0,1,2,4,4,0,0,0,,, -tWH_cSS_AGA,0,0,0,1,1,3,3,0,0,0,,, -tWH_cSS_AGC,0,0,0,1,1,2,2,0,0,0,,, -tWH_cSS_AGG,0,0,0,1,1,2,4,0,0,0,,, -tWH_cSS_AGU,0,0,0,1,1,1,1,0,0,0,,, -tWH_cSS_CAA,0,5,0,1,2,2,2,10.1,0,0,,, -tWH_cSS_CAC,4,1,0,1,2,2,5,10.2,12.5,0,,, -tWH_cSS_CAG,0,5,0,1,3,3,3,10,0,0,,, -tWH_cSS_CAU,1,0,0,1,2,4,5,0,0,0,,, -tWH_cSS_CCA,0,0,0,1,1,3,4,0,0,0,,, -tWH_cSS_CCC,0,0,0,1,1,3,3,0,0,0,,, -tWH_cSS_CCG,0,1,0,1,2,3,3,0,0,0,,, -tWH_cSS_CCU,0,0,0,1,1,3,4,0,0,0,,, -tWH_cSS_CGA,0,0,0,1,1,3,3,0,0,0,,, -tWH_cSS_CGC,0,0,0,1,1,2,3,0,0,0,,, -tWH_cSS_CGG,0,0,0,1,1,2,4,0,0,0,,, -tWH_cSS_CGU,0,0,0,1,1,1,1,0,0,0,,, -tWH_cSS_GGA,0,1,0,1,3,5,5,9.62,0,0,,, -tWH_cSS_GGC,0,1,0,1,3,6,6,9.8,11.9,0,,, -tWH_cSS_GGG,0,0,0,1,3,4,6,0,0,0,,, -tWH_cSS_GGU,0,0,0,1,3,3,3,0,0,0,,, -tWH_cSS_GUA,0,3,0,1,2,4,4,20,12.2,0,,, -tWH_cSS_GUC,0,1,0,1,2,3,3,10.2,12.5,0,,, -tWH_cSS_GUG,0,3,0,1,3,4,4,19.8,12.05,0,,, -tWH_cSS_GUU,0,3,0,1,2,2,2,20.62,12.66,0,,, -tWH_cSS_UAA,1,1,0,1,2,2,5,0,0,0,,, -tWH_cSS_UAC,12,1,1,1,2,2,5,10.31,12.66,0,,, -tWH_cSS_UAG,23,0,4,1,3,3,6,0,0,0,,, -tWH_cSS_UAU,1,0,0,1,2,5,6,0,0,0,,, -tWH_cSS_UGA,0,1,0,1,1,4,4,10,0,0,,, -tWH_cSS_UGC,0,0,0,1,1,4,4,0,0,0,,, -tWH_cSS_UGG,0,0,0,1,1,3,5,0,0,0,,, -tWH_cSS_UGU,0,0,0,1,1,2,2,0,0,0,,, -tWH_cSS_UUA,0,3,0,1,1,3,3,20.83,12.82,0,,, -tWH_cSS_UUC,0,1,0,1,1,2,2,10.64,13.16,0,,, -tWH_cSS_UUG,0,3,0,1,2,2,2,20.62,12.66,0,,, -tWH_cSS_UUU,0,3,0,1,1,1,1,21.51,13.33,0,,, -tWH_cSW_AAA,0,0,0,1,3,3,4,0,0,0,,, -tWH_cSW_AAC,0,0,0,1,3,4,4,0,0,0,,, -tWH_cSW_AAG,0,2,0,1,2,2,2,19.42,0,0,,, -tWH_cSW_AAU,0,0,0,1,3,4,4,0,0,0,,, -tWH_cSW_AGA,0,1,0,1,1,1,2,0,0,0,,, -tWH_cSW_AGC,0,1,0,1,2,2,3,0,0,0,,, -tWH_cSW_AGG,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSW_AGU,0,1,0,1,3,3,3,0,0,0,,, -tWH_cSW_CAA,0,0,0,1,3,3,4,0,0,0,,, -tWH_cSW_CAC,0,0,0,1,3,3,4,0,0,0,,, -tWH_cSW_CAG,0,2,0,1,2,2,2,19.8,0,0,,, -tWH_cSW_CAU,0,0,0,1,0,4,4,0,0,0,,, -tWH_cSW_CCA,0,0,0,1,2,3,3,0,0,0,,, -tWH_cSW_CCC,0,0,0,1,2,3,3,0,0,0,,, -tWH_cSW_CCG,0,14,0,1,3,3,3,131.31,111.11,0,,, -tWH_cSW_CCU,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSW_CGA,0,1,0,1,1,1,2,0,0,0,,, -tWH_cSW_CGC,0,1,0,1,2,2,3,0,0,0,,, -tWH_cSW_CGG,0,0,0,1,2,2,2,0,0,0,,, -tWH_cSW_CGU,0,1,0,1,3,3,3,0,0,0,,, -tWH_cSW_GGA,0,4,0,1,3,3,3,0,0,0,,, -tWH_cSW_GGC,0,4,0,1,0,4,4,0,0,0,,, -tWH_cSW_GGG,0,2,0,1,4,4,4,19.05,0,0,,, -tWH_cSW_GGU,0,1,0,1,5,5,5,9.9,12.05,0,,, -tWH_cSW_GUA,0,3,0,1,3,3,3,20,12.2,0,,, -tWH_cSW_GUC,0,0,0,1,3,6,6,0,0,0,,, -tWH_cSW_GUG,0,1,0,1,4,4,5,9.9,0,0,,, -tWH_cSW_GUU,0,0,0,1,3,3,3,0,0,0,,, -tWH_cSW_UAA,2,3,0,1,3,3,5,0,0,0,,, -tWH_cSW_UAC,0,2,0,1,3,3,3,0,0,0,,, -tWH_cSW_UAG,0,2,0,1,2,2,2,20,0,0,,, -tWH_cSW_UAU,0,0,0,1,3,4,4,0,0,0,,, -tWH_cSW_UGA,0,4,0,1,1,2,2,30,0,0,,, -tWH_cSW_UGC,0,4,0,1,2,3,3,30.61,0,0,,, -tWH_cSW_UGG,0,2,0,1,2,3,3,19.8,0,0,,, -tWH_cSW_UGU,0,1,0,1,3,4,4,10.31,12.66,0,,, -tWH_cSW_UUA,0,3,0,1,2,2,2,20.83,12.82,0,,, -tWH_cSW_UUC,0,0,0,1,2,4,4,0,0,0,,, -tWH_cSW_UUG,0,1,0,1,3,3,4,10.31,0,0,,, -tWH_cSW_UUU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_AAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSH_AAC,0,0,0,1,3,3,4,0,0,0,,, -tWH_tSH_AAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_AGA,0,1,0,1,3,3,4,0,0,0,,, -tWH_tSH_AGG,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_AGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_CAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSH_CAC,0,0,0,1,3,3,4,0,0,0,,, -tWH_tSH_CAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_CCA,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_CCC,0,14,0,1,2,2,2,135.42,115.38,0,,, -tWH_tSH_CGA,0,1,0,1,3,3,4,0,0,0,,, -tWH_tSH_CGG,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_CGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_GGA,0,4,0,1,5,5,5,0,0,0,,, -tWH_tSH_GGG,0,0,0,1,4,4,4,0,0,0,,, -tWH_tSH_GGU,0,0,0,1,4,4,4,0,0,0,,, -tWH_tSH_GUA,0,8,0,1,3,3,3,60,60.98,25,,, -tWH_tSH_GUC,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSH_UAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSH_UAC,0,2,0,1,3,3,3,0,0,0,,, -tWH_tSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSH_UGA,0,4,0,1,3,4,4,30,0,0,,, -tWH_tSH_UGG,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSH_UGU,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSH_UUA,0,8,0,1,2,2,2,62.5,64.1,27.78,,, -tWH_tSH_UUC,0,0,0,1,2,0,2,0,0,0,,, -tWH_tSS_AAA,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSS_AAC,1,0,0,1,2,3,3,0,0,0,,, -tWH_tSS_AAG,6,1,0,1,3,0,5,0,0,23.26,,, -tWH_tSS_AAU,1,3,0,1,2,3,4,10.1,0,0,,, -tWH_tSS_AGA,0,3,0,1,1,1,2,9.71,0,0,,, -tWH_tSS_AGC,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSS_AGG,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSS_AGU,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSS_CAA,0,0,1,1,2,3,3,0,0,0,,, -tWH_tSS_CAC,1,0,0,1,2,3,4,0,0,0,,, -tWH_tSS_CAG,8,0,1,1,3,4,4,0,0,24.39,,, -tWH_tSS_CAU,0,1,0,1,2,3,3,0,0,0,,, -tWH_tSS_CGA,0,3,0,1,1,1,2,9.9,0,0,,, -tWH_tSS_CGC,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSS_CGG,0,0,0,1,3,5,5,0,0,0,,, -tWH_tSS_CGU,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSS_GGA,0,6,0,1,3,3,3,9.62,0,0,,, -tWH_tSS_GGC,0,0,0,1,4,4,4,0,0,0,,, -tWH_tSS_GGG,0,0,0,1,5,7,7,0,0,0,,, -tWH_tSS_GGU,0,0,0,1,4,5,5,0,0,0,,, -tWH_tSS_UAA,1,0,1,1,2,3,2,0,0,0,,, -tWH_tSS_UAC,4,0,1,1,2,3,3,0,0,0,,, -tWH_tSS_UAG,5,0,10,1,3,4,5,0,0,25,,, -tWH_tSS_UAU,2,1,2,1,2,3,3,10.42,12.82,0,,, -tWH_tSS_UGA,0,6,0,1,1,2,2,40,0,0,,, -tWH_tSS_UGC,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSS_UGG,0,0,0,1,3,6,6,0,0,0,,, -tWH_tSS_UGU,0,0,0,1,2,4,4,0,0,0,,, -tWH_tSW_AAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_AAC,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_AAU,0,2,0,1,3,3,3,20.2,24.69,0,,, -tWH_tSW_AGA,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSW_AGC,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSW_AGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSW_CAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_CAC,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_CAU,0,2,0,1,3,3,3,0,0,0,,, -tWH_tSW_CCA,0,14,0,1,2,2,2,132.65,112.5,0,,, -tWH_tSW_CCC,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSW_CCG,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSW_CCU,0,0,0,1,2,3,3,0,0,0,,, -tWH_tSW_CGA,1,1,0,1,3,4,3,9.9,12.05,0,,, -tWH_tSW_CGC,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSW_CGU,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSW_GGA,1,0,0,1,5,6,6,0,0,0,,, -tWH_tSW_GGC,0,1,0,1,5,6,6,9.8,11.9,0,,, -tWH_tSW_GGU,0,0,0,1,4,4,4,0,0,0,,, -tWH_tSW_GUA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_GUC,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_GUG,0,0,0,1,4,6,6,0,0,0,,, -tWH_tSW_GUU,0,4,0,1,3,3,3,30.93,37.97,0,,, -tWH_tSW_UAA,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_UAC,0,0,0,1,3,3,3,0,0,0,,, -tWH_tSW_UAU,0,2,0,1,3,3,3,0,0,0,,, -tWH_tSW_UGA,0,0,0,1,3,5,5,0,0,0,,, -tWH_tSW_UGU,0,0,0,1,2,3,3,10.31,12.66,27.03,,, -tWH_tSW_UUA,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSW_UUC,0,0,0,1,2,2,2,0,0,0,,, -tWH_tSW_UUG,0,0,0,1,3,4,4,0,0,0,,, -tWH_tSW_UUU,0,4,0,1,2,2,2,32.26,40,0,,, -tWW_cHH_AAG,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHH_ACG,0,37,0,1,2,2,2,29.7,12.05,0,,, -tWW_cHH_CAG,2,1,2,1,5,5,7,9.9,12.05,0,,, -tWW_cHH_CCG,0,35,0,1,2,2,2,10.1,0,0,,, -tWW_cHH_CGA,0,0,0,1,4,5,5,0,0,0,,, -tWW_cHH_CGC,0,10,0,1,2,3,3,10.1,12.35,0,,, -tWW_cHH_CGG,0,2,0,1,2,3,4,19.61,0,0,,, -tWW_cHH_GCG,0,36,0,1,2,3,3,19.61,0,23.81,,, -tWW_cHH_GGA,0,11,0,1,4,4,4,96.15,93.02,159.09,,, -tWW_cHH_GGC,0,2,0,1,3,3,5,9.8,11.9,0,,, -tWW_cHH_GGG,0,0,0,1,4,4,7,0,0,0,,, -tWW_cHH_UAG,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHH_UCG,0,34,0,1,2,2,2,0,0,0,,, -tWW_cHH_UGA,0,25,0,1,1,2,2,81.63,100,52.63,,, -tWW_cHH_UGC,0,1,0,1,2,2,3,10.2,12.5,0,,, -tWW_cHH_UGG,0,0,0,1,2,2,4,0,0,0,,, -tWW_cHS_AAA,1,0,0,1,3,4,4,0,0,0,,, -tWW_cHS_AAC,0,0,0,1,3,3,3,20.2,0,0,,, -tWW_cHS_AAG,0,12,1,1,3,4,3,9.8,11.76,23.26,,, -tWW_cHS_AAU,0,0,0,1,3,4,4,0,0,0,,, -tWW_cHS_ACA,0,7,0,1,3,3,3,70,0,0,,, -tWW_cHS_ACC,0,9,0,1,3,3,3,62.5,75,52.63,,, -tWW_cHS_ACG,0,5,0,1,2,3,3,0,0,0,,, -tWW_cHS_ACU,0,2,0,1,3,3,3,52.08,0,0,,, -tWW_cHS_AUA,0,1,0,1,2,2,2,0,0,0,,, -tWW_cHS_AUC,0,0,0,1,2,2,2,0,0,0,,, -tWW_cHS_AUG,0,3,0,1,3,3,3,0,0,0,,, -tWW_cHS_AUU,0,0,0,1,2,2,2,0,0,0,,, -tWW_cHS_CAA,0,2,0,1,3,4,6,10.1,0,0,,, -tWW_cHS_CAC,0,0,0,1,3,3,4,20.41,0,0,,, -tWW_cHS_CAG,0,1,0,1,3,4,4,9.9,12.05,24.39,,, -tWW_cHS_CAU,0,0,0,1,3,4,4,0,0,0,,, -tWW_cHS_CCA,0,7,0,1,3,3,3,10.31,0,0,,, -tWW_cHS_CCC,0,24,0,1,3,3,5,73.68,89.74,55.56,,, -tWW_cHS_CCG,0,1,0,1,2,3,3,10.1,0,0,,, -tWW_cHS_CCU,0,11,0,1,3,3,3,10.64,0,0,,, -tWW_cHS_CGA,0,2,0,1,2,5,5,10,0,0,,, -tWW_cHS_CGG,0,1,0,1,3,4,4,0,0,0,,, -tWW_cHS_CUA,0,0,0,1,2,2,2,0,0,0,,, -tWW_cHS_CUC,0,4,0,1,2,2,3,42.55,0,0,,, -tWW_cHS_CUG,0,2,0,1,3,3,3,0,0,0,,, -tWW_cHS_CUU,0,5,0,1,2,2,2,0,0,0,,, -tWW_cHS_GCA,0,0,0,1,3,4,5,0,12.05,24.39,,, -tWW_cHS_GCC,0,7,0,1,3,4,7,70.71,74.07,51.28,,, -tWW_cHS_GCG,0,0,0,1,2,4,4,9.8,11.9,23.81,,, -tWW_cHS_GCU,0,0,0,1,3,4,5,0,0,26.32,,, -tWW_cHS_GGA,0,2,0,1,4,6,6,9.71,0,0,,, -tWW_cHS_GGG,0,7,0,1,4,4,6,28.57,34.48,66.67,,, -tWW_cHS_GUA,0,11,0,1,2,2,2,0,0,0,,, -tWW_cHS_GUC,0,12,0,1,2,2,5,20.41,0,0,,, -tWW_cHS_GUG,0,21,0,1,3,3,4,0,0,0,,, -tWW_cHS_GUU,0,11,0,1,2,2,3,0,0,0,,, -tWW_cHS_UAA,0,6,1,1,3,4,5,60.61,0,0,,, -tWW_cHS_UAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHS_UAG,0,10,2,1,3,4,6,90,12.2,25,,, -tWW_cHS_UAU,0,0,0,1,3,4,4,0,0,0,,, -tWW_cHS_UCA,0,2,0,1,3,3,3,10.42,0,0,,, -tWW_cHS_UCC,0,10,0,1,3,3,4,74.47,77.92,57.14,,, -tWW_cHS_UCG,0,0,0,1,3,4,4,0,0,0,,, -tWW_cHS_UCU,0,1,0,1,3,0,3,0,0,0,,, -tWW_cHS_UGA,0,2,0,1,2,4,5,10,0,0,,, -tWW_cHS_UGG,0,0,0,1,4,4,5,0,0,0,,, -tWW_cHS_UUA,0,21,0,1,2,2,2,52.08,64.1,0,,, -tWW_cHS_UUC,0,8,0,1,2,0,2,21.51,0,0,,, -tWW_cHS_UUG,0,4,0,1,4,4,4,0,0,0,,, -tWW_cHS_UUU,0,1,0,1,2,2,2,0,0,0,,, -tWW_cHW_AAG,0,0,0,1,4,4,5,0,0,0,,, -tWW_cHW_AAU,0,0,0,1,4,4,4,0,0,0,,, -tWW_cHW_ACC,0,0,0,1,4,4,4,0,0,0,,, -tWW_cHW_AUA,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHW_AUC,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHW_AUU,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHW_CAG,0,0,0,1,4,4,4,0,0,0,,, -tWW_cHW_CAU,0,0,0,1,4,4,4,0,0,0,,, -tWW_cHW_CCC,0,1,0,1,3,3,3,10.42,0,0,,, -tWW_cHW_CGA,0,1,0,1,3,4,4,9.9,12.05,24.39,,, -tWW_cHW_CGC,0,0,0,1,3,4,5,0,0,0,,, -tWW_cHW_CGG,0,0,0,1,4,5,5,0,0,0,,, -tWW_cHW_CGU,0,10,0,1,3,4,4,112.24,0,0,,, -tWW_cHW_CUA,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHW_CUC,0,0,0,1,3,3,3,0,0,0,,, -tWW_cHW_CUU,0,0,0,1,3,0,3,0,0,0,,, -tWW_cHW_GCC,0,0,0,1,3,4,4,10.1,12.35,25.64,,, -tWW_cHW_GGA,0,1,0,1,4,4,6,9.62,11.63,22.73,,, -tWW_cHW_GGC,0,2,0,1,4,4,6,9.8,11.9,23.81,,, -tWW_cHW_GGG,0,2,0,1,5,5,5,0,0,0,,, -tWW_cHW_GGU,0,0,0,1,4,4,6,0,0,0,,, -tWW_cHW_GUA,0,0,0,1,3,3,4,0,0,0,,, -tWW_cHW_GUC,0,0,0,1,3,3,4,0,0,0,,, -tWW_cHW_GUU,0,3,0,1,3,3,4,0,0,0,,, -tWW_cHW_UAG,0,0,0,1,4,4,5,0,0,0,,, -tWW_cHW_UAU,0,1,0,1,4,4,4,10.42,0,0,,, -tWW_cHW_UCC,0,0,0,1,4,5,5,0,0,0,,, -tWW_cHW_UGA,0,1,0,1,3,3,4,10,12.2,25,,, -tWW_cHW_UGC,0,0,0,1,4,4,5,0,0,0,,, -tWW_cHW_UGG,0,3,0,1,4,4,5,29.7,36.14,73.17,,, -tWW_cHW_UGU,0,0,0,1,3,3,4,0,0,0,,, -tWW_cHW_UUA,0,1,0,1,3,3,3,0,0,0,,, -tWW_cHW_UUC,0,1,0,1,4,4,4,0,0,0,,, -tWW_cHW_UUU,0,4,0,1,3,0,3,0,0,0,,, -tWW_cSH_AAA,0,2,0,1,3,4,5,19.61,0,0,,, -tWW_cSH_AAC,0,1,0,1,3,3,3,0,0,0,,, -tWW_cSH_AAG,0,7,0,1,2,2,2,0,0,0,,, -tWW_cSH_AAU,0,0,0,1,2,2,2,0,0,0,,, -tWW_cSH_ACA,0,1,0,1,3,3,3,10,0,0,,, -tWW_cSH_ACC,0,3,0,1,3,3,4,30.61,37.5,52.63,,, -tWW_cSH_ACU,0,15,0,1,2,3,3,144.33,113.92,0,,, -tWW_cSH_AUA,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSH_AUC,0,12,0,1,3,3,3,72.16,75.95,135.14,,, -tWW_cSH_AUU,0,3,0,1,3,3,3,20.83,12.82,0,,, -tWW_cSH_CAA,0,4,0,1,3,4,5,30,12.2,0,,, -tWW_cSH_CAG,0,7,0,1,2,2,2,0,0,0,,, -tWW_cSH_CAU,0,0,0,1,2,0,2,0,0,0,,, -tWW_cSH_CCA,0,1,0,1,3,3,3,10.2,0,0,,, -tWW_cSH_CCC,0,8,0,1,1,1,1,31.91,39.47,58.82,,, -tWW_cSH_CCU,0,15,0,1,3,0,4,147.37,116.88,0,,, -tWW_cSH_CGA,0,17,0,1,3,4,4,99.01,120.48,243.9,,, -tWW_cSH_CGC,0,1,0,1,2,3,3,0,0,0,,, -tWW_cSH_CGG,0,0,0,1,4,5,7,0,0,0,,, -tWW_cSH_CGU,0,0,1,1,3,4,4,0,0,0,,, -tWW_cSH_CUA,0,3,0,1,3,3,3,20.62,12.66,0,,, -tWW_cSH_CUC,0,15,0,1,3,3,3,84.21,90.91,171.43,,, -tWW_cSH_CUU,0,5,0,1,3,3,3,31.91,26.32,29.41,,, -tWW_cSH_GCA,0,6,0,1,3,3,3,59.41,60.24,121.95,,, -tWW_cSH_GCC,0,26,0,1,3,2,2,41.67,51.28,83.33,,, -tWW_cSH_GCU,0,18,0,1,2,0,3,142.86,125,26.32,,, -tWW_cSH_GGA,0,1,0,1,4,4,5,9.62,11.63,22.73,,, -tWW_cSH_GGC,0,1,0,1,3,3,4,0,0,0,,, -tWW_cSH_GGG,0,24,0,1,4,4,7,57.14,34.48,0,,, -tWW_cSH_GGU,0,0,0,1,4,4,5,0,0,0,,, -tWW_cSH_GUA,0,0,0,1,3,4,5,0,0,0,,, -tWW_cSH_GUC,0,3,0,1,3,3,4,20.41,12.5,0,,, -tWW_cSH_GUU,0,3,0,1,2,2,3,20.62,12.66,0,,, -tWW_cSH_UAA,0,4,0,1,3,4,5,30.3,12.35,0,,, -tWW_cSH_UAC,0,1,0,1,3,3,3,0,0,0,,, -tWW_cSH_UAG,0,7,0,1,2,2,2,0,0,0,,, -tWW_cSH_UAU,0,0,0,1,2,2,2,0,0,0,,, -tWW_cSH_UCA,0,1,0,1,4,4,4,10.31,0,0,,, -tWW_cSH_UCC,0,6,0,1,2,2,2,32.26,40,60.61,,, -tWW_cSH_UCU,0,15,0,1,2,3,3,148.94,118.42,0,,, -tWW_cSH_UGA,0,1,0,1,3,3,3,10,12.2,25,,, -tWW_cSH_UGC,0,1,0,1,2,2,2,0,0,0,,, -tWW_cSH_UGG,0,23,0,1,3,3,5,49.5,36.14,0,,, -tWW_cSH_UGU,0,0,0,1,3,3,3,0,0,0,,, -tWW_cSH_UUA,0,5,0,1,3,3,3,20.83,12.82,0,,, -tWW_cSH_UUC,0,5,0,1,3,3,3,21.28,13.16,0,,, -tWW_cSH_UUU,0,5,0,1,2,2,2,21.51,13.33,0,,, -tWW_cSS_AAA,1,0,0,1,2,2,5,0,0,0,,, -tWW_cSS_AAC,9,1,7,1,2,2,3,0,0,0,,, -tWW_cSS_AAG,7,0,0,1,3,3,5,0,0,0,,, -tWW_cSS_AAU,7,0,2,1,2,4,5,0,0,0,,, -tWW_cSS_ACA,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_ACC,0,0,0,1,2,2,2,0,0,0,,, -tWW_cSS_ACG,0,1,0,1,3,4,4,0,0,0,,, -tWW_cSS_ACU,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_AUA,5,1,0,1,2,4,4,0,0,0,,, -tWW_cSS_AUC,0,1,0,1,2,3,3,10.31,12.66,0,,, -tWW_cSS_AUG,0,3,0,1,3,4,4,20,12.2,0,,, -tWW_cSS_AUU,0,3,0,1,2,2,2,20.83,12.82,0,,, -tWW_cSS_CAA,0,5,0,1,2,2,2,10.1,0,0,,, -tWW_cSS_CAC,0,6,0,1,2,2,2,0,0,0,,, -tWW_cSS_CAG,0,5,0,1,3,3,3,10,0,0,,, -tWW_cSS_CAU,0,1,0,1,2,5,5,0,0,0,,, -tWW_cSS_CCA,0,0,1,1,2,4,4,0,0,0,,, -tWW_cSS_CCC,0,1,0,1,2,4,4,10.42,0,0,,, -tWW_cSS_CCG,0,2,0,1,3,4,4,10.1,12.35,25.64,,, -tWW_cSS_CCU,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_CGA,1,1,0,1,2,0,5,0,0,0,,, -tWW_cSS_CGC,1,3,0,1,2,4,4,0,0,0,,, -tWW_cSS_CGG,0,0,0,1,2,4,6,0,0,0,,, -tWW_cSS_CGU,0,0,0,1,2,3,3,0,0,0,,, -tWW_cSS_CUA,0,3,0,1,2,4,4,20.62,12.66,0,,, -tWW_cSS_CUC,0,1,0,1,2,0,4,21.05,25.97,0,,, -tWW_cSS_CUG,0,8,0,1,3,4,4,51.02,50,78.95,,, -tWW_cSS_CUU,0,3,0,1,2,2,2,21.28,13.16,0,,, -tWW_cSS_GCA,0,3,0,1,2,4,4,29.7,36.14,73.17,,, -tWW_cSS_GCC,0,0,0,1,2,2,2,0,0,25.64,,, -tWW_cSS_GCG,1,1,0,1,3,4,7,0,0,71.43,,, -tWW_cSS_GCU,0,0,0,1,2,4,4,0,12.5,26.32,,, -tWW_cSS_GGA,0,0,0,1,3,5,6,0,0,0,,, -tWW_cSS_GGC,0,7,0,1,3,5,7,58.82,35.71,0,,, -tWW_cSS_GGG,0,0,0,1,3,4,7,0,0,0,,, -tWW_cSS_GGU,0,0,0,1,3,3,4,0,0,0,,, -tWW_cSS_GUA,0,3,0,1,2,4,5,20,12.2,0,,, -tWW_cSS_GUC,0,0,0,1,2,3,4,0,0,0,,, -tWW_cSS_GUG,0,3,0,1,3,4,5,19.8,12.05,0,,, -tWW_cSS_GUU,0,3,0,1,2,2,3,20.62,12.66,0,,, -tWW_cSS_UAA,0,5,1,1,2,2,2,10.2,0,0,,, -tWW_cSS_UAC,0,6,0,1,2,2,2,0,0,0,,, -tWW_cSS_UAG,0,5,0,1,3,3,3,10.1,0,0,,, -tWW_cSS_UAU,1,0,0,1,2,4,3,0,0,0,,, -tWW_cSS_UCA,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_UCC,0,0,0,1,2,2,2,0,0,0,,, -tWW_cSS_UCG,0,1,0,1,4,5,5,0,0,0,,, -tWW_cSS_UCU,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_UGA,0,0,0,1,2,4,4,0,0,0,,, -tWW_cSS_UGC,0,6,0,1,2,4,5,40.82,50,0,,, -tWW_cSS_UGG,0,0,0,1,2,3,5,0,0,0,,, -tWW_cSS_UGU,0,0,0,1,2,2,2,0,0,0,,, -tWW_cSS_UUA,0,5,0,1,2,4,4,20.83,12.82,0,,, -tWW_cSS_UUC,0,1,0,1,2,4,4,0,0,0,,, -tWW_cSS_UUG,0,1,0,1,3,5,5,0,0,0,,, -tWW_cSS_UUU,0,5,0,1,2,2,2,21.51,13.33,0,,, -tWW_cSW_AAA,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_AAC,1,2,1,1,3,4,5,20,24.39,0,,, -tWW_cSW_AAG,0,2,0,1,2,2,2,19.42,0,0,,, -tWW_cSW_AAU,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_ACA,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_ACC,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_ACG,0,0,1,1,4,4,4,0,0,0,,, -tWW_cSW_ACU,0,0,0,1,3,3,3,0,0,0,,, -tWW_cSW_AUA,1,0,0,1,3,3,4,0,0,0,,, -tWW_cSW_AUC,0,0,0,1,3,6,6,0,0,0,,, -tWW_cSW_AUG,0,12,0,1,2,2,3,30.93,25.32,54.05,,, -tWW_cSW_AUU,0,8,0,1,3,3,3,72.92,89.74,194.44,,, -tWW_cSW_CAA,0,0,0,1,3,3,3,0,0,0,,, -tWW_cSW_CAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_cSW_CAG,0,2,0,1,2,2,2,19.8,0,0,,, -tWW_cSW_CAU,0,1,0,1,3,4,4,10.31,12.66,0,,, -tWW_cSW_CCA,0,14,0,1,3,3,3,132.65,112.5,0,,, -tWW_cSW_CCC,0,1,0,1,3,4,4,10.42,0,0,,, -tWW_cSW_CCG,0,20,0,1,4,4,4,181.82,172.84,128.21,,, -tWW_cSW_CCU,0,6,0,1,3,4,4,63.16,64.94,142.86,,, -tWW_cSW_CGA,0,1,0,1,2,3,3,0,0,0,,, -tWW_cSW_CGC,0,1,0,1,3,4,4,0,0,0,,, -tWW_cSW_CGG,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_CGU,0,1,0,1,4,5,5,0,0,0,,, -tWW_cSW_CUA,0,7,0,1,3,3,3,30.93,25.32,27.03,,, -tWW_cSW_CUC,0,3,0,1,3,3,3,21.05,12.99,0,,, -tWW_cSW_CUG,0,18,0,1,2,2,3,31.58,12.99,0,,, -tWW_cSW_CUU,0,8,0,1,1,2,2,74.47,92.11,205.88,,, -tWW_cSW_GCA,0,19,0,1,3,3,3,130,109.76,0,,, -tWW_cSW_GCC,0,4,0,1,3,5,5,0,0,0,,, -tWW_cSW_GCG,0,24,0,1,2,3,3,49.02,59.52,119.05,,, -tWW_cSW_GCU,0,21,0,1,1,2,2,40.82,50,105.26,,, -tWW_cSW_GGA,0,1,0,1,3,3,4,0,0,0,,, -tWW_cSW_GGC,0,1,0,1,4,4,5,0,0,0,,, -tWW_cSW_GGG,0,0,0,1,4,4,5,0,0,0,,, -tWW_cSW_GGU,0,26,0,1,5,5,6,49.5,36.14,0,,, -tWW_cSW_GUA,0,0,0,1,3,4,5,0,0,0,,, -tWW_cSW_GUC,0,3,0,1,3,3,4,20.41,12.5,0,,, -tWW_cSW_GUG,0,1,0,1,4,4,6,9.9,0,0,,, -tWW_cSW_GUU,0,0,0,1,3,3,4,0,0,0,,, -tWW_cSW_UAA,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_UAC,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_UAG,0,2,0,1,2,2,2,20,0,0,,, -tWW_cSW_UAU,0,0,0,1,3,4,4,0,0,0,,, -tWW_cSW_UCA,0,14,0,1,3,3,3,134.02,113.92,0,,, -tWW_cSW_UCC,0,14,0,1,4,4,4,136.84,116.88,0,,, -tWW_cSW_UCG,0,19,0,1,4,4,4,173.47,162.5,105.26,,, -tWW_cSW_UCU,0,4,0,1,3,4,4,42.55,52.63,117.65,,, -tWW_cSW_UGA,0,1,0,1,2,2,2,0,0,0,,, -tWW_cSW_UGC,0,1,0,1,3,3,3,0,0,0,,, -tWW_cSW_UGG,0,0,0,1,3,3,3,0,0,0,,, -tWW_cSW_UGU,0,18,0,1,4,4,5,20.62,12.66,0,,, -tWW_cSW_UUA,0,5,0,1,3,3,3,20.83,12.82,0,,, -tWW_cSW_UUC,0,5,0,1,3,0,3,21.28,13.16,0,,, -tWW_cSW_UUG,0,7,0,1,4,4,5,30.93,12.66,0,,, -tWW_cSW_UUU,0,1,0,1,3,4,4,0,0,0,,, -tWW_tHH_AAA,1,0,2,1,4,5,5,0,0,0,,, -tWW_tHH_AAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_AAG,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_AAU,0,0,0,1,3,4,5,0,0,0,,, -tWW_tHH_ACA,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_ACG,0,0,0,1,3,4,5,0,0,0,,, -tWW_tHH_ACU,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_AUA,0,0,1,1,3,4,4,0,0,0,,, -tWW_tHH_AUC,0,0,0,1,3,3,4,0,0,0,,, -tWW_tHH_CAA,0,0,0,1,4,5,5,0,0,0,,, -tWW_tHH_CAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_CAG,0,8,0,1,3,3,3,59.41,24.1,48.78,,, -tWW_tHH_CAU,0,2,0,1,3,3,3,10.31,12.66,27.03,,, -tWW_tHH_CCA,0,1,0,1,3,4,4,10.2,0,0,,, -tWW_tHH_CCG,0,0,0,1,3,4,5,0,0,0,,, -tWW_tHH_CCU,0,1,0,1,3,0,4,10.53,0,0,,, -tWW_tHH_CGA,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_CGC,0,0,0,1,3,5,5,0,0,0,,, -tWW_tHH_CGG,0,0,0,1,2,2,3,0,0,0,,, -tWW_tHH_CUA,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_CUC,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_GCA,2,0,2,1,3,5,5,0,0,24.39,,, -tWW_tHH_GCG,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_GCU,0,0,0,1,3,5,5,10.2,12.5,26.32,,, -tWW_tHH_GGA,0,13,0,1,4,4,4,0,0,0,,, -tWW_tHH_GGC,0,0,1,1,4,4,5,0,0,0,,, -tWW_tHH_GGG,0,12,0,1,3,4,5,19.23,23.26,66.67,,, -tWW_tHH_GUA,0,8,0,1,3,4,4,0,0,0,,, -tWW_tHH_GUC,0,8,0,1,3,4,4,61.22,75,131.58,,, -tWW_tHH_UAA,0,0,3,1,4,5,5,0,0,0,,, -tWW_tHH_UAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_UAG,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHH_UAU,0,0,0,1,3,0,5,0,0,0,,, -tWW_tHH_UCA,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_UCG,0,0,0,1,3,4,5,0,0,0,,, -tWW_tHH_UCU,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHH_UGA,0,91,0,1,3,6,7,20.41,25,0,,, -tWW_tHH_UGC,0,0,0,1,3,3,4,0,0,0,,, -tWW_tHH_UGG,0,30,0,1,2,2,2,20.2,24.69,0,,, -tWW_tHH_UUA,0,34,0,1,3,4,4,117.02,118.42,0,,, -tWW_tHH_UUC,0,3,0,1,3,4,4,31.91,39.47,88.24,,, -tWW_tHS_AAA,0,47,0,1,3,3,2,303.92,190.48,0,,, -tWW_tHS_AAC,0,14,3,1,3,5,5,130,158.54,0,,, -tWW_tHS_AAG,19,0,3,1,4,3,5,0,0,0,,, -tWW_tHS_AAU,1,0,2,1,3,3,5,0,0,25.64,,, -tWW_tHS_ACA,0,13,0,1,3,3,3,70.71,86.42,0,,, -tWW_tHS_ACC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHS_ACU,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHS_AUA,0,6,1,1,2,2,2,0,0,0,,, -tWW_tHS_AUG,0,0,1,1,3,3,3,0,0,0,,, -tWW_tHS_CAA,0,27,0,1,4,3,3,242.42,296.3,0,,, -tWW_tHS_CAC,0,22,0,1,4,0,8,122.45,125,0,,, -tWW_tHS_CAG,0,21,1,1,5,7,8,198.02,192.77,0,,, -tWW_tHS_CAU,0,46,0,1,4,7,7,197.92,265.82,27.03,,, -tWW_tHS_CCA,0,0,0,1,3,5,5,0,0,0,,, -tWW_tHS_CCC,0,13,0,1,3,0,4,135.42,115.38,0,,, -tWW_tHS_CCU,0,4,0,1,3,3,3,21.05,12.99,0,,, -tWW_tHS_CGG,1,0,0,1,3,3,5,0,0,0,,, -tWW_tHS_CUA,0,7,0,1,2,2,2,10.42,12.82,0,,, -tWW_tHS_CUG,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHS_GCA,0,0,0,1,3,5,5,0,12.05,24.39,,, -tWW_tHS_GCC,0,0,0,1,3,5,5,0,0,25.64,,, -tWW_tHS_GCU,0,0,0,1,3,5,5,0,12.5,26.32,,, -tWW_tHS_GGG,0,24,0,1,4,5,5,200,241.38,44.44,,, -tWW_tHS_GUA,1,0,1,1,2,3,4,0,0,175,,, -tWW_tHS_GUG,0,4,0,1,3,3,3,39.6,48.19,48.78,,, -tWW_tHS_UAA,0,7,0,1,3,6,6,20.41,12.5,0,,, -tWW_tHS_UAC,0,14,1,1,3,6,6,154.64,126.58,0,,, -tWW_tHS_UAG,3,0,1,1,4,8,7,0,0,0,,, -tWW_tHS_UAU,1,0,1,1,3,6,8,0,0,27.78,,, -tWW_tHS_UCA,0,6,0,1,3,6,6,20.83,12.82,0,,, -tWW_tHS_UCC,0,14,0,1,3,4,4,136.84,116.88,0,,, -tWW_tHS_UCU,0,4,0,1,3,3,3,21.28,13.16,0,,, -tWW_tHS_UGG,0,18,0,1,3,3,3,168.32,204.82,73.17,,, -tWW_tHS_UUA,0,6,0,1,2,3,4,41.67,51.28,83.33,,, -tWW_tHS_UUG,0,7,0,1,4,4,4,61.86,75.95,54.05,,, -tWW_tHW_AAA,0,0,4,1,4,4,4,0,0,0,,, -tWW_tHW_AAC,2,1,0,1,4,4,3,0,0,0,,, -tWW_tHW_AAU,20,0,10,1,4,4,4,0,0,0,,, -tWW_tHW_ACC,0,0,0,1,3,3,4,0,0,0,,, -tWW_tHW_AUG,0,0,0,1,4,4,4,0,0,0,,, -tWW_tHW_AUU,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHW_CAU,0,0,0,1,4,5,5,0,0,0,,, -tWW_tHW_CCC,0,2,0,1,3,3,3,20.83,0,0,,, -tWW_tHW_CGA,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHW_CGC,0,0,0,1,3,4,4,0,0,0,,, -tWW_tHW_CGG,0,0,0,1,5,6,7,0,0,0,,, -tWW_tHW_CGU,0,4,0,1,3,5,5,0,0,0,,, -tWW_tHW_CUU,0,0,0,1,3,3,3,0,0,0,,, -tWW_tHW_GCC,0,0,0,1,3,4,4,10.1,12.35,25.64,,, -tWW_tHW_GGA,0,3,0,1,5,5,7,28.85,34.88,68.18,,, -tWW_tHW_GGC,0,16,0,1,4,0,4,130,109.76,0,,, -tWW_tHW_GGG,0,0,0,1,6,6,8,0,0,0,,, -tWW_tHW_GGU,0,0,0,1,4,5,7,0,0,0,,, -tWW_tHW_GUG,0,10,0,1,4,0,5,69.31,84.34,170.73,,, -tWW_tHW_GUU,0,1,0,1,5,0,7,10.31,12.66,27.03,,, -tWW_tHW_UAA,0,0,2,1,4,4,4,0,0,0,,, -tWW_tHW_UAC,0,0,0,1,4,4,4,0,0,0,,, -tWW_tHW_UAU,4,0,0,1,4,4,5,0,0,0,,, -tWW_tHW_UCC,0,0,0,1,3,3,4,0,0,0,,, -tWW_tHW_UGA,0,3,0,1,3,3,4,20,24.39,50,,, -tWW_tHW_UGC,0,15,0,1,3,4,4,163.27,150,78.95,,, -tWW_tHW_UGG,0,0,0,1,5,5,6,0,0,0,,, -tWW_tHW_UGU,0,0,0,1,3,4,5,0,0,0,,, -tWW_tHW_UUG,0,3,0,1,3,3,3,20.62,25.32,54.05,,, -tWW_tHW_UUU,0,2,0,1,3,3,3,10.75,13.33,30.3,,, -tWW_tSH_AAA,1,0,0,1,3,3,4,0,0,0,,, -tWW_tSH_AAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_AAU,0,0,0,1,2,2,2,0,0,0,,, -tWW_tSH_ACA,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_ACC,0,14,0,1,3,3,3,132.65,112.5,0,,, -tWW_tSH_AUA,0,8,0,1,4,4,4,60.61,61.73,51.28,,, -tWW_tSH_AUC,0,4,0,1,3,0,4,30.93,37.97,81.08,,, -tWW_tSH_CAA,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_CAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_CAU,0,0,0,1,2,2,2,0,0,0,,, -tWW_tSH_CCA,0,1,0,1,4,4,4,10.2,12.5,26.32,,, -tWW_tSH_CCC,0,17,0,1,3,0,3,156.25,141.03,55.56,,, -tWW_tSH_CGA,0,3,0,1,4,5,5,0,0,0,,, -tWW_tSH_CGG,0,3,0,1,3,4,4,0,0,0,,, -tWW_tSH_CGU,0,4,0,1,3,4,4,30.61,37.5,78.95,,, -tWW_tSH_CUA,0,5,0,1,4,4,4,41.24,50.63,54.05,,, -tWW_tSH_CUC,0,2,0,1,3,0,3,31.58,38.96,85.71,,, -tWW_tSH_GCA,0,23,0,1,3,5,4,0,0,0,,, -tWW_tSH_GCC,0,28,0,1,3,3,3,161.62,148.15,51.28,,, -tWW_tSH_GGA,0,1,0,1,5,5,6,0,0,0,,, -tWW_tSH_GGG,0,7,0,1,4,4,7,9.52,0,0,,, -tWW_tSH_GGU,0,5,0,1,4,4,6,9.9,0,0,,, -tWW_tSH_GUA,0,8,0,1,3,3,4,60,60.98,25,,, -tWW_tSH_GUC,0,0,0,1,3,3,4,0,0,0,,, -tWW_tSH_UAA,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_UAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSH_UAU,0,3,0,1,2,2,2,31.25,38.46,83.33,,, -tWW_tSH_UCA,0,2,0,1,3,3,3,20.62,25.32,54.05,,, -tWW_tSH_UCC,0,14,0,1,3,3,3,136.84,116.88,0,,, -tWW_tSH_UGA,0,1,0,1,4,4,4,0,0,0,,, -tWW_tSH_UGG,0,4,0,1,3,3,5,0,0,0,,, -tWW_tSH_UGU,0,2,0,1,3,3,4,0,0,0,,, -tWW_tSH_UUA,0,10,0,1,3,3,3,62.5,64.1,27.78,,, -tWW_tSH_UUC,0,5,0,1,3,3,3,21.28,13.16,0,,, -tWW_tSW_AAA,0,0,0,1,3,3,3,128.71,0,0,,, -tWW_tSW_AAC,0,0,0,1,3,3,3,131.31,0,0,,, -tWW_tSW_AAU,0,1,0,1,3,3,3,0,12.35,0,,, -tWW_tSW_ACA,0,0,0,1,3,3,3,114.58,0,0,,, -tWW_tSW_ACC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSW_ACG,0,0,0,1,4,6,6,0,0,0,,, -tWW_tSW_ACU,0,0,0,1,3,4,4,19.8,0,0,,, -tWW_tSW_AUA,0,0,0,1,4,0,4,0,0,0,,, -tWW_tSW_AUC,0,0,0,1,4,4,4,0,0,0,,, -tWW_tSW_AUG,0,5,0,1,4,6,6,0,0,0,,, -tWW_tSW_AUU,0,7,0,1,3,3,4,30.93,26.32,0,,, -tWW_tSW_CAA,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSW_CAC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSW_CAU,0,3,0,1,3,4,4,10.42,0,0,,, -tWW_tSW_CCA,0,14,0,1,3,3,3,134.02,112.5,0,,, -tWW_tSW_CCC,0,4,0,1,4,0,4,0,12.82,27.78,,, -tWW_tSW_CCG,0,8,0,1,4,5,5,20.41,49.38,102.56,,, -tWW_tSW_CCU,0,6,0,1,3,5,5,0,0,0,,, -tWW_tSW_CGA,0,0,0,1,4,6,6,10.2,0,0,,, -tWW_tSW_CGC,4,0,0,1,5,7,7,0,0,0,,, -tWW_tSW_CGU,0,1,0,1,3,4,4,0,0,0,,, -tWW_tSW_CUA,0,0,0,1,4,4,4,20.62,0,0,,, -tWW_tSW_CUC,0,1,0,1,4,0,4,32.26,12.99,28.57,,, -tWW_tSW_CUG,0,12,0,1,3,3,3,0,12.82,0,,, -tWW_tSW_CUU,0,10,0,1,3,3,5,9.71,40,0,,, -tWW_tSW_GCA,0,20,0,1,3,3,3,0,108.43,24.39,,, -tWW_tSW_GCC,0,13,0,1,2,2,3,0,160.49,333.33,,, -tWW_tSW_GCG,0,9,0,1,2,0,5,20.2,0,0,,, -tWW_tSW_GCU,0,74,0,1,4,7,8,0,64.1,0,,, -tWW_tSW_GGA,0,15,0,1,5,6,5,132.65,23.26,0,,, -tWW_tSW_GGC,0,19,0,1,5,5,5,131.31,35.71,0,,, -tWW_tSW_GGU,0,9,0,1,4,4,6,20,0,0,,, -tWW_tSW_GUA,0,0,0,1,3,3,4,39.22,0,0,,, -tWW_tSW_GUC,0,0,0,1,3,3,4,41.24,0,0,,, -tWW_tSW_GUG,0,0,0,1,4,0,6,0,0,0,,, -tWW_tSW_GUU,0,4,0,1,3,3,4,39.6,37.97,0,,, -tWW_tSW_UAA,0,0,0,1,3,3,3,89.11,0,0,,, -tWW_tSW_UAC,0,0,0,1,3,3,3,9.62,0,0,,, -tWW_tSW_UAU,0,1,0,1,3,0,3,0,12.82,0,,, -tWW_tSW_UCA,0,14,0,1,3,3,3,20,113.92,0,,, -tWW_tSW_UCC,0,0,0,1,3,3,3,0,0,0,,, -tWW_tSW_UCG,0,2,0,1,5,6,6,0,25,26.32,,, -tWW_tSW_UCU,0,3,0,1,3,3,3,10,0,0,,, -tWW_tSW_UGA,0,14,0,1,4,4,3,134.02,48.78,0,,, -tWW_tSW_UGU,0,9,0,1,3,3,4,0,0,0,,, -tWW_tSW_UUA,0,1,0,1,3,3,3,10,0,0,,, -tWW_tSW_UUC,0,1,0,1,3,3,3,0,0,0,,, -tWW_tSW_UUG,0,5,0,1,4,4,4,41.67,12.66,0,,, -tWW_tSW_UUU,0,6,0,1,3,3,3,0,40,0,,, -tWW_tSS_AAA,0,0,0,1,2,3,3,0,0,0,,, -tWW_tSS_AAG,0,1,0,1,2,3,3,0,11.76,0,,, -tWW_tSS_ACA,0,0,0,1,2,3,3,0,0,0,,, -tWW_tSS_ACG,0,0,0,1,3,3,3,10.1,0,0,,, -tWW_tSS_AUA,0,3,0,1,2,4,5,0,0,0,,, -tWW_tSS_AUG,0,1,0,1,3,4,5,0,0,0,,, -tWW_tSS_CCA,0,14,0,1,3,3,3,0,112.5,0,,, -tWW_tSS_CCG,0,16,0,1,4,4,4,0,111.11,0,,, -tWW_tSS_CGA,0,7,0,1,3,5,5,0,12.2,24.39,,, -tWW_tSS_CGG,0,7,0,1,4,0,7,0,47.62,0,,, -tWW_tSS_CUA,0,6,0,1,3,3,4,0,12.66,0,,, -tWW_tSS_CUG,0,0,0,1,3,3,3,31.91,0,0,,, -tWW_tSS_GCA,0,8,0,1,2,3,4,0,36.14,0,,, -tWW_tSS_GCG,0,82,0,1,3,3,4,0,48.19,142.86,,, -tWW_tSS_GGA,3,0,0,1,4,4,4,0,0,22.73,,, -tWW_tSS_GGG,0,1,0,1,5,5,6,20.83,0,0,,, -tWW_tSS_GUA,0,3,0,1,2,3,5,50.51,0,0,,, -tWW_tSS_GUG,0,1,0,1,3,3,4,0,0,0,,, -tWW_tSS_UAA,0,0,0,1,2,3,3,0,0,0,,, -tWW_tSS_UAG,0,1,0,1,2,2,2,0,0,0,,, -tWW_tSS_UCA,0,14,0,1,2,2,2,0,113.92,0,,, -tWW_tSS_UCG,0,1,0,1,3,3,3,0,0,0,,, -tWW_tSS_UGA,0,2,0,1,3,3,3,0,12.2,25,,, -tWW_tSS_UGG,0,1,0,1,4,4,4,10.53,0,0,,, -tWW_tSS_UUA,0,8,0,1,2,0,3,20.83,12.82,0,,, -tWW_tSS_UUG,0,3,0,1,3,0,3,43.01,0,0,,, -cHH_cSH_AAA,0,0,0,0,,,,,,,,, -cHH_cSH_AAC,0,0,0,0,,,,,,,,, -cHH_cSH_AAG,0,0,0,0,,,,,,,,, -cHH_cSH_AAU,0,0,0,0,,,,,,,,, -cHH_cSH_ACA,0,0,0,0,,,,,,,,, -cHH_cSH_ACC,0,0,0,0,,,,,,,,, -cHH_cSH_ACG,0,0,0,0,,,,,,,,, -cHH_cSH_ACU,0,0,0,0,,,,,,,,, -cHH_cSH_AUA,0,0,0,0,,,,,,,,, -cHH_cSH_AUC,0,0,0,0,,,,,,,,, -cHH_cSH_AUG,0,0,0,0,,,,,,,,, -cHH_cSH_AUU,0,0,0,0,,,,,,,,, -cHH_cSH_CAA,0,0,0,0,,,,,,,,, -cHH_cSH_CAC,0,0,0,0,,,,,,,,, -cHH_cSH_CAG,0,0,0,0,,,,,,,,, -cHH_cSH_CAU,0,0,0,0,,,,,,,,, -cHH_cSH_CCA,0,0,0,0,,,,,,,,, -cHH_cSH_CCC,0,0,0,0,,,,,,,,, -cHH_cSH_CCG,0,0,0,0,,,,,,,,, -cHH_cSH_CCU,0,0,0,0,,,,,,,,, -cHH_cSH_CUA,0,0,0,0,,,,,,,,, -cHH_cSH_CUC,0,0,0,0,,,,,,,,, -cHH_cSH_CUG,0,0,0,0,,,,,,,,, -cHH_cSH_CUU,0,0,0,0,,,,,,,,, -cHH_cSH_GCG,0,0,0,0,,,,,,,,, -cHH_cSH_GUA,0,0,0,0,,,,,,,,, -cHH_cSH_GUC,0,0,0,0,,,,,,,,, -cHH_cSH_GUG,0,0,0,0,,,,,,,,, -cHH_cSH_GUU,0,0,0,0,,,,,,,,, -cHH_cSH_UAA,0,0,0,0,,,,,,,,, -cHH_cSH_UAC,0,0,0,0,,,,,,,,, -cHH_cSH_UAG,0,0,0,0,,,,,,,,, -cHH_cSH_UAU,0,0,0,0,,,,,,,,, -cHH_cSH_UCA,0,0,0,0,,,,,,,,, -cHH_cSH_UCC,0,0,0,0,,,,,,,,, -cHH_cSH_UCG,0,0,0,0,,,,,,,,, -cHH_cSH_UCU,0,0,0,0,,,,,,,,, -cHH_cSH_UGA,0,0,0,0,,,,,,,,, -cHH_cSH_UGC,0,0,0,0,,,,,,,,, -cHH_cSH_UGG,0,0,0,0,,,,,,,,, -cHH_cSH_UGU,0,0,0,0,,,,,,,,, -cHH_cSH_UUA,0,0,0,0,,,,,,,,, -cHH_cSH_UUC,0,0,0,0,,,,,,,,, -cHH_cSH_UUG,0,0,0,0,,,,,,,,, -cHH_cSH_UUU,0,0,0,0,,,,,,,,, -cHH_cSS_AAA,0,0,0,0,,,,,,,,, -cHH_cSS_AAC,0,0,0,0,,,,,,,,, -cHH_cSS_AAG,0,0,0,0,,,,,,,,, -cHH_cSS_AAU,0,0,0,0,,,,,,,,, -cHH_cSS_ACA,0,0,0,0,,,,,,,,, -cHH_cSS_ACC,0,0,0,0,,,,,,,,, -cHH_cSS_ACG,0,0,0,0,,,,,,,,, -cHH_cSS_ACU,0,0,0,0,,,,,,,,, -cHH_cSS_AUA,0,0,0,0,,,,,,,,, -cHH_cSS_AUC,0,0,0,0,,,,,,,,, -cHH_cSS_AUG,0,0,0,0,,,,,,,,, -cHH_cSS_AUU,0,0,0,0,,,,,,,,, -cHH_cSS_CAA,0,0,0,0,,,,,,,,, -cHH_cSS_CAC,0,0,0,0,,,,,,,,, -cHH_cSS_CAG,0,0,0,0,,,,,,,,, -cHH_cSS_CAU,0,0,0,0,,,,,,,,, -cHH_cSS_CCA,0,0,0,0,,,,,,,,, -cHH_cSS_CCC,0,0,0,0,,,,,,,,, -cHH_cSS_CCG,0,0,0,0,,,,,,,,, -cHH_cSS_CCU,0,0,0,0,,,,,,,,, -cHH_cSS_CUA,0,0,0,0,,,,,,,,, -cHH_cSS_CUC,0,0,0,0,,,,,,,,, -cHH_cSS_CUG,0,0,0,0,,,,,,,,, -cHH_cSS_CUU,0,0,0,0,,,,,,,,, -cHH_cSS_GUA,0,0,0,0,,,,,,,,, -cHH_cSS_GUC,0,0,0,0,,,,,,,,, -cHH_cSS_GUG,0,0,0,0,,,,,,,,, -cHH_cSS_GUU,0,0,0,0,,,,,,,,, -cHH_cSS_UAA,0,0,0,0,,,,,,,,, -cHH_cSS_UAC,0,0,0,0,,,,,,,,, -cHH_cSS_UAG,0,0,0,0,,,,,,,,, -cHH_cSS_UAU,0,0,0,0,,,,,,,,, -cHH_cSS_UCA,0,0,0,0,,,,,,,,, -cHH_cSS_UCC,0,0,0,0,,,,,,,,, -cHH_cSS_UCG,0,0,0,0,,,,,,,,, -cHH_cSS_UCU,0,0,0,0,,,,,,,,, -cHH_cSS_UGA,0,0,0,0,,,,,,,,, -cHH_cSS_UGC,0,0,0,0,,,,,,,,, -cHH_cSS_UGG,0,0,0,0,,,,,,,,, -cHH_cSS_UGU,0,0,0,0,,,,,,,,, -cHH_cSS_UUA,0,0,0,0,,,,,,,,, -cHH_cSS_UUC,0,0,0,0,,,,,,,,, -cHH_cSS_UUG,0,0,0,0,,,,,,,,, -cHH_cSS_UUU,0,0,0,0,,,,,,,,, -cHH_cSW_AAA,0,0,0,0,,,,,,,,, -cHH_cSW_AAC,0,0,0,0,,,,,,,,, -cHH_cSW_AAG,0,0,0,0,,,,,,,,, -cHH_cSW_AAU,0,0,0,0,,,,,,,,, -cHH_cSW_ACA,0,0,0,0,,,,,,,,, -cHH_cSW_ACC,0,0,0,0,,,,,,,,, -cHH_cSW_ACG,0,0,0,0,,,,,,,,, -cHH_cSW_ACU,0,0,0,0,,,,,,,,, -cHH_cSW_AUA,0,0,0,0,,,,,,,,, -cHH_cSW_AUC,0,0,0,0,,,,,,,,, -cHH_cSW_AUG,0,0,0,0,,,,,,,,, -cHH_cSW_AUU,0,0,0,0,,,,,,,,, -cHH_cSW_CAA,0,0,0,0,,,,,,,,, -cHH_cSW_CAC,0,0,0,0,,,,,,,,, -cHH_cSW_CAG,0,0,0,0,,,,,,,,, -cHH_cSW_CAU,0,0,0,0,,,,,,,,, -cHH_cSW_CCA,0,0,0,0,,,,,,,,, -cHH_cSW_CCC,0,0,0,0,,,,,,,,, -cHH_cSW_CCG,0,0,0,0,,,,,,,,, -cHH_cSW_CCU,0,0,0,0,,,,,,,,, -cHH_cSW_CUA,0,0,0,0,,,,,,,,, -cHH_cSW_CUC,0,0,0,0,,,,,,,,, -cHH_cSW_CUG,0,0,0,0,,,,,,,,, -cHH_cSW_CUU,0,0,0,0,,,,,,,,, -cHH_cSW_GUA,0,0,0,0,,,,,,,,, -cHH_cSW_GUC,0,0,0,0,,,,,,,,, -cHH_cSW_GUG,0,0,0,0,,,,,,,,, -cHH_cSW_GUU,0,0,0,0,,,,,,,,, -cHH_cSW_UAA,0,0,0,0,,,,,,,,, -cHH_cSW_UAC,0,0,0,0,,,,,,,,, -cHH_cSW_UAG,0,0,0,0,,,,,,,,, -cHH_cSW_UAU,0,0,0,0,,,,,,,,, -cHH_cSW_UCA,0,0,0,0,,,,,,,,, -cHH_cSW_UCC,0,0,0,0,,,,,,,,, -cHH_cSW_UCG,0,0,0,0,,,,,,,,, -cHH_cSW_UCU,0,0,0,0,,,,,,,,, -cHH_cSW_UGA,0,0,0,0,,,,,,,,, -cHH_cSW_UGC,0,0,0,0,,,,,,,,, -cHH_cSW_UGG,0,0,0,0,,,,,,,,, -cHH_cSW_UGU,0,0,0,0,,,,,,,,, -cHH_cSW_UUA,0,0,0,0,,,,,,,,, -cHH_cSW_UUC,0,0,0,0,,,,,,,,, -cHH_cSW_UUG,0,0,0,0,,,,,,,,, -cHH_cSW_UUU,0,0,0,0,,,,,,,,, -cHH_tSH_AAA,0,0,0,0,,,,,,,,, -cHH_tSH_AAC,0,0,0,0,,,,,,,,, -cHH_tSH_AAG,0,0,0,0,,,,,,,,, -cHH_tSH_AAU,0,0,0,0,,,,,,,,, -cHH_tSH_ACA,0,0,0,0,,,,,,,,, -cHH_tSH_ACC,0,0,0,0,,,,,,,,, -cHH_tSH_ACG,0,0,0,0,,,,,,,,, -cHH_tSH_ACU,0,0,0,0,,,,,,,,, -cHH_tSH_AGC,0,0,0,0,,,,,,,,, -cHH_tSH_AUA,0,0,0,0,,,,,,,,, -cHH_tSH_AUC,0,0,0,0,,,,,,,,, -cHH_tSH_AUG,0,0,0,0,,,,,,,,, -cHH_tSH_AUU,0,0,0,0,,,,,,,,, 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-cHW_cSH_CAC,0,0,0,0,,,,,,,,, -cHW_cSH_CAG,0,0,0,0,,,,,,,,, -cHW_cSH_CAU,0,0,0,0,,,,,,,,, -cHW_cSH_CCG,0,0,0,0,,,,,,,,, -cHW_cSH_CGA,0,0,0,0,,,,,,,,, -cHW_cSH_CGC,0,0,0,0,,,,,,,,, -cHW_cSH_CGG,0,0,0,0,,,,,,,,, -cHW_cSH_CGU,0,0,0,0,,,,,,,,, -cHW_cSH_CUA,0,0,0,0,,,,,,,,, -cHW_cSH_CUC,0,0,0,0,,,,,,,,, -cHW_cSH_CUG,0,0,0,0,,,,,,,,, -cHW_cSH_CUU,0,0,0,0,,,,,,,,, -cHW_cSH_GCG,0,0,0,0,,,,,,,,, -cHW_cSH_GUG,0,0,0,0,,,,,,,,, -cHW_cSH_UCG,0,0,0,0,,,,,,,,, -cHW_cSH_UGA,0,0,0,0,,,,,,,,, -cHW_cSH_UGC,0,0,0,0,,,,,,,,, -cHW_cSH_UGG,0,0,0,0,,,,,,,,, -cHW_cSH_UGU,0,0,0,0,,,,,,,,, -cHW_cSH_UUG,0,0,0,0,,,,,,,,, -cHW_cSS_AAA,0,0,0,0,,,,,,,,, -cHW_cSS_AAC,0,0,0,0,,,,,,,,, -cHW_cSS_AAG,0,0,0,0,,,,,,,,, -cHW_cSS_AAU,0,0,0,0,,,,,,,,, -cHW_cSS_ACA,0,0,0,0,,,,,,,,, -cHW_cSS_ACC,0,0,0,0,,,,,,,,, -cHW_cSS_ACG,0,0,0,0,,,,,,,,, -cHW_cSS_ACU,0,0,0,0,,,,,,,,, -cHW_cSS_CAA,0,0,0,0,,,,,,,,, -cHW_cSS_CAC,0,0,0,0,,,,,,,,, -cHW_cSS_CAG,0,0,0,0,,,,,,,,, -cHW_cSS_CAU,0,0,0,0,,,,,,,,, -cHW_cSS_CGA,0,0,0,0,,,,,,,,, -cHW_cSS_CGC,0,0,0,0,,,,,,,,, -cHW_cSS_CGG,0,0,0,0,,,,,,,,, -cHW_cSS_CGU,0,0,0,0,,,,,,,,, -cHW_cSS_CUA,0,0,0,0,,,,,,,,, -cHW_cSS_CUC,0,0,0,0,,,,,,,,, -cHW_cSS_CUG,0,0,0,0,,,,,,,,, -cHW_cSS_CUU,0,0,0,0,,,,,,,,, -cHW_cSS_UGA,0,0,0,0,,,,,,,,, -cHW_cSS_UGC,0,0,0,0,,,,,,,,, -cHW_cSS_UGG,0,0,0,0,,,,,,,,, -cHW_cSS_UGU,0,0,0,0,,,,,,,,, -cHW_cSW_AAA,0,0,0,0,,,,,,,,, -cHW_cSW_AAC,0,0,0,0,,,,,,,,, -cHW_cSW_AAG,0,0,0,0,,,,,,,,, -cHW_cSW_AAU,0,0,0,0,,,,,,,,, -cHW_cSW_ACA,0,0,0,0,,,,,,,,, -cHW_cSW_ACC,0,0,0,0,,,,,,,,, -cHW_cSW_ACG,0,0,0,0,,,,,,,,, -cHW_cSW_ACU,0,0,0,0,,,,,,,,, -cHW_cSW_CAA,0,0,0,0,,,,,,,,, -cHW_cSW_CAC,0,0,0,0,,,,,,,,, -cHW_cSW_CAG,0,0,0,0,,,,,,,,, -cHW_cSW_CAU,0,0,0,0,,,,,,,,, -cHW_cSW_CGA,0,0,0,0,,,,,,,,, -cHW_cSW_CGC,0,0,0,0,,,,,,,,, -cHW_cSW_CGG,0,0,0,0,,,,,,,,, -cHW_cSW_CGU,0,0,0,0,,,,,,,,, -cHW_cSW_CUA,0,0,0,0,,,,,,,,, -cHW_cSW_CUC,0,0,0,0,,,,,,,,, -cHW_cSW_CUG,0,0,0,0,,,,,,,,, -cHW_cSW_CUU,0,0,0,0,,,,,,,,, -cHW_cSW_UGA,0,0,0,0,,,,,,,,, -cHW_cSW_UGC,0,0,0,0,,,,,,,,, -cHW_cSW_UGG,0,0,0,0,,,,,,,,, -cHW_cSW_UGU,0,0,0,0,,,,,,,,, -cHW_tHH_AAA,0,0,0,0,,,,,,,,, -cHW_tHH_AAC,0,0,0,0,,,,,,,,, -cHW_tHH_AAG,0,0,0,0,,,,,,,,, -cHW_tHH_AAU,0,0,0,0,,,,,,,,, -cHW_tHH_ACA,0,0,0,0,,,,,,,,, -cHW_tHH_ACC,0,0,0,0,,,,,,,,, -cHW_tHH_ACG,0,0,0,0,,,,,,,,, -cHW_tHH_ACU,0,0,0,0,,,,,,,,, -cHW_tHH_AGU,0,0,0,0,,,,,,,,, -cHW_tHH_AUG,0,0,0,0,,,,,,,,, -cHW_tHH_AUU,0,0,0,0,,,,,,,,, -cHW_tHH_CAA,0,0,0,0,,,,,,,,, -cHW_tHH_CAC,0,0,0,0,,,,,,,,, -cHW_tHH_CAG,0,0,0,0,,,,,,,,, -cHW_tHH_CAU,0,0,0,0,,,,,,,,, -cHW_tHH_CCC,0,0,0,0,,,,,,,,, -cHW_tHH_CGA,0,0,0,0,,,,,,,,, -cHW_tHH_CGC,0,0,0,0,,,,,,,,, -cHW_tHH_CGG,0,0,0,0,,,,,,,,, -cHW_tHH_CGU,0,0,0,0,,,,,,,,, -cHW_tHH_CUA,0,0,0,0,,,,,,,,, -cHW_tHH_CUC,0,0,0,0,,,,,,,,, -cHW_tHH_CUG,0,0,0,0,,,,,,,,, -cHW_tHH_CUU,0,0,0,0,,,,,,,,, -cHW_tHH_GCC,0,0,0,0,,,,,,,,, -cHW_tHH_GGU,0,0,0,0,,,,,,,,, -cHW_tHH_GUG,0,0,0,0,,,,,,,,, -cHW_tHH_GUU,0,0,0,0,,,,,,,,, -cHW_tHH_UCC,0,0,0,0,,,,,,,,, -cHW_tHH_UGA,0,0,0,0,,,,,,,,, -cHW_tHH_UGC,0,0,0,0,,,,,,,,, -cHW_tHH_UGG,0,0,0,0,,,,,,,,, -cHW_tHH_UGU,0,0,0,0,,,,,,,,, -cHW_tHH_UUG,0,0,0,0,,,,,,,,, -cHW_tHH_UUU,0,0,0,0,,,,,,,,, -cHW_tHS_AAA,0,0,0,0,,,,,,,,, -cHW_tHS_AAC,0,0,0,0,,,,,,,,, -cHW_tHS_AAG,0,0,0,0,,,,,,,,, -cHW_tHS_AAU,0,0,0,0,,,,,,,,, -cHW_tHS_ACA,0,0,0,0,,,,,,,,, -cHW_tHS_ACC,0,0,0,0,,,,,,,,, -cHW_tHS_ACG,0,0,0,0,,,,,,,,, -cHW_tHS_ACU,0,0,0,0,,,,,,,,, -cHW_tHS_AGA,0,0,0,0,,,,,,,,, -cHW_tHS_AGC,0,0,0,0,,,,,,,,, -cHW_tHS_AGU,0,0,0,0,,,,,,,,, -cHW_tHS_AUC,0,0,0,0,,,,,,,,, -cHW_tHS_AUU,0,0,0,0,,,,,,,,, -cHW_tHS_CAA,0,0,0,0,,,,,,,,, -cHW_tHS_CAC,0,0,0,0,,,,,,,,, -cHW_tHS_CAG,0,0,0,0,,,,,,,,, -cHW_tHS_CAU,0,0,0,0,,,,,,,,, -cHW_tHS_CCG,0,0,0,0,,,,,,,,, -cHW_tHS_CGA,0,0,0,0,,,,,,,,, -cHW_tHS_CGC,0,0,0,0,,,,,,,,, -cHW_tHS_CGG,0,0,0,0,,,,,,,,, -cHW_tHS_CGU,0,0,0,0,,,,,,,,, -cHW_tHS_CUA,0,0,0,0,,,,,,,,, -cHW_tHS_CUC,0,0,0,0,,,,,,,,, -cHW_tHS_CUG,0,0,0,0,,,,,,,,, -cHW_tHS_CUU,0,0,0,0,,,,,,,,, -cHW_tHS_GCG,0,0,0,0,,,,,,,,, -cHW_tHS_GGA,0,0,0,0,,,,,,,,, -cHW_tHS_GGC,0,0,0,0,,,,,,,,, -cHW_tHS_GGU,0,0,0,0,,,,,,,,, -cHW_tHS_GUC,0,0,0,0,,,,,,,,, -cHW_tHS_GUU,0,0,0,0,,,,,,,,, -cHW_tHS_UCG,0,0,0,0,,,,,,,,, -cHW_tHS_UGA,0,0,0,0,,,,,,,,, -cHW_tHS_UGC,0,0,0,0,,,,,,,,, -cHW_tHS_UGG,0,0,0,0,,,,,,,,, -cHW_tHS_UGU,0,0,0,0,,,,,,,,, -cHW_tHS_UUC,0,0,0,0,,,,,,,,, -cHW_tHS_UUU,0,0,0,0,,,,,,,,, -cHW_tHW_AAA,0,0,0,0,,,,,,,,, -cHW_tHW_AAC,0,0,0,0,,,,,,,,, -cHW_tHW_AAG,0,0,0,0,,,,,,,,, -cHW_tHW_AAU,0,0,0,0,,,,,,,,, -cHW_tHW_ACA,0,0,0,0,,,,,,,,, -cHW_tHW_ACC,0,0,0,0,,,,,,,,, -cHW_tHW_ACG,0,0,0,0,,,,,,,,, -cHW_tHW_ACU,0,0,0,0,,,,,,,,, -cHW_tHW_AUA,0,0,0,0,,,,,,,,, -cHW_tHW_AUC,0,0,0,0,,,,,,,,, -cHW_tHW_CAA,0,0,0,0,,,,,,,,, -cHW_tHW_CAC,0,0,0,0,,,,,,,,, -cHW_tHW_CAG,0,0,0,0,,,,,,,,, -cHW_tHW_CAU,0,0,0,0,,,,,,,,, -cHW_tHW_CCA,0,0,0,0,,,,,,,,, -cHW_tHW_CCG,0,0,0,0,,,,,,,,, -cHW_tHW_CCU,0,0,0,0,,,,,,,,, -cHW_tHW_CGA,0,0,0,0,,,,,,,,, -cHW_tHW_CGC,0,0,0,0,,,,,,,,, -cHW_tHW_CGG,0,0,0,0,,,,,,,,, -cHW_tHW_CGU,0,0,0,0,,,,,,,,, -cHW_tHW_CUA,0,0,0,0,,,,,,,,, -cHW_tHW_CUC,0,0,0,0,,,,,,,,, -cHW_tHW_CUG,0,0,0,0,,,,,,,,, -cHW_tHW_CUU,0,0,0,0,,,,,,,,, -cHW_tHW_GAG,0,0,0,0,,,,,,,,, -cHW_tHW_GCA,0,0,0,0,,,,,,,,, -cHW_tHW_GCG,0,0,0,0,,,,,,,,, -cHW_tHW_GCU,0,0,0,0,,,,,,,,, -cHW_tHW_GUA,0,0,0,0,,,,,,,,, -cHW_tHW_GUC,0,0,0,0,,,,,,,,, -cHW_tHW_UAG,0,0,0,0,,,,,,,,, -cHW_tHW_UCA,0,0,0,0,,,,,,,,, -cHW_tHW_UCG,0,0,0,0,,,,,,,,, -cHW_tHW_UCU,0,0,0,0,,,,,,,,, -cHW_tHW_UGA,0,0,0,0,,,,,,,,, -cHW_tHW_UGC,0,0,0,0,,,,,,,,, -cHW_tHW_UGG,0,0,0,0,,,,,,,,, -cHW_tHW_UGU,0,0,0,0,,,,,,,,, -cHW_tHW_UUA,0,0,0,0,,,,,,,,, -cHW_tHW_UUC,0,0,0,0,,,,,,,,, -cHW_tSH_AAA,0,0,0,0,,,,,,,,, -cHW_tSH_AAC,0,0,0,0,,,,,,,,, -cHW_tSH_AAG,0,0,0,0,,,,,,,,, -cHW_tSH_AAU,0,0,0,0,,,,,,,,, -cHW_tSH_ACA,0,0,0,0,,,,,,,,, -cHW_tSH_ACC,0,0,0,0,,,,,,,,, -cHW_tSH_ACG,0,0,0,0,,,,,,,,, -cHW_tSH_ACU,0,0,0,0,,,,,,,,, -cHW_tSH_AGC,0,0,0,0,,,,,,,,, -cHW_tSH_AUG,0,0,0,0,,,,,,,,, -cHW_tSH_AUU,0,0,0,0,,,,,,,,, -cHW_tSH_CAA,0,0,0,0,,,,,,,,, -cHW_tSH_CAC,0,0,0,0,,,,,,,,, -cHW_tSH_CAG,0,0,0,0,,,,,,,,, -cHW_tSH_CAU,0,0,0,0,,,,,,,,, -cHW_tSH_CCG,0,0,0,0,,,,,,,,, -cHW_tSH_CCU,0,0,0,0,,,,,,,,, -cHW_tSH_CGA,0,0,0,0,,,,,,,,, -cHW_tSH_CGC,0,0,0,0,,,,,,,,, -cHW_tSH_CGG,0,0,0,0,,,,,,,,, -cHW_tSH_CGU,0,0,0,0,,,,,,,,, -cHW_tSH_CUA,0,0,0,0,,,,,,,,, -cHW_tSH_CUC,0,0,0,0,,,,,,,,, -cHW_tSH_CUG,0,0,0,0,,,,,,,,, -cHW_tSH_CUU,0,0,0,0,,,,,,,,, -cHW_tSH_GAG,0,0,0,0,,,,,,,,, -cHW_tSH_GCG,0,0,0,0,,,,,,,,, -cHW_tSH_GCU,0,0,0,0,,,,,,,,, -cHW_tSH_GGC,0,0,0,0,,,,,,,,, -cHW_tSH_GUG,0,0,0,0,,,,,,,,, -cHW_tSH_GUU,0,0,0,0,,,,,,,,, -cHW_tSH_UAG,0,0,0,0,,,,,,,,, -cHW_tSH_UCG,0,0,0,0,,,,,,,,, -cHW_tSH_UCU,0,0,0,0,,,,,,,,, -cHW_tSH_UGA,0,0,0,0,,,,,,,,, -cHW_tSH_UGC,0,0,0,0,,,,,,,,, -cHW_tSH_UGG,0,0,0,0,,,,,,,,, -cHW_tSH_UGU,0,0,0,0,,,,,,,,, -cHW_tSH_UUG,0,0,0,0,,,,,,,,, -cHW_tSH_UUU,0,0,0,0,,,,,,,,, -cHW_tSW_AAA,0,0,0,0,,,,,,,,, -cHW_tSW_AAC,0,0,0,0,,,,,,,,, -cHW_tSW_AAG,0,0,0,0,,,,,,,,, -cHW_tSW_AAU,0,0,0,0,,,,,,,,, -cHW_tSW_ACA,0,0,0,0,,,,,,,,, -cHW_tSW_ACC,0,0,0,0,,,,,,,,, -cHW_tSW_ACG,0,0,0,0,,,,,,,,, -cHW_tSW_ACU,0,0,0,0,,,,,,,,, -cHW_tSW_AGG,0,0,0,0,,,,,,,,, -cHW_tSW_CAA,0,0,0,0,,,,,,,,, -cHW_tSW_CAC,0,0,0,0,,,,,,,,, -cHW_tSW_CAG,0,0,0,0,,,,,,,,, -cHW_tSW_CAU,0,0,0,0,,,,,,,,, -cHW_tSW_CGA,0,0,0,0,,,,,,,,, -cHW_tSW_CGC,0,0,0,0,,,,,,,,, -cHW_tSW_CGG,0,0,0,0,,,,,,,,, -cHW_tSW_CGU,0,0,0,0,,,,,,,,, -cHW_tSW_CUA,0,0,0,0,,,,,,,,, -cHW_tSW_CUC,0,0,0,0,,,,,,,,, -cHW_tSW_CUG,0,0,0,0,,,,,,,,, -cHW_tSW_CUU,0,0,0,0,,,,,,,,, -cHW_tSW_GAG,0,0,0,0,,,,,,,,, -cHW_tSW_GGG,0,0,0,0,,,,,,,,, -cHW_tSW_UAG,0,0,0,0,,,,,,,,, -cHW_tSW_UGA,0,0,0,0,,,,,,,,, -cHW_tSW_UGC,0,0,0,0,,,,,,,,, -cHW_tSW_UGG,0,0,0,0,,,,,,,,, -cHW_tSW_UGU,0,0,0,0,,,,,,,,, -cHW_tSS_AAA,0,0,0,0,,,,,,,,, -cHW_tSS_AAC,0,0,0,0,,,,,,,,, -cHW_tSS_AAG,0,0,0,0,,,,,,,,, -cHW_tSS_AAU,0,0,0,0,,,,,,,,, -cHW_tSS_ACA,0,0,0,0,,,,,,,,, -cHW_tSS_ACC,0,0,0,0,,,,,,,,, -cHW_tSS_ACG,0,0,0,0,,,,,,,,, -cHW_tSS_ACU,0,0,0,0,,,,,,,,, -cHW_tSS_AGC,0,0,0,0,,,,,,,,, -cHW_tSS_AGU,0,0,0,0,,,,,,,,, -cHW_tSS_AUC,0,0,0,0,,,,,,,,, -cHW_tSS_AUU,0,0,0,0,,,,,,,,, -cHW_tSS_CAA,0,0,0,0,,,,,,,,, -cHW_tSS_CAC,0,0,0,0,,,,,,,,, -cHW_tSS_CAG,0,0,0,0,,,,,,,,, -cHW_tSS_CAU,0,0,0,0,,,,,,,,, -cHW_tSS_CCC,0,0,0,0,,,,,,,,, -cHW_tSS_CCU,0,0,0,0,,,,,,,,, -cHW_tSS_CGA,0,0,0,0,,,,,,,,, -cHW_tSS_CGC,0,0,0,0,,,,,,,,, -cHW_tSS_CGG,0,0,0,0,,,,,,,,, -cHW_tSS_CGU,0,0,0,0,,,,,,,,, -cHW_tSS_CUA,0,0,0,0,,,,,,,,, -cHW_tSS_CUC,0,0,0,0,,,,,,,,, -cHW_tSS_CUG,0,0,0,0,,,,,,,,, -cHW_tSS_CUU,0,0,0,0,,,,,,,,, -cHW_tSS_GAC,0,0,0,0,,,,,,,,, -cHW_tSS_GAU,0,0,0,0,,,,,,,,, -cHW_tSS_GCC,0,0,0,0,,,,,,,,, -cHW_tSS_GCU,0,0,0,0,,,,,,,,, -cHW_tSS_GGC,0,0,0,0,,,,,,,,, -cHW_tSS_GGU,0,0,0,0,,,,,,,,, -cHW_tSS_GUC,0,0,0,0,,,,,,,,, -cHW_tSS_GUU,0,0,0,0,,,,,,,,, -cHW_tSS_UAC,0,0,0,0,,,,,,,,, -cHW_tSS_UAU,0,0,0,0,,,,,,,,, -cHW_tSS_UCC,0,0,0,0,,,,,,,,, -cHW_tSS_UCU,0,0,0,0,,,,,,,,, -cHW_tSS_UGA,0,0,0,0,,,,,,,,, -cHW_tSS_UGC,0,0,0,0,,,,,,,,, -cHW_tSS_UGG,0,0,0,0,,,,,,,,, -cHW_tSS_UGU,0,0,0,0,,,,,,,,, -cHW_tSS_UUC,0,0,0,0,,,,,,,,, -cHW_tSS_UUU,0,0,0,0,,,,,,,,, -cSH_cSH_ACG,0,0,0,0,,,,,,,,, -cSH_cSH_AUG,0,0,0,0,,,,,,,,, -cSH_cSH_CCG,0,0,0,0,,,,,,,,, -cSH_cSH_CGA,0,0,0,0,,,,,,,,, -cSH_cSH_CGC,0,0,0,0,,,,,,,,, -cSH_cSH_CGG,0,0,0,0,,,,,,,,, -cSH_cSH_CGU,0,0,0,0,,,,,,,,, -cSH_cSH_CUG,0,0,0,0,,,,,,,,, -cSH_cSH_GCG,0,0,0,0,,,,,,,,, -cSH_cSH_GUG,0,0,0,0,,,,,,,,, -cSH_cSH_UCG,0,0,0,0,,,,,,,,, -cSH_cSH_UGA,0,0,0,0,,,,,,,,, -cSH_cSH_UGC,0,0,0,0,,,,,,,,, -cSH_cSH_UGG,0,0,0,0,,,,,,,,, -cSH_cSH_UGU,0,0,0,0,,,,,,,,, -cSH_cSH_UUG,0,0,0,0,,,,,,,,, -cSH_cSS_CGA,0,0,0,0,,,,,,,,, -cSH_cSS_CGC,0,0,0,0,,,,,,,,, -cSH_cSS_CGG,0,0,0,0,,,,,,,,, -cSH_cSS_CGU,0,0,0,0,,,,,,,,, -cSH_cSS_UGA,0,0,0,0,,,,,,,,, -cSH_cSS_UGC,0,0,0,0,,,,,,,,, -cSH_cSS_UGG,0,0,0,0,,,,,,,,, -cSH_cSS_UGU,0,0,0,0,,,,,,,,, -cSH_cSW_CGA,0,0,0,0,,,,,,,,, -cSH_cSW_CGC,0,0,0,0,,,,,,,,, -cSH_cSW_CGG,0,0,0,0,,,,,,,,, -cSH_cSW_CGU,0,0,0,0,,,,,,,,, -cSH_cSW_UGA,0,0,0,0,,,,,,,,, -cSH_cSW_UGC,0,0,0,0,,,,,,,,, -cSH_cSW_UGG,0,0,0,0,,,,,,,,, -cSH_cSW_UGU,0,0,0,0,,,,,,,,, -cSH_tSH_AAG,0,0,0,0,,,,,,,,, -cSH_tSH_ACG,0,0,0,0,,,,,,,,, -cSH_tSH_ACU,0,0,0,0,,,,,,,,, -cSH_tSH_AGC,0,0,0,0,,,,,,,,, -cSH_tSH_AUG,0,0,0,0,,,,,,,,, -cSH_tSH_AUU,0,0,0,0,,,,,,,,, -cSH_tSH_CAG,0,0,0,0,,,,,,,,, -cSH_tSH_CCG,0,0,0,0,,,,,,,,, -cSH_tSH_CCU,0,0,0,0,,,,,,,,, -cSH_tSH_CGA,0,0,0,0,,,,,,,,, -cSH_tSH_CGC,0,0,0,0,,,,,,,,, -cSH_tSH_CGG,0,0,0,0,,,,,,,,, -cSH_tSH_CGU,0,0,0,0,,,,,,,,, -cSH_tSH_CUG,0,0,0,0,,,,,,,,, -cSH_tSH_CUU,0,0,0,0,,,,,,,,, -cSH_tSH_GAG,0,0,0,0,,,,,,,,, -cSH_tSH_GCG,0,0,0,0,,,,,,,,, -cSH_tSH_GCU,0,0,0,0,,,,,,,,, -cSH_tSH_GGC,0,0,0,0,,,,,,,,, -cSH_tSH_GUG,0,0,0,0,,,,,,,,, -cSH_tSH_GUU,0,0,0,0,,,,,,,,, -cSH_tSH_UAG,0,0,0,0,,,,,,,,, -cSH_tSH_UCG,0,0,0,0,,,,,,,,, -cSH_tSH_UCU,0,0,0,0,,,,,,,,, -cSH_tSH_UGA,0,0,0,0,,,,,,,,, -cSH_tSH_UGC,0,0,0,0,,,,,,,,, -cSH_tSH_UGG,0,0,0,0,,,,,,,,, -cSH_tSH_UGU,0,0,0,0,,,,,,,,, -cSH_tSH_UUG,0,0,0,0,,,,,,,,, -cSH_tSH_UUU,0,0,0,0,,,,,,,,, -cSH_tSS_ACA,0,0,0,0,,,,,,,,, -cSH_tSS_ACC,0,0,0,0,,,,,,,,, -cSH_tSS_ACG,0,0,0,0,,,,,,,,, -cSH_tSS_ACU,0,0,0,0,,,,,,,,, -cSH_tSS_AUA,0,0,0,0,,,,,,,,, -cSH_tSS_AUC,0,0,0,0,,,,,,,,, -cSH_tSS_AUG,0,0,0,0,,,,,,,,, -cSH_tSS_AUU,0,0,0,0,,,,,,,,, -cSH_tSS_CCA,0,0,0,0,,,,,,,,, -cSH_tSS_CCC,0,0,0,0,,,,,,,,, -cSH_tSS_CCG,0,0,0,0,,,,,,,,, -cSH_tSS_CCU,0,0,0,0,,,,,,,,, -cSH_tSS_CGA,0,0,0,0,,,,,,,,, -cSH_tSS_CGC,0,0,0,0,,,,,,,,, -cSH_tSS_CGG,0,0,0,0,,,,,,,,, -cSH_tSS_CGU,0,0,0,0,,,,,,,,, -cSH_tSS_CUA,0,0,0,0,,,,,,,,, -cSH_tSS_CUC,0,0,0,0,,,,,,,,, -cSH_tSS_CUG,0,0,0,0,,,,,,,,, -cSH_tSS_CUU,0,0,0,0,,,,,,,,, -cSH_tSS_GCA,0,0,0,0,,,,,,,,, -cSH_tSS_GCC,0,0,0,0,,,,,,,,, -cSH_tSS_GCG,0,0,0,0,,,,,,,,, -cSH_tSS_GCU,0,0,0,0,,,,,,,,, -cSH_tSS_GUA,0,0,0,0,,,,,,,,, -cSH_tSS_GUC,0,0,0,0,,,,,,,,, -cSH_tSS_GUG,0,0,0,0,,,,,,,,, -cSH_tSS_GUU,0,0,0,0,,,,,,,,, -cSH_tSS_UCA,0,0,0,0,,,,,,,,, -cSH_tSS_UCC,0,0,0,0,,,,,,,,, -cSH_tSS_UCG,0,0,0,0,,,,,,,,, -cSH_tSS_UCU,0,0,0,0,,,,,,,,, -cSH_tSS_UGA,0,0,0,0,,,,,,,,, -cSH_tSS_UGC,0,0,0,0,,,,,,,,, -cSH_tSS_UGG,0,0,0,0,,,,,,,,, -cSH_tSS_UGU,0,0,0,0,,,,,,,,, -cSH_tSS_UUA,0,0,0,0,,,,,,,,, -cSH_tSS_UUC,0,0,0,0,,,,,,,,, -cSH_tSS_UUG,0,0,0,0,,,,,,,,, -cSH_tSS_UUU,0,0,0,0,,,,,,,,, -cSH_tSW_AAG,0,0,0,0,,,,,,,,, -cSH_tSW_AGG,0,0,0,0,,,,,,,,, -cSH_tSW_CAG,0,0,0,0,,,,,,,,, -cSH_tSW_CGA,0,0,0,0,,,,,,,,, -cSH_tSW_CGC,0,0,0,0,,,,,,,,, -cSH_tSW_CGG,0,0,0,0,,,,,,,,, -cSH_tSW_CGU,0,0,0,0,,,,,,,,, -cSH_tSW_GAG,0,0,0,0,,,,,,,,, -cSH_tSW_GGG,0,0,0,0,,,,,,,,, -cSH_tSW_UAG,0,0,0,0,,,,,,,,, -cSH_tSW_UGA,0,0,0,0,,,,,,,,, -cSH_tSW_UGC,0,0,0,0,,,,,,,,, -cSH_tSW_UGG,0,0,0,0,,,,,,,,, -cSH_tSW_UGU,0,0,0,0,,,,,,,,, -cSW_cHH_AAA,0,0,0,0,,,,,,,,, -cSW_cHH_AAC,0,0,0,0,,,,,,,,, -cSW_cHH_AAU,0,0,0,0,,,,,,,,, -cSW_cHH_ACA,0,0,0,0,,,,,,,,, -cSW_cHH_ACC,0,0,0,0,,,,,,,,, -cSW_cHH_ACU,0,0,0,0,,,,,,,,, -cSW_cHH_AGU,0,0,0,0,,,,,,,,, -cSW_cHH_AUA,0,0,0,0,,,,,,,,, -cSW_cHH_AUC,0,0,0,0,,,,,,,,, -cSW_cHH_AUG,0,0,0,0,,,,,,,,, -cSW_cHH_AUU,0,0,0,0,,,,,,,,, -cSW_cHH_CAA,0,0,0,0,,,,,,,,, -cSW_cHH_CAC,0,0,0,0,,,,,,,,, -cSW_cHH_CAU,0,0,0,0,,,,,,,,, -cSW_cHH_CCA,0,0,0,0,,,,,,,,, -cSW_cHH_CCC,0,0,0,0,,,,,,,,, -cSW_cHH_CCU,0,0,0,0,,,,,,,,, -cSW_cHH_CGU,0,0,0,0,,,,,,,,, -cSW_cHH_CUA,0,0,0,0,,,,,,,,, -cSW_cHH_CUC,0,0,0,0,,,,,,,,, -cSW_cHH_CUG,0,0,0,0,,,,,,,,, -cSW_cHH_CUU,0,0,0,0,,,,,,,,, -cSW_cHH_GAA,0,0,0,0,,,,,,,,, -cSW_cHH_GAC,0,0,0,0,,,,,,,,, -cSW_cHH_GAU,0,0,0,0,,,,,,,,, -cSW_cHH_GCA,0,0,0,0,,,,,,,,, -cSW_cHH_GCC,0,0,0,0,,,,,,,,, -cSW_cHH_GCU,0,0,0,0,,,,,,,,, -cSW_cHH_GGU,0,0,0,0,,,,,,,,, -cSW_cHH_GUA,0,0,0,0,,,,,,,,, -cSW_cHH_GUC,0,0,0,0,,,,,,,,, -cSW_cHH_GUG,0,0,0,0,,,,,,,,, -cSW_cHH_GUU,0,0,0,0,,,,,,,,, -cSW_cHH_UAA,0,0,0,0,,,,,,,,, -cSW_cHH_UAC,0,0,0,0,,,,,,,,, -cSW_cHH_UAU,0,0,0,0,,,,,,,,, -cSW_cHH_UCA,0,0,0,0,,,,,,,,, -cSW_cHH_UCC,0,0,0,0,,,,,,,,, -cSW_cHH_UCU,0,0,0,0,,,,,,,,, -cSW_cHH_UGU,0,0,0,0,,,,,,,,, -cSW_cHH_UUA,0,0,0,0,,,,,,,,, -cSW_cHH_UUC,0,0,0,0,,,,,,,,, -cSW_cHH_UUG,0,0,0,0,,,,,,,,, -cSW_cHH_UUU,0,0,0,0,,,,,,,,, -cSW_cHS_AGC,0,0,0,0,,,,,,,,, -cSW_cHS_AGU,0,0,0,0,,,,,,,,, -cSW_cHS_CGC,0,0,0,0,,,,,,,,, -cSW_cHS_CGU,0,0,0,0,,,,,,,,, -cSW_cHS_GGC,0,0,0,0,,,,,,,,, -cSW_cHS_GGU,0,0,0,0,,,,,,,,, -cSW_cHS_UGC,0,0,0,0,,,,,,,,, -cSW_cHS_UGU,0,0,0,0,,,,,,,,, -cSW_cHW_AAA,0,0,0,0,,,,,,,,, -cSW_cHW_AAC,0,0,0,0,,,,,,,,, -cSW_cHW_ACA,0,0,0,0,,,,,,,,, -cSW_cHW_ACG,0,0,0,0,,,,,,,,, -cSW_cHW_ACU,0,0,0,0,,,,,,,,, -cSW_cHW_AUG,0,0,0,0,,,,,,,,, -cSW_cHW_CAA,0,0,0,0,,,,,,,,, -cSW_cHW_CAC,0,0,0,0,,,,,,,,, -cSW_cHW_CCA,0,0,0,0,,,,,,,,, -cSW_cHW_CCG,0,0,0,0,,,,,,,,, -cSW_cHW_CCU,0,0,0,0,,,,,,,,, -cSW_cHW_CUG,0,0,0,0,,,,,,,,, -cSW_cHW_GAA,0,0,0,0,,,,,,,,, -cSW_cHW_GAC,0,0,0,0,,,,,,,,, -cSW_cHW_GCA,0,0,0,0,,,,,,,,, -cSW_cHW_GCG,0,0,0,0,,,,,,,,, -cSW_cHW_GCU,0,0,0,0,,,,,,,,, -cSW_cHW_GUG,0,0,0,0,,,,,,,,, -cSW_cHW_UAA,0,0,0,0,,,,,,,,, -cSW_cHW_UAC,0,0,0,0,,,,,,,,, -cSW_cHW_UCA,0,0,0,0,,,,,,,,, -cSW_cHW_UCG,0,0,0,0,,,,,,,,, -cSW_cHW_UCU,0,0,0,0,,,,,,,,, -cSW_cHW_UUG,0,0,0,0,,,,,,,,, -cSW_cSH_ACG,0,0,0,0,,,,,,,,, -cSW_cSH_AUG,0,0,0,0,,,,,,,,, -cSW_cSH_CCG,0,0,0,0,,,,,,,,, -cSW_cSH_CUG,0,0,0,0,,,,,,,,, -cSW_cSH_GCG,0,0,0,0,,,,,,,,, -cSW_cSH_GUG,0,0,0,0,,,,,,,,, -cSW_cSH_UCG,0,0,0,0,,,,,,,,, -cSW_cSH_UUG,0,0,0,0,,,,,,,,, -cSW_tHH_ACC,0,0,0,0,,,,,,,,, -cSW_tHH_AGU,0,0,0,0,,,,,,,,, -cSW_tHH_AUG,0,0,0,0,,,,,,,,, -cSW_tHH_AUU,0,0,0,0,,,,,,,,, -cSW_tHH_CCC,0,0,0,0,,,,,,,,, -cSW_tHH_CGU,0,0,0,0,,,,,,,,, -cSW_tHH_CUG,0,0,0,0,,,,,,,,, -cSW_tHH_CUU,0,0,0,0,,,,,,,,, -cSW_tHH_GCC,0,0,0,0,,,,,,,,, -cSW_tHH_GGU,0,0,0,0,,,,,,,,, -cSW_tHH_GUG,0,0,0,0,,,,,,,,, -cSW_tHH_GUU,0,0,0,0,,,,,,,,, -cSW_tHH_UCC,0,0,0,0,,,,,,,,, -cSW_tHH_UGU,0,0,0,0,,,,,,,,, -cSW_tHH_UUG,0,0,0,0,,,,,,,,, -cSW_tHH_UUU,0,0,0,0,,,,,,,,, -cSW_tHS_ACG,0,0,0,0,,,,,,,,, -cSW_tHS_AGA,0,0,0,0,,,,,,,,, -cSW_tHS_AGC,0,0,0,0,,,,,,,,, -cSW_tHS_AGU,0,0,0,0,,,,,,,,, -cSW_tHS_AUC,0,0,0,0,,,,,,,,, -cSW_tHS_AUU,0,0,0,0,,,,,,,,, -cSW_tHS_CCG,0,0,0,0,,,,,,,,, -cSW_tHS_CGA,0,0,0,0,,,,,,,,, -cSW_tHS_CGC,0,0,0,0,,,,,,,,, -cSW_tHS_CGU,0,0,0,0,,,,,,,,, -cSW_tHS_CUC,0,0,0,0,,,,,,,,, -cSW_tHS_CUU,0,0,0,0,,,,,,,,, -cSW_tHS_GCG,0,0,0,0,,,,,,,,, -cSW_tHS_GGA,0,0,0,0,,,,,,,,, -cSW_tHS_GGC,0,0,0,0,,,,,,,,, -cSW_tHS_GGU,0,0,0,0,,,,,,,,, -cSW_tHS_GUC,0,0,0,0,,,,,,,,, -cSW_tHS_GUU,0,0,0,0,,,,,,,,, -cSW_tHS_UCG,0,0,0,0,,,,,,,,, -cSW_tHS_UGA,0,0,0,0,,,,,,,,, -cSW_tHS_UGC,0,0,0,0,,,,,,,,, -cSW_tHS_UGU,0,0,0,0,,,,,,,,, -cSW_tHS_UUC,0,0,0,0,,,,,,,,, -cSW_tHS_UUU,0,0,0,0,,,,,,,,, -cSW_tHW_AAG,0,0,0,0,,,,,,,,, -cSW_tHW_ACA,0,0,0,0,,,,,,,,, -cSW_tHW_ACG,0,0,0,0,,,,,,,,, -cSW_tHW_ACU,0,0,0,0,,,,,,,,, -cSW_tHW_AUA,0,0,0,0,,,,,,,,, -cSW_tHW_AUC,0,0,0,0,,,,,,,,, -cSW_tHW_CAG,0,0,0,0,,,,,,,,, -cSW_tHW_CCA,0,0,0,0,,,,,,,,, -cSW_tHW_CCG,0,0,0,0,,,,,,,,, -cSW_tHW_CCU,0,0,0,0,,,,,,,,, -cSW_tHW_CUA,0,0,0,0,,,,,,,,, -cSW_tHW_CUC,0,0,0,0,,,,,,,,, -cSW_tHW_GAG,0,0,0,0,,,,,,,,, -cSW_tHW_GCA,0,0,0,0,,,,,,,,, -cSW_tHW_GCG,0,0,0,0,,,,,,,,, -cSW_tHW_GCU,0,0,0,0,,,,,,,,, -cSW_tHW_GUA,0,0,0,0,,,,,,,,, -cSW_tHW_GUC,0,0,0,0,,,,,,,,, -cSW_tHW_UAG,0,0,0,0,,,,,,,,, -cSW_tHW_UCA,0,0,0,0,,,,,,,,, -cSW_tHW_UCG,0,0,0,0,,,,,,,,, -cSW_tHW_UCU,0,0,0,0,,,,,,,,, -cSW_tHW_UUA,0,0,0,0,,,,,,,,, -cSW_tHW_UUC,0,0,0,0,,,,,,,,, -cSW_tSH_AAG,0,0,0,0,,,,,,,,, -cSW_tSH_ACG,0,0,0,0,,,,,,,,, -cSW_tSH_ACU,0,0,0,0,,,,,,,,, -cSW_tSH_AGC,0,0,0,0,,,,,,,,, -cSW_tSH_AUG,0,0,0,0,,,,,,,,, -cSW_tSH_AUU,0,0,0,0,,,,,,,,, -cSW_tSH_CAG,0,0,0,0,,,,,,,,, -cSW_tSH_CCG,0,0,0,0,,,,,,,,, -cSW_tSH_CCU,0,0,0,0,,,,,,,,, -cSW_tSH_CGC,0,0,0,0,,,,,,,,, -cSW_tSH_CUG,0,0,0,0,,,,,,,,, -cSW_tSH_CUU,0,0,0,0,,,,,,,,, -cSW_tSH_GAG,0,0,0,0,,,,,,,,, -cSW_tSH_GCG,0,0,0,0,,,,,,,,, -cSW_tSH_GCU,0,0,0,0,,,,,,,,, -cSW_tSH_GGC,0,0,0,0,,,,,,,,, -cSW_tSH_GUG,0,0,0,0,,,,,,,,, -cSW_tSH_GUU,0,0,0,0,,,,,,,,, -cSW_tSH_UAG,0,0,0,0,,,,,,,,, -cSW_tSH_UCG,0,0,0,0,,,,,,,,, -cSW_tSH_UCU,0,0,0,0,,,,,,,,, -cSW_tSH_UGC,0,0,0,0,,,,,,,,, -cSW_tSH_UUG,0,0,0,0,,,,,,,,, -cSW_tSH_UUU,0,0,0,0,,,,,,,,, -cSW_tSW_AAG,0,0,0,0,,,,,,,,, -cSW_tSW_AGG,0,0,0,0,,,,,,,,, -cSW_tSW_CAG,0,0,0,0,,,,,,,,, -cSW_tSW_CGG,0,0,0,0,,,,,,,,, -cSW_tSW_GAG,0,0,0,0,,,,,,,,, -cSW_tSW_GGG,0,0,0,0,,,,,,,,, -cSW_tSW_UAG,0,0,0,0,,,,,,,,, -cSW_tSW_UGG,0,0,0,0,,,,,,,,, -cSW_tSS_AAC,0,0,0,0,,,,,,,,, -cSW_tSS_AAU,0,0,0,0,,,,,,,,, -cSW_tSS_ACC,0,0,0,0,,,,,,,,, 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-cWW_tHH_GGU,0,0,0,0,,,,,,,,, -cWW_tHH_GUG,0,0,0,0,,,,,,,,, -cWW_tHH_GUU,0,0,0,0,,,,,,,,, -cWW_tHH_UCC,0,0,0,0,,,,,,,,, -cWW_tHH_UGU,0,0,0,0,,,,,,,,, -cWW_tHH_UUG,0,0,0,0,,,,,,,,, -cWW_tHH_UUU,0,0,0,0,,,,,,,,, -cWW_tHS_ACG,0,0,0,0,,,,,,,,, -cWW_tHS_AGA,0,0,0,0,,,,,,,,, -cWW_tHS_AGC,0,0,0,0,,,,,,,,, -cWW_tHS_AGU,0,0,0,0,,,,,,,,, -cWW_tHS_AUC,0,0,0,0,,,,,,,,, -cWW_tHS_AUU,0,0,0,0,,,,,,,,, -cWW_tHS_CCG,0,0,0,0,,,,,,,,, -cWW_tHS_CGA,0,0,0,0,,,,,,,,, -cWW_tHS_CGC,0,0,0,0,,,,,,,,, -cWW_tHS_CGU,0,0,0,0,,,,,,,,, -cWW_tHS_CUC,0,0,0,0,,,,,,,,, -cWW_tHS_CUU,0,0,0,0,,,,,,,,, -cWW_tHS_GCG,0,0,0,0,,,,,,,,, -cWW_tHS_GGA,0,0,0,0,,,,,,,,, -cWW_tHS_GGC,0,0,0,0,,,,,,,,, -cWW_tHS_GGG,0,0,0,0,,,,,,,,, -cWW_tHS_GGU,0,0,0,0,,,,,,,,, -cWW_tHS_GUC,0,0,0,0,,,,,,,,, -cWW_tHS_GUU,0,0,0,0,,,,,,,,, -cWW_tHS_UCG,0,0,0,0,,,,,,,,, -cWW_tHS_UGA,0,0,0,0,,,,,,,,, -cWW_tHS_UGC,0,0,0,0,,,,,,,,, -cWW_tHS_UGU,0,0,0,0,,,,,,,,, -cWW_tHS_UUC,0,0,0,0,,,,,,,,, -cWW_tHS_UUU,0,0,0,0,,,,,,,,, -cWW_tHW_AAG,0,0,0,0,,,,,,,,, -cWW_tHW_ACA,0,0,0,0,,,,,,,,, -cWW_tHW_ACG,0,0,0,0,,,,,,,,, -cWW_tHW_ACU,0,0,0,0,,,,,,,,, -cWW_tHW_AUA,0,0,0,0,,,,,,,,, -cWW_tHW_AUC,0,0,0,0,,,,,,,,, -cWW_tHW_CAG,0,0,0,0,,,,,,,,, -cWW_tHW_CCA,0,0,0,0,,,,,,,,, -cWW_tHW_CCG,0,0,0,0,,,,,,,,, -cWW_tHW_CCU,0,0,0,0,,,,,,,,, -cWW_tHW_CUA,0,0,0,0,,,,,,,,, -cWW_tHW_CUC,0,0,0,0,,,,,,,,, -cWW_tHW_GAG,0,0,0,0,,,,,,,,, -cWW_tHW_GCA,0,0,0,0,,,,,,,,, -cWW_tHW_GCG,0,0,0,0,,,,,,,,, -cWW_tHW_GCU,0,0,0,0,,,,,,,,, -cWW_tHW_GGA,0,0,0,0,,,,,,,,, -cWW_tHW_GGC,0,0,0,0,,,,,,,,, -cWW_tHW_GGG,0,0,0,0,,,,,,,,, -cWW_tHW_GGU,0,0,0,0,,,,,,,,, -cWW_tHW_GUA,0,0,0,0,,,,,,,,, -cWW_tHW_GUC,0,0,0,0,,,,,,,,, -cWW_tHW_UAG,0,0,0,0,,,,,,,,, -cWW_tHW_UCA,0,0,0,0,,,,,,,,, -cWW_tHW_UCG,0,0,0,0,,,,,,,,, -cWW_tHW_UCU,0,0,0,0,,,,,,,,, -cWW_tHW_UUA,0,0,0,0,,,,,,,,, -cWW_tHW_UUC,0,0,0,0,,,,,,,,, -cWW_tSH_AAG,0,0,0,0,,,,,,,,, -cWW_tSH_ACG,0,0,0,0,,,,,,,,, -cWW_tSH_ACU,0,0,0,0,,,,,,,,, -cWW_tSH_AGC,0,0,0,0,,,,,,,,, -cWW_tSH_AUG,0,0,0,0,,,,,,,,, -cWW_tSH_AUU,0,0,0,0,,,,,,,,, -cWW_tSH_CAG,0,0,0,0,,,,,,,,, -cWW_tSH_CCG,0,0,0,0,,,,,,,,, -cWW_tSH_CCU,0,0,0,0,,,,,,,,, -cWW_tSH_CGC,0,0,0,0,,,,,,,,, -cWW_tSH_CUG,0,0,0,0,,,,,,,,, -cWW_tSH_CUU,0,0,0,0,,,,,,,,, -cWW_tSH_GAG,0,0,0,0,,,,,,,,, -cWW_tSH_GCG,0,0,0,0,,,,,,,,, -cWW_tSH_GCU,0,0,0,0,,,,,,,,, -cWW_tSH_GGA,0,0,0,0,,,,,,,,, -cWW_tSH_GGC,0,0,0,0,,,,,,,,, -cWW_tSH_GGG,0,0,0,0,,,,,,,,, -cWW_tSH_GGU,0,0,0,0,,,,,,,,, -cWW_tSH_GUG,0,0,0,0,,,,,,,,, -cWW_tSH_GUU,0,0,0,0,,,,,,,,, -cWW_tSH_UAG,0,0,0,0,,,,,,,,, -cWW_tSH_UCG,0,0,0,0,,,,,,,,, -cWW_tSH_UCU,0,0,0,0,,,,,,,,, -cWW_tSH_UGC,0,0,0,0,,,,,,,,, -cWW_tSH_UUG,0,0,0,0,,,,,,,,, -cWW_tSH_UUU,0,0,0,0,,,,,,,,, -cWW_tSW_AAG,0,0,0,0,,,,,,,,, -cWW_tSW_AGG,0,0,0,0,,,,,,,,, -cWW_tSW_CAG,0,0,0,0,,,,,,,,, -cWW_tSW_CGG,0,0,0,0,,,,,,,,, -cWW_tSW_GAG,0,0,0,0,,,,,,,,, -cWW_tSW_GGA,0,0,0,0,,,,,,,,, -cWW_tSW_GGC,0,0,0,0,,,,,,,,, -cWW_tSW_GGG,0,0,0,0,,,,,,,,, -cWW_tSW_GGU,0,0,0,0,,,,,,,,, -cWW_tSW_UAG,0,0,0,0,,,,,,,,, -cWW_tSW_UGG,0,0,0,0,,,,,,,,, -cWW_tSS_AAC,0,0,0,0,,,,,,,,, -cWW_tSS_AAU,0,0,0,0,,,,,,,,, -cWW_tSS_ACC,0,0,0,0,,,,,,,,, -cWW_tSS_ACU,0,0,0,0,,,,,,,,, -cWW_tSS_AGC,0,0,0,0,,,,,,,,, -cWW_tSS_AGU,0,0,0,0,,,,,,,,, -cWW_tSS_AUC,0,0,0,0,,,,,,,,, -cWW_tSS_AUU,0,0,0,0,,,,,,,,, -cWW_tSS_CAC,0,0,0,0,,,,,,,,, -cWW_tSS_CAU,0,0,0,0,,,,,,,,, -cWW_tSS_CCC,0,0,0,0,,,,,,,,, -cWW_tSS_CCU,0,0,0,0,,,,,,,,, -cWW_tSS_CGC,0,0,0,0,,,,,,,,, -cWW_tSS_CGU,0,0,0,0,,,,,,,,, -cWW_tSS_CUC,0,0,0,0,,,,,,,,, -cWW_tSS_CUU,0,0,0,0,,,,,,,,, -cWW_tSS_GAC,0,0,0,0,,,,,,,,, -cWW_tSS_GAU,0,0,0,0,,,,,,,,, -cWW_tSS_GCC,0,0,0,0,,,,,,,,, -cWW_tSS_GCU,0,0,0,0,,,,,,,,, -cWW_tSS_GGA,0,0,0,0,,,,,,,,, -cWW_tSS_GGC,0,0,0,0,,,,,,,,, -cWW_tSS_GGG,0,0,0,0,,,,,,,,, -cWW_tSS_GGU,0,0,0,0,,,,,,,,, -cWW_tSS_GUC,0,0,0,0,,,,,,,,, -cWW_tSS_GUU,0,0,0,0,,,,,,,,, -cWW_tSS_UAC,0,0,0,0,,,,,,,,, -cWW_tSS_UAU,0,0,0,0,,,,,,,,, -cWW_tSS_UCC,0,0,0,0,,,,,,,,, -cWW_tSS_UCU,0,0,0,0,,,,,,,,, -cWW_tSS_UGC,0,0,0,0,,,,,,,,, -cWW_tSS_UGU,0,0,0,0,,,,,,,,, -cWW_tSS_UUC,0,0,0,0,,,,,,,,, -cWW_tSS_UUU,0,0,0,0,,,,,,,,, -tHH_cSH_ACG,0,0,0,0,,,,,,,,, -tHH_cSH_AUG,0,0,0,0,,,,,,,,, -tHH_cSH_CCA,0,0,0,0,,,,,,,,, -tHH_cSH_CCC,0,0,0,0,,,,,,,,, -tHH_cSH_CCG,0,0,0,0,,,,,,,,, -tHH_cSH_CCU,0,0,0,0,,,,,,,,, -tHH_cSH_CUG,0,0,0,0,,,,,,,,, -tHH_cSH_GCG,0,0,0,0,,,,,,,,, -tHH_cSH_GUA,0,0,0,0,,,,,,,,, -tHH_cSH_GUC,0,0,0,0,,,,,,,,, -tHH_cSH_GUG,0,0,0,0,,,,,,,,, -tHH_cSH_GUU,0,0,0,0,,,,,,,,, -tHH_cSH_UCG,0,0,0,0,,,,,,,,, -tHH_cSH_UGA,0,0,0,0,,,,,,,,, -tHH_cSH_UGC,0,0,0,0,,,,,,,,, -tHH_cSH_UGG,0,0,0,0,,,,,,,,, -tHH_cSH_UGU,0,0,0,0,,,,,,,,, -tHH_cSH_UUA,0,0,0,0,,,,,,,,, -tHH_cSH_UUC,0,0,0,0,,,,,,,,, -tHH_cSH_UUG,0,0,0,0,,,,,,,,, -tHH_cSH_UUU,0,0,0,0,,,,,,,,, -tHH_cSS_CCA,0,0,0,0,,,,,,,,, -tHH_cSS_CCC,0,0,0,0,,,,,,,,, -tHH_cSS_CCG,0,0,0,0,,,,,,,,, -tHH_cSS_CCU,0,0,0,0,,,,,,,,, -tHH_cSS_GUA,0,0,0,0,,,,,,,,, -tHH_cSS_GUC,0,0,0,0,,,,,,,,, -tHH_cSS_GUG,0,0,0,0,,,,,,,,, -tHH_cSS_GUU,0,0,0,0,,,,,,,,, -tHH_cSS_UGA,0,0,0,0,,,,,,,,, -tHH_cSS_UGC,0,0,0,0,,,,,,,,, -tHH_cSS_UGG,0,0,0,0,,,,,,,,, -tHH_cSS_UGU,0,0,0,0,,,,,,,,, -tHH_cSS_UUA,0,0,0,0,,,,,,,,, -tHH_cSS_UUC,0,0,0,0,,,,,,,,, -tHH_cSS_UUG,0,0,0,0,,,,,,,,, -tHH_cSS_UUU,0,0,0,0,,,,,,,,, -tHH_cSW_CCA,0,0,0,0,,,,,,,,, -tHH_cSW_CCC,0,0,0,0,,,,,,,,, -tHH_cSW_CCG,0,0,0,0,,,,,,,,, -tHH_cSW_CCU,0,0,0,0,,,,,,,,, -tHH_cSW_GUA,0,0,0,0,,,,,,,,, -tHH_cSW_GUC,0,0,0,0,,,,,,,,, -tHH_cSW_GUG,0,0,0,0,,,,,,,,, -tHH_cSW_GUU,0,0,0,0,,,,,,,,, -tHH_cSW_UGA,0,0,0,0,,,,,,,,, -tHH_cSW_UGC,0,0,0,0,,,,,,,,, -tHH_cSW_UGG,0,0,0,0,,,,,,,,, -tHH_cSW_UGU,0,0,0,0,,,,,,,,, -tHH_cSW_UUA,0,0,0,0,,,,,,,,, -tHH_cSW_UUC,0,0,0,0,,,,,,,,, -tHH_cSW_UUG,0,0,0,0,,,,,,,,, -tHH_cSW_UUU,0,0,0,0,,,,,,,,, -tHH_tSH_AAG,0,0,0,0,,,,,,,,, -tHH_tSH_ACG,0,0,0,0,,,,,,,,, -tHH_tSH_ACU,0,0,0,0,,,,,,,,, -tHH_tSH_AGC,0,0,0,0,,,,,,,,, -tHH_tSH_AUG,0,0,0,0,,,,,,,,, -tHH_tSH_AUU,0,0,0,0,,,,,,,,, -tHH_tSH_CAG,0,0,0,0,,,,,,,,, -tHH_tSH_CCA,0,0,0,0,,,,,,,,, -tHH_tSH_CCC,0,0,0,0,,,,,,,,, -tHH_tSH_CCG,0,0,0,0,,,,,,,,, -tHH_tSH_CCU,0,0,0,0,,,,,,,,, -tHH_tSH_CGC,0,0,0,0,,,,,,,,, -tHH_tSH_CUG,0,0,0,0,,,,,,,,, -tHH_tSH_CUU,0,0,0,0,,,,,,,,, -tHH_tSH_GAG,0,0,0,0,,,,,,,,, -tHH_tSH_GCG,0,0,0,0,,,,,,,,, -tHH_tSH_GCU,0,0,0,0,,,,,,,,, -tHH_tSH_GGC,0,0,0,0,,,,,,,,, -tHH_tSH_GUA,0,0,0,0,,,,,,,,, -tHH_tSH_GUC,0,0,0,0,,,,,,,,, -tHH_tSH_GUG,0,0,0,0,,,,,,,,, -tHH_tSH_GUU,0,0,0,0,,,,,,,,, -tHH_tSH_UAG,0,0,0,0,,,,,,,,, -tHH_tSH_UCG,0,0,0,0,,,,,,,,, -tHH_tSH_UCU,0,0,0,0,,,,,,,,, -tHH_tSH_UGA,0,0,0,0,,,,,,,,, -tHH_tSH_UGC,0,0,0,0,,,,,,,,, -tHH_tSH_UGG,0,0,0,0,,,,,,,,, -tHH_tSH_UGU,0,0,0,0,,,,,,,,, -tHH_tSH_UUA,0,0,0,0,,,,,,,,, -tHH_tSH_UUC,0,0,0,0,,,,,,,,, -tHH_tSH_UUG,0,0,0,0,,,,,,,,, -tHH_tSH_UUU,0,0,0,0,,,,,,,,, -tHH_tSS_ACA,0,0,0,0,,,,,,,,, -tHH_tSS_ACC,0,0,0,0,,,,,,,,, -tHH_tSS_ACG,0,0,0,0,,,,,,,,, -tHH_tSS_ACU,0,0,0,0,,,,,,,,, -tHH_tSS_AUA,0,0,0,0,,,,,,,,, -tHH_tSS_AUC,0,0,0,0,,,,,,,,, -tHH_tSS_AUG,0,0,0,0,,,,,,,,, -tHH_tSS_AUU,0,0,0,0,,,,,,,,, -tHH_tSS_CCA,0,0,0,0,,,,,,,,, -tHH_tSS_CCC,0,0,0,0,,,,,,,,, -tHH_tSS_CCG,0,0,0,0,,,,,,,,, -tHH_tSS_CCU,0,0,0,0,,,,,,,,, -tHH_tSS_CUA,0,0,0,0,,,,,,,,, -tHH_tSS_CUC,0,0,0,0,,,,,,,,, -tHH_tSS_CUG,0,0,0,0,,,,,,,,, -tHH_tSS_CUU,0,0,0,0,,,,,,,,, -tHH_tSS_GCC,0,0,0,0,,,,,,,,, -tHH_tSS_GCG,0,0,0,0,,,,,,,,, -tHH_tSS_GCU,0,0,0,0,,,,,,,,, -tHH_tSS_GUA,0,0,0,0,,,,,,,,, -tHH_tSS_GUC,0,0,0,0,,,,,,,,, -tHH_tSS_GUG,0,0,0,0,,,,,,,,, -tHH_tSS_GUU,0,0,0,0,,,,,,,,, -tHH_tSS_UCA,0,0,0,0,,,,,,,,, -tHH_tSS_UCC,0,0,0,0,,,,,,,,, -tHH_tSS_UCG,0,0,0,0,,,,,,,,, -tHH_tSS_UCU,0,0,0,0,,,,,,,,, -tHH_tSS_UGA,0,0,0,0,,,,,,,,, -tHH_tSS_UGC,0,0,0,0,,,,,,,,, -tHH_tSS_UGG,0,0,0,0,,,,,,,,, -tHH_tSS_UGU,0,0,0,0,,,,,,,,, -tHH_tSS_UUA,0,0,0,0,,,,,,,,, -tHH_tSS_UUC,0,0,0,0,,,,,,,,, -tHH_tSS_UUG,0,0,0,0,,,,,,,,, -tHH_tSS_UUU,0,0,0,0,,,,,,,,, -tHH_tSW_AAG,0,0,0,0,,,,,,,,, -tHH_tSW_AGG,0,0,0,0,,,,,,,,, -tHH_tSW_CAG,0,0,0,0,,,,,,,,, -tHH_tSW_CCA,0,0,0,0,,,,,,,,, -tHH_tSW_CCC,0,0,0,0,,,,,,,,, -tHH_tSW_CCG,0,0,0,0,,,,,,,,, -tHH_tSW_CCU,0,0,0,0,,,,,,,,, -tHH_tSW_CGG,0,0,0,0,,,,,,,,, -tHH_tSW_GAG,0,0,0,0,,,,,,,,, -tHH_tSW_GGG,0,0,0,0,,,,,,,,, -tHH_tSW_GUA,0,0,0,0,,,,,,,,, -tHH_tSW_GUC,0,0,0,0,,,,,,,,, -tHH_tSW_GUG,0,0,0,0,,,,,,,,, -tHH_tSW_GUU,0,0,0,0,,,,,,,,, -tHH_tSW_UAG,0,0,0,0,,,,,,,,, -tHH_tSW_UGA,0,0,0,0,,,,,,,,, -tHH_tSW_UGC,0,0,0,0,,,,,,,,, -tHH_tSW_UGG,0,0,0,0,,,,,,,,, -tHH_tSW_UGU,0,0,0,0,,,,,,,,, -tHH_tSW_UUA,0,0,0,0,,,,,,,,, -tHH_tSW_UUC,0,0,0,0,,,,,,,,, -tHH_tSW_UUG,0,0,0,0,,,,,,,,, -tHH_tSW_UUU,0,0,0,0,,,,,,,,, -tHW_cHH_AAA,0,0,0,0,,,,,,,,, -tHW_cHH_AAC,0,0,0,0,,,,,,,,, -tHW_cHH_AAU,0,0,0,0,,,,,,,,, -tHW_cHH_ACA,0,0,0,0,,,,,,,,, -tHW_cHH_ACC,0,0,0,0,,,,,,,,, -tHW_cHH_ACU,0,0,0,0,,,,,,,,, -tHW_cHH_AGA,0,0,0,0,,,,,,,,, -tHW_cHH_AGC,0,0,0,0,,,,,,,,, -tHW_cHH_AGG,0,0,0,0,,,,,,,,, -tHW_cHH_AGU,0,0,0,0,,,,,,,,, -tHW_cHH_AUA,0,0,0,0,,,,,,,,, -tHW_cHH_AUC,0,0,0,0,,,,,,,,, -tHW_cHH_AUG,0,0,0,0,,,,,,,,, -tHW_cHH_AUU,0,0,0,0,,,,,,,,, -tHW_cHH_CAA,0,0,0,0,,,,,,,,, -tHW_cHH_CAC,0,0,0,0,,,,,,,,, -tHW_cHH_CAG,0,0,0,0,,,,,,,,, -tHW_cHH_CAU,0,0,0,0,,,,,,,,, -tHW_cHH_CCA,0,0,0,0,,,,,,,,, -tHW_cHH_CCC,0,0,0,0,,,,,,,,, -tHW_cHH_CCU,0,0,0,0,,,,,,,,, -tHW_cHH_CGA,0,0,0,0,,,,,,,,, -tHW_cHH_CGC,0,0,0,0,,,,,,,,, -tHW_cHH_CGG,0,0,0,0,,,,,,,,, -tHW_cHH_CGU,0,0,0,0,,,,,,,,, -tHW_cHH_CUA,0,0,0,0,,,,,,,,, -tHW_cHH_CUC,0,0,0,0,,,,,,,,, -tHW_cHH_CUG,0,0,0,0,,,,,,,,, -tHW_cHH_CUU,0,0,0,0,,,,,,,,, -tHW_cHH_GAA,0,0,0,0,,,,,,,,, -tHW_cHH_GAC,0,0,0,0,,,,,,,,, -tHW_cHH_GAU,0,0,0,0,,,,,,,,, -tHW_cHH_GCA,0,0,0,0,,,,,,,,, -tHW_cHH_GCC,0,0,0,0,,,,,,,,, -tHW_cHH_GCU,0,0,0,0,,,,,,,,, -tHW_cHH_GGU,0,0,0,0,,,,,,,,, -tHW_cHH_GUA,0,0,0,0,,,,,,,,, -tHW_cHH_GUC,0,0,0,0,,,,,,,,, -tHW_cHH_GUG,0,0,0,0,,,,,,,,, -tHW_cHH_GUU,0,0,0,0,,,,,,,,, -tHW_cHH_UAA,0,0,0,0,,,,,,,,, -tHW_cHH_UAC,0,0,0,0,,,,,,,,, -tHW_cHH_UAG,0,0,0,0,,,,,,,,, -tHW_cHH_UAU,0,0,0,0,,,,,,,,, -tHW_cHH_UCA,0,0,0,0,,,,,,,,, -tHW_cHH_UCC,0,0,0,0,,,,,,,,, -tHW_cHH_UCG,0,0,0,0,,,,,,,,, -tHW_cHH_UCU,0,0,0,0,,,,,,,,, -tHW_cHH_UGU,0,0,0,0,,,,,,,,, -tHW_cHH_UUA,0,0,0,0,,,,,,,,, -tHW_cHH_UUC,0,0,0,0,,,,,,,,, -tHW_cHH_UUG,0,0,0,0,,,,,,,,, -tHW_cHH_UUU,0,0,0,0,,,,,,,,, -tHW_cHS_AGA,0,0,0,0,,,,,,,,, -tHW_cHS_AGC,0,0,0,0,,,,,,,,, -tHW_cHS_AGG,0,0,0,0,,,,,,,,, -tHW_cHS_AGU,0,0,0,0,,,,,,,,, -tHW_cHS_CAA,0,0,0,0,,,,,,,,, -tHW_cHS_CAC,0,0,0,0,,,,,,,,, -tHW_cHS_CAG,0,0,0,0,,,,,,,,, -tHW_cHS_CAU,0,0,0,0,,,,,,,,, -tHW_cHS_CGA,0,0,0,0,,,,,,,,, -tHW_cHS_CGC,0,0,0,0,,,,,,,,, -tHW_cHS_CGG,0,0,0,0,,,,,,,,, -tHW_cHS_CGU,0,0,0,0,,,,,,,,, -tHW_cHS_CUA,0,0,0,0,,,,,,,,, -tHW_cHS_CUC,0,0,0,0,,,,,,,,, -tHW_cHS_CUG,0,0,0,0,,,,,,,,, -tHW_cHS_CUU,0,0,0,0,,,,,,,,, -tHW_cHS_GGC,0,0,0,0,,,,,,,,, -tHW_cHS_GGU,0,0,0,0,,,,,,,,, -tHW_cHS_UAA,0,0,0,0,,,,,,,,, -tHW_cHS_UAC,0,0,0,0,,,,,,,,, -tHW_cHS_UAG,0,0,0,0,,,,,,,,, -tHW_cHS_UAU,0,0,0,0,,,,,,,,, -tHW_cHS_UCA,0,0,0,0,,,,,,,,, -tHW_cHS_UCC,0,0,0,0,,,,,,,,, -tHW_cHS_UCG,0,0,0,0,,,,,,,,, -tHW_cHS_UCU,0,0,0,0,,,,,,,,, -tHW_cHS_UGC,0,0,0,0,,,,,,,,, -tHW_cHS_UGU,0,0,0,0,,,,,,,,, -tHW_cHW_AAA,0,0,0,0,,,,,,,,, -tHW_cHW_AAC,0,0,0,0,,,,,,,,, -tHW_cHW_ACA,0,0,0,0,,,,,,,,, -tHW_cHW_ACG,0,0,0,0,,,,,,,,, -tHW_cHW_ACU,0,0,0,0,,,,,,,,, -tHW_cHW_AGA,0,0,0,0,,,,,,,,, -tHW_cHW_AGC,0,0,0,0,,,,,,,,, -tHW_cHW_AGG,0,0,0,0,,,,,,,,, -tHW_cHW_AGU,0,0,0,0,,,,,,,,, -tHW_cHW_AUG,0,0,0,0,,,,,,,,, -tHW_cHW_CAA,0,0,0,0,,,,,,,,, -tHW_cHW_CAC,0,0,0,0,,,,,,,,, -tHW_cHW_CAG,0,0,0,0,,,,,,,,, -tHW_cHW_CAU,0,0,0,0,,,,,,,,, -tHW_cHW_CCA,0,0,0,0,,,,,,,,, -tHW_cHW_CCG,0,0,0,0,,,,,,,,, -tHW_cHW_CCU,0,0,0,0,,,,,,,,, -tHW_cHW_CGA,0,0,0,0,,,,,,,,, -tHW_cHW_CGC,0,0,0,0,,,,,,,,, -tHW_cHW_CGG,0,0,0,0,,,,,,,,, -tHW_cHW_CGU,0,0,0,0,,,,,,,,, -tHW_cHW_CUA,0,0,0,0,,,,,,,,, -tHW_cHW_CUC,0,0,0,0,,,,,,,,, -tHW_cHW_CUG,0,0,0,0,,,,,,,,, -tHW_cHW_CUU,0,0,0,0,,,,,,,,, -tHW_cHW_GAA,0,0,0,0,,,,,,,,, -tHW_cHW_GAC,0,0,0,0,,,,,,,,, -tHW_cHW_GCA,0,0,0,0,,,,,,,,, -tHW_cHW_GCG,0,0,0,0,,,,,,,,, -tHW_cHW_GCU,0,0,0,0,,,,,,,,, -tHW_cHW_GUG,0,0,0,0,,,,,,,,, -tHW_cHW_UAA,0,0,0,0,,,,,,,,, -tHW_cHW_UAC,0,0,0,0,,,,,,,,, -tHW_cHW_UAG,0,0,0,0,,,,,,,,, -tHW_cHW_UAU,0,0,0,0,,,,,,,,, -tHW_cHW_UCA,0,0,0,0,,,,,,,,, -tHW_cHW_UCC,0,0,0,0,,,,,,,,, -tHW_cHW_UCG,0,0,0,0,,,,,,,,, -tHW_cHW_UCU,0,0,0,0,,,,,,,,, -tHW_cHW_UUG,0,0,0,0,,,,,,,,, -tHW_cSH_ACG,0,0,0,0,,,,,,,,, -tHW_cSH_AGA,0,0,0,0,,,,,,,,, -tHW_cSH_AGC,0,0,0,0,,,,,,,,, -tHW_cSH_AGG,0,0,0,0,,,,,,,,, -tHW_cSH_AGU,0,0,0,0,,,,,,,,, -tHW_cSH_AUG,0,0,0,0,,,,,,,,, -tHW_cSH_CAA,0,0,0,0,,,,,,,,, -tHW_cSH_CAC,0,0,0,0,,,,,,,,, -tHW_cSH_CAG,0,0,0,0,,,,,,,,, -tHW_cSH_CAU,0,0,0,0,,,,,,,,, -tHW_cSH_CCG,0,0,0,0,,,,,,,,, -tHW_cSH_CGA,0,0,0,0,,,,,,,,, -tHW_cSH_CGC,0,0,0,0,,,,,,,,, -tHW_cSH_CGG,0,0,0,0,,,,,,,,, -tHW_cSH_CGU,0,0,0,0,,,,,,,,, -tHW_cSH_CUA,0,0,0,0,,,,,,,,, -tHW_cSH_CUC,0,0,0,0,,,,,,,,, -tHW_cSH_CUG,0,0,0,0,,,,,,,,, -tHW_cSH_CUU,0,0,0,0,,,,,,,,, -tHW_cSH_GCG,0,0,0,0,,,,,,,,, -tHW_cSH_GUG,0,0,0,0,,,,,,,,, -tHW_cSH_UAA,0,0,0,0,,,,,,,,, -tHW_cSH_UAC,0,0,0,0,,,,,,,,, -tHW_cSH_UAG,0,0,0,0,,,,,,,,, -tHW_cSH_UAU,0,0,0,0,,,,,,,,, -tHW_cSH_UCA,0,0,0,0,,,,,,,,, -tHW_cSH_UCC,0,0,0,0,,,,,,,,, -tHW_cSH_UCG,0,0,0,0,,,,,,,,, -tHW_cSH_UCU,0,0,0,0,,,,,,,,, -tHW_cSH_UUG,0,0,0,0,,,,,,,,, -tHW_cSS_AGA,0,0,0,0,,,,,,,,, -tHW_cSS_AGC,0,0,0,0,,,,,,,,, -tHW_cSS_AGG,0,0,0,0,,,,,,,,, -tHW_cSS_AGU,0,0,0,0,,,,,,,,, -tHW_cSS_CAA,0,0,0,0,,,,,,,,, -tHW_cSS_CAC,0,0,0,0,,,,,,,,, -tHW_cSS_CAG,0,0,0,0,,,,,,,,, -tHW_cSS_CAU,0,0,0,0,,,,,,,,, -tHW_cSS_CGA,0,0,0,0,,,,,,,,, -tHW_cSS_CGC,0,0,0,0,,,,,,,,, -tHW_cSS_CGG,0,0,0,0,,,,,,,,, -tHW_cSS_CGU,0,0,0,0,,,,,,,,, -tHW_cSS_CUA,0,0,0,0,,,,,,,,, -tHW_cSS_CUC,0,0,0,0,,,,,,,,, -tHW_cSS_CUG,0,0,0,0,,,,,,,,, -tHW_cSS_CUU,0,0,0,0,,,,,,,,, -tHW_cSS_UAA,0,0,0,0,,,,,,,,, -tHW_cSS_UAC,0,0,0,0,,,,,,,,, -tHW_cSS_UAG,0,0,0,0,,,,,,,,, -tHW_cSS_UAU,0,0,0,0,,,,,,,,, -tHW_cSS_UCA,0,0,0,0,,,,,,,,, -tHW_cSS_UCC,0,0,0,0,,,,,,,,, -tHW_cSS_UCG,0,0,0,0,,,,,,,,, -tHW_cSS_UCU,0,0,0,0,,,,,,,,, -tHW_cSW_AGA,0,0,0,0,,,,,,,,, -tHW_cSW_AGC,0,0,0,0,,,,,,,,, -tHW_cSW_AGG,0,0,0,0,,,,,,,,, -tHW_cSW_AGU,0,0,0,0,,,,,,,,, -tHW_cSW_CAA,0,0,0,0,,,,,,,,, -tHW_cSW_CAC,0,0,0,0,,,,,,,,, -tHW_cSW_CAG,0,0,0,0,,,,,,,,, -tHW_cSW_CAU,0,0,0,0,,,,,,,,, -tHW_cSW_CGA,0,0,0,0,,,,,,,,, -tHW_cSW_CGC,0,0,0,0,,,,,,,,, -tHW_cSW_CGG,0,0,0,0,,,,,,,,, -tHW_cSW_CGU,0,0,0,0,,,,,,,,, -tHW_cSW_CUA,0,0,0,0,,,,,,,,, -tHW_cSW_CUC,0,0,0,0,,,,,,,,, -tHW_cSW_CUG,0,0,0,0,,,,,,,,, -tHW_cSW_CUU,0,0,0,0,,,,,,,,, -tHW_cSW_UAA,0,0,0,0,,,,,,,,, -tHW_cSW_UAC,0,0,0,0,,,,,,,,, -tHW_cSW_UAG,0,0,0,0,,,,,,,,, -tHW_cSW_UAU,0,0,0,0,,,,,,,,, -tHW_cSW_UCA,0,0,0,0,,,,,,,,, -tHW_cSW_UCC,0,0,0,0,,,,,,,,, -tHW_cSW_UCG,0,0,0,0,,,,,,,,, -tHW_cSW_UCU,0,0,0,0,,,,,,,,, -tHW_tHH_ACC,0,0,0,0,,,,,,,,, -tHW_tHH_AGA,0,0,0,0,,,,,,,,, -tHW_tHH_AGC,0,0,0,0,,,,,,,,, -tHW_tHH_AGG,0,0,0,0,,,,,,,,, -tHW_tHH_AGU,0,0,0,0,,,,,,,,, -tHW_tHH_AUG,0,0,0,0,,,,,,,,, -tHW_tHH_AUU,0,0,0,0,,,,,,,,, -tHW_tHH_CAA,0,0,0,0,,,,,,,,, -tHW_tHH_CAC,0,0,0,0,,,,,,,,, -tHW_tHH_CAG,0,0,0,0,,,,,,,,, -tHW_tHH_CAU,0,0,0,0,,,,,,,,, -tHW_tHH_CCC,0,0,0,0,,,,,,,,, -tHW_tHH_CGA,0,0,0,0,,,,,,,,, -tHW_tHH_CGC,0,0,0,0,,,,,,,,, -tHW_tHH_CGG,0,0,0,0,,,,,,,,, -tHW_tHH_CGU,0,0,0,0,,,,,,,,, -tHW_tHH_CUA,0,0,0,0,,,,,,,,, -tHW_tHH_CUC,0,0,0,0,,,,,,,,, -tHW_tHH_CUG,0,0,0,0,,,,,,,,, -tHW_tHH_CUU,0,0,0,0,,,,,,,,, -tHW_tHH_GCC,0,0,0,0,,,,,,,,, -tHW_tHH_GGU,0,0,0,0,,,,,,,,, -tHW_tHH_GUG,0,0,0,0,,,,,,,,, -tHW_tHH_GUU,0,0,0,0,,,,,,,,, -tHW_tHH_UAA,0,0,0,0,,,,,,,,, -tHW_tHH_UAC,0,0,0,0,,,,,,,,, -tHW_tHH_UAG,0,0,0,0,,,,,,,,, -tHW_tHH_UAU,0,0,0,0,,,,,,,,, -tHW_tHH_UCA,0,0,0,0,,,,,,,,, -tHW_tHH_UCC,0,0,0,0,,,,,,,,, -tHW_tHH_UCG,0,0,0,0,,,,,,,,, -tHW_tHH_UCU,0,0,0,0,,,,,,,,, -tHW_tHH_UGU,0,0,0,0,,,,,,,,, -tHW_tHH_UUG,0,0,0,0,,,,,,,,, -tHW_tHH_UUU,0,0,0,0,,,,,,,,, -tHW_tHS_ACG,0,0,0,0,,,,,,,,, -tHW_tHS_AGA,0,0,0,0,,,,,,,,, -tHW_tHS_AGC,0,0,0,0,,,,,,,,, -tHW_tHS_AGG,0,0,0,0,,,,,,,,, -tHW_tHS_AGU,0,0,0,0,,,,,,,,, -tHW_tHS_AUC,0,0,0,0,,,,,,,,, -tHW_tHS_AUU,0,0,0,0,,,,,,,,, -tHW_tHS_CAA,0,0,0,0,,,,,,,,, -tHW_tHS_CAC,0,0,0,0,,,,,,,,, -tHW_tHS_CAG,0,0,0,0,,,,,,,,, -tHW_tHS_CAU,0,0,0,0,,,,,,,,, -tHW_tHS_CCG,0,0,0,0,,,,,,,,, -tHW_tHS_CGA,0,0,0,0,,,,,,,,, -tHW_tHS_CGC,0,0,0,0,,,,,,,,, -tHW_tHS_CGG,0,0,0,0,,,,,,,,, -tHW_tHS_CGU,0,0,0,0,,,,,,,,, -tHW_tHS_CUA,0,0,0,0,,,,,,,,, -tHW_tHS_CUC,0,0,0,0,,,,,,,,, -tHW_tHS_CUG,0,0,0,0,,,,,,,,, -tHW_tHS_CUU,0,0,0,0,,,,,,,,, -tHW_tHS_GCG,0,0,0,0,,,,,,,,, -tHW_tHS_GGA,0,0,0,0,,,,,,,,, -tHW_tHS_GGC,0,0,0,0,,,,,,,,, -tHW_tHS_GGU,0,0,0,0,,,,,,,,, -tHW_tHS_GUC,0,0,0,0,,,,,,,,, -tHW_tHS_GUU,0,0,0,0,,,,,,,,, -tHW_tHS_UAA,0,0,0,0,,,,,,,,, -tHW_tHS_UAC,0,0,0,0,,,,,,,,, -tHW_tHS_UAG,0,0,0,0,,,,,,,,, -tHW_tHS_UAU,0,0,0,0,,,,,,,,, -tHW_tHS_UCA,0,0,0,0,,,,,,,,, -tHW_tHS_UCC,0,0,0,0,,,,,,,,, -tHW_tHS_UCG,0,0,0,0,,,,,,,,, -tHW_tHS_UCU,0,0,0,0,,,,,,,,, -tHW_tHS_UGA,0,0,0,0,,,,,,,,, -tHW_tHS_UGC,0,0,0,0,,,,,,,,, -tHW_tHS_UGU,0,0,0,0,,,,,,,,, -tHW_tHS_UUC,0,0,0,0,,,,,,,,, -tHW_tHS_UUU,0,0,0,0,,,,,,,,, -tHW_tHW_AAG,0,0,0,0,,,,,,,,, -tHW_tHW_ACA,0,0,0,0,,,,,,,,, -tHW_tHW_ACG,0,0,0,0,,,,,,,,, -tHW_tHW_ACU,0,0,0,0,,,,,,,,, -tHW_tHW_AGA,0,0,0,0,,,,,,,,, -tHW_tHW_AGC,0,0,0,0,,,,,,,,, -tHW_tHW_AGG,0,0,0,0,,,,,,,,, -tHW_tHW_AGU,0,0,0,0,,,,,,,,, -tHW_tHW_AUA,0,0,0,0,,,,,,,,, -tHW_tHW_AUC,0,0,0,0,,,,,,,,, -tHW_tHW_CAA,0,0,0,0,,,,,,,,, -tHW_tHW_CAC,0,0,0,0,,,,,,,,, -tHW_tHW_CAG,0,0,0,0,,,,,,,,, -tHW_tHW_CAU,0,0,0,0,,,,,,,,, -tHW_tHW_CCA,0,0,0,0,,,,,,,,, -tHW_tHW_CCG,0,0,0,0,,,,,,,,, -tHW_tHW_CCU,0,0,0,0,,,,,,,,, -tHW_tHW_CGA,0,0,0,0,,,,,,,,, -tHW_tHW_CGC,0,0,0,0,,,,,,,,, -tHW_tHW_CGG,0,0,0,0,,,,,,,,, -tHW_tHW_CGU,0,0,0,0,,,,,,,,, -tHW_tHW_CUA,0,0,0,0,,,,,,,,, -tHW_tHW_CUC,0,0,0,0,,,,,,,,, -tHW_tHW_CUG,0,0,0,0,,,,,,,,, -tHW_tHW_CUU,0,0,0,0,,,,,,,,, -tHW_tHW_GAG,0,0,0,0,,,,,,,,, -tHW_tHW_GCA,0,0,0,0,,,,,,,,, -tHW_tHW_GCG,0,0,0,0,,,,,,,,, -tHW_tHW_GCU,0,0,0,0,,,,,,,,, -tHW_tHW_GUA,0,0,0,0,,,,,,,,, -tHW_tHW_GUC,0,0,0,0,,,,,,,,, -tHW_tHW_UAA,0,0,0,0,,,,,,,,, -tHW_tHW_UAC,0,0,0,0,,,,,,,,, -tHW_tHW_UAG,0,0,0,0,,,,,,,,, -tHW_tHW_UAU,0,0,0,0,,,,,,,,, -tHW_tHW_UCA,0,0,0,0,,,,,,,,, -tHW_tHW_UCC,0,0,0,0,,,,,,,,, -tHW_tHW_UCG,0,0,0,0,,,,,,,,, -tHW_tHW_UCU,0,0,0,0,,,,,,,,, -tHW_tHW_UUA,0,0,0,0,,,,,,,,, -tHW_tHW_UUC,0,0,0,0,,,,,,,,, -tHW_tSH_AAG,0,0,0,0,,,,,,,,, -tHW_tSH_ACG,0,0,0,0,,,,,,,,, -tHW_tSH_ACU,0,0,0,0,,,,,,,,, -tHW_tSH_AGA,0,0,0,0,,,,,,,,, -tHW_tSH_AGC,0,0,0,0,,,,,,,,, -tHW_tSH_AGG,0,0,0,0,,,,,,,,, -tHW_tSH_AGU,0,0,0,0,,,,,,,,, -tHW_tSH_AUG,0,0,0,0,,,,,,,,, -tHW_tSH_AUU,0,0,0,0,,,,,,,,, -tHW_tSH_CAA,0,0,0,0,,,,,,,,, -tHW_tSH_CAC,0,0,0,0,,,,,,,,, -tHW_tSH_CAG,0,0,0,0,,,,,,,,, -tHW_tSH_CAU,0,0,0,0,,,,,,,,, -tHW_tSH_CCG,0,0,0,0,,,,,,,,, -tHW_tSH_CCU,0,0,0,0,,,,,,,,, -tHW_tSH_CGA,0,0,0,0,,,,,,,,, -tHW_tSH_CGC,0,0,0,0,,,,,,,,, -tHW_tSH_CGG,0,0,0,0,,,,,,,,, -tHW_tSH_CGU,0,0,0,0,,,,,,,,, -tHW_tSH_CUA,0,0,0,0,,,,,,,,, -tHW_tSH_CUC,0,0,0,0,,,,,,,,, -tHW_tSH_CUG,0,0,0,0,,,,,,,,, -tHW_tSH_CUU,0,0,0,0,,,,,,,,, -tHW_tSH_GAG,0,0,0,0,,,,,,,,, -tHW_tSH_GCG,0,0,0,0,,,,,,,,, -tHW_tSH_GCU,0,0,0,0,,,,,,,,, -tHW_tSH_GGC,0,0,0,0,,,,,,,,, -tHW_tSH_GUG,0,0,0,0,,,,,,,,, -tHW_tSH_GUU,0,0,0,0,,,,,,,,, -tHW_tSH_UAA,0,0,0,0,,,,,,,,, -tHW_tSH_UAC,0,0,0,0,,,,,,,,, -tHW_tSH_UAG,0,0,0,0,,,,,,,,, -tHW_tSH_UAU,0,0,0,0,,,,,,,,, -tHW_tSH_UCA,0,0,0,0,,,,,,,,, -tHW_tSH_UCC,0,0,0,0,,,,,,,,, -tHW_tSH_UCG,0,0,0,0,,,,,,,,, -tHW_tSH_UCU,0,0,0,0,,,,,,,,, -tHW_tSH_UGC,0,0,0,0,,,,,,,,, -tHW_tSH_UUG,0,0,0,0,,,,,,,,, -tHW_tSH_UUU,0,0,0,0,,,,,,,,, -tHW_tSW_AAG,0,0,0,0,,,,,,,,, -tHW_tSW_AGA,0,0,0,0,,,,,,,,, -tHW_tSW_AGC,0,0,0,0,,,,,,,,, -tHW_tSW_AGG,0,0,0,0,,,,,,,,, -tHW_tSW_AGU,0,0,0,0,,,,,,,,, -tHW_tSW_CAA,0,0,0,0,,,,,,,,, -tHW_tSW_CAC,0,0,0,0,,,,,,,,, -tHW_tSW_CAG,0,0,0,0,,,,,,,,, -tHW_tSW_CAU,0,0,0,0,,,,,,,,, -tHW_tSW_CGA,0,0,0,0,,,,,,,,, -tHW_tSW_CGC,0,0,0,0,,,,,,,,, -tHW_tSW_CGG,0,0,0,0,,,,,,,,, -tHW_tSW_CGU,0,0,0,0,,,,,,,,, -tHW_tSW_CUA,0,0,0,0,,,,,,,,, -tHW_tSW_CUC,0,0,0,0,,,,,,,,, -tHW_tSW_CUG,0,0,0,0,,,,,,,,, -tHW_tSW_CUU,0,0,0,0,,,,,,,,, -tHW_tSW_GAG,0,0,0,0,,,,,,,,, -tHW_tSW_GGG,0,0,0,0,,,,,,,,, -tHW_tSW_UAA,0,0,0,0,,,,,,,,, -tHW_tSW_UAC,0,0,0,0,,,,,,,,, -tHW_tSW_UAG,0,0,0,0,,,,,,,,, -tHW_tSW_UAU,0,0,0,0,,,,,,,,, -tHW_tSW_UCA,0,0,0,0,,,,,,,,, -tHW_tSW_UCC,0,0,0,0,,,,,,,,, -tHW_tSW_UCG,0,0,0,0,,,,,,,,, -tHW_tSW_UCU,0,0,0,0,,,,,,,,, -tHW_tSW_UGG,0,0,0,0,,,,,,,,, -tHW_tSS_AAC,0,0,0,0,,,,,,,,, -tHW_tSS_AAU,0,0,0,0,,,,,,,,, -tHW_tSS_ACC,0,0,0,0,,,,,,,,, -tHW_tSS_ACU,0,0,0,0,,,,,,,,, -tHW_tSS_AGA,0,0,0,0,,,,,,,,, -tHW_tSS_AGC,0,0,0,0,,,,,,,,, -tHW_tSS_AGG,0,0,0,0,,,,,,,,, -tHW_tSS_AGU,0,0,0,0,,,,,,,,, -tHW_tSS_AUC,0,0,0,0,,,,,,,,, -tHW_tSS_AUU,0,0,0,0,,,,,,,,, -tHW_tSS_CAA,0,0,0,0,,,,,,,,, -tHW_tSS_CAC,0,0,0,0,,,,,,,,, -tHW_tSS_CAG,0,0,0,0,,,,,,,,, -tHW_tSS_CAU,0,0,0,0,,,,,,,,, -tHW_tSS_CCC,0,0,0,0,,,,,,,,, -tHW_tSS_CCU,0,0,0,0,,,,,,,,, -tHW_tSS_CGA,0,0,0,0,,,,,,,,, -tHW_tSS_CGC,0,0,0,0,,,,,,,,, -tHW_tSS_CGG,0,0,0,0,,,,,,,,, -tHW_tSS_CGU,0,0,0,0,,,,,,,,, -tHW_tSS_CUA,0,0,0,0,,,,,,,,, -tHW_tSS_CUC,0,0,0,0,,,,,,,,, -tHW_tSS_CUG,0,0,0,0,,,,,,,,, -tHW_tSS_CUU,0,0,0,0,,,,,,,,, -tHW_tSS_GAC,0,0,0,0,,,,,,,,, -tHW_tSS_GAU,0,0,0,0,,,,,,,,, -tHW_tSS_GCC,0,0,0,0,,,,,,,,, -tHW_tSS_GCU,0,0,0,0,,,,,,,,, -tHW_tSS_GGC,0,0,0,0,,,,,,,,, -tHW_tSS_GGU,0,0,0,0,,,,,,,,, -tHW_tSS_GUC,0,0,0,0,,,,,,,,, -tHW_tSS_GUU,0,0,0,0,,,,,,,,, -tHW_tSS_UAA,0,0,0,0,,,,,,,,, -tHW_tSS_UAC,0,0,0,0,,,,,,,,, -tHW_tSS_UAG,0,0,0,0,,,,,,,,, -tHW_tSS_UAU,0,0,0,0,,,,,,,,, -tHW_tSS_UCA,0,0,0,0,,,,,,,,, -tHW_tSS_UCC,0,0,0,0,,,,,,,,, -tHW_tSS_UCG,0,0,0,0,,,,,,,,, -tHW_tSS_UCU,0,0,0,0,,,,,,,,, -tHW_tSS_UGC,0,0,0,0,,,,,,,,, -tHW_tSS_UGU,0,0,0,0,,,,,,,,, -tHW_tSS_UUC,0,0,0,0,,,,,,,,, -tHW_tSS_UUU,0,0,0,0,,,,,,,,, -tSH_cSH_ACG,0,0,0,0,,,,,,,,, -tSH_cSH_AGA,0,0,0,0,,,,,,,,, -tSH_cSH_AGC,0,0,0,0,,,,,,,,, -tSH_cSH_AGG,0,0,0,0,,,,,,,,, -tSH_cSH_AGU,0,0,0,0,,,,,,,,, -tSH_cSH_AUG,0,0,0,0,,,,,,,,, -tSH_cSH_CCG,0,0,0,0,,,,,,,,, -tSH_cSH_CGA,0,0,0,0,,,,,,,,, -tSH_cSH_CGC,0,0,0,0,,,,,,,,, -tSH_cSH_CGG,0,0,0,0,,,,,,,,, -tSH_cSH_CGU,0,0,0,0,,,,,,,,, -tSH_cSH_CUA,0,0,0,0,,,,,,,,, -tSH_cSH_CUC,0,0,0,0,,,,,,,,, -tSH_cSH_CUG,0,0,0,0,,,,,,,,, -tSH_cSH_CUU,0,0,0,0,,,,,,,,, -tSH_cSH_GCA,0,0,0,0,,,,,,,,, -tSH_cSH_GCC,0,0,0,0,,,,,,,,, -tSH_cSH_GCG,0,0,0,0,,,,,,,,, -tSH_cSH_GCU,0,0,0,0,,,,,,,,, -tSH_cSH_GUG,0,0,0,0,,,,,,,,, -tSH_cSH_UCG,0,0,0,0,,,,,,,,, -tSH_cSH_UGA,0,0,0,0,,,,,,,,, -tSH_cSH_UGC,0,0,0,0,,,,,,,,, -tSH_cSH_UGG,0,0,0,0,,,,,,,,, -tSH_cSH_UGU,0,0,0,0,,,,,,,,, -tSH_cSH_UUA,0,0,0,0,,,,,,,,, -tSH_cSH_UUC,0,0,0,0,,,,,,,,, -tSH_cSH_UUG,0,0,0,0,,,,,,,,, -tSH_cSH_UUU,0,0,0,0,,,,,,,,, -tSH_cSS_AGA,0,0,0,0,,,,,,,,, -tSH_cSS_AGC,0,0,0,0,,,,,,,,, -tSH_cSS_AGG,0,0,0,0,,,,,,,,, -tSH_cSS_AGU,0,0,0,0,,,,,,,,, -tSH_cSS_CGA,0,0,0,0,,,,,,,,, -tSH_cSS_CGC,0,0,0,0,,,,,,,,, -tSH_cSS_CGG,0,0,0,0,,,,,,,,, -tSH_cSS_CGU,0,0,0,0,,,,,,,,, -tSH_cSS_CUA,0,0,0,0,,,,,,,,, -tSH_cSS_CUC,0,0,0,0,,,,,,,,, -tSH_cSS_CUG,0,0,0,0,,,,,,,,, -tSH_cSS_CUU,0,0,0,0,,,,,,,,, -tSH_cSS_GCA,0,0,0,0,,,,,,,,, -tSH_cSS_GCC,0,0,0,0,,,,,,,,, -tSH_cSS_GCG,0,0,0,0,,,,,,,,, -tSH_cSS_GCU,0,0,0,0,,,,,,,,, -tSH_cSS_UGA,0,0,0,0,,,,,,,,, -tSH_cSS_UGC,0,0,0,0,,,,,,,,, -tSH_cSS_UGG,0,0,0,0,,,,,,,,, -tSH_cSS_UGU,0,0,0,0,,,,,,,,, -tSH_cSS_UUA,0,0,0,0,,,,,,,,, -tSH_cSS_UUC,0,0,0,0,,,,,,,,, -tSH_cSS_UUG,0,0,0,0,,,,,,,,, -tSH_cSS_UUU,0,0,0,0,,,,,,,,, -tSH_cSW_AGA,0,0,0,0,,,,,,,,, -tSH_cSW_AGC,0,0,0,0,,,,,,,,, -tSH_cSW_AGG,0,0,0,0,,,,,,,,, -tSH_cSW_AGU,0,0,0,0,,,,,,,,, -tSH_cSW_CGA,0,0,0,0,,,,,,,,, -tSH_cSW_CGC,0,0,0,0,,,,,,,,, -tSH_cSW_CGG,0,0,0,0,,,,,,,,, -tSH_cSW_CGU,0,0,0,0,,,,,,,,, -tSH_cSW_CUA,0,0,0,0,,,,,,,,, -tSH_cSW_CUC,0,0,0,0,,,,,,,,, -tSH_cSW_CUG,0,0,0,0,,,,,,,,, -tSH_cSW_CUU,0,0,0,0,,,,,,,,, -tSH_cSW_GCA,0,0,0,0,,,,,,,,, -tSH_cSW_GCC,0,0,0,0,,,,,,,,, -tSH_cSW_GCG,0,0,0,0,,,,,,,,, -tSH_cSW_GCU,0,0,0,0,,,,,,,,, -tSH_cSW_UGA,0,0,0,0,,,,,,,,, -tSH_cSW_UGC,0,0,0,0,,,,,,,,, -tSH_cSW_UGG,0,0,0,0,,,,,,,,, -tSH_cSW_UGU,0,0,0,0,,,,,,,,, -tSH_cSW_UUA,0,0,0,0,,,,,,,,, -tSH_cSW_UUC,0,0,0,0,,,,,,,,, -tSH_cSW_UUG,0,0,0,0,,,,,,,,, -tSH_cSW_UUU,0,0,0,0,,,,,,,,, -tSH_tSH_AAG,0,0,0,0,,,,,,,,, -tSH_tSH_ACG,0,0,0,0,,,,,,,,, -tSH_tSH_ACU,0,0,0,0,,,,,,,,, -tSH_tSH_AGA,0,0,0,0,,,,,,,,, -tSH_tSH_AGC,0,0,0,0,,,,,,,,, -tSH_tSH_AGG,0,0,0,0,,,,,,,,, -tSH_tSH_AGU,0,0,0,0,,,,,,,,, -tSH_tSH_AUG,0,0,0,0,,,,,,,,, -tSH_tSH_AUU,0,0,0,0,,,,,,,,, -tSH_tSH_CAG,0,0,0,0,,,,,,,,, -tSH_tSH_CCG,0,0,0,0,,,,,,,,, -tSH_tSH_CCU,0,0,0,0,,,,,,,,, -tSH_tSH_CGA,0,0,0,0,,,,,,,,, -tSH_tSH_CGC,0,0,0,0,,,,,,,,, -tSH_tSH_CGG,0,0,0,0,,,,,,,,, -tSH_tSH_CGU,0,0,0,0,,,,,,,,, -tSH_tSH_CUA,0,0,0,0,,,,,,,,, -tSH_tSH_CUC,0,0,0,0,,,,,,,,, -tSH_tSH_CUG,0,0,0,0,,,,,,,,, -tSH_tSH_CUU,0,0,0,0,,,,,,,,, -tSH_tSH_GAG,0,0,0,0,,,,,,,,, -tSH_tSH_GCA,0,0,0,0,,,,,,,,, -tSH_tSH_GCC,0,0,0,0,,,,,,,,, -tSH_tSH_GCG,0,0,0,0,,,,,,,,, -tSH_tSH_GCU,0,0,0,0,,,,,,,,, -tSH_tSH_GGC,0,0,0,0,,,,,,,,, -tSH_tSH_GUG,0,0,0,0,,,,,,,,, -tSH_tSH_GUU,0,0,0,0,,,,,,,,, -tSH_tSH_UAG,0,0,0,0,,,,,,,,, -tSH_tSH_UCG,0,0,0,0,,,,,,,,, -tSH_tSH_UCU,0,0,0,0,,,,,,,,, -tSH_tSH_UGA,0,0,0,0,,,,,,,,, -tSH_tSH_UGC,0,0,0,0,,,,,,,,, -tSH_tSH_UGG,0,0,0,0,,,,,,,,, -tSH_tSH_UGU,0,0,0,0,,,,,,,,, -tSH_tSH_UUA,0,0,0,0,,,,,,,,, -tSH_tSH_UUC,0,0,0,0,,,,,,,,, -tSH_tSH_UUG,0,0,0,0,,,,,,,,, -tSH_tSH_UUU,0,0,0,0,,,,,,,,, -tSH_tSS_ACA,0,0,0,0,,,,,,,,, -tSH_tSS_ACC,0,0,0,0,,,,,,,,, -tSH_tSS_ACG,0,0,0,0,,,,,,,,, -tSH_tSS_ACU,0,0,0,0,,,,,,,,, -tSH_tSS_AGA,0,0,0,0,,,,,,,,, -tSH_tSS_AGC,0,0,0,0,,,,,,,,, -tSH_tSS_AGG,0,0,0,0,,,,,,,,, -tSH_tSS_AGU,0,0,0,0,,,,,,,,, -tSH_tSS_AUA,0,0,0,0,,,,,,,,, -tSH_tSS_AUC,0,0,0,0,,,,,,,,, -tSH_tSS_AUG,0,0,0,0,,,,,,,,, -tSH_tSS_AUU,0,0,0,0,,,,,,,,, -tSH_tSS_CCA,0,0,0,0,,,,,,,,, -tSH_tSS_CCC,0,0,0,0,,,,,,,,, -tSH_tSS_CCG,0,0,0,0,,,,,,,,, -tSH_tSS_CCU,0,0,0,0,,,,,,,,, -tSH_tSS_CGA,0,0,0,0,,,,,,,,, -tSH_tSS_CGC,0,0,0,0,,,,,,,,, -tSH_tSS_CGG,0,0,0,0,,,,,,,,, -tSH_tSS_CGU,0,0,0,0,,,,,,,,, -tSH_tSS_CUA,0,0,0,0,,,,,,,,, -tSH_tSS_CUC,0,0,0,0,,,,,,,,, -tSH_tSS_CUG,0,0,0,0,,,,,,,,, -tSH_tSS_CUU,0,0,0,0,,,,,,,,, -tSH_tSS_GCA,0,0,0,0,,,,,,,,, -tSH_tSS_GCC,0,0,0,0,,,,,,,,, -tSH_tSS_GCG,0,0,0,0,,,,,,,,, -tSH_tSS_GCU,0,0,0,0,,,,,,,,, -tSH_tSS_GUA,0,0,0,0,,,,,,,,, -tSH_tSS_GUC,0,0,0,0,,,,,,,,, -tSH_tSS_GUG,0,0,0,0,,,,,,,,, -tSH_tSS_GUU,0,0,0,0,,,,,,,,, -tSH_tSS_UCA,0,0,0,0,,,,,,,,, -tSH_tSS_UCC,0,0,0,0,,,,,,,,, -tSH_tSS_UCG,0,0,0,0,,,,,,,,, -tSH_tSS_UCU,0,0,0,0,,,,,,,,, -tSH_tSS_UGA,0,0,0,0,,,,,,,,, -tSH_tSS_UGC,0,0,0,0,,,,,,,,, -tSH_tSS_UGG,0,0,0,0,,,,,,,,, -tSH_tSS_UGU,0,0,0,0,,,,,,,,, -tSH_tSS_UUA,0,0,0,0,,,,,,,,, -tSH_tSS_UUC,0,0,0,0,,,,,,,,, -tSH_tSS_UUG,0,0,0,0,,,,,,,,, -tSH_tSS_UUU,0,0,0,0,,,,,,,,, -tSH_tSW_AAG,0,0,0,0,,,,,,,,, -tSH_tSW_AGA,0,0,0,0,,,,,,,,, -tSH_tSW_AGC,0,0,0,0,,,,,,,,, -tSH_tSW_AGG,0,0,0,0,,,,,,,,, -tSH_tSW_AGU,0,0,0,0,,,,,,,,, -tSH_tSW_CAG,0,0,0,0,,,,,,,,, -tSH_tSW_CGA,0,0,0,0,,,,,,,,, -tSH_tSW_CGC,0,0,0,0,,,,,,,,, -tSH_tSW_CGG,0,0,0,0,,,,,,,,, -tSH_tSW_CGU,0,0,0,0,,,,,,,,, -tSH_tSW_CUA,0,0,0,0,,,,,,,,, -tSH_tSW_CUC,0,0,0,0,,,,,,,,, -tSH_tSW_CUG,0,0,0,0,,,,,,,,, -tSH_tSW_CUU,0,0,0,0,,,,,,,,, -tSH_tSW_GAG,0,0,0,0,,,,,,,,, -tSH_tSW_GCA,0,0,0,0,,,,,,,,, -tSH_tSW_GCC,0,0,0,0,,,,,,,,, -tSH_tSW_GCG,0,0,0,0,,,,,,,,, -tSH_tSW_GCU,0,0,0,0,,,,,,,,, -tSH_tSW_GGG,0,0,0,0,,,,,,,,, -tSH_tSW_UAG,0,0,0,0,,,,,,,,, -tSH_tSW_UGA,0,0,0,0,,,,,,,,, -tSH_tSW_UGC,0,0,0,0,,,,,,,,, -tSH_tSW_UGG,0,0,0,0,,,,,,,,, -tSH_tSW_UGU,0,0,0,0,,,,,,,,, -tSH_tSW_UUA,0,0,0,0,,,,,,,,, -tSH_tSW_UUC,0,0,0,0,,,,,,,,, -tSH_tSW_UUG,0,0,0,0,,,,,,,,, -tSH_tSW_UUU,0,0,0,0,,,,,,,,, -tSW_cHH_AAA,0,0,0,0,,,,,,,,, -tSW_cHH_AAC,0,0,0,0,,,,,,,,, -tSW_cHH_AAU,0,0,0,0,,,,,,,,, -tSW_cHH_ACA,0,0,0,0,,,,,,,,, -tSW_cHH_ACC,0,0,0,0,,,,,,,,, -tSW_cHH_ACU,0,0,0,0,,,,,,,,, -tSW_cHH_AGA,0,0,0,0,,,,,,,,, -tSW_cHH_AGC,0,0,0,0,,,,,,,,, -tSW_cHH_AGG,0,0,0,0,,,,,,,,, -tSW_cHH_AGU,0,0,0,0,,,,,,,,, -tSW_cHH_AUA,0,0,0,0,,,,,,,,, -tSW_cHH_AUC,0,0,0,0,,,,,,,,, -tSW_cHH_AUG,0,0,0,0,,,,,,,,, -tSW_cHH_AUU,0,0,0,0,,,,,,,,, -tSW_cHH_CAA,0,0,0,0,,,,,,,,, -tSW_cHH_CAC,0,0,0,0,,,,,,,,, -tSW_cHH_CAU,0,0,0,0,,,,,,,,, -tSW_cHH_CCA,0,0,0,0,,,,,,,,, -tSW_cHH_CCC,0,0,0,0,,,,,,,,, -tSW_cHH_CCU,0,0,0,0,,,,,,,,, -tSW_cHH_CGU,0,0,0,0,,,,,,,,, -tSW_cHH_CUA,0,0,0,0,,,,,,,,, -tSW_cHH_CUC,0,0,0,0,,,,,,,,, -tSW_cHH_CUG,0,0,0,0,,,,,,,,, -tSW_cHH_CUU,0,0,0,0,,,,,,,,, -tSW_cHH_GAA,0,0,0,0,,,,,,,,, -tSW_cHH_GAC,0,0,0,0,,,,,,,,, -tSW_cHH_GAU,0,0,0,0,,,,,,,,, -tSW_cHH_GCA,0,0,0,0,,,,,,,,, -tSW_cHH_GCC,0,0,0,0,,,,,,,,, -tSW_cHH_GCU,0,0,0,0,,,,,,,,, -tSW_cHH_GGA,0,0,0,0,,,,,,,,, -tSW_cHH_GGC,0,0,0,0,,,,,,,,, -tSW_cHH_GGG,0,0,0,0,,,,,,,,, -tSW_cHH_GGU,0,0,0,0,,,,,,,,, -tSW_cHH_GUA,0,0,0,0,,,,,,,,, -tSW_cHH_GUC,0,0,0,0,,,,,,,,, -tSW_cHH_GUG,0,0,0,0,,,,,,,,, -tSW_cHH_GUU,0,0,0,0,,,,,,,,, -tSW_cHH_UAA,0,0,0,0,,,,,,,,, -tSW_cHH_UAC,0,0,0,0,,,,,,,,, -tSW_cHH_UAU,0,0,0,0,,,,,,,,, -tSW_cHH_UCA,0,0,0,0,,,,,,,,, -tSW_cHH_UCC,0,0,0,0,,,,,,,,, -tSW_cHH_UCU,0,0,0,0,,,,,,,,, -tSW_cHH_UGU,0,0,0,0,,,,,,,,, -tSW_cHH_UUA,0,0,0,0,,,,,,,,, -tSW_cHH_UUC,0,0,0,0,,,,,,,,, -tSW_cHH_UUG,0,0,0,0,,,,,,,,, -tSW_cHH_UUU,0,0,0,0,,,,,,,,, -tSW_cHS_AGA,0,0,0,0,,,,,,,,, -tSW_cHS_AGC,0,0,0,0,,,,,,,,, -tSW_cHS_AGG,0,0,0,0,,,,,,,,, -tSW_cHS_AGU,0,0,0,0,,,,,,,,, -tSW_cHS_CGC,0,0,0,0,,,,,,,,, -tSW_cHS_CGU,0,0,0,0,,,,,,,,, -tSW_cHS_GGA,0,0,0,0,,,,,,,,, -tSW_cHS_GGC,0,0,0,0,,,,,,,,, -tSW_cHS_GGG,0,0,0,0,,,,,,,,, -tSW_cHS_GGU,0,0,0,0,,,,,,,,, -tSW_cHS_UGC,0,0,0,0,,,,,,,,, -tSW_cHS_UGU,0,0,0,0,,,,,,,,, -tSW_cHW_AAA,0,0,0,0,,,,,,,,, -tSW_cHW_AAC,0,0,0,0,,,,,,,,, -tSW_cHW_ACA,0,0,0,0,,,,,,,,, -tSW_cHW_ACG,0,0,0,0,,,,,,,,, -tSW_cHW_ACU,0,0,0,0,,,,,,,,, -tSW_cHW_AGA,0,0,0,0,,,,,,,,, -tSW_cHW_AGC,0,0,0,0,,,,,,,,, -tSW_cHW_AGG,0,0,0,0,,,,,,,,, -tSW_cHW_AGU,0,0,0,0,,,,,,,,, -tSW_cHW_AUG,0,0,0,0,,,,,,,,, -tSW_cHW_CAA,0,0,0,0,,,,,,,,, -tSW_cHW_CAC,0,0,0,0,,,,,,,,, -tSW_cHW_CCA,0,0,0,0,,,,,,,,, -tSW_cHW_CCG,0,0,0,0,,,,,,,,, -tSW_cHW_CCU,0,0,0,0,,,,,,,,, -tSW_cHW_CUG,0,0,0,0,,,,,,,,, -tSW_cHW_GAA,0,0,0,0,,,,,,,,, -tSW_cHW_GAC,0,0,0,0,,,,,,,,, -tSW_cHW_GCA,0,0,0,0,,,,,,,,, -tSW_cHW_GCG,0,0,0,0,,,,,,,,, -tSW_cHW_GCU,0,0,0,0,,,,,,,,, -tSW_cHW_GGA,0,0,0,0,,,,,,,,, -tSW_cHW_GGC,0,0,0,0,,,,,,,,, -tSW_cHW_GGG,0,0,0,0,,,,,,,,, -tSW_cHW_GGU,0,0,0,0,,,,,,,,, -tSW_cHW_GUG,0,0,0,0,,,,,,,,, -tSW_cHW_UAA,0,0,0,0,,,,,,,,, -tSW_cHW_UAC,0,0,0,0,,,,,,,,, -tSW_cHW_UCA,0,0,0,0,,,,,,,,, -tSW_cHW_UCG,0,0,0,0,,,,,,,,, -tSW_cHW_UCU,0,0,0,0,,,,,,,,, -tSW_cHW_UUG,0,0,0,0,,,,,,,,, -tSW_cSH_ACG,0,0,0,0,,,,,,,,, -tSW_cSH_AGA,0,0,0,0,,,,,,,,, -tSW_cSH_AGC,0,0,0,0,,,,,,,,, -tSW_cSH_AGG,0,0,0,0,,,,,,,,, -tSW_cSH_AGU,0,0,0,0,,,,,,,,, -tSW_cSH_AUG,0,0,0,0,,,,,,,,, -tSW_cSH_CCG,0,0,0,0,,,,,,,,, -tSW_cSH_CUG,0,0,0,0,,,,,,,,, -tSW_cSH_GCG,0,0,0,0,,,,,,,,, -tSW_cSH_GGA,0,0,0,0,,,,,,,,, -tSW_cSH_GGC,0,0,0,0,,,,,,,,, -tSW_cSH_GGG,0,0,0,0,,,,,,,,, -tSW_cSH_GGU,0,0,0,0,,,,,,,,, -tSW_cSH_GUG,0,0,0,0,,,,,,,,, -tSW_cSH_UCG,0,0,0,0,,,,,,,,, -tSW_cSH_UUG,0,0,0,0,,,,,,,,, -tSW_cSS_AGA,0,0,0,0,,,,,,,,, -tSW_cSS_AGC,0,0,0,0,,,,,,,,, -tSW_cSS_AGG,0,0,0,0,,,,,,,,, -tSW_cSS_AGU,0,0,0,0,,,,,,,,, -tSW_cSS_GGA,0,0,0,0,,,,,,,,, -tSW_cSS_GGC,0,0,0,0,,,,,,,,, -tSW_cSS_GGG,0,0,0,0,,,,,,,,, -tSW_cSS_GGU,0,0,0,0,,,,,,,,, -tSW_cSW_AGA,0,0,0,0,,,,,,,,, -tSW_cSW_AGC,0,0,0,0,,,,,,,,, -tSW_cSW_AGG,0,0,0,0,,,,,,,,, -tSW_cSW_AGU,0,0,0,0,,,,,,,,, -tSW_cSW_GGA,0,0,0,0,,,,,,,,, -tSW_cSW_GGC,0,0,0,0,,,,,,,,, -tSW_cSW_GGG,0,0,0,0,,,,,,,,, -tSW_cSW_GGU,0,0,0,0,,,,,,,,, -tSW_tHH_ACC,0,0,0,0,,,,,,,,, -tSW_tHH_AGA,0,0,0,0,,,,,,,,, -tSW_tHH_AGC,0,0,0,0,,,,,,,,, -tSW_tHH_AGG,0,0,0,0,,,,,,,,, -tSW_tHH_AGU,0,0,0,0,,,,,,,,, -tSW_tHH_AUG,0,0,0,0,,,,,,,,, -tSW_tHH_AUU,0,0,0,0,,,,,,,,, -tSW_tHH_CCC,0,0,0,0,,,,,,,,, -tSW_tHH_CGU,0,0,0,0,,,,,,,,, -tSW_tHH_CUG,0,0,0,0,,,,,,,,, -tSW_tHH_CUU,0,0,0,0,,,,,,,,, -tSW_tHH_GCC,0,0,0,0,,,,,,,,, -tSW_tHH_GGA,0,0,0,0,,,,,,,,, -tSW_tHH_GGC,0,0,0,0,,,,,,,,, -tSW_tHH_GGG,0,0,0,0,,,,,,,,, -tSW_tHH_GGU,0,0,0,0,,,,,,,,, -tSW_tHH_GUG,0,0,0,0,,,,,,,,, -tSW_tHH_GUU,0,0,0,0,,,,,,,,, -tSW_tHH_UCC,0,0,0,0,,,,,,,,, -tSW_tHH_UGU,0,0,0,0,,,,,,,,, -tSW_tHH_UUG,0,0,0,0,,,,,,,,, -tSW_tHH_UUU,0,0,0,0,,,,,,,,, -tSW_tHS_ACG,0,0,0,0,,,,,,,,, -tSW_tHS_AGA,0,0,0,0,,,,,,,,, -tSW_tHS_AGC,0,0,0,0,,,,,,,,, -tSW_tHS_AGG,0,0,0,0,,,,,,,,, -tSW_tHS_AGU,0,0,0,0,,,,,,,,, -tSW_tHS_AUC,0,0,0,0,,,,,,,,, -tSW_tHS_AUU,0,0,0,0,,,,,,,,, -tSW_tHS_CCG,0,0,0,0,,,,,,,,, -tSW_tHS_CGA,0,0,0,0,,,,,,,,, -tSW_tHS_CGC,0,0,0,0,,,,,,,,, -tSW_tHS_CGU,0,0,0,0,,,,,,,,, -tSW_tHS_CUC,0,0,0,0,,,,,,,,, -tSW_tHS_CUU,0,0,0,0,,,,,,,,, -tSW_tHS_GCG,0,0,0,0,,,,,,,,, -tSW_tHS_GGA,0,0,0,0,,,,,,,,, -tSW_tHS_GGC,0,0,0,0,,,,,,,,, -tSW_tHS_GGG,0,0,0,0,,,,,,,,, -tSW_tHS_GGU,0,0,0,0,,,,,,,,, -tSW_tHS_GUC,0,0,0,0,,,,,,,,, -tSW_tHS_GUU,0,0,0,0,,,,,,,,, -tSW_tHS_UCG,0,0,0,0,,,,,,,,, -tSW_tHS_UGA,0,0,0,0,,,,,,,,, -tSW_tHS_UGC,0,0,0,0,,,,,,,,, -tSW_tHS_UGU,0,0,0,0,,,,,,,,, -tSW_tHS_UUC,0,0,0,0,,,,,,,,, -tSW_tHS_UUU,0,0,0,0,,,,,,,,, -tSW_tHW_AAG,0,0,0,0,,,,,,,,, -tSW_tHW_ACA,0,0,0,0,,,,,,,,, -tSW_tHW_ACG,0,0,0,0,,,,,,,,, -tSW_tHW_ACU,0,0,0,0,,,,,,,,, -tSW_tHW_AGA,0,0,0,0,,,,,,,,, -tSW_tHW_AGC,0,0,0,0,,,,,,,,, -tSW_tHW_AGG,0,0,0,0,,,,,,,,, -tSW_tHW_AGU,0,0,0,0,,,,,,,,, -tSW_tHW_AUA,0,0,0,0,,,,,,,,, -tSW_tHW_AUC,0,0,0,0,,,,,,,,, -tSW_tHW_CAG,0,0,0,0,,,,,,,,, -tSW_tHW_CCA,0,0,0,0,,,,,,,,, -tSW_tHW_CCG,0,0,0,0,,,,,,,,, -tSW_tHW_CCU,0,0,0,0,,,,,,,,, -tSW_tHW_CUA,0,0,0,0,,,,,,,,, -tSW_tHW_CUC,0,0,0,0,,,,,,,,, -tSW_tHW_GAG,0,0,0,0,,,,,,,,, -tSW_tHW_GCA,0,0,0,0,,,,,,,,, -tSW_tHW_GCG,0,0,0,0,,,,,,,,, -tSW_tHW_GCU,0,0,0,0,,,,,,,,, -tSW_tHW_GGA,0,0,0,0,,,,,,,,, -tSW_tHW_GGC,0,0,0,0,,,,,,,,, -tSW_tHW_GGG,0,0,0,0,,,,,,,,, -tSW_tHW_GGU,0,0,0,0,,,,,,,,, -tSW_tHW_GUA,0,0,0,0,,,,,,,,, -tSW_tHW_GUC,0,0,0,0,,,,,,,,, -tSW_tHW_UAG,0,0,0,0,,,,,,,,, -tSW_tHW_UCA,0,0,0,0,,,,,,,,, -tSW_tHW_UCG,0,0,0,0,,,,,,,,, -tSW_tHW_UCU,0,0,0,0,,,,,,,,, -tSW_tHW_UUA,0,0,0,0,,,,,,,,, -tSW_tHW_UUC,0,0,0,0,,,,,,,,, -tSW_tSH_AAG,0,0,0,0,,,,,,,,, -tSW_tSH_ACG,0,0,0,0,,,,,,,,, -tSW_tSH_ACU,0,0,0,0,,,,,,,,, -tSW_tSH_AGA,0,0,0,0,,,,,,,,, -tSW_tSH_AGC,0,0,0,0,,,,,,,,, -tSW_tSH_AGG,0,0,0,0,,,,,,,,, -tSW_tSH_AGU,0,0,0,0,,,,,,,,, -tSW_tSH_AUG,0,0,0,0,,,,,,,,, -tSW_tSH_AUU,0,0,0,0,,,,,,,,, -tSW_tSH_CAG,0,0,0,0,,,,,,,,, -tSW_tSH_CCG,0,0,0,0,,,,,,,,, -tSW_tSH_CCU,0,0,0,0,,,,,,,,, -tSW_tSH_CGC,0,0,0,0,,,,,,,,, -tSW_tSH_CUG,0,0,0,0,,,,,,,,, -tSW_tSH_CUU,0,0,0,0,,,,,,,,, -tSW_tSH_GAG,0,0,0,0,,,,,,,,, -tSW_tSH_GCG,0,0,0,0,,,,,,,,, -tSW_tSH_GCU,0,0,0,0,,,,,,,,, -tSW_tSH_GGA,0,0,0,0,,,,,,,,, -tSW_tSH_GGC,0,0,0,0,,,,,,,,, -tSW_tSH_GGG,0,0,0,0,,,,,,,,, -tSW_tSH_GGU,0,0,0,0,,,,,,,,, -tSW_tSH_GUG,0,0,0,0,,,,,,,,, -tSW_tSH_GUU,0,0,0,0,,,,,,,,, -tSW_tSH_UAG,0,0,0,0,,,,,,,,, -tSW_tSH_UCG,0,0,0,0,,,,,,,,, -tSW_tSH_UCU,0,0,0,0,,,,,,,,, -tSW_tSH_UGC,0,0,0,0,,,,,,,,, -tSW_tSH_UUG,0,0,0,0,,,,,,,,, -tSW_tSH_UUU,0,0,0,0,,,,,,,,, -tSW_tSW_AAG,0,0,0,0,,,,,,,,, -tSW_tSW_AGA,0,0,0,0,,,,,,,,, -tSW_tSW_AGC,0,0,0,0,,,,,,,,, -tSW_tSW_AGG,0,0,0,0,,,,,,,,, -tSW_tSW_AGU,0,0,0,0,,,,,,,,, -tSW_tSW_CAG,0,0,0,0,,,,,,,,, -tSW_tSW_CGG,0,0,0,0,,,,,,,,, -tSW_tSW_GAG,0,0,0,0,,,,,,,,, -tSW_tSW_GGA,0,0,0,0,,,,,,,,, -tSW_tSW_GGC,0,0,0,0,,,,,,,,, -tSW_tSW_GGG,0,0,0,0,,,,,,,,, -tSW_tSW_GGU,0,0,0,0,,,,,,,,, -tSW_tSW_UAG,0,0,0,0,,,,,,,,, -tSW_tSW_UGG,0,0,0,0,,,,,,,,, -tSW_tSS_AAC,0,0,0,0,,,,,,,,, -tSW_tSS_AAU,0,0,0,0,,,,,,,,, -tSW_tSS_ACC,0,0,0,0,,,,,,,,, -tSW_tSS_ACU,0,0,0,0,,,,,,,,, -tSW_tSS_AGA,0,0,0,0,,,,,,,,, -tSW_tSS_AGC,0,0,0,0,,,,,,,,, -tSW_tSS_AGG,0,0,0,0,,,,,,,,, -tSW_tSS_AGU,0,0,0,0,,,,,,,,, -tSW_tSS_AUC,0,0,0,0,,,,,,,,, -tSW_tSS_AUU,0,0,0,0,,,,,,,,, -tSW_tSS_CAC,0,0,0,0,,,,,,,,, -tSW_tSS_CAU,0,0,0,0,,,,,,,,, -tSW_tSS_CCC,0,0,0,0,,,,,,,,, -tSW_tSS_CCU,0,0,0,0,,,,,,,,, -tSW_tSS_CGC,0,0,0,0,,,,,,,,, -tSW_tSS_CGU,0,0,0,0,,,,,,,,, -tSW_tSS_CUC,0,0,0,0,,,,,,,,, -tSW_tSS_CUU,0,0,0,0,,,,,,,,, -tSW_tSS_GAC,0,0,0,0,,,,,,,,, -tSW_tSS_GAU,0,0,0,0,,,,,,,,, -tSW_tSS_GCC,0,0,0,0,,,,,,,,, -tSW_tSS_GCU,0,0,0,0,,,,,,,,, -tSW_tSS_GGA,0,0,0,0,,,,,,,,, -tSW_tSS_GGC,0,0,0,0,,,,,,,,, -tSW_tSS_GGG,0,0,0,0,,,,,,,,, -tSW_tSS_GGU,0,0,0,0,,,,,,,,, -tSW_tSS_GUC,0,0,0,0,,,,,,,,, -tSW_tSS_GUU,0,0,0,0,,,,,,,,, -tSW_tSS_UAC,0,0,0,0,,,,,,,,, -tSW_tSS_UAU,0,0,0,0,,,,,,,,, -tSW_tSS_UCC,0,0,0,0,,,,,,,,, -tSW_tSS_UCU,0,0,0,0,,,,,,,,, -tSW_tSS_UGC,0,0,0,0,,,,,,,,, -tSW_tSS_UGU,0,0,0,0,,,,,,,,, -tSW_tSS_UUC,0,0,0,0,,,,,,,,, -tSW_tSS_UUU,0,0,0,0,,,,,,,,, -tWH_cSH_ACA,0,0,0,0,,,,,,,,, -tWH_cSH_ACC,0,0,0,0,,,,,,,,, -tWH_cSH_ACG,0,0,0,0,,,,,,,,, -tWH_cSH_ACU,0,0,0,0,,,,,,,,, -tWH_cSH_AUA,0,0,0,0,,,,,,,,, -tWH_cSH_AUC,0,0,0,0,,,,,,,,, -tWH_cSH_AUG,0,0,0,0,,,,,,,,, -tWH_cSH_AUU,0,0,0,0,,,,,,,,, -tWH_cSH_CCG,0,0,0,0,,,,,,,,, -tWH_cSH_CUA,0,0,0,0,,,,,,,,, -tWH_cSH_CUC,0,0,0,0,,,,,,,,, -tWH_cSH_CUG,0,0,0,0,,,,,,,,, -tWH_cSH_CUU,0,0,0,0,,,,,,,,, -tWH_cSH_GAA,0,0,0,0,,,,,,,,, -tWH_cSH_GAC,0,0,0,0,,,,,,,,, -tWH_cSH_GAG,0,0,0,0,,,,,,,,, -tWH_cSH_GAU,0,0,0,0,,,,,,,,, -tWH_cSH_GCA,0,0,0,0,,,,,,,,, -tWH_cSH_GCC,0,0,0,0,,,,,,,,, -tWH_cSH_GCG,0,0,0,0,,,,,,,,, -tWH_cSH_GCU,0,0,0,0,,,,,,,,, -tWH_cSH_GUG,0,0,0,0,,,,,,,,, -tWH_cSH_UCA,0,0,0,0,,,,,,,,, -tWH_cSH_UCC,0,0,0,0,,,,,,,,, -tWH_cSH_UCG,0,0,0,0,,,,,,,,, -tWH_cSH_UCU,0,0,0,0,,,,,,,,, -tWH_cSH_UUG,0,0,0,0,,,,,,,,, -tWH_cSS_ACA,0,0,0,0,,,,,,,,, -tWH_cSS_ACC,0,0,0,0,,,,,,,,, -tWH_cSS_ACG,0,0,0,0,,,,,,,,, -tWH_cSS_ACU,0,0,0,0,,,,,,,,, -tWH_cSS_AUA,0,0,0,0,,,,,,,,, -tWH_cSS_AUC,0,0,0,0,,,,,,,,, -tWH_cSS_AUG,0,0,0,0,,,,,,,,, -tWH_cSS_AUU,0,0,0,0,,,,,,,,, -tWH_cSS_CUA,0,0,0,0,,,,,,,,, -tWH_cSS_CUC,0,0,0,0,,,,,,,,, -tWH_cSS_CUG,0,0,0,0,,,,,,,,, -tWH_cSS_CUU,0,0,0,0,,,,,,,,, -tWH_cSS_GAA,0,0,0,0,,,,,,,,, -tWH_cSS_GAC,0,0,0,0,,,,,,,,, -tWH_cSS_GAG,0,0,0,0,,,,,,,,, -tWH_cSS_GAU,0,0,0,0,,,,,,,,, -tWH_cSS_GCA,0,0,0,0,,,,,,,,, -tWH_cSS_GCC,0,0,0,0,,,,,,,,, -tWH_cSS_GCG,0,0,0,0,,,,,,,,, -tWH_cSS_GCU,0,0,0,0,,,,,,,,, -tWH_cSS_UCA,0,0,0,0,,,,,,,,, -tWH_cSS_UCC,0,0,0,0,,,,,,,,, -tWH_cSS_UCG,0,0,0,0,,,,,,,,, -tWH_cSS_UCU,0,0,0,0,,,,,,,,, -tWH_cSW_ACA,0,0,0,0,,,,,,,,, -tWH_cSW_ACC,0,0,0,0,,,,,,,,, -tWH_cSW_ACG,0,0,0,0,,,,,,,,, -tWH_cSW_ACU,0,0,0,0,,,,,,,,, -tWH_cSW_AUA,0,0,0,0,,,,,,,,, -tWH_cSW_AUC,0,0,0,0,,,,,,,,, -tWH_cSW_AUG,0,0,0,0,,,,,,,,, -tWH_cSW_AUU,0,0,0,0,,,,,,,,, -tWH_cSW_CUA,0,0,0,0,,,,,,,,, -tWH_cSW_CUC,0,0,0,0,,,,,,,,, -tWH_cSW_CUG,0,0,0,0,,,,,,,,, -tWH_cSW_CUU,0,0,0,0,,,,,,,,, -tWH_cSW_GAA,0,0,0,0,,,,,,,,, -tWH_cSW_GAC,0,0,0,0,,,,,,,,, -tWH_cSW_GAG,0,0,0,0,,,,,,,,, -tWH_cSW_GAU,0,0,0,0,,,,,,,,, -tWH_cSW_GCA,0,0,0,0,,,,,,,,, -tWH_cSW_GCC,0,0,0,0,,,,,,,,, -tWH_cSW_GCG,0,0,0,0,,,,,,,,, -tWH_cSW_GCU,0,0,0,0,,,,,,,,, -tWH_cSW_UCA,0,0,0,0,,,,,,,,, -tWH_cSW_UCC,0,0,0,0,,,,,,,,, -tWH_cSW_UCG,0,0,0,0,,,,,,,,, -tWH_cSW_UCU,0,0,0,0,,,,,,,,, -tWH_tSH_AAG,0,0,0,0,,,,,,,,, -tWH_tSH_ACA,0,0,0,0,,,,,,,,, -tWH_tSH_ACC,0,0,0,0,,,,,,,,, -tWH_tSH_ACG,0,0,0,0,,,,,,,,, -tWH_tSH_ACU,0,0,0,0,,,,,,,,, -tWH_tSH_AGC,0,0,0,0,,,,,,,,, -tWH_tSH_AUA,0,0,0,0,,,,,,,,, -tWH_tSH_AUC,0,0,0,0,,,,,,,,, -tWH_tSH_AUG,0,0,0,0,,,,,,,,, -tWH_tSH_AUU,0,0,0,0,,,,,,,,, -tWH_tSH_CAG,0,0,0,0,,,,,,,,, -tWH_tSH_CCG,0,0,0,0,,,,,,,,, -tWH_tSH_CCU,0,0,0,0,,,,,,,,, -tWH_tSH_CGC,0,0,0,0,,,,,,,,, -tWH_tSH_CUA,0,0,0,0,,,,,,,,, -tWH_tSH_CUC,0,0,0,0,,,,,,,,, -tWH_tSH_CUG,0,0,0,0,,,,,,,,, -tWH_tSH_CUU,0,0,0,0,,,,,,,,, -tWH_tSH_GAA,0,0,0,0,,,,,,,,, -tWH_tSH_GAC,0,0,0,0,,,,,,,,, -tWH_tSH_GAG,0,0,0,0,,,,,,,,, -tWH_tSH_GAU,0,0,0,0,,,,,,,,, -tWH_tSH_GCA,0,0,0,0,,,,,,,,, -tWH_tSH_GCC,0,0,0,0,,,,,,,,, -tWH_tSH_GCG,0,0,0,0,,,,,,,,, -tWH_tSH_GCU,0,0,0,0,,,,,,,,, -tWH_tSH_GGC,0,0,0,0,,,,,,,,, -tWH_tSH_GUG,0,0,0,0,,,,,,,,, -tWH_tSH_GUU,0,0,0,0,,,,,,,,, -tWH_tSH_UAG,0,0,0,0,,,,,,,,, -tWH_tSH_UCA,0,0,0,0,,,,,,,,, -tWH_tSH_UCC,0,0,0,0,,,,,,,,, -tWH_tSH_UCG,0,0,0,0,,,,,,,,, -tWH_tSH_UCU,0,0,0,0,,,,,,,,, -tWH_tSH_UGC,0,0,0,0,,,,,,,,, -tWH_tSH_UUG,0,0,0,0,,,,,,,,, -tWH_tSH_UUU,0,0,0,0,,,,,,,,, -tWH_tSS_ACA,0,0,0,0,,,,,,,,, -tWH_tSS_ACC,0,0,0,0,,,,,,,,, -tWH_tSS_ACG,0,0,0,0,,,,,,,,, -tWH_tSS_ACU,0,0,0,0,,,,,,,,, -tWH_tSS_AUA,0,0,0,0,,,,,,,,, -tWH_tSS_AUC,0,0,0,0,,,,,,,,, -tWH_tSS_AUG,0,0,0,0,,,,,,,,, -tWH_tSS_AUU,0,0,0,0,,,,,,,,, -tWH_tSS_CCA,0,0,0,0,,,,,,,,, -tWH_tSS_CCC,0,0,0,0,,,,,,,,, -tWH_tSS_CCG,0,0,0,0,,,,,,,,, -tWH_tSS_CCU,0,0,0,0,,,,,,,,, -tWH_tSS_CUA,0,0,0,0,,,,,,,,, -tWH_tSS_CUC,0,0,0,0,,,,,,,,, -tWH_tSS_CUG,0,0,0,0,,,,,,,,, -tWH_tSS_CUU,0,0,0,0,,,,,,,,, -tWH_tSS_GAA,0,0,0,0,,,,,,,,, -tWH_tSS_GAC,0,0,0,0,,,,,,,,, -tWH_tSS_GAG,0,0,0,0,,,,,,,,, -tWH_tSS_GAU,0,0,0,0,,,,,,,,, -tWH_tSS_GCA,0,0,0,0,,,,,,,,, -tWH_tSS_GCC,0,0,0,0,,,,,,,,, -tWH_tSS_GCG,0,0,0,0,,,,,,,,, -tWH_tSS_GCU,0,0,0,0,,,,,,,,, -tWH_tSS_GUA,0,0,0,0,,,,,,,,, -tWH_tSS_GUC,0,0,0,0,,,,,,,,, -tWH_tSS_GUG,0,0,0,0,,,,,,,,, -tWH_tSS_GUU,0,0,0,0,,,,,,,,, -tWH_tSS_UCA,0,0,0,0,,,,,,,,, -tWH_tSS_UCC,0,0,0,0,,,,,,,,, -tWH_tSS_UCG,0,0,0,0,,,,,,,,, -tWH_tSS_UCU,0,0,0,0,,,,,,,,, -tWH_tSS_UUA,0,0,0,0,,,,,,,,, -tWH_tSS_UUC,0,0,0,0,,,,,,,,, -tWH_tSS_UUG,0,0,0,0,,,,,,,,, -tWH_tSS_UUU,0,0,0,0,,,,,,,,, -tWH_tSW_AAG,0,0,0,0,,,,,,,,, -tWH_tSW_ACA,0,0,0,0,,,,,,,,, -tWH_tSW_ACC,0,0,0,0,,,,,,,,, -tWH_tSW_ACG,0,0,0,0,,,,,,,,, -tWH_tSW_ACU,0,0,0,0,,,,,,,,, -tWH_tSW_AGG,0,0,0,0,,,,,,,,, -tWH_tSW_AUA,0,0,0,0,,,,,,,,, -tWH_tSW_AUC,0,0,0,0,,,,,,,,, -tWH_tSW_AUG,0,0,0,0,,,,,,,,, -tWH_tSW_AUU,0,0,0,0,,,,,,,,, -tWH_tSW_CAG,0,0,0,0,,,,,,,,, -tWH_tSW_CGG,0,0,0,0,,,,,,,,, -tWH_tSW_CUA,0,0,0,0,,,,,,,,, -tWH_tSW_CUC,0,0,0,0,,,,,,,,, -tWH_tSW_CUG,0,0,0,0,,,,,,,,, -tWH_tSW_CUU,0,0,0,0,,,,,,,,, -tWH_tSW_GAA,0,0,0,0,,,,,,,,, -tWH_tSW_GAC,0,0,0,0,,,,,,,,, -tWH_tSW_GAG,0,0,0,0,,,,,,,,, -tWH_tSW_GAU,0,0,0,0,,,,,,,,, -tWH_tSW_GCA,0,0,0,0,,,,,,,,, -tWH_tSW_GCC,0,0,0,0,,,,,,,,, -tWH_tSW_GCG,0,0,0,0,,,,,,,,, -tWH_tSW_GCU,0,0,0,0,,,,,,,,, -tWH_tSW_GGG,0,0,0,0,,,,,,,,, -tWH_tSW_UAG,0,0,0,0,,,,,,,,, -tWH_tSW_UCA,0,0,0,0,,,,,,,,, -tWH_tSW_UCC,0,0,0,0,,,,,,,,, -tWH_tSW_UCG,0,0,0,0,,,,,,,,, -tWH_tSW_UCU,0,0,0,0,,,,,,,,, -tWH_tSW_UGG,0,0,0,0,,,,,,,,, -tWW_cHH_AAA,0,0,0,0,,,,,,,,, -tWW_cHH_AAC,0,0,0,0,,,,,,,,, -tWW_cHH_AAU,0,0,0,0,,,,,,,,, -tWW_cHH_ACA,0,0,0,0,,,,,,,,, -tWW_cHH_ACC,0,0,0,0,,,,,,,,, -tWW_cHH_ACU,0,0,0,0,,,,,,,,, -tWW_cHH_AGA,0,0,0,0,,,,,,,,, -tWW_cHH_AGC,0,0,0,0,,,,,,,,, -tWW_cHH_AGG,0,0,0,0,,,,,,,,, -tWW_cHH_AGU,0,0,0,0,,,,,,,,, -tWW_cHH_AUA,0,0,0,0,,,,,,,,, -tWW_cHH_AUC,0,0,0,0,,,,,,,,, -tWW_cHH_AUG,0,0,0,0,,,,,,,,, -tWW_cHH_AUU,0,0,0,0,,,,,,,,, -tWW_cHH_CAA,0,0,0,0,,,,,,,,, -tWW_cHH_CAC,0,0,0,0,,,,,,,,, -tWW_cHH_CAU,0,0,0,0,,,,,,,,, -tWW_cHH_CCA,0,0,0,0,,,,,,,,, -tWW_cHH_CCC,0,0,0,0,,,,,,,,, -tWW_cHH_CCU,0,0,0,0,,,,,,,,, -tWW_cHH_CGU,0,0,0,0,,,,,,,,, -tWW_cHH_CUA,0,0,0,0,,,,,,,,, -tWW_cHH_CUC,0,0,0,0,,,,,,,,, -tWW_cHH_CUG,0,0,0,0,,,,,,,,, -tWW_cHH_CUU,0,0,0,0,,,,,,,,, -tWW_cHH_GAA,0,0,0,0,,,,,,,,, -tWW_cHH_GAC,0,0,0,0,,,,,,,,, -tWW_cHH_GAG,0,0,0,0,,,,,,,,, -tWW_cHH_GAU,0,0,0,0,,,,,,,,, -tWW_cHH_GCA,0,0,0,0,,,,,,,,, -tWW_cHH_GCC,0,0,0,0,,,,,,,,, -tWW_cHH_GCU,0,0,0,0,,,,,,,,, -tWW_cHH_GGU,0,0,0,0,,,,,,,,, -tWW_cHH_GUA,0,0,0,0,,,,,,,,, -tWW_cHH_GUC,0,0,0,0,,,,,,,,, -tWW_cHH_GUG,0,0,0,0,,,,,,,,, -tWW_cHH_GUU,0,0,0,0,,,,,,,,, -tWW_cHH_UAA,0,0,0,0,,,,,,,,, -tWW_cHH_UAC,0,0,0,0,,,,,,,,, -tWW_cHH_UAU,0,0,0,0,,,,,,,,, -tWW_cHH_UCA,0,0,0,0,,,,,,,,, -tWW_cHH_UCC,0,0,0,0,,,,,,,,, -tWW_cHH_UCU,0,0,0,0,,,,,,,,, -tWW_cHH_UGU,0,0,0,0,,,,,,,,, -tWW_cHH_UUA,0,0,0,0,,,,,,,,, -tWW_cHH_UUC,0,0,0,0,,,,,,,,, -tWW_cHH_UUG,0,0,0,0,,,,,,,,, -tWW_cHH_UUU,0,0,0,0,,,,,,,,, -tWW_cHS_AGA,0,0,0,0,,,,,,,,, -tWW_cHS_AGC,0,0,0,0,,,,,,,,, -tWW_cHS_AGG,0,0,0,0,,,,,,,,, -tWW_cHS_AGU,0,0,0,0,,,,,,,,, -tWW_cHS_CGC,0,0,0,0,,,,,,,,, -tWW_cHS_CGU,0,0,0,0,,,,,,,,, -tWW_cHS_GAA,0,0,0,0,,,,,,,,, -tWW_cHS_GAC,0,0,0,0,,,,,,,,, -tWW_cHS_GAG,0,0,0,0,,,,,,,,, -tWW_cHS_GAU,0,0,0,0,,,,,,,,, -tWW_cHS_GGC,0,0,0,0,,,,,,,,, -tWW_cHS_GGU,0,0,0,0,,,,,,,,, -tWW_cHS_UGC,0,0,0,0,,,,,,,,, -tWW_cHS_UGU,0,0,0,0,,,,,,,,, -tWW_cHW_AAA,0,0,0,0,,,,,,,,, -tWW_cHW_AAC,0,0,0,0,,,,,,,,, -tWW_cHW_ACA,0,0,0,0,,,,,,,,, -tWW_cHW_ACG,0,0,0,0,,,,,,,,, -tWW_cHW_ACU,0,0,0,0,,,,,,,,, -tWW_cHW_AGA,0,0,0,0,,,,,,,,, -tWW_cHW_AGC,0,0,0,0,,,,,,,,, -tWW_cHW_AGG,0,0,0,0,,,,,,,,, -tWW_cHW_AGU,0,0,0,0,,,,,,,,, -tWW_cHW_AUG,0,0,0,0,,,,,,,,, -tWW_cHW_CAA,0,0,0,0,,,,,,,,, -tWW_cHW_CAC,0,0,0,0,,,,,,,,, -tWW_cHW_CCA,0,0,0,0,,,,,,,,, -tWW_cHW_CCG,0,0,0,0,,,,,,,,, -tWW_cHW_CCU,0,0,0,0,,,,,,,,, -tWW_cHW_CUG,0,0,0,0,,,,,,,,, -tWW_cHW_GAA,0,0,0,0,,,,,,,,, -tWW_cHW_GAC,0,0,0,0,,,,,,,,, -tWW_cHW_GAG,0,0,0,0,,,,,,,,, -tWW_cHW_GAU,0,0,0,0,,,,,,,,, -tWW_cHW_GCA,0,0,0,0,,,,,,,,, -tWW_cHW_GCG,0,0,0,0,,,,,,,,, -tWW_cHW_GCU,0,0,0,0,,,,,,,,, -tWW_cHW_GUG,0,0,0,0,,,,,,,,, -tWW_cHW_UAA,0,0,0,0,,,,,,,,, -tWW_cHW_UAC,0,0,0,0,,,,,,,,, -tWW_cHW_UCA,0,0,0,0,,,,,,,,, -tWW_cHW_UCG,0,0,0,0,,,,,,,,, -tWW_cHW_UCU,0,0,0,0,,,,,,,,, -tWW_cHW_UUG,0,0,0,0,,,,,,,,, -tWW_cSH_ACG,0,0,0,0,,,,,,,,, -tWW_cSH_AGA,0,0,0,0,,,,,,,,, -tWW_cSH_AGC,0,0,0,0,,,,,,,,, -tWW_cSH_AGG,0,0,0,0,,,,,,,,, -tWW_cSH_AGU,0,0,0,0,,,,,,,,, -tWW_cSH_AUG,0,0,0,0,,,,,,,,, -tWW_cSH_CCG,0,0,0,0,,,,,,,,, -tWW_cSH_CUG,0,0,0,0,,,,,,,,, -tWW_cSH_GAA,0,0,0,0,,,,,,,,, -tWW_cSH_GAC,0,0,0,0,,,,,,,,, -tWW_cSH_GAG,0,0,0,0,,,,,,,,, -tWW_cSH_GAU,0,0,0,0,,,,,,,,, -tWW_cSH_GCG,0,0,0,0,,,,,,,,, -tWW_cSH_GUG,0,0,0,0,,,,,,,,, -tWW_cSH_UCG,0,0,0,0,,,,,,,,, -tWW_cSH_UUG,0,0,0,0,,,,,,,,, -tWW_cSS_AGA,0,0,0,0,,,,,,,,, -tWW_cSS_AGC,0,0,0,0,,,,,,,,, -tWW_cSS_AGG,0,0,0,0,,,,,,,,, -tWW_cSS_AGU,0,0,0,0,,,,,,,,, -tWW_cSS_GAA,0,0,0,0,,,,,,,,, -tWW_cSS_GAC,0,0,0,0,,,,,,,,, -tWW_cSS_GAG,0,0,0,0,,,,,,,,, -tWW_cSS_GAU,0,0,0,0,,,,,,,,, -tWW_cSW_AGA,0,0,0,0,,,,,,,,, -tWW_cSW_AGC,0,0,0,0,,,,,,,,, -tWW_cSW_AGG,0,0,0,0,,,,,,,,, -tWW_cSW_AGU,0,0,0,0,,,,,,,,, -tWW_cSW_GAA,0,0,0,0,,,,,,,,, -tWW_cSW_GAC,0,0,0,0,,,,,,,,, -tWW_cSW_GAG,0,0,0,0,,,,,,,,, -tWW_cSW_GAU,0,0,0,0,,,,,,,,, -tWW_tHH_ACC,0,0,0,0,,,,,,,,, -tWW_tHH_AGA,0,0,0,0,,,,,,,,, -tWW_tHH_AGC,0,0,0,0,,,,,,,,, -tWW_tHH_AGG,0,0,0,0,,,,,,,,, -tWW_tHH_AGU,0,0,0,0,,,,,,,,, -tWW_tHH_AUG,0,0,0,0,,,,,,,,, -tWW_tHH_AUU,0,0,0,0,,,,,,,,, -tWW_tHH_CCC,0,0,0,0,,,,,,,,, -tWW_tHH_CGU,0,0,0,0,,,,,,,,, -tWW_tHH_CUG,0,0,0,0,,,,,,,,, -tWW_tHH_CUU,0,0,0,0,,,,,,,,, -tWW_tHH_GAA,0,0,0,0,,,,,,,,, -tWW_tHH_GAC,0,0,0,0,,,,,,,,, -tWW_tHH_GAG,0,0,0,0,,,,,,,,, -tWW_tHH_GAU,0,0,0,0,,,,,,,,, -tWW_tHH_GCC,0,0,0,0,,,,,,,,, -tWW_tHH_GGU,0,0,0,0,,,,,,,,, -tWW_tHH_GUG,0,0,0,0,,,,,,,,, -tWW_tHH_GUU,0,0,0,0,,,,,,,,, -tWW_tHH_UCC,0,0,0,0,,,,,,,,, -tWW_tHH_UGU,0,0,0,0,,,,,,,,, -tWW_tHH_UUG,0,0,0,0,,,,,,,,, -tWW_tHH_UUU,0,0,0,0,,,,,,,,, -tWW_tHS_ACG,0,0,0,0,,,,,,,,, -tWW_tHS_AGA,0,0,0,0,,,,,,,,, -tWW_tHS_AGC,0,0,0,0,,,,,,,,, -tWW_tHS_AGG,0,0,0,0,,,,,,,,, -tWW_tHS_AGU,0,0,0,0,,,,,,,,, -tWW_tHS_AUC,0,0,0,0,,,,,,,,, -tWW_tHS_AUU,0,0,0,0,,,,,,,,, -tWW_tHS_CCG,0,0,0,0,,,,,,,,, -tWW_tHS_CGA,0,0,0,0,,,,,,,,, -tWW_tHS_CGC,0,0,0,0,,,,,,,,, -tWW_tHS_CGU,0,0,0,0,,,,,,,,, -tWW_tHS_CUC,0,0,0,0,,,,,,,,, -tWW_tHS_CUU,0,0,0,0,,,,,,,,, -tWW_tHS_GAA,0,0,0,0,,,,,,,,, -tWW_tHS_GAC,0,0,0,0,,,,,,,,, -tWW_tHS_GAG,0,0,0,0,,,,,,,,, -tWW_tHS_GAU,0,0,0,0,,,,,,,,, -tWW_tHS_GCG,0,0,0,0,,,,,,,,, -tWW_tHS_GGA,0,0,0,0,,,,,,,,, -tWW_tHS_GGC,0,0,0,0,,,,,,,,, -tWW_tHS_GGU,0,0,0,0,,,,,,,,, -tWW_tHS_GUC,0,0,0,0,,,,,,,,, -tWW_tHS_GUU,0,0,0,0,,,,,,,,, -tWW_tHS_UCG,0,0,0,0,,,,,,,,, -tWW_tHS_UGA,0,0,0,0,,,,,,,,, -tWW_tHS_UGC,0,0,0,0,,,,,,,,, -tWW_tHS_UGU,0,0,0,0,,,,,,,,, -tWW_tHS_UUC,0,0,0,0,,,,,,,,, -tWW_tHS_UUU,0,0,0,0,,,,,,,,, -tWW_tHW_AAG,0,0,0,0,,,,,,,,, -tWW_tHW_ACA,0,0,0,0,,,,,,,,, -tWW_tHW_ACG,0,0,0,0,,,,,,,,, -tWW_tHW_ACU,0,0,0,0,,,,,,,,, -tWW_tHW_AGA,0,0,0,0,,,,,,,,, -tWW_tHW_AGC,0,0,0,0,,,,,,,,, -tWW_tHW_AGG,0,0,0,0,,,,,,,,, -tWW_tHW_AGU,0,0,0,0,,,,,,,,, -tWW_tHW_AUA,0,0,0,0,,,,,,,,, -tWW_tHW_AUC,0,0,0,0,,,,,,,,, -tWW_tHW_CAG,0,0,0,0,,,,,,,,, -tWW_tHW_CCA,0,0,0,0,,,,,,,,, -tWW_tHW_CCG,0,0,0,0,,,,,,,,, -tWW_tHW_CCU,0,0,0,0,,,,,,,,, -tWW_tHW_CUA,0,0,0,0,,,,,,,,, -tWW_tHW_CUC,0,0,0,0,,,,,,,,, -tWW_tHW_GAA,0,0,0,0,,,,,,,,, -tWW_tHW_GAC,0,0,0,0,,,,,,,,, -tWW_tHW_GAG,0,0,0,0,,,,,,,,, -tWW_tHW_GAU,0,0,0,0,,,,,,,,, -tWW_tHW_GCA,0,0,0,0,,,,,,,,, -tWW_tHW_GCG,0,0,0,0,,,,,,,,, -tWW_tHW_GCU,0,0,0,0,,,,,,,,, -tWW_tHW_GUA,0,0,0,0,,,,,,,,, -tWW_tHW_GUC,0,0,0,0,,,,,,,,, -tWW_tHW_UAG,0,0,0,0,,,,,,,,, -tWW_tHW_UCA,0,0,0,0,,,,,,,,, -tWW_tHW_UCG,0,0,0,0,,,,,,,,, -tWW_tHW_UCU,0,0,0,0,,,,,,,,, -tWW_tHW_UUA,0,0,0,0,,,,,,,,, -tWW_tHW_UUC,0,0,0,0,,,,,,,,, -tWW_tSH_AAG,0,0,0,0,,,,,,,,, -tWW_tSH_ACG,0,0,0,0,,,,,,,,, -tWW_tSH_ACU,0,0,0,0,,,,,,,,, -tWW_tSH_AGA,0,0,0,0,,,,,,,,, -tWW_tSH_AGC,0,0,0,0,,,,,,,,, -tWW_tSH_AGG,0,0,0,0,,,,,,,,, -tWW_tSH_AGU,0,0,0,0,,,,,,,,, -tWW_tSH_AUG,0,0,0,0,,,,,,,,, -tWW_tSH_AUU,0,0,0,0,,,,,,,,, -tWW_tSH_CAG,0,0,0,0,,,,,,,,, -tWW_tSH_CCG,0,0,0,0,,,,,,,,, -tWW_tSH_CCU,0,0,0,0,,,,,,,,, -tWW_tSH_CGC,0,0,0,0,,,,,,,,, -tWW_tSH_CUG,0,0,0,0,,,,,,,,, -tWW_tSH_CUU,0,0,0,0,,,,,,,,, -tWW_tSH_GAA,0,0,0,0,,,,,,,,, -tWW_tSH_GAC,0,0,0,0,,,,,,,,, -tWW_tSH_GAG,0,0,0,0,,,,,,,,, -tWW_tSH_GAU,0,0,0,0,,,,,,,,, -tWW_tSH_GCG,0,0,0,0,,,,,,,,, -tWW_tSH_GCU,0,0,0,0,,,,,,,,, -tWW_tSH_GGC,0,0,0,0,,,,,,,,, -tWW_tSH_GUG,0,0,0,0,,,,,,,,, -tWW_tSH_GUU,0,0,0,0,,,,,,,,, -tWW_tSH_UAG,0,0,0,0,,,,,,,,, -tWW_tSH_UCG,0,0,0,0,,,,,,,,, -tWW_tSH_UCU,0,0,0,0,,,,,,,,, -tWW_tSH_UGC,0,0,0,0,,,,,,,,, -tWW_tSH_UUG,0,0,0,0,,,,,,,,, -tWW_tSH_UUU,0,0,0,0,,,,,,,,, -tWW_tSW_AAG,0,0,0,0,,,,,,,,, -tWW_tSW_AGA,0,0,0,0,,,,,,,,, -tWW_tSW_AGC,0,0,0,0,,,,,,,,, -tWW_tSW_AGG,0,0,0,0,,,,,,,,, -tWW_tSW_AGU,0,0,0,0,,,,,,,,, -tWW_tSW_CAG,0,0,0,0,,,,,,,,, -tWW_tSW_CGG,0,0,0,0,,,,,,,,, -tWW_tSW_GAA,0,0,0,0,,,,,,,,, -tWW_tSW_GAC,0,0,0,0,,,,,,,,, -tWW_tSW_GAG,0,0,0,0,,,,,,,,, -tWW_tSW_GAU,0,0,0,0,,,,,,,,, -tWW_tSW_GGG,0,0,0,0,,,,,,,,, -tWW_tSW_UAG,0,0,0,0,,,,,,,,, -tWW_tSW_UGG,0,0,0,0,,,,,,,,, -tWW_tSS_AAC,0,0,0,0,,,,,,,,, -tWW_tSS_AAU,0,0,0,0,,,,,,,,, -tWW_tSS_ACC,0,0,0,0,,,,,,,,, -tWW_tSS_ACU,0,0,0,0,,,,,,,,, -tWW_tSS_AGA,0,0,0,0,,,,,,,,, -tWW_tSS_AGC,0,0,0,0,,,,,,,,, -tWW_tSS_AGG,0,0,0,0,,,,,,,,, -tWW_tSS_AGU,0,0,0,0,,,,,,,,, -tWW_tSS_AUC,0,0,0,0,,,,,,,,, -tWW_tSS_AUU,0,0,0,0,,,,,,,,, -tWW_tSS_CAC,0,0,0,0,,,,,,,,, -tWW_tSS_CAU,0,0,0,0,,,,,,,,, -tWW_tSS_CCC,0,0,0,0,,,,,,,,, -tWW_tSS_CCU,0,0,0,0,,,,,,,,, -tWW_tSS_CGC,0,0,0,0,,,,,,,,, -tWW_tSS_CGU,0,0,0,0,,,,,,,,, -tWW_tSS_CUC,0,0,0,0,,,,,,,,, -tWW_tSS_CUU,0,0,0,0,,,,,,,,, -tWW_tSS_GAA,0,0,0,0,,,,,,,,, -tWW_tSS_GAC,0,0,0,0,,,,,,,,, -tWW_tSS_GAG,0,0,0,0,,,,,,,,, -tWW_tSS_GAU,0,0,0,0,,,,,,,,, -tWW_tSS_GCC,0,0,0,0,,,,,,,,, -tWW_tSS_GCU,0,0,0,0,,,,,,,,, -tWW_tSS_GGC,0,0,0,0,,,,,,,,, -tWW_tSS_GGU,0,0,0,0,,,,,,,,, -tWW_tSS_GUC,0,0,0,0,,,,,,,,, -tWW_tSS_GUU,0,0,0,0,,,,,,,,, -tWW_tSS_UAC,0,0,0,0,,,,,,,,, -tWW_tSS_UAU,0,0,0,0,,,,,,,,, -tWW_tSS_UCC,0,0,0,0,,,,,,,,, -tWW_tSS_UCU,0,0,0,0,,,,,,,,, -tWW_tSS_UGC,0,0,0,0,,,,,,,,, -tWW_tSS_UGU,0,0,0,0,,,,,,,,, -tWW_tSS_UUC,0,0,0,0,,,,,,,,, -tWW_tSS_UUU,0,0,0,0,,,,,,,,, -cHW_cHS_AUG_exemplar,,,,,2,2,3,0,0,0,,, -cHW_cHS_GCA_exemplar,,,,,2,4,4,0,0,0,,, -cHW_cHW_GGG_exemplar,,,,,4,4,4,0,0,0,,, -cHW_cHW_UUU_exemplar,,,,,2,2,2,0,0,0,,, -cHW_cSW_AUA_exemplar,,,,,3,4,3,20.2,12.35,0,,, -cHW_tHS_AUA_exemplar,,,,,3,4,3,10.1,12.35,0,,, -cHW_tHW_AUU_exemplar,,,,,4,4,4,0,0,0,,, -cSH_cSS_CAC_exemplar,,,,,1,2,1,132.65,100,0,,, -cSH_cSS_CCA_exemplar,,,,,1,4,5,71.43,87.5,0,,, -cSH_cSS_GUA_exemplar,,,,,1,3,1,0,0,0,,, -cSH_cSS_UCA_exemplar,,,,,1,4,1,0,0,0,,, -cSH_tSH_AGA_exemplar,,,,,2,3,4,9.71,0,0,,, -cSH_tSS_AGA_exemplar,,,,,1,2,2,19.42,0,0,,, -cSW_cHS_CAA_exemplar,,,,,2,4,4,0,0,0,,, -cSW_cHS_CAU_exemplar,,,,,2,4,4,0,0,0,,, -cSW_cHS_CCC_exemplar,,,,,2,3,3,63.16,76.92,0,,, -cSW_cHS_UGA_exemplar,,,,,3,4,5,20,0,0,,, -cSW_cHW_AAU_exemplar,,,,,3,4,4,0,0,0,,, -cSW_cHW_CAU_exemplar,,,,,3,4,4,0,0,0,,, -cSW_cSS_AAC_exemplar,,,,,0,3,2,0,0,0,,, -cSW_cSS_UAC_exemplar,,,,,1,4,2,0,0,0,,, -cSW_cSS_UAG_exemplar,,,,,1,5,3,10.1,0,25,,, -cSW_tHW_AAU_exemplar,,,,,3,5,4,20.2,12.35,0,,, -cSW_tHW_CAU_exemplar,,,,,3,4,4,0,0,0,,, -cSW_tHW_GUU_exemplar,,,,,4,4,4,0,0,0,,, -cSW_tHW_UAC_exemplar,,,,,4,6,4,0,0,0,,, -cSW_tSH_AAA_exemplar,,,,,2,3,2,0,0,23.81,,, -cSW_tSH_AGA_exemplar,,,,,3,5,2,0,0,0,,, -cSW_tSH_CAC_exemplar,,,,,2,4,4,0,0,0,,, -cSW_tSH_CGA_exemplar,,,,,4,7,5,138.61,108.43,0,,, -cSW_tSH_GGA_exemplar,,,,,2,4,3,0,0,0,,, -cSW_tSH_UGA_exemplar,,,,,3,5,4,20,12.2,0,,, -cWH_cSS_UAA_exemplar,,,,,2,5,2,10.2,0,0,,, -cWH_cSS_UAC_exemplar,,,,,2,7,2,0,0,54.05,,, -cWH_cSS_UAG_exemplar,,,,,2,4,3,10.1,0,50,,, -cWH_tSS_GAG_exemplar,,,,,3,4,4,9.62,11.63,0,,, -cWH_tSS_GGA_exemplar,,,,,3,4,3,9.62,0,0,,, -cWH_tSS_UAA_exemplar,,,,,2,4,3,0,0,0,,, -cWH_tSS_UAC_exemplar,,,,,2,3,3,0,0,54.05,,, -cWH_tSS_UAG_exemplar,,,,,3,4,4,10,12.2,0,,, -cWH_tSS_UGA_exemplar,,,,,2,3,1,10,0,0,,, -cWH_tSW_GGA_exemplar,,,,,5,6,5,0,0,0,,, -cWW_cHH_CGG_exemplar,,,,,3,3,5,39.22,0,0,,, -cWW_cHH_UGC_exemplar,,,,,2,2,3,10.2,12.5,0,,, -cWW_cHS_AUG_exemplar,,,,,2,2,3,0,0,0,,, -cWW_cHS_CGA_exemplar,,,,,4,4,5,10,0,0,,, -cWW_cHS_CGG_exemplar,,,,,4,4,4,0,0,0,,, -cWW_cHS_GCA_exemplar,,,,,4,4,5,0,0,0,,, -cWW_cHS_GCC_exemplar,,,,,4,4,6,171.72,74.07,0,,, -cWW_cHS_GCG_exemplar,,,,,6,7,5,0,0,0,,, -cWW_cHS_GCU_exemplar,,,,,4,4,4,0,0,0,,, -cWW_cHS_UAA_exemplar,,,,,3,4,6,0,0,0,,, -cWW_cHS_UAU_exemplar,,,,,3,3,4,0,0,0,,, -cWW_cHS_UCU_exemplar,,,,,3,3,2,0,0,0,,, -cWW_cHS_UGG_exemplar,,,,,4,4,6,0,0,0,,, -cWW_cHS_UUG_exemplar,,,,,4,4,3,0,0,0,,, -cWW_cHS_UUU_exemplar,,,,,2,2,2,0,0,0,,, -cWW_cHW_AGG_exemplar,,,,,5,5,5,0,0,22.73,,, -cWW_cHW_AUU_exemplar,,,,,3,3,4,0,0,0,,, -cWW_cHW_CAU_exemplar,,,,,2,3,3,0,0,0,,, -cWW_cHW_CGC_exemplar,,,,,3,3,5,0,0,0,,, -cWW_cHW_CGG_exemplar,,,,,6,6,6,0,0,23.81,,, -cWW_cHW_CGU_exemplar,,,,,0,5,4,51.02,0,0,,, -cWW_cHW_GAU_exemplar,,,,,5,6,4,10,0,0,,, -cWW_cHW_GCC_exemplar,,,,,6,6,4,0,0,0,,, -cWW_cHW_UAU_exemplar,,,,,4,4,4,10.42,0,0,,, -cWW_cSH_AUA_exemplar,,,,,3,4,3,20.2,12.35,0,,, -cWW_cSH_AUC_exemplar,,,,,3,3,3,20.62,12.66,0,,, -cWW_cSH_CAA_exemplar,,,,,4,4,4,30,12.2,0,,, -cWW_cSH_CGA_exemplar,,,,,4,4,6,158.42,132.53,48.78,,, -cWW_cSH_CGG_exemplar,,,,,4,4,6,9.8,0,0,,, -cWW_cSH_CGU_exemplar,,,,,4,4,4,0,0,0,,, -cWW_cSH_GCC_exemplar,,,,,3,3,2,31.58,38.96,0,,, -cWW_cSH_GCU_exemplar,,,,,5,6,5,142.86,112.5,0,,, -cWW_cSH_UAA_exemplar,,,,,2,3,5,30.3,12.35,0,,, -cWW_cSH_UAG_exemplar,,,,,3,4,2,0,0,0,,, -cWW_cSH_UUC_exemplar,,,,,4,4,3,53.19,52.63,0,,, -cWW_cSS_AGA_exemplar,,,,,4,6,4,0,0,23.26,,, -cWW_cSS_AUA_exemplar,,,,,2,4,4,20.2,12.35,0,,, -cWW_cSS_AUC_exemplar,,,,,2,4,3,10.31,12.66,0,,, -cWW_cSS_AUG_exemplar,,,,,3,0,3,20,12.2,0,,, -cWW_cSS_CGA_exemplar,,,,,4,5,5,0,0,0,,, -cWW_cSS_CGC_exemplar,,,,,4,7,4,0,0,0,,, -cWW_cSS_CGG_exemplar,,,,,4,6,6,0,0,0,,, -cWW_cSS_CGU_exemplar,,,,,3,6,3,0,0,0,,, -cWW_cSS_GAA_exemplar,,,,,2,5,2,9.8,0,0,,, -cWW_cSS_GAC_exemplar,,,,,3,6,2,0,0,0,,, -cWW_cSS_GCA_exemplar,,,,,5,9,5,0,0,0,,, -cWW_cSS_GCG_exemplar,,,,,5,7,5,0,0,0,,, -cWW_cSS_GCU_exemplar,,,,,3,5,5,0,0,0,,, -cWW_cSS_GUA_exemplar,,,,,3,6,6,50,48.78,0,,, -cWW_cSS_UAA_exemplar,,,,,2,5,2,10.2,0,0,,, -cWW_cSS_UAC_exemplar,,,,,2,5,2,0,0,0,,, -cWW_cSS_UAG_exemplar,,,,,3,6,3,10.1,0,0,,, -cWW_cSS_UAU_exemplar,,,,,3,6,5,0,0,0,,, -cWW_cSS_UGA_exemplar,,,,,2,5,5,0,0,0,,, -cWW_cSS_UGC_exemplar,,,,,3,5,5,0,0,0,,, -cWW_cSS_UGG_exemplar,,,,,4,9,6,0,0,0,,, -cWW_cSS_UGU_exemplar,,,,,2,4,3,0,0,0,,, -cWW_cSS_UUA_exemplar,,,,,2,5,4,20.83,12.82,0,,, -cWW_cSS_UUG_exemplar,,,,,2,6,6,30.93,25.32,0,,, -cWW_cSW_AUA_exemplar,,,,,3,4,3,20.2,12.35,0,,, -cWW_cSW_AUC_exemplar,,,,,3,4,3,20.62,12.66,0,,, -cWW_cSW_AUG_exemplar,,,,,3,4,5,20,12.2,0,,, -cWW_cSW_AUU_exemplar,,,,,3,3,4,20.83,25.64,0,,, -cWW_cSW_CGA_exemplar,,,,,4,4,3,0,0,48.78,,, -cWW_cSW_CGC_exemplar,,,,,4,6,4,0,0,0,,, -cWW_cSW_CGG_exemplar,,,,,4,6,4,0,0,0,,, -cWW_cSW_CGU_exemplar,,,,,5,7,5,10.2,12.5,52.63,,, -cWW_cSW_CUA_exemplar,,,,,2,6,2,20.62,12.66,0,,, -cWW_cSW_GCA_exemplar,,,,,4,5,4,128.71,108.43,0,,, -cWW_cSW_GCC_exemplar,,,,,4,5,4,131.31,111.11,0,,, -cWW_cSW_GCU_exemplar,,,,,3,4,5,61.22,75,0,,, -cWW_cSW_UAA_exemplar,,,,,3,4,3,0,0,0,,, -cWW_cSW_UAC_exemplar,,,,,3,5,3,0,0,0,,, -cWW_cSW_UAU_exemplar,,,,,3,4,4,0,0,0,,, -cWW_tHH_AUA_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tHH_CGC_exemplar,,,,,5,5,4,0,0,25.64,,, -cWW_tHH_GCA_exemplar,,,,,5,5,5,0,0,0,,, -cWW_tHH_GCG_exemplar,,,,,4,4,6,0,0,0,,, -cWW_tHH_GCU_exemplar,,,,,4,5,5,0,0,0,,, -cWW_tHH_UAA_exemplar,,,,,4,4,5,0,0,0,,, -cWW_tHS_AUA_exemplar,,,,,3,3,3,0,0,0,,, -cWW_tHS_AUG_exemplar,,,,,3,5,3,0,0,0,,, -cWW_tHS_CGG_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tHS_GCC_exemplar,,,,,4,5,5,131.31,111.11,0,,, -cWW_tHS_GUA_exemplar,,,,,3,3,3,0,0,0,,, -cWW_tHS_UAG_exemplar,,,,,4,5,5,0,0,0,,, -cWW_tHS_UAU_exemplar,,,,,3,4,5,83.33,89.74,0,,, -cWW_tHS_UCC_exemplar,,,,,3,6,4,0,0,0,,, -cWW_tHW_AUG_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tHW_CAC_exemplar,,,,,5,5,4,142.86,125,26.32,,, -cWW_tHW_CGA_exemplar,,,,,4,4,4,0,0,24.39,,, -cWW_tHW_CGC_exemplar,,,,,5,5,5,0,0,0,,, -cWW_tHW_CGG_exemplar,,,,,6,6,7,0,0,0,,, -cWW_tHW_CUU_exemplar,,,,,3,3,3,10.64,13.16,0,,, -cWW_tHW_GCC_exemplar,,,,,5,5,5,0,0,0,,, -cWW_tHW_UAA_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tHW_UAC_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tHW_UAU_exemplar,,,,,4,4,4,10.42,0,0,,, -cWW_tHW_UGA_exemplar,,,,,4,4,4,10,12.2,0,,, -cWW_tHW_UGG_exemplar,,,,,3,3,6,0,0,0,,, -cWW_tHW_UGU_exemplar,,,,,3,4,5,0,0,0,,, -cWW_tSH_AGG_exemplar,,,,,5,5,3,0,0,0,,, -cWW_tSH_AUA_exemplar,,,,,3,3,3,50.51,49.38,0,,, -cWW_tSH_CGA_exemplar,,,,,5,6,5,0,0,0,,, -cWW_tSH_CGG_exemplar,,,,,4,4,5,137.25,107.14,0,,, -cWW_tSH_CGU_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tSH_GCA_exemplar,,,,,5,7,5,9.9,12.05,24.39,,, -cWW_tSH_UAA_exemplar,,,,,3,5,3,20.2,12.35,0,,, -cWW_tSH_UGA_exemplar,,,,,4,5,5,0,0,0,,, -cWW_tSH_UGU_exemplar,,,,,3,4,4,0,0,0,,, -cWW_tSS_AGA_exemplar,,,,,3,5,3,0,11.76,0,,, -cWW_tSS_AGG_exemplar,,,,,4,5,4,0,0,0,,, -cWW_tSS_AUA_exemplar,,,,,2,3,3,0,12.35,0,,, -cWW_tSS_CGA_exemplar,,,,,4,7,5,0,12.05,0,,, -cWW_tSS_CGG_exemplar,,,,,5,6,7,132.65,0,0,,, -cWW_tSS_CUA_exemplar,,,,,2,3,2,10.1,12.66,0,,, -cWW_tSS_GAA_exemplar,,,,,1,2,3,0,0,23.26,,, -cWW_tSS_GCA_exemplar,,,,,4,6,4,0,108.43,0,,, -cWW_tSS_GCG_exemplar,,,,,5,7,7,0,107.14,0,,, -cWW_tSS_UAA_exemplar,,,,,2,6,3,0,0,0,,, -cWW_tSS_UGA_exemplar,,,,,3,4,4,0,12.2,0,,, -cWW_tSS_UGG_exemplar,,,,,4,6,5,29.41,0,0,,, -cWW_tSS_UUA_exemplar,,,,,2,4,2,101.01,51.95,0,,, -cWW_tSW_AGA_exemplar,,,,,4,4,4,0,0,0,,, -cWW_tSW_AUA_exemplar,,,,,3,4,3,0,0,0,,, -cWW_tSW_CGA_exemplar,,,,,6,7,6,0,0,0,,, -cWW_tSW_CGC_exemplar,,,,,6,6,6,0,0,0,,, -cWW_tSW_CGU_exemplar,,,,,4,6,4,0,12.5,0,,, -cWW_tSW_GCC_exemplar,,,,,6,6,5,0,0,0,,, -cWW_tSW_GCG_exemplar,,,,,4,4,6,41.24,35.71,0,,, -cWW_tSW_UAU_exemplar,,,,,3,5,3,30,0,0,,, -cWW_tSW_UGA_exemplar,,,,,5,6,6,132.65,0,0,,, -cWW_tSW_UGC_exemplar,,,,,5,6,6,10,12.5,0,,, -tHH_cSS_AAA_exemplar,,,,,2,5,3,9.9,0,0,,, -tHH_cSS_AAC_exemplar,,,,,2,4,3,0,0,25,,, -tHH_cSS_AAG_exemplar,,,,,2,3,4,9.8,0,0,,, -tHH_cSS_AAU_exemplar,,,,,2,5,7,0,0,0,,, -tHH_cSS_UAC_exemplar,,,,,1,5,2,0,0,0,,, -tHH_cSW_AAA_exemplar,,,,,3,4,5,9.8,0,0,,, -tHH_cSW_AAU_exemplar,,,,,3,6,6,0,0,0,,, -tHH_tSH_AAA_exemplar,,,,,3,4,4,0,0,23.81,,, -tHH_tSS_AAC_exemplar,,,,,2,3,5,0,0,0,,, -tHH_tSS_AAG_exemplar,,,,,3,4,6,9.71,11.76,0,,, -tHH_tSS_AGG_exemplar,,,,,3,5,4,0,0,0,,, -tHH_tSS_GCA_exemplar,,,,,1,2,2,0,0,0,,, -tHH_tSS_GGG_exemplar,,,,,2,4,6,0,0,0,,, -tHW_cHS_AUG_exemplar,,,,,3,0,4,30,0,0,,, -tHW_cHW_AUU_exemplar,,,,,3,3,3,0,0,0,,, -tHW_cSH_ACC_exemplar,,,,,4,4,4,71.43,87.5,0,,, -tHW_cSH_AUU_exemplar,,,,,3,3,2,31.25,25.64,0,,, -tHW_cSH_UUC_exemplar,,,,,3,3,2,21.28,13.16,0,,, -tHW_cSS_AAC_exemplar,,,,,2,4,2,0,0,0,,, -tHW_cSS_AAG_exemplar,,,,,2,4,3,9.8,0,0,,, -tHW_cSS_AAU_exemplar,,,,,2,5,5,0,0,0,,, -tHW_cSS_ACA_exemplar,,,,,1,3,4,0,0,0,,, -tHW_cSS_AUA_exemplar,,,,,3,5,5,20.2,12.35,25.64,,, -tHW_cSS_AUG_exemplar,,,,,2,5,4,60,60.98,0,,, -tHW_cSS_CCG_exemplar,,,,,3,8,3,0,0,0,,, -tHW_cSS_GAU_exemplar,,,,,1,4,3,0,0,0,,, -tHW_cSS_GGU_exemplar,,,,,3,6,3,0,0,0,,, -tHW_cSW_AUA_exemplar,,,,,2,2,3,60.61,61.73,0,,, -tHW_cSW_AUC_exemplar,,,,,3,5,3,30.93,25.32,0,,, -tHW_tHS_GGG_exemplar,,,,,4,4,5,0,0,0,,, -tHW_tHW_AAA_exemplar,,,,,3,3,4,0,0,0,,, -tHW_tHW_ACC_exemplar,,,,,3,3,3,10.2,12.5,0,,, -tHW_tSH_AAA_exemplar,,,,,3,4,3,0,0,0,,, -tHW_tSH_GGA_exemplar,,,,,4,6,5,0,0,0,,, -tHW_tSS_AUA_exemplar,,,,,3,4,5,10.2,12.35,0,,, -tHW_tSW_ACC_exemplar,,,,,5,5,3,0,0,26.32,,, -tHW_tSW_ACU_exemplar,,,,,4,6,4,0,0,0,,, -tHW_tSW_AUA_exemplar,,,,,3,4,4,19.8,12.35,0,,, -tSH_cSS_AAC_exemplar,,,,,1,4,2,0,0,0,,, -tSH_cSS_AAG_exemplar,,,,,1,5,3,9.8,0,0,,, -tSH_cSS_CAG_exemplar,,,,,2,3,3,10,0,0,,, -tSH_cSS_GAA_exemplar,,,,,2,6,3,9.8,0,0,,, -tSH_cSS_GAC_exemplar,,,,,2,5,3,0,0,0,,, -tSH_cSS_GAG_exemplar,,,,,3,5,4,9.71,0,0,,, -tSH_cSS_GAU_exemplar,,,,,2,4,5,0,0,0,,, -tSH_cSS_UAC_exemplar,,,,,0,3,2,31.25,38.46,0,,, -tSH_cSW_GAU_exemplar,,,,,2,3,5,0,0,0,,, -tSH_cSW_UAC_exemplar,,,,,2,4,3,30.93,37.97,27.03,,, -tSH_tSS_AAG_exemplar,,,,,2,4,5,9.71,11.76,0,,, -tSH_tSS_CAG_exemplar,,,,,2,4,4,9.9,12.05,0,,, -tSH_tSS_CAU_exemplar,,,,,1,3,3,0,0,0,,, -tSH_tSS_GAA_exemplar,,,,,2,4,4,0,0,0,,, -tSH_tSS_GAC_exemplar,,,,,2,5,4,0,0,0,,, -tSH_tSS_GAG_exemplar,,,,,3,5,5,9.62,11.63,0,,, -tSH_tSS_GAU_exemplar,,,,,2,4,4,0,0,100,,, -tSH_tSS_UAG_exemplar,,,,,1,3,5,50,60.98,0,,, -tSW_cSH_GAC_exemplar,,,,,2,2,3,0,0,0,,, -tSW_cSS_AUC_exemplar,,,,,1,4,3,0,0,0,,, -tSW_cSS_GUC_exemplar,,,,,4,6,6,0,0,0,,, -tSW_cSW_CUA_exemplar,,,,,4,6,4,20.62,12.66,0,,, -tSW_cSW_GAA_exemplar,,,,,3,4,3,0,0,23.26,,, -tSW_tHS_GAU_exemplar,,,,,2,5,5,61.22,62.5,0,,, -tSW_tHS_GUG_exemplar,,,,,2,3,2,0,0,0,,, -tSW_tHW_GAA_exemplar,,,,,4,4,4,205.88,190.48,0,,, -tSW_tHW_GAU_exemplar,,,,,4,5,6,60,60.98,0,,, -tSW_tHW_GCC_exemplar,,,,,4,6,6,10.1,12.35,0,,, -tSW_tSS_GAA_exemplar,,,,,0,0,3,0,0,0,,, -tSW_tSW_GAU_exemplar,,,,,3,5,4,0,0,0,,, -tWH_cSH_AAC_exemplar,,,,,3,3,3,0,0,0,,, -tWH_cSH_UAC_exemplar,,,,,3,5,3,0,0,0,,, -tWH_cSS_AAA_exemplar,,,,,2,3,2,9.9,0,0,,, -tWH_cSS_AAC_exemplar,,,,,2,4,2,0,0,0,,, -tWH_cSS_AAG_exemplar,,,,,3,4,3,9.8,0,0,,, -tWH_cSS_CAC_exemplar,,,,,3,5,2,0,0,26.32,,, -tWH_cSS_CAU_exemplar,,,,,3,5,4,0,0,0,,, -tWH_cSS_UAA_exemplar,,,,,2,5,2,10.2,0,0,,, -tWH_cSS_UAC_exemplar,,,,,2,5,2,0,0,0,,, -tWH_cSS_UAG_exemplar,,,,,3,6,3,10.1,0,0,,, -tWH_cSS_UAU_exemplar,,,,,2,5,5,0,0,0,,, -tWH_cSW_UAA_exemplar,,,,,3,5,3,0,0,0,,, -tWH_tSS_AAC_exemplar,,,,,2,3,3,0,0,0,,, -tWH_tSS_AAG_exemplar,,,,,3,4,4,9.71,11.76,0,,, -tWH_tSS_AAU_exemplar,,,,,2,4,3,0,0,0,,, -tWH_tSS_CAC_exemplar,,,,,2,4,3,0,0,0,,, -tWH_tSS_CAG_exemplar,,,,,3,4,4,9.9,12.05,0,,, -tWH_tSS_UAA_exemplar,,,,,2,2,3,0,0,0,,, -tWH_tSS_UAC_exemplar,,,,,2,3,3,0,0,0,,, -tWH_tSS_UAG_exemplar,,,,,3,5,4,10,12.2,0,,, -tWH_tSS_UAU_exemplar,,,,,2,3,3,0,0,27.78,,, -tWH_tSW_CGA_exemplar,,,,,3,3,4,0,0,0,,, -tWH_tSW_GGA_exemplar,,,,,5,6,6,0,0,0,,, -tWW_cHH_CAG_exemplar,,,,,5,7,5,128.71,108.43,0,,, -tWW_cHS_AAA_exemplar,,,,,3,4,5,29.41,0,0,,, -tWW_cSS_AAA_exemplar,,,,,2,5,2,9.9,0,0,,, -tWW_cSS_AAC_exemplar,,,,,2,3,2,0,0,0,,, -tWW_cSS_AAG_exemplar,,,,,2,5,3,9.8,0,0,,, -tWW_cSS_AAU_exemplar,,,,,2,4,4,0,0,0,,, -tWW_cSS_AUA_exemplar,,,,,2,4,4,20.2,12.35,0,,, -tWW_cSS_CGA_exemplar,,,,,3,5,5,0,0,0,,, -tWW_cSS_CGC_exemplar,,,,,3,4,4,0,0,0,,, -tWW_cSS_GCG_exemplar,,,,,4,7,4,29.41,35.71,0,,, -tWW_cSS_UAU_exemplar,,,,,2,3,4,0,0,0,,, -tWW_cSW_AAC_exemplar,,,,,3,5,4,0,0,25,,, -tWW_cSW_AUA_exemplar,,,,,3,4,3,20.2,12.35,0,,, -tWW_tHH_AAA_exemplar,,,,,4,4,5,0,0,0,,, -tWW_tHH_GCA_exemplar,,,,,3,5,5,0,12.05,0,,, -tWW_tHS_AAG_exemplar,,,,,4,4,3,194.17,211.76,0,,, -tWW_tHS_AAU_exemplar,,,,,3,5,4,61.22,62.5,0,,, -tWW_tHS_CGG_exemplar,,,,,5,5,3,0,0,0,,, -tWW_tHS_GUA_exemplar,,,,,3,4,5,70,85.37,0,,, -tWW_tHS_UAG_exemplar,,,,,4,6,8,70,60.98,0,,, -tWW_tHS_UAU_exemplar,,,,,3,5,7,156.25,153.85,0,,, -tWW_tHW_AAC_exemplar,,,,,3,3,4,0,0,0,,, -tWW_tHW_AAU_exemplar,,,,,4,4,4,0,0,0,,, -tWW_tHW_UAU_exemplar,,,,,4,5,4,10.42,0,0,,, -tWW_tSH_AAA_exemplar,,,,,3,4,3,0,0,0,,, -tWW_tSS_GGA_exemplar,,,,,3,4,5,132.65,11.63,0,,, -tWW_tSW_CGC_exemplar,,,,,5,7,7,0,0,0,,, \ No newline at end of file diff --git a/rna_tools/tools/triplexibility/triplexibility.py b/rna_tools/tools/triplexibility/triplexibility.py deleted file mode 100755 index 93aa33dd3..000000000 --- a/rna_tools/tools/triplexibility/triplexibility.py +++ /dev/null @@ -1,411 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- - -""" -Examples:: - - triplexibility.py -t 2nd_triplex_FB_ABC.pdb triples-all-v2-rpr/*.pdb --way backbone+sugar --save --suffix ABC --result abc.csv - - triplexibility.py -t 2nd_triplex_FB_1AUA3_rpr.pdb test_data/triples2/Triple_cWW_tSH_GCA_exemplar_rpr_ren.pdb --way backbone+sugar --save --column-name 'rmsd' --triple-mode > out.txt - -""" -from __future__ import print_function - -import Bio.PDB.PDBParser -import Bio.PDB.Superimposer -import copy -import warnings -warnings.filterwarnings('ignore', '.*Invalid or missing.*',) -warnings.filterwarnings('ignore', '.*with given element *',) -warnings.filterwarnings('ignore', '.*is discontinuous*',) -warnings.filterwarnings('ignore', '.*Ignoring unrecognized record*',) - -import sys -from icecream import ic -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -from rna_tools.rna_tools_lib import set_chain_for_struc, RNAStructure -from rna_tools.rna_tools_config import RT - -import argparse -import sys -import glob -import re -import os - -class RNAmodel: - def __init__(self, fpath): - # parser 1-5 -> 1 2 3 4 5 - self.struc = Bio.PDB.PDBParser().get_structure('', fpath) - self.__get_atoms() - self.fpath = fpath - self.fn = os.path.basename(fpath) - # self.atoms = [] - # if save: - # self.save() # @save - - def __get_atoms(self): - self.atoms=[] - # [, , , , , , , , , , , , , , , , , , , , , ] - for res in self.struc.get_residues(): - for at in res: - #if args.debug: print(res.resname, res.get_id, at) - self.atoms.append(at) - return self.atoms - - def __str__(self): - return self.fn #+ ' # beads' + str(len(self.residues)) - - def __repr__(self): - return self.fn #+ ' # beads' + str(len(self.residues)) - - def get_report(self): - """Str a short report about rna model""" - t = ' '.join(['File: ', self.fn, ' # of atoms:', str(len(self.atoms)), '\n']) - for r,a in zip(self.residues, self.atoms ): - t += ' '.join(['resi: ', str(r) ,' atom: ', str(a) , '\n' ]) - return t - - def get_rmsd_to(self, other_rnamodel, way="", triple_mode=False, save=True, tseq=''): - """Calc rmsd P-atom based rmsd to other rna model - - sugar now 10 atoms ;-) """ - sup = Bio.PDB.Superimposer() - if way in ['c1', 'backbone+sugar', 'sugar']: - if way == 'c1': - atomslist = ["C1'"]# ,"C2'","O4'"] #, "C2'"] - - elif way == 'sugar': - atomslist = "C5',O5',C4',O4',C3',O3',C2',O2',C1'".split(',') - - elif way == 'backbone+sugar': - atomslist = "P,OP1,OP2,C5',O5',C4',O4',C3',O3',C2',O2',C1'".split(',') - - self.atoms_for_rmsd = [] - for a in self.atoms: - nt = a.get_parent().get_resname().strip() - if nt in ['G', 'A']: - atomslistx = atomslist + ['N9'] - if nt in ['C', 'U']: - atomslistx = atomslist + ['N1'] - if a.name in atomslistx: - self.atoms_for_rmsd.append(a) - if args.debug: print('atoms_for_rmsd', len(self.atoms_for_rmsd)) - - other_atoms_for_rmsd = [] - for a in other_rnamodel.atoms: - nt = a.get_parent().get_resname().strip() - if nt in ['G', 'A']: - atomslistx = atomslist + ['N9'] - if nt in ['C', 'U']: - atomslistx = atomslist + ['N1'] - if a.name in atomslistx: - other_atoms_for_rmsd.append(a) - - if args.debug: print('other_atoms_for_rmsd', len(other_atoms_for_rmsd)) - - elif way == 'c1+Nx': - self.atoms_for_rmsd = [] - for a in self.atoms: - nt = a.get_parent().get_resname().strip() # G - if nt in ['G', 'A']: - atomslist = ["C1'", 'N9'] # , 'N1'] - if nt in ['C', 'U']: - atomslist = ["C1'", 'N1'] # , 'N1'] - if a.name in atomslist: - self.atoms_for_rmsd.append(a) - - if args.debug: print('atoms_for_rmsd', len(self.atoms_for_rmsd)) - - other_atoms_for_rmsd = [] - for a in other_rnamodel.atoms: - nt = a.get_parent().get_resname().strip() # G - if nt in ['G', 'A']: - atomslist = ["C1'", 'N9'] # , 'N1'] - if nt in ['C', 'U']: - atomslist = ["C1'", 'N1'] # , 'N1'] - if a.name in atomslist: - other_atoms_for_rmsd.append(a) - if args.debug: print('other_atoms_for_rmsd', len(other_atoms_for_rmsd)) - - else: - self.atoms_for_rmsd = self.atoms - other_atoms_for_rmsd = other_rnamodel.atoms - - # calc rmsd # - if not tseq: - tseq = '' - rt = None - for a in self.atoms_for_rmsd: - r = a.get_parent() - if r != rt: - rt = r - tseq += r.get_resname().strip() - - if triple_mode: - def chunks(lst, n): - """Yield successive n-sized chunks from lst. - https://stackoverflow.com/questions/312443/how-do-you-split-a-list-into-evenly-sized-chunks - """ - for i in range(0, len(lst), n): - yield lst[i:i + n] - - rmsd_min = 10000 # ugly - import itertools - # ok, for different residues now it's a problem - per = list(itertools.permutations([0, 1, 2])) # [(0, 1, 2), (0, 2, 1), (1, 0, 2), (1, 2, 0), (2, 0, 1), (2, 1, 0)] - lst = list(chunks(other_atoms_for_rmsd, - int(len(other_atoms_for_rmsd)/3))) # for 1 atom, this will be 1 x 3 [3 residues] - # so so len is 3 atoms so / by 3 to get how many atoms per residue - print(lst) - - sup_min = None - seq_min = 'not yet obtained, rmsd rejected!' - p_min = None - - rms = -1 - - for p in per: - patoms = [] - for i in p: # p=(1, 2, 3) - patoms.extend(lst[i]) - - #print(self.atoms_for_rmsd) - ## print('patoms') - ## for a in patoms: - ## print(a, a.get_parent().get_id()) - ## print('self.atoms_for_rmsd') - ## for a in self.atoms_for_rmsd: - ## print(a, a.get_parent().get_id()) - #sup.set_atoms(patoms, self.atoms_for_rmsd) - - rt = None - seq = '' - for a in patoms: - r = a.get_parent() - if r != rt: - rt = r - seq += r.get_resname().strip() - - ic(tseq.lower(), seq.lower(), other_rnamodel.fpath) - # dont' even calc rmsd if the curr seq and tseq are not the same - if tseq.lower() == seq.lower(): # only if seq is the same - print(self.atoms_for_rmsd) - print(patoms) - print(len(self.atoms_for_rmsd), len(patoms)) - for a, b in zip(self.atoms_for_rmsd, patoms): - print(a, a.get_parent().id, a.get_parent().get_resname(), - b.get_parent().id, b.get_parent().get_resname()) - print(len(self.atoms_for_rmsd), len(patoms)) - try: - sup.set_atoms(self.atoms_for_rmsd, patoms) - except: - pass - rms = round(sup.rms, 2) - if rms < rmsd_min: - rmsd_min = rms - sup_min = copy.copy(sup) - suffix = seq - p_min = p - seq_min = seq - if args.debug: 'set new rmsd_min', rmsd_min - - if args.debug: - print(p, '', [i + 1 for i in p], end=' ') - print(seq, 'seq_min: ' + seq_min, rms) - - if p_min: # found target sequence - # what is this? ;-) - index = [0 ,0 ,0] - index[0] = p_min.index(0) - index[1] = p_min.index(1) - index[2] = p_min.index(2) - - # ugly re-set 123 to crazy id ! + 100, so this will - # fill up 1 2 3 for the second for - rs = other_rnamodel.struc[0].get_residues() - for i, r in enumerate(rs): - r.id = (' ', index[i] + 253, ' ') # ugly, some random offset - - for i, r in enumerate(other_rnamodel.struc[0].get_residues()): - r.id = (' ', index[i] + 1, ' ') - if args.debug: print('r', r) - - io = Bio.PDB.PDBIO() - sup_min.apply(other_rnamodel.struc.get_atoms()) - # if args.debug: print(p_min, [i + 1 for i in p_min]) - io.set_structure(other_rnamodel.struc) - - args.save_here = True - if args.save_here and save: - folder = os.path.basename(self.fpath.replace('.pdb', '_' + args.folder_prefix + '_aligned')) - # print(f) - try: - os.mkdir(folder) - except: - pass - fout = folder + os.sep + "{:1.2f}".format(rmsd_min) + '-' + os.path.basename(other_rnamodel.fpath)#.replace('.pdb', '-' + str(rms) + '.pdb')) - #_s' + suffix + '.pdb')) - else: - fout = other_rnamodel.fpath.replace('.pdb', '_aligned.pdb')#_s' + suffix + '.pdb') - - if args.debug: print(fout) - - if save: - io.save(fout) - # ugly set chain to A - set_chain_for_struc(fout, 'A', save_file_inplace=True) - # and now run this to sort into 1 2 3 - - r = RNAStructure(fout) - remarks = r.get_remarks_text() - r1 = r.get_res_text('A', 1) - r2 = r.get_res_text('A', 2) - r3 = r.get_res_text('A', 3) - with open(fout, 'w') as f: - f.write(remarks) - f.write(r1) - f.write(r2) - f.write(r3) - r.reload() - r.get_rnapuzzle_ready() - if rmsd_min < 1: # !!!!!!!!!!!! ugly - r.write() - return str(rmsd_min)# + ',s' + seq_min + ',' + os.path.basename(fout) - else: - # check if number of the same atoms # - # if not the same then return -1 # - # print(len(self.atoms_for_rmsd), len(other_atoms_for_rmsd)) - if len(self.atoms_for_rmsd) != len(other_atoms_for_rmsd): - return -1 - sup.set_atoms(self.atoms_for_rmsd, other_atoms_for_rmsd) - rms = round(sup.rms, 2) - - if save: - ## io = Bio.PDB.PDBIO() - ## sup.apply(self.struc.get_atoms()) - ## io.set_structure(self.struc) - ## io.save("aligned.pdb") - - io = Bio.PDB.PDBIO() - sup.apply(other_rnamodel.struc.get_atoms()) - io.set_structure(other_rnamodel.struc) - - args.save_here = True - if args.save_here and save: - f = os.path.basename(self.fpath.replace('.pdb', '_aligned')) - # print(f) - try: - os.mkdir(f) - except: - pass - # fout = f + os.sep + os.path.basename(other_rnamodel.fpath.replace('.pdb', '_aligned_s' + suffix + '.pdb')) - fout = f + os.sep + os.path.basename(other_rnamodel.fpath)#.replace('.pdb', '_aligned')) - else: - fout = other_rnamodel.fpath.replace('.pdb', '_aligned.pdb') - if save: - io.save(fout) - return rms - - -def get_rna_models_from_dir(directory): - models = [] - if not os.path.exists(directory): - raise Exception('Dir does not exist! ', directory) - files = glob.glob(directory + "/*.pdb") - files_sorted = sort_nicely(files) - for f in files_sorted: - #print f - models.append(RNAmodel(f)) - return models - -def sort_nicely( l ): - """ Sort the given list in the way that humans expect. - - http://blog.codinghorror.com/sorting-for-humans-natural-sort-order/ - """ - convert = lambda text: int(text) if text.isdigit() else text - alphanum_key = lambda key: [ convert(c) for c in re.split('([0-9]+)', key) ] - l.sort( key=alphanum_key ) - return l - - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - parser.add_argument('-t',"--target", - help="target file") - parser.add_argument('--result', #default='out.rmsd', - help="result file") - parser.add_argument('--ignore-files', default='aligned', help="use to ignore files, .e.g. with 'aligned'") - parser.add_argument('--suffix', default='aligned', help="used with --saved, by default: aligned") - parser.add_argument('--way', help="e.g., backbone+sugar, c1, c1+Nx") - parser.add_argument('--triple-mode', help="same crazy strategy to align triples", default=True, action="store_true") - parser.add_argument('--column-name', help="name column for rmsd, by default 'rmsd', but can also be a name of the target file", default="rmsd") - parser.add_argument("-s", "--save", action="store_true", help="set suffix with --suffix, by default: aligned") - parser.add_argument("--folder-prefix", default = '', help="folder name, t2-3-UAU_NAME_aligned") - - parser.add_argument("--debug", action="store_true") - parser.add_argument("--sort", action="store_true", help='sort results based on rmsd (ascending), --result must be set up') - parser.add_argument("--tseq", help='target sequence, e.g. acu, find only triples of this sequence [use the order for the seq taken from the input PDB file, literally order of residues in a pdb file]') - parser.add_argument('--files', help='files', nargs='+', default=RT + '/rna_tools/tools/triplexibility/db/triples-all-v2-rpr/*.pdb') - return parser - -# main -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - if not args.debug: - ic.disable() - - target = RNAmodel(args.target) - - # a trick to get files be default if there is only a path (so a string ;-)) - if not isinstance(args.files, str): - models = args.files - else: - import glob - models = glob.glob(args.files) # opts.input_dir - - ## tmp = [] - ## if args.ignore_files: - ## for f in args.files: - ## if args.debug: print(f) - ## if args.ignore_files in f: - ## continue - ## tmp.append(f) - ## models = tmp - - print('# of models:', len(models)) - - c = 1 - t = 'fn,' + args.column_name + '\n' # ,aligned_seq, aligned_fn\n' - for m in models: - mrna = RNAmodel(m) - #print r1.fn, r2.fn, r1.get_rmsd_to(r2)#, 'tmp.pdb') - # print(m) - rmsd = target.get_rmsd_to(mrna, args.way, args.triple_mode, args.save, args.tseq) #, 'tmp.pdb') - #except: - if 0: - print(m) - sys.exit(1) - #print rmsd - t += mrna.fn + ',' + str(rmsd) + '\n' - #break - - print(t.strip()) - - if args.result: - with open(args.result, 'w') as f: - f.write(t) - - if args.sort: - import pandas as pd - df = pd.read_csv(args.result) - df = df[df.rmsd != -1] - df = df.sort_values('rmsd') - df.to_csv(args.result, index=False) - print('saved: %s' % args.result) - print(df.to_string(index=False)) diff --git a/rna_tools/tools/triplexibility/triplexibility2.py b/rna_tools/tools/triplexibility/triplexibility2.py deleted file mode 100755 index ad13e16da..000000000 --- a/rna_tools/tools/triplexibility/triplexibility2.py +++ /dev/null @@ -1,354 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- - -""" -v2 is full atom! - -Examples:: - - triplexibility.py -t 2nd_triplex_FB_ABC.pdb triples-all-v2-rpr/*.pdb --save --result abc.csv - -""" -from __future__ import print_function - -import Bio.PDB.PDBParser -import Bio.PDB.Superimposer -import copy -import warnings -warnings.filterwarnings('ignore', '.*Invalid or missing.*',) -warnings.filterwarnings('ignore', '.*with given element *',) -warnings.filterwarnings('ignore', '.*is discontinuous*',) -warnings.filterwarnings('ignore', '.*Ignoring unrecognized record*',) - -import sys -from icecream import ic -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -from rna_tools.rna_tools_lib import set_chain_for_struc, RNAStructure -from rna_tools.rna_tools_config import RT - -import argparse -import sys -import glob -import re -import os - -class RNAmodel: - def __init__(self, fpath): - # parser 1-5 -> 1 2 3 4 5 - self.struc = Bio.PDB.PDBParser().get_structure('', fpath) - self.__get_atoms() - self.fpath = fpath - self.fn = os.path.basename(fpath) - # self.atoms = [] - # if save: - # self.save() # @save - - def __get_atoms(self): - self.atoms = [[], [], []] # this will be only 3 resides - # ugly but should work - tseq = '' - for index, res in enumerate(self.struc.get_residues()): - self.atoms[index] = [] - for at in res: - self.atoms[index].append(at) - tseq += res.get_resname() - ## # calc rmsd # - ## if not tseq: - ## tseq = '' - ## rt = None - ## for a in self.atoms_for_rmsd: - ## r = a.get_parent() - ## if r != rt: - ## rt = r - ## tseq += r.get_resname().strip() - self.tseq = tseq - return self.atoms - - def __str__(self): - return self.fn #+ ' # beads' + str(len(self.residues)) - - def __repr__(self): - return self.fn #+ ' # beads' + str(len(self.residues)) - - def get_report(self): - """Str a short report about rna model""" - t = ' '.join(['File: ', self.fn, ' # of atoms:', str(len(self.atoms)), '\n']) - for r,a in zip(self.residues, self.atoms ): - t += ' '.join(['resi: ', str(r) ,' atom: ', str(a) , '\n' ]) - return t - - def get_rmsd_to(self, other_rnamodel, way="", triple_mode=False, save=True, tseq=''): - """Calc rmsd P-atom based rmsd to other rna model - - sugar now 10 atoms ;-) """ - sup = Bio.PDB.Superimposer() - - other_atoms_for_rmsd = other_rnamodel.atoms - - if triple_mode: - def chunks(lst, n): - """Yield successive n-sized chunks from lst. - https://stackoverflow.com/questions/312443/how-do-you-split-a-list-into-evenly-sized-chunks - """ - for i in range(0, len(lst), n): - yield lst[i:i + n] - - rmsd_min = 10000 # ugly - import itertools - # ok, for different residues now it's a problem - per = list(itertools.permutations([0, 1, 2])) # [(0, 1, 2), (0, 2, 1), (1, 0, 2), (1, 2, 0), (2, 0, 1), (2, 1, 0)] - #lst = list(chunks(other_atoms_for_rmsd, - # int(len(other_atoms_for_rmsd)/3))) # for 1 atom, this will be 1 x 3 [3 residues] - # # so so len is 3 atoms so / by 3 to get how many atoms per residue - - self.atoms_for_rmsd = [] - for i in self.atoms: - self.atoms_for_rmsd.extend(i) - - sup_min = None - seq_min = 'not yet obtained, rmsd rejected!' - p_min = None - - rms = -1 - - for p in per: # for each combo make a list of atoms - - patoms = [] - for i in p: # p=(1, 2, 3) - #patoms.extend(lst[i]) - # list is not needed, just other_atoms !!!! it's a list of [1, 2, 3] residues - patoms.extend(other_atoms_for_rmsd[i]) - - #print(self.atoms_for_rmsd) - ## print('patoms') - ## for a in patoms: - ## print(a, a.get_parent().get_id()) - ## print('self.atoms_for_rmsd') - ## for a in self.atoms_for_rmsd: - ## print(a, a.get_parent().get_id()) - #sup.set_atoms(patoms, self.atoms_for_rmsd) - - rt = None - seq = '' - for a in patoms: - r = a.get_parent() - if r != rt: - rt = r - seq += r.get_resname().strip() - - ic(self.tseq.lower(), seq.lower(), other_rnamodel.fpath) - # dont' even calc rmsd if the curr seq and tseq are not the same - if self.tseq.lower() == seq.lower(): # only if seq is the same - - sup.set_atoms(self.atoms_for_rmsd, patoms) - rms = round(sup.rms, 2) - if rms < rmsd_min: - rmsd_min = rms - sup_min = copy.copy(sup) - suffix = seq - p_min = p - seq_min = seq - if args.debug: 'set new rmsd_min', rmsd_min - - if args.debug: - print(p, '', [i + 1 for i in p], end=' ') - print(seq, 'seq_min: ' + seq_min, rms) - - if p_min: # found target sequence - # what is this? ;-) - index = [0 ,0 ,0] - index[0] = p_min.index(0) - index[1] = p_min.index(1) - index[2] = p_min.index(2) - - # ugly re-set 123 to crazy id ! + 100, so this will - # fill up 1 2 3 for the second for - rs = other_rnamodel.struc[0].get_residues() - for i, r in enumerate(rs): - r.id = (' ', index[i] + 253, ' ') # ugly, some random offset - - for i, r in enumerate(other_rnamodel.struc[0].get_residues()): - r.id = (' ', index[i] + 1, ' ') - if args.debug: print('r', r) - - io = Bio.PDB.PDBIO() - sup_min.apply(other_rnamodel.struc.get_atoms()) - # if args.debug: print(p_min, [i + 1 for i in p_min]) - io.set_structure(other_rnamodel.struc) - - args.save_here = True - if args.save_here and save: - folder = os.path.basename(self.fpath.replace('.pdb', '_' + args.folder_prefix + '_aligned')) - # print(f) - try: - os.mkdir(folder) - except: - pass - fout = folder + os.sep + "{:1.2f}".format(rmsd_min) + '-' + os.path.basename(other_rnamodel.fpath)#.replace('.pdb', '-' + str(rms) + '.pdb')) - #_s' + suffix + '.pdb')) - else: - fout = other_rnamodel.fpath.replace('.pdb', '_aligned.pdb')#_s' + suffix + '.pdb') - - if args.debug: print(fout) - - if save: - io.save(fout) - # ugly set chain to A - set_chain_for_struc(fout, 'A', save_file_inplace=True) - # and now run this to sort into 1 2 3 - - r = RNAStructure(fout) - remarks = r.get_remarks_text() - r1 = r.get_res_text('A', 1) - r2 = r.get_res_text('A', 2) - r3 = r.get_res_text('A', 3) - with open(fout, 'w') as f: - f.write(remarks) - f.write(r1) - f.write(r2) - f.write(r3) - r.reload() - r.get_rnapuzzle_ready() - if rmsd_min < 1: # !!!!!!!!!!!! ugly - r.write() - return str(rmsd_min)# + ',s' + seq_min + ',' + os.path.basename(fout) - else: - # check if number of the same atoms # - # if not the same then return -1 # - # print(len(self.atoms_for_rmsd), len(other_atoms_for_rmsd)) - if len(self.atoms_for_rmsd) != len(other_atoms_for_rmsd): - return -1 - sup.set_atoms(self.atoms_for_rmsd, other_atoms_for_rmsd) - rms = round(sup.rms, 2) - - if save: - ## io = Bio.PDB.PDBIO() - ## sup.apply(self.struc.get_atoms()) - ## io.set_structure(self.struc) - ## io.save("aligned.pdb") - - io = Bio.PDB.PDBIO() - sup.apply(other_rnamodel.struc.get_atoms()) - io.set_structure(other_rnamodel.struc) - - args.save_here = True - if args.save_here and save: - f = os.path.basename(self.fpath.replace('.pdb', '_aligned')) - # print(f) - try: - os.mkdir(f) - except: - pass - # fout = f + os.sep + os.path.basename(other_rnamodel.fpath.replace('.pdb', '_aligned_s' + suffix + '.pdb')) - fout = f + os.sep + os.path.basename(other_rnamodel.fpath)#.replace('.pdb', '_aligned')) - else: - fout = other_rnamodel.fpath.replace('.pdb', '_aligned.pdb') - if save: - io.save(fout) - return rms - - -def get_rna_models_from_dir(directory): - models = [] - if not os.path.exists(directory): - raise Exception('Dir does not exist! ', directory) - files = glob.glob(directory + "/*.pdb") - files_sorted = sort_nicely(files) - for f in files_sorted: - #print f - models.append(RNAmodel(f)) - return models - -def sort_nicely( l ): - """ Sort the given list in the way that humans expect. - - http://blog.codinghorror.com/sorting-for-humans-natural-sort-order/ - """ - convert = lambda text: int(text) if text.isdigit() else text - alphanum_key = lambda key: [ convert(c) for c in re.split('([0-9]+)', key) ] - l.sort( key=alphanum_key ) - return l - - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - parser.add_argument('-t',"--target", - help="target file") - parser.add_argument('--result', #default='out.rmsd', - help="result file") - parser.add_argument('--ignore-files', default='aligned', help="use to ignore files, .e.g. with 'aligned'") - parser.add_argument('--suffix', default='aligned', help="used with --saved, by default: aligned") - parser.add_argument('--way', help="e.g., backbone+sugar, c1, c1+Nx") - parser.add_argument('--triple-mode', help="same crazy strategy to align triples", default=True, action="store_true") - parser.add_argument('--column-name', help="name column for rmsd, by default 'rmsd', but can also be a name of the target file", default="rmsd") - parser.add_argument("-s", "--save", action="store_true", help="set suffix with --suffix, by default: aligned") - parser.add_argument("--folder-prefix", default = '', help="folder name, t2-3-UAU_NAME_aligned") - - parser.add_argument("--debug", action="store_true") - parser.add_argument("--show", action="store_true", help="show the results in the terminal") - parser.add_argument("--sort", action="store_true", help='sort results based on rmsd (ascending), --result must be set up') - parser.add_argument("--tseq", help='target sequence, e.g. acu, find only triples of this sequence [use the order for the seq taken from the input PDB file, literally order of residues in a pdb file]') - parser.add_argument('--files', help='files', nargs='+', default=RT + '/rna_tools/tools/triplexibility/db/triples-all-v2-rpr/*.pdb') - return parser - -# main -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - if not args.debug: - ic.disable() - - target = RNAmodel(args.target) - - # a trick to get files be default if there is only a path (so a string ;-)) - if not isinstance(args.files, str): - models = args.files - else: - import glob - models = glob.glob(args.files) # opts.input_dir - - ## tmp = [] - ## if args.ignore_files: - ## for f in args.files: - ## if args.debug: print(f) - ## if args.ignore_files in f: - ## continue - ## tmp.append(f) - ## models = tmp - - print('# of models:', len(models)) - - c = 1 - t = 'fn,' + args.column_name + '\n' # ,aligned_seq, aligned_fn\n' - for m in models: - mrna = RNAmodel(m) - #print r1.fn, r2.fn, r1.get_rmsd_to(r2)#, 'tmp.pdb') - # print(m) - rmsd = target.get_rmsd_to(mrna, args.way, args.triple_mode, args.save, args.tseq) #, 'tmp.pdb') - #except: - if 0: - print(m) - sys.exit(1) - #print rmsd - t += mrna.fn + ',' + str(rmsd) + '\n' - #break - - if args.show: - print(t.strip()) # all the data - - if args.result: - with open(args.result, 'w') as f: - f.write(t) - - if args.sort: - import pandas as pd - df = pd.read_csv(args.result) - df = df[df.rmsd != -1] - df = df.sort_values('rmsd') - df.to_csv(args.result, index=False) - print('saved: %s' % args.result) - # print(df.to_string(index=False)) diff --git a/rna_tools/tools/triplexibility/trx-mutget-t1-1.py b/rna_tools/tools/triplexibility/trx-mutget-t1-1.py deleted file mode 100755 index 3bba66bba..000000000 --- a/rna_tools/tools/triplexibility/trx-mutget-t1-1.py +++ /dev/null @@ -1,41 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function - -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("--x4", help="", default="", action="store_true") - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("file", help="", default="") # nargs='+') - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - aa='x,g,g,c,g,g' # G21 - bb='x,c,g,g,a,u' # C61 - cc='u,c,a,g,u,u' # U80 - - csv = open(args.file).read().split('\n') - - for a, b in zip(aa.split(','), bb.split(',')): - if a != 'x': - for c in cc.split(','): - if args.x4: - seq = 'A:21' + a + ',C:61' + b + ',D:80' + c # search for the last column - else: - seq = '2:21' + a + ',6:61' + b + '+80' + c # search for the last column - cmd = "rna_pdb_toolsx.py --mutate '" + seq + "' " + args.file + " > " + "" + a + b + c + '-' + args.file + seq.replace(':', '-').replace(',', '-') + "-rpr.pdb" - print(seq) - print(cmd) - import os - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/trx-mutget-t1-2.py b/rna_tools/tools/triplexibility/trx-mutget-t1-2.py deleted file mode 100755 index 20a7036f9..000000000 --- a/rna_tools/tools/triplexibility/trx-mutget-t1-2.py +++ /dev/null @@ -1,37 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function - -import argparse - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("file", help="", default="") # nargs='+') - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - aa='x,c,c,a,c' - bb='x,g,u,u,c' - cc='g,u,a,c' - - csv = open(args.file).read().split('\n') - - for a, b in zip(aa.split(','), bb.split(',')): - if a != 'x': - for c in cc.split(','): - seq = 'A:22' + a + ',C:60' + b + ',B:52' + c # search for the last column - cmd = "rna_pdb_toolsx.py --mutate '" + seq + "' " + args.file + " > " + "" + a + b + c + '-' + args.file + seq.replace(':', '-').replace(',', '-') + "-rpr.pdb" - print(seq) - print(cmd) - import os - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/trx.py b/rna_tools/tools/triplexibility/trx.py deleted file mode 100755 index 218336d26..000000000 --- a/rna_tools/tools/triplexibility/trx.py +++ /dev/null @@ -1,221 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -import pandas as pd - -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr), includeContext=True) -ic.configureOutput(prefix='> ') - -import argparse -import glob -import random - -TRX_DB = "/Users/magnus/work/src/rna-tools/rna_tools/tools/triplexibility/trx-db/triple-db-ext-2+Clash200x2+Contacts-1_fix36UCG.csv" - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - #parser.add_argument('-', "--", help="", default="") - - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("-d", "--debug", - action="store_true", help="be verbose") - parser.add_argument("seq", help="")#, nargs='+') - parser.add_argument("--edge", help="e.g., cWW_cHS") - return parser - - -def growth_t13(s):#'uaa'): - df = pd.read_csv('/Users/magnus/Desktop/trx/mutget/t1-3/t1-3_full_Yusuf_SimCols.csv') - df = df.set_index('id') - s = s.lower() - # print(df) - p = s[:2] - t = s[2] - return df[p][t] - -def growth_t33(s):#'uaa'): - df = pd.read_csv('/Users/magnus/Desktop/trx/mutget/t3-3/fig_SimpCols.csv') - df = df.set_index('id') - s = s.lower() - # print(df) - p = s[:2] - t = s[2] - return df[p][t] - -def growth_t24(s): - df = pd.read_csv('/Users/magnus/Desktop/trx/mutget/t2-4/fig_SimpCols.csv') - df = df.set_index('id') - s = s.lower() - # print(df) - p = s[:2] - t = s[2] - return df[p][t] - -def growth_t23(s): - """Return -1 for Nan otherwise return value""" - df = pd.read_csv('/Users/magnus/Desktop/trx/mutget/t2-3/t2-3_SimpCols.csv') - df = df.set_index('id') - s = s.lower() - # print(df) - p = s[:2] - t = s[2] - if pd.isna(df[p][t]): - return -1 - else: - return df[p][t] - -def hr(t): - l = len(t) - half = int(l/2) - print('-' * (40 - half) + ' ' + t + ' ' + '-' * (40 - half)) - -def fopen(filename, verbose=0): - import subprocess - cmd = 'mdfind -name "' + filename + '"' - if verbose: - print(cmd) - out = subprocess.Popen(cmd, stdout=subprocess.PIPE, shell=True).stdout.read().decode() - first_hit = out.split('\n')[0] - return open(first_hit) - -def wscore(seq, edge, type='instances', binary=False): - """ - x is - - triple instances clashes near exists contacts_bo contacts_no_bk contacts_rpr clashscore_rpr clashscore_no_bk clashscore_bo Unnamed: 11 Unnamed: 12 Unnamed: 13 - 1557 cWW_cHS_UCU 1.0 0.0 0.0 1.0 2.0 2.0 3.0 0.0 0.0 0.0 NaN NaN NaN - ('cWW_cHS_GCU:', 4) ('cWW_cHS_UCU:', 2) - - ValueError - - triple instances clashes near exists contacts_bo contacts_no_bk contacts_rpr clashscore_rpr clashscore_no_bk clashscore_bo Unnamed: 11 Unnamed: 12 Unnamed: 13 -5202 cWW_cHS_CGU 0.0 0.0 0.0 0.0 NaN NaN NaN NaN NaN NaN NaN NaN NaN -Traceback (most recent call last): - File "splix_trx2.py", line 76, in - score2 = score_triple(triple2nd, edge) - File "splix_trx2.py", line 53, in score_triple - score = triple + ':', round(int(x['contacts_bo'])) - File "/Users/magnus/miniconda2/envs/py37/lib/python3.7/site-packages/pandas/core/series.py", line 128, in wrapper - return converter(self.iloc[0]) - """ - import pandas as pd - df = pd.read_csv('/Users/magnus/work/src/rna-tools/rna_tools/tools/triplexibility/triple-db.csv') - triple = edge + '_' + seq.upper() - ic(triple) - x = df[df['triple'] == triple] - # ic(seq, x) - #r3 = fopen('Triple_' + edge + '_' + seq + '_rpr.pdb.3dcnn.csv').read() - #score = triple + ':', round(int(x[contacts_bo'instances']) / 18, 2) - try: - score = str(round(int(x[type]))) # triple + ':' + # contacts_bo - except ValueError: - score = -1 # triple + ':-1' - #r3.split(',')[1].strip() - score = int(score) - # print(score) - if binary: - if score > 0: - return 1 - else: - return 0 - else: - return score - -def wall_score(seq, binary=False): - """ - """ - import pandas as pd - df = pd.read_csv("/Users/magnus/work/src/rna-tools/rna_tools/tools/triplexibility/trx-db/triple-db-ext-2+Clash200x2+Contacts-1_fix36UCG.csv") - seq = seq.upper() - print(seq) - x = df[df['seq'] == seq] - #print(df) - #ic(x) - #r3 = fopen('Triple_' + edge + '_' + seq + '_rpr.pdb.3dcnn.csv').read() - #score = triple + ':', round(int(x[contacts_bo'instances']) / 18, 2) - return x - -def score_triple2(seq, edge, rand=False): - """ - """ - x = df[df['seq'] == seq] - #r3 = fopen('Triple_' + edge + '_' + seq + '_rpr.pdb.3dcnn.csv').read() - #score = triple + ':', round(int(x[contacts_bo'instances']) / 18, 2) - try: - score = str(round(int(x[edge + '_contacts_bo']))) # triple + ':' + - except: - # print(x) - score = -1 # triple + ':-1' - #r3.split(',')[1].strip() - score = int(score) - binary = True - if rand: - return random.choice([0, 1]) - if binary: - if score >= 0: - return 1 - else: - return 0 - -def get_growth(seq, dfg, a): - """This is ugly, dfg global used""" - x = dfg[dfg['seq'] == seq] - try: - g = int(x['growth' + a.upper()]) # , int(x['growthA27']) - except: - print(seq) - binary = True - if binary: - if g > 0: - return 1 - else: - return 0 - -def init(): - import pandas as pd - df = pd.read_csv("/Users/magnus/Desktop/trx/db/triple-db.csv") - return df - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - edge = args.edge - seq = args.seq - v = args.verbose - - # if v: print(seq) - # dfg = pd.read_csv("/Users/magnus/Desktop/trx/db/triple-db.csv") - - #edge1st = 'cWW_cHS' - #triple1st = edge1st + '_' + 'GC' + seq[-1] - #triple2nd = edge + '_' + seq - - #triple1st = seq - # first - #if v: print(triple1st) - score = wscore(args.seq, args.edge)#, df) - print(score) - aaa - # second - #if v: print(triple2nd) - #score2 = score_triple(triple2nd, edge) - #print(score, score2, get_growth(seq)) - - x = growth_t23('GGG') # Nan - x = growth_t23('AGU') # Nan - ic(type(x)) - if x == 'nan': - ic(x) - import numpy as np - if x == np.nan: - print(x) - ic(np.nan) - - wall_score('UAU') diff --git a/rna_tools/tools/triplexibility/trx_mutagen.py b/rna_tools/tools/triplexibility/trx_mutagen.py deleted file mode 100755 index eb15bee40..000000000 --- a/rna_tools/tools/triplexibility/trx_mutagen.py +++ /dev/null @@ -1,47 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -import pandas as pd -import argparse -import os - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - #parser.add_argument('-', "--", help="", default="") - - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("ref", help="", default="") - parser.add_argument("--fig", help="", default="fig.py") - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - exec(open(args.fig).read()) - - for a, b in zip(aa.split(','), bb.split(',')): - if a != 'x': - for c in cc.split(','): - seqm = a + b + c - #seq = 'A:1' + a + '+2' + b + '+3' + c # search for the last column - seq = 'A:1' + a + '+2' + b + '+3' + c # search for the last column - f2 = args.ref + "_" + a + b + c + ".pdb" - cmd = "rna_pdb_toolsx.py --mutate '" + seq + "' " + args.ref + " > " + f2 - print(seq) - print(cmd) - os.system(cmd) - continue - - f3 = f2.replace('.pdb', '_rpr.pdb') - cmd = "rna_pdb_toolsx.py --rpr " + f2 + " > " + f3 - print(cmd) - os.system(cmd) - # --files ../../db/triples-all-v2-rpr/* - csvf = a + b + c + ".csv" - cmd = "triplexibility2.py -t " + f3 + " --save --sort --result " + csvf - print(cmd) - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/trx_mutagen_allvsall.py b/rna_tools/tools/triplexibility/trx_mutagen_allvsall.py deleted file mode 100755 index 925b25ca2..000000000 --- a/rna_tools/tools/triplexibility/trx_mutagen_allvsall.py +++ /dev/null @@ -1,46 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -import pandas as pd -import argparse -import os - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - #parser.add_argument('-', "--", help="", default="") - - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("ref", help="", default="") - parser.add_argument("--fig", help="", default="fig.py") - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - for a in ['a', 'c', 'g', 'U']: - for b in ['A', 'c', 'g', 'u']: - for c in ['a', 'c', 'g', 'U']: - os.makedirs('mutants', exist_ok=True) - os.makedirs('mutants_rpr', exist_ok=True) - - seqm = a + b + c - #seq = 'A:1' + a + '+2' + b + '+3' + c # search for the last column - seq = 'A:1' + a + '+2' + b + '+3' + c # search for the last column - f2 = args.ref + "_" + a + b + c + ".pdb" - cmd = "rna_pdb_toolsx.py --mutate '" + seq + "' " + args.ref + " > mutants/" + f2 - print(seq) - print(cmd) - os.system(cmd) - f3 = f2.replace('.pdb', '_rpr.pdb') - cmd = "rna_pdb_toolsx.py --rpr mutants/" + f2 + " > mutants_rpr/" + f3 - print(cmd) - os.system(cmd) - # --files ../../db/triples-all-v2-rpr/* - csvf = a + b + c + ".csv" - cmd = "triplexibility2.py -t mutants_rpr/" + f3 + " --save --sort --result " + csvf - print(cmd) - os.system(cmd) diff --git a/rna_tools/tools/triplexibility/trx_score.py b/rna_tools/tools/triplexibility/trx_score.py deleted file mode 100755 index 3f35ab4b5..000000000 --- a/rna_tools/tools/triplexibility/trx_score.py +++ /dev/null @@ -1,138 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -import pandas as pd -import argparse -import os - -from rna_tools.tools.triplexibility import trx -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("--fig", help="", default="fig.py") # nargs='+') - parser.add_argument("ref", help="", default="") # nargs='+') - parser.add_argument("-e", "--edge", help="", default= "Triple_cWW_cHS") # nargs='+') - parser.add_argument("-t", "--threshold", help="if t not none then if score > t is 1 else 0", type=int) # nargs='+') - return parser - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - exec(open(args.fig).read()) - - sl = [] - sle = [] - sledge = [] - stdb = [] - stdb2 = [] - stdb3 = [] - - for a, b in zip(aa.split(','), bb.split(',')): - if a != 'x': - scores = [] - scores_exem = [] - scores_edge = [] - scores_westhof2 = [] - scores_westhof3 = [] - scores_westhof = [] - - for c in cc.split(','): - - f2 = args.ref + "_" + a + b + c + ".pdb" - f3 = f2.replace('.pdb', '_rpr.pdb') - - csvf = a + b + c + ".csv" - seqm = a + b + c - - df = pd.read_csv(csvf, sep=',', index_col=False)#, index=False) - score = float(df['rmsd'][0]) - ic(score, args.threshold) - if args.threshold: - if score > args.threshold: - score = 1 - ic(1) - else: - score = 0 - ic(score) - scores.append(score) - - dfexemplar = df[df.fn.str.contains("exemplar")] - ic(dfexemplar) - score_exem = float(dfexemplar['rmsd'].head(1)) - if args.threshold: - if score_exem > args.threshold: - score_exem = 1 - else: - score_exem = 0 - ic(score_exem) - #except: - # score_exem = 10 # there is not even any exemplar - scores_exem.append(score_exem) - - dfedge = df[df.fn.str.contains(args.edge)] - ic(dfedge) - try: - score_edge = float(dfedge['rmsd'].head(1)) - except TypeError: # - score_edge = 10 - - if args.threshold: - if score_edge > args.threshold: - score_edge = 1 - else: - score_edge = 0 - ic(score_edge) - scores_edge.append(score_edge) - - scores = [] - score_westhof = trx.wscore(seqm, 'cWW_cHS', type='exists')#clashes') - scores_westhof.append(score_westhof) - score_westhof2 = trx.wscore(seqm, 'cWW_cHS', type='instances') - scores_westhof2.append(score_westhof2) - score_westhof3 = trx.wscore(seqm, 'cWW_cHS', type='contacts_bo')#clashes') - scores_westhof3.append(score_westhof3) - - #score_westhof = trx.wscore(seqm, 'cWW_cHS') - #sscores_westhof.append(score_westhof) - - sl.append(scores) - sle.append(scores_exem) - sledge.append(scores_edge) - - stdb.append(scores_westhof) - stdb2.append(scores_westhof2) - stdb3.append(scores_westhof3) - n = sl - - df = pd.DataFrame(sl) - df = df.T - df.to_csv('sl.csv', index=False) - - df = pd.DataFrame(sle) - df = df.T - df.to_csv('slexemplary.csv', index=False) - - df = pd.DataFrame(sledge) - df = df.T - df.to_csv('sledge.csv', index=False) - - df = pd.DataFrame(stdb) - df = df.T - df.to_csv('stdb.csv', index=False) - - df = pd.DataFrame(stdb2) - df = df.T - df.to_csv('stdb2.csv', index=False) - - df = pd.DataFrame(stdb3) - df = df.T - df.to_csv('stdb3.csv', index=False) - - ic(sle, stdb, stdb2, stdb3) diff --git a/rna_tools/tools/triplexibility/trx_score_allvsall.py b/rna_tools/tools/triplexibility/trx_score_allvsall.py deleted file mode 100755 index 606f3ccf1..000000000 --- a/rna_tools/tools/triplexibility/trx_score_allvsall.py +++ /dev/null @@ -1,105 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - sl = [] - sle = [] only for exemplar - sledge = [] only given Triple_cWW_cHS -""" - -import pandas as pd -import argparse -import os - -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("--fig", help="", default="fig.py") # nargs='+') - parser.add_argument("ref", help="", default="") # nargs='+') - parser.add_argument("-e", "--edge", help="", default= "Triple_cWW_cHS") # nargs='+') - parser.add_argument("-t", "--threshold", help="if t not none then if score > t is 1 else 0", type=int) # nargs='+') - - return parser - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - sl = [] - sle = [] - sledge = [] - for a in ['a', 'c', 'g', 'U']: - for b in ['A', 'c', 'g', 'u']: - - scores = [] - scores_exem = [] - scores_edge = [] - - for c in ['a', 'c', 'g', 'U']: - - csvf = a + b + c + ".csv" - seqm = a + b + c - - df = pd.read_csv(csvf, sep=',', index_col=False)#, index=False) - score = float(df['rmsd'][0]) - ic(score, args.threshold) - if args.threshold: - if score > args.threshold: - score = 1 - ic(1) - else: - score = 0 - ic(score) - scores.append(score) - - dfexemplar = df[df.fn.str.contains("exemplar")] - ic(dfexemplar) - score_exem = float(dfexemplar['rmsd'].head(1)) - if args.threshold: - if score_exem > args.threshold: - score_exem = 1 - else: - score_exem = 0 - ic(score_exem) - #except: - # score_exem = 10 # there is not even any exemplar - scores_exem.append(score_exem) - - dfedge = df[df.fn.str.contains(args.edge)] - ic(dfedge) - try: - score_edge = float(dfedge['rmsd'].head(1)) - except TypeError: # - score_edge = 10 - - if args.threshold: - if score_edge > args.threshold: - score_edge = 1 - else: - score_edge = 0 - ic(score_edge) - scores_edge.append(score_edge) - # # of cases - - sl.append(scores) - sle.append(scores_exem) - sledge.append(scores_edge) - n = sl - - df = pd.DataFrame(sl) - df = df.T - df.to_csv('sl.csv', index=False) - - df = pd.DataFrame(sle) - df = df.T - df.to_csv('slexemplary.csv', index=False) - - df = pd.DataFrame(sledge) - df = df.T - df.to_csv('sledge.csv', index=False) diff --git a/rna_tools/tools/triplexibility/trx_score_growth.py b/rna_tools/tools/triplexibility/trx_score_growth.py deleted file mode 100755 index 2bdf9f3dc..000000000 --- a/rna_tools/tools/triplexibility/trx_score_growth.py +++ /dev/null @@ -1,52 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" - -""" -from __future__ import print_function -import argparse -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - - #parser.add_argument('-', "--", help="", default="") - - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - # parser.add_argument("file", help="", default="") # nargs='+') - return parser - - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - dat = """aua,0 - auc,0 - auG,0 - aua,0.8 - Cca,0 - CGa,0 - CcG,0 - Ccu,0 - CGa,0 - CGc,0 - CGG,1 - CGu,1 - Cua,0 - Cuc,0 - Cug,0 - Cuu,0.5""" - - for l in dat.split('\n'): - s, g = l.split(',') - s = s.strip() - # load data - d = open('/Users/magnus/Desktop/trx-farfar/t1-2/' + s + '/' + s + '_short.csv').read() # _full - print(s + ',' + g + ',' + d.replace('source,target,n\n', '').replace('\n', ',')[:-1]) # to remove last coma diff --git a/rna_tools/tools/triplexibility/trx_score_onCol.py b/rna_tools/tools/triplexibility/trx_score_onCol.py deleted file mode 100755 index e8a7e663f..000000000 --- a/rna_tools/tools/triplexibility/trx_score_onCol.py +++ /dev/null @@ -1,126 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" -trx_score_onCol.py t3-3_rpr_fx.pdb --growth ~/Desktop/trx/mutget/t1-3/t1-3_full2.csv -""" - -import pandas as pd -import argparse -import os - -from rna_tools.tools.triplexibility import trx -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - parser.add_argument("--fig", help="", default="fig.py") # nargs='+') - parser.add_argument("ref", help="", default="") # nargs='+') - parser.add_argument("--growth", help="", default="") # nargs='+') - parser.add_argument("-e", "--edge", help="", default= "Triple_cWW_cHS") # nargs='+') - parser.add_argument("-t", "--threshold", help="if t not none then if score > t is 1 else 0", type=int) # nargs='+') - return parser - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - exec(open(args.fig).read()) - - rows = [] # seq, scores - for a, b in zip(aa.split(','), bb.split(',')): - if a != 'x': - for c in cc.split(','): - - row = [] - cols = [] - - cols.append('seq') - cols.append('seql') - - f2 = args.ref + "_" + a + b + c + ".pdb" - f3 = f2.replace('.pdb', '_rpr.pdb') - - csvf = a + b + c + ".csv" - seqm = a + b + c - row.append(seqm) - row.append(seqm.lower()) - - df = pd.read_csv(csvf, sep=',', index_col=False)#, index=False) - score = float(df['rmsd'][0]) - ic(score, args.threshold) - if args.threshold: - if score > args.threshold: - score = 1 - ic(1) - else: - score = 0 - ic(score) - cols.append('rmsd') - row.append(score) - - dfexemplar = df[df.fn.str.contains("exemplar")] - ic(dfexemplar) - score_exem = float(dfexemplar['rmsd'].head(1)) - if args.threshold: - if score_exem > args.threshold: - score_exem = 1 - else: - score_exem = 0 - ic(score_exem) - #except: - # score_exem = 10 # there is not even any exemplar - row.append(score_exem) - cols.append('rmsd_exemplary') - - dfedge = df[df.fn.str.contains(args.edge)] - ic(dfedge) - try: - score_edge = float(dfedge['rmsd'].head(1)) - except TypeError: # - score_edge = 10 - - if args.threshold: - if score_edge > args.threshold: - score_edge = 1 - else: - score_edge = 0 - ic(score_edge) - row.append(score_edge) - cols.append('rmsd_edge') - - scores = [] - score_westhof = trx.wscore(seqm, 'cWW_cHS', type='exists')#clashes') - row.append(score_westhof) - cols.append('exists') - - score_westhof2 = trx.wscore(seqm, 'cWW_cHS', type='instances') - row.append(score_westhof2) - cols.append('instances') - - score_westhof3 = trx.wscore(seqm, 'cWW_cHS', type='contacts_bo')#clashes') - row.append(score_westhof3) - cols.append('contacts') - - #score_westhof = trx.wscore(seqm, 'cWW_cHS') - #sscores_westhof.append(score_westhof) - - if args.growth: - cols.append('growthby') - df = pd.read_csv(args.growth, sep=',', index_col=False) - growth = df[df['seql'] == seqm.lower()]['growthby'].values[0] - row.append(growth) - - rows.append(row) - - print(cols) - print(rows) - - df = pd.DataFrame(rows, columns=cols) - print(df) - df.to_csv('_scores_.csv', index=False) diff --git a/rna_tools/tools/triplexibility/trx_score_onCol_allvsall.py b/rna_tools/tools/triplexibility/trx_score_onCol_allvsall.py deleted file mode 100755 index 467426167..000000000 --- a/rna_tools/tools/triplexibility/trx_score_onCol_allvsall.py +++ /dev/null @@ -1,126 +0,0 @@ -#!/usr/bin/env python -# -*- coding: utf-8 -*- -""" -trx_score_onCol.py t3-3_rpr_fx.pdb --growth ~/Desktop/trx/mutget/t1-3/t1-3_full2.csv -""" - -import pandas as pd -import argparse -import os - -from rna_tools.tools.triplexibility import trx -from icecream import ic -import sys -ic.configureOutput(outputFunction=lambda *a: print(*a, file=sys.stderr)) -ic.configureOutput(prefix='> ') - -def get_parser(): - parser = argparse.ArgumentParser( - description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) - parser.add_argument("-v", "--verbose", - action="store_true", help="be verbose") - #parser.add_argument("--fig", help="", default="fig.py") # nargs='+') - parser.add_argument("--growth", help="", default="") # nargs='+') - parser.add_argument("-e", "--edge", help="", default= "Triple_cWW_cHS") # nargs='+') - parser.add_argument("-t", "--threshold", help="if t not none then if score > t is 1 else 0", type=int) # nargs='+') - parser.add_argument("ref", help="", default="") # nargs='+') - return parser - -if __name__ == '__main__': - parser = get_parser() - args = parser.parse_args() - - print(args) - - rows = [] # seq, scores - for a in ['a', 'c', 'g', 'u']: - for b in ['a', 'c', 'g', 'u']: - for c in ['a', 'c', 'g', 'u']: - - row = [] - cols = [] - - cols.append('seq') - cols.append('seql') - - f2 = args.ref + "_" + a + b + c + ".pdb" - f3 = f2.replace('.pdb', '_rpr.pdb') - - csvf = a + b + c + ".csv" - seqm = a + b + c - row.append(seqm) - row.append(seqm.lower()) - - df = pd.read_csv(csvf, sep=',', index_col=False)#, index=False) - score = float(df['rmsd'][0]) - ic(score, args.threshold) - if args.threshold: - if score > args.threshold: - score = 1 - ic(1) - else: - score = 0 - ic(score) - cols.append('rmsd') - row.append(score) - - dfexemplar = df[df.fn.str.contains("exemplar")] - ic(dfexemplar) - score_exem = float(dfexemplar['rmsd'].head(1)) - if args.threshold: - if score_exem > args.threshold: - score_exem = 1 - else: - score_exem = 0 - ic(score_exem) - #except: - # score_exem = 10 # there is not even any exemplar - row.append(score_exem) - cols.append('rmsd_exemplary') - - dfedge = df[df.fn.str.contains(args.edge)] - ic(dfedge) - try: - score_edge = float(dfedge['rmsd'].head(1)) - except TypeError: # - score_edge = 10 - - if args.threshold: - if score_edge > args.threshold: - score_edge = 1 - else: - score_edge = 0 - ic(score_edge) - row.append(score_edge) - cols.append('rmsd_edge') - - scores = [] - score_westhof = trx.wscore(seqm, 'cWW_cHS', type='exists')#clashes') - row.append(score_westhof) - cols.append('exists') - - score_westhof2 = trx.wscore(seqm, 'cWW_cHS', type='instances') - row.append(score_westhof2) - cols.append('instances') - - score_westhof3 = trx.wscore(seqm, 'cWW_cHS', type='contacts_bo')#clashes') - row.append(score_westhof3) - cols.append('contacts') - - #score_westhof = trx.wscore(seqm, 'cWW_cHS') - #sscores_westhof.append(score_westhof) - - if args.growth: - cols.append('growthby') - df = pd.read_csv(args.growth, sep=',', index_col=False) - growth = df[df['seql'] == seqm.lower()]['growthby'].values[0] - row.append(growth) - - rows.append(row) - - print(cols) - print(rows) - - df = pd.DataFrame(rows, columns=cols) - print(df) - df.to_csv('_scores_.csv', index=False) diff --git a/setup.py b/setup.py index 6f13e32cf..1186ab343 100644 --- a/setup.py +++ b/setup.py @@ -138,15 +138,6 @@ 'rna_tools/tools/md/rna_traj_range.py', 'rna_tools/tools/md/rna_traj_nohetm.py', - 'rna_tools/tools/triplexibility/triplexibility.py', - 'rna_tools/tools/triplexibility/triplexibility2.py', - - 'rna_tools/tools/triplexibility/trx_mutagen_allvsall.py', - 'rna_tools/tools/triplexibility/trx_mutgen.py', - 'rna_tools/tools/triplexibility/trx_score_allvsall.py', - 'rna_tools/tools/triplexibility/trx_score.py', - 'rna_tools/tools/triplexibility/trx_score_onCol.py', - 'rna_tools/tools/df/rna_df_csv_sort.py', 'rna_tools/tools/df/rna_df_merge.py', 'rna_tools/tools/df/rna_df_merge_on.py',