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better error message for `bad suffix` #372

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AlessioMilanese opened this issue Jun 21, 2020 · 0 comments

AlessioMilanese commented Jun 21, 2020

When running:

pplacer -c my.refpkg test.fasta2

I got the following error:

Uncaught exception: Failure("unfamiliar suffix on test.fasta2")
Running pplacer v1.1.alpha19-0-g807f6f3 analysis on test.fasta2...
Fatal error: exception Failure("unfamiliar suffix on test.fasta2")

I had to go into the code:
https://github.com/matsen/pplacer/blob/master/common_src/alignment.ml#L70

and see why I got this error. I would change to:
Unrecognized file extension. Supported file extensions: ".fasta", ".fa", ".sth", ".sto"

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