diff --git a/doc/source/tutorials/go_models.rst b/doc/source/tutorials/go_models.rst index 91d3939c..e4a78107 100644 --- a/doc/source/tutorials/go_models.rst +++ b/doc/source/tutorials/go_models.rst @@ -4,11 +4,11 @@ Gō models The MartiniGō model is a method of maintaining secondary and tertiary structure using native contacts of proteins to create a `Gō-like model `_ between beads. -In contrast to an elastic network, the Go model applies non-bonded interactions between pairs of +In contrast to an elastic network, the Gō model applies non-bonded interactions between pairs of beads within a protein based on residue overlap and restricted chemical structural unit criteria. The latest version of Martinize2 (version ≥ 0.10.0) implements the newest version of the -`Gō model `_. In this version of the Go model, interactions +`Gō model `_. In this version of the Gō model, interactions are mediated through the addition of extra virtual sites on top of backbone beads in the protein. Interactions are in the form of Lennard-Jones interactions, which are written as an extra file to be included in the protein topology.