diff --git a/recipes/clair3-illumina/build.sh b/recipes/clair3-illumina/build.sh index 91ce406b0b6f3..63c71150a4330 100755 --- a/recipes/clair3-illumina/build.sh +++ b/recipes/clair3-illumina/build.sh @@ -5,7 +5,3 @@ cp -rv preprocess/realign $PREFIX/bin/preprocess cd $PREFIX/bin/preprocess/realign $CXX -std=c++14 -O1 -shared -fPIC -o realigner ssw_cpp.cpp ssw.c realigner.cpp $CXX -std=c++11 -shared -fPIC -o debruijn_graph -O3 debruijn_graph.cpp -I $PREFIX/include -L $PREFIX/lib - - - - diff --git a/recipes/clair3-illumina/meta.yaml b/recipes/clair3-illumina/meta.yaml index 468c6582e9270..08b0896dac355 100644 --- a/recipes/clair3-illumina/meta.yaml +++ b/recipes/clair3-illumina/meta.yaml @@ -1,5 +1,5 @@ {% set name = "clair3-illumina" %} -{% set version = "1.0.6" %} +{% set version = "1.0.7" %} package: name: {{ name }} @@ -7,13 +7,14 @@ package: source: url: https://github.com/HKU-BAL/Clair3/archive/refs/tags/v{{ version }}.zip - sha256: 30821ae909e4d28d5ca01594873b7977690cc2e63f5777b5d6799ec86660e370 + sha256: 4c48146a1a9c0af547444719f443f8f536f5ce51b2f0c426107ef4288b31a4f2 build: number: 0 skip: True # [osx] run_exports: - - {{ pin_subpackage(name, max_pin="x.x") }} + - {{ pin_subpackage(name, max_pin="x") }} + requirements: build: - {{ compiler('cxx') }} @@ -21,6 +22,7 @@ requirements: - boost-cpp run: - clair3 + test: imports: - tensorflow @@ -31,5 +33,11 @@ test: about: home: 'https://github.com/HKU-BAL/Clair3' license: BSD-3-Clause + license_family: BSD license_file: LICENSE.md summary: "Clair3 with libraries to support variant calling using Illumina short-reads. Version in sync with Clair3." + dev_url: 'https://github.com/HKU-BAL/Clair3' + +extra: + identifiers: + - doi:10.1038/s43588-022-00387-x