NAMESPACE

# Generated by roxygen2: do not edit by hand

export(MutHist)
export(mut_summary)
export(mut_type)
export(type)
importFrom(ggplot2,"ggplot")
importFrom(ggplot2,"aes")
importFrom(ggplot2,"geom_bar")
importFrom(ggplot2,"coord_flip")
importFrom(ggplot2,"geom_text")
importFrom(ggplot2,"ylim")
importFrom(ggplot2,"xlab")
importFrom(ggplot2,"ylab")
importFrom(GenomicRanges,"GRanges")
importFrom(GenomeInfoDb,"seqinfo")
importFrom(Biostrings,"getSeq")
importFrom(Biostrings,"reverseComplement")
importFrom(dplyr,"count")
importFrom(dplyr,"%>%")
importFrom(grDevices, "colorRampPalette")
importFrom(RColorBrewer,"brewer.pal")
importFrom(BSgenome.Hsapiens.UCSC.hg38,"BSgenome.Hsapiens.UCSC.hg38")
importFrom(VariantAnnotation,"readVcf")
importFrom(VariantAnnotation,"alt")
importFrom(VariantAnnotation,"ref")
importFrom(stats,"start")
importFrom(stats,"end")
importFrom(GenomeInfoDb,"seqnames")
importFrom(MatrixGenerics,"rowRanges")