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viscy --help prints a useful and succinct help message.
viscy --help
But, viscy subcommand --help prints a lot of lightning CLI info that is not relevant, e.g.,
viscy subcommand --help
viscy preprocess --help prints:
viscy preprocess --help
--lr_scheduler CONFIG | CLASS_PATH_OR_NAME | .INIT_ARG_NAME VALUE One or more arguments specifying "class_path" and "init_args" for any subclass of {torch.optim.lr_schedu ler.LRScheduler,lightning.pytorch.cli.ReduceLROnPlatea u}. (type: Union[LRScheduler, ReduceLROnPlateau], known subclasses: torch.optim.lr_scheduler.LRScheduler, monai.optimizers.LinearLR, monai.optimizers.ExponentialLR, torch.optim.lr_scheduler.LambdaLR, monai.optimizers.WarmupCosineSchedule, torch.optim.lr_scheduler.MultiplicativeLR, torch.optim.lr_scheduler.StepLR, torch.optim.lr_scheduler.MultiStepLR, torch.optim.lr_scheduler.ConstantLR, torch.optim.lr_scheduler.LinearLR, torch.optim.lr_scheduler.ExponentialLR, torch.optim.lr_scheduler.SequentialLR, torch.optim.lr_scheduler.PolynomialLR, torch.optim.lr_scheduler.CosineAnnealingLR, torch.optim.lr_scheduler.ChainedScheduler, torch.optim.lr_scheduler.ReduceLROnPlateau, lightning.pytorch.cli.ReduceLROnPlateau, torch.optim.lr_scheduler.CyclicLR, torch.optim.lr_scheduler.CosineAnnealingWarmRestarts, torch.optim.lr_scheduler.OneCycleLR, torch.optim.swa_utils.SWALR, lightning.pytorch.cli.ReduceLROnPlateau) Compute dataset statistics before training or testing for normalization: --data_path DATA_PATH (required, type: <class 'Path'>) --channel_names CHANNEL_NAMES, --channel_names+ CHANNEL_NAMES (type: Union[list[str], Literal[-1]], default: -1) --num_workers NUM_WORKERS (type: int, default: 1) --block_size BLOCK_SIZE (type: int, default: 32)
@ziw-liu please fix this.
The text was updated successfully, but these errors were encountered:
ziw-liu
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viscy --help
prints a useful and succinct help message.But,
viscy subcommand --help
prints a lot of lightning CLI info that is not relevant, e.g.,viscy preprocess --help
prints:@ziw-liu please fix this.
The text was updated successfully, but these errors were encountered: