DESCRIPTION

Package: iSEEtree
Version: 1.1.0
Authors@R: 
    c(person(given = "Giulio", family = "Benedetti", role = c("aut", "cre"),
           email = "giulio.benedetti@utu.fi",
           comment = c(ORCID = "0000-0002-8732-7692")),
      person(given = "Ely", family = "Seraidarian", role = c("ctb"),
             email = "ely.seraidarian@utu.fi",
             comment = c(ORCID = "0009-0008-8602-093X")),
      person(given = "Leo", family = "Lahti", role = c("aut"),
             email = "leo.lahti@iki.fi",
             comment = c(ORCID = "0000-0001-5537-637X")))
Title: Interactive visualisation for microbiome data
Description:
    iSEEtree is an extension of iSEE for the TreeSummarizedExperiment.
    It leverages the functionality from the miaViz package for microbiome data
    visualisation to create panels that are specific for
    TreeSummarizedExperiment objects. Not surprisingly, it also depends on the
    generic panels from iSEE.
biocViews: Microbiome, Software, Visualization, GUI, ShinyApps, DataImport
License: Artistic-2.0
Encoding: UTF-8
Depends:
    R (>= 4.4.0),
    iSEE
Imports:
    grDevices,
    methods,
    miaViz,
    S4Vectors,
    shiny,
    mia,
    shinyWidgets,
    SingleCellExperiment,
    SummarizedExperiment,
    TreeSummarizedExperiment,
    utils
Suggests:
    biomformat,
    BiocStyle,
    knitr,
    MGnifyR,
    RefManageR,
    remotes,
    rmarkdown,
    scater,
    testthat (>= 3.0.0),
    vegan
URL: https://github.com/microbiome/iSEEtree
BugReports: https://github.com/microbiome/iSEEtree/issues
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3