df_cleaning.ipynb

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 "cells": [
  {
   "cell_type": "code",
   "execution_count": 2,
   "id": "17954428",
   "metadata": {},
   "outputs": [],
   "source": [
    "# Importa librerias necesarias para el análisis\n",
    "\n",
    "import pandas as pd\n",
    "import numpy as np\n",
    "import plotly.express as px"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "id": "9f491ed4",
   "metadata": {},
   "outputs": [],
   "source": [
    "# Importa base de datos obtenida mediante conexión FTPS \n",
    "\n",
    "data = pd.read_csv(\"data/20210830_Región de Aysén del General Carlos Ibáñez del Campo_notificaciones_0600.csv\", \n",
    "                   sep=\"~\", # CSV con separador de semicolon\n",
    "                   low_memory=False\n",
    "                  )"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "id": "6bd94b04",
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>id_formulario_eno</th>\n",
       "      <th>numero_folio</th>\n",
       "      <th>id_enfermedad_eno</th>\n",
       "      <th>enfermedad_notificada</th>\n",
       "      <th>semana_epidemiologica</th>\n",
       "      <th>fecha_notificacion</th>\n",
       "      <th>etapa_clinica</th>\n",
       "      <th>establecimiento_salud</th>\n",
       "      <th>region</th>\n",
       "      <th>seremi</th>\n",
       "      <th>...</th>\n",
       "      <th>fecha_resultado_otro_cultivo_3</th>\n",
       "      <th>factor_riesgo_caso_confirmado</th>\n",
       "      <th>factor_riesgo_caso_sospechoso</th>\n",
       "      <th>factor_riesgo_viaje_internacional</th>\n",
       "      <th>factor_riesgo_viaje_nacional</th>\n",
       "      <th>ningun_factor_riesgo</th>\n",
       "      <th>test_antigeno_sars_positivo</th>\n",
       "      <th>tac_torax_covid</th>\n",
       "      <th>condicion</th>\n",
       "      <th>region_separacion</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>100166</td>\n",
       "      <td>50166</td>\n",
       "      <td>50</td>\n",
       "      <td>Coronavirus (COVID-19)</td>\n",
       "      <td>11</td>\n",
       "      <td>2020-03-12</td>\n",
       "      <td>DESCARTADA</td>\n",
       "      <td>Hospital Regional (Coihaique)</td>\n",
       "      <td>Región de Aysén del General Carlos Ibáñez del ...</td>\n",
       "      <td>SEREMI De Aisén del General Carlos Ibañez del ...</td>\n",
       "      <td>...</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>NaN</td>\n",
       "      <td>Región de Aysén del General Carlos Ibáñez del ...</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>1 rows × 275 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "   id_formulario_eno  numero_folio  id_enfermedad_eno   enfermedad_notificada  \\\n",
       "0             100166         50166                 50  Coronavirus (COVID-19)   \n",
       "\n",
       "   semana_epidemiologica fecha_notificacion etapa_clinica  \\\n",
       "0                     11         2020-03-12    DESCARTADA   \n",
       "\n",
       "           establecimiento_salud  \\\n",
       "0  Hospital Regional (Coihaique)   \n",
       "\n",
       "                                              region  \\\n",
       "0  Región de Aysén del General Carlos Ibáñez del ...   \n",
       "\n",
       "                                              seremi  ...  \\\n",
       "0  SEREMI De Aisén del General Carlos Ibañez del ...  ...   \n",
       "\n",
       "  fecha_resultado_otro_cultivo_3 factor_riesgo_caso_confirmado  \\\n",
       "0                            NaN                           NaN   \n",
       "\n",
       "   factor_riesgo_caso_sospechoso factor_riesgo_viaje_internacional  \\\n",
       "0                            NaN                               NaN   \n",
       "\n",
       "  factor_riesgo_viaje_nacional ningun_factor_riesgo  \\\n",
       "0                          NaN                  NaN   \n",
       "\n",
       "  test_antigeno_sars_positivo tac_torax_covid condicion  \\\n",
       "0                         NaN             NaN       NaN   \n",
       "\n",
       "                                   region_separacion  \n",
       "0  Región de Aysén del General Carlos Ibáñez del ...  \n",
       "\n",
       "[1 rows x 275 columns]"
      ]
     },
     "execution_count": 6,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "# Filtra datos obtenidos solo para pacientes con residencia en la Región de Aysén\n",
    "\n",
    "data_aysen = data[data['region_residencia'] == 'Región de Aysén del General Carlos Ibáñez del Campo']\n",
    "\n",
    "data_aysen.head(1)"
   ]
  }
 ],
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