From 13a41ebb1e1969ffce3583665c50bed76374bed7 Mon Sep 17 00:00:00 2001
From: Joshua Zhuang <71105179+mencian@users.noreply.github.com>
Date: Tue, 10 Dec 2024 06:20:23 -0600
Subject: [PATCH] Build poa on osx (#52699)

* Build poa on osx

* Update pscores.patch

* Update pscores.patch

* Update meta.yaml
---
 recipes/poa/build.sh  | 11 ++++++-----
 recipes/poa/meta.yaml | 23 +++++++++++++++++------
 2 files changed, 23 insertions(+), 11 deletions(-)

diff --git a/recipes/poa/build.sh b/recipes/poa/build.sh
index 741919e947e41..eccfbcf32d478 100644
--- a/recipes/poa/build.sh
+++ b/recipes/poa/build.sh
@@ -3,9 +3,10 @@
 mkdir -p $PREFIX/bin
 mkdir -p $PREFIX/lib
 
-make poa CC=$CC CXX=$CXX CFLAGS="$CFLAGS -fcommon -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I."
-
-cp poa $PREFIX/bin
-cp make_pscores.pl $PREFIX/bin
-cp liblpo.a $PREFIX/lib
+make poa CC="$CC" CXX="$CXX" \
+	CFLAGS="$CFLAGS -O3 -Wno-implicit-function-declaration -Wno-format -fcommon -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I." \
+	-j"${CPU_COUNT}"
 
+install -v -m 0755 poa $PREFIX/bin
+install -v -m 0755 make_pscores.pl $PREFIX/bin
+cp -rf liblpo.a $PREFIX/lib
diff --git a/recipes/poa/meta.yaml b/recipes/poa/meta.yaml
index 72c3fa033d626..d07f3731eb39e 100644
--- a/recipes/poa/meta.yaml
+++ b/recipes/poa/meta.yaml
@@ -1,14 +1,18 @@
+{% set name = "poa" %}
+{% set version = "2.0" %}
+
 package:
-  name: poa
-  version: "2.0"
+  name: {{ name }}
+  version: {{ version }}
 
 build:
-  number: 5
-  skip: True # [osx]
+  number: 6
+  run_exports:
+    - {{ pin_subpackage('poa', max_pin="x") }}
 
 source:
-  md5: 9e2eb270d4867114406f53dab1311b2b
   url: https://downloads.sourceforge.net/project/poamsa/poamsa/2.0/poaV2.tar.gz
+  sha256: d98d8251af558f442d909a6527694825ef6f79881b7636cad4925792559092c2
   patches:
     - pscores.patch
 
@@ -25,5 +29,12 @@ test:
 
 about:
   home: 'https://sourceforge.net/projects/poamsa'
-  license: GPLv2
+  license: "GPL-2.0-or-later"
+  license_family: GPL
   summary: "POA is Partial Order Alignment, a fast program for multiple sequence alignment in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment."
+  dev_url: 'https://sourceforge.net/projects/poamsa'
+
+extra:
+  additional-platforms:
+    - linux-aarch64
+    - osx-arm64