From e993fb2787346345662c240967a3ec80bb2aac64 Mon Sep 17 00:00:00 2001 From: malonge Date: Sun, 31 Oct 2021 14:15:34 -0400 Subject: [PATCH] updated static test results --- tests/integration_tests/run_tests.sh | 16 +++++++--------- 1 file changed, 7 insertions(+), 9 deletions(-) diff --git a/tests/integration_tests/run_tests.sh b/tests/integration_tests/run_tests.sh index 364a078..5a1efe1 100644 --- a/tests/integration_tests/run_tests.sh +++ b/tests/integration_tests/run_tests.sh @@ -90,12 +90,11 @@ echo "" mecho "Validating results:" echo "" -# TODO replace with new results bash scripts/validate_results.sh ${OUTDIR}/ragtag.correct.agp \ - ~/Projects/ragtag_workspace/static_results/tomato/ragtag.correct.agp + ~/Projects/ragtag_workspace/static_results/ara/default/ragtag.correct.agp -bash scripts/validate_results.sh ragtag_output_tomato_default/ragtag.scaffold.agp \ - ~/Projects/ragtag_workspace/static_results/tomato/ragtag.scaffold.agp +bash scripts/validate_results.sh ${OUTDIR}/ragtag.scaffold.agp \ + ~/Projects/ragtag_workspace/static_results/ara/default/ragtag.scaffold.agp # Run RagTag @@ -159,12 +158,11 @@ echo "" mecho "Validating results:" echo "" -# TODO update results -bash scripts/validate_results.sh ragtag_output_Ara_nucmer/ragtag.correct.agp \ - ~/Projects/ragtag_workspace/static_results/ara/ragtag.correct.agp +bash scripts/validate_results.sh ${OUTDIR}/ragtag.correct.agp \ + ~/Projects/ragtag_workspace/static_results/ara/nucmer/ragtag.correct.agp -bash scripts/validate_results.sh ragtag_output_Ara_nucmer/ragtag.scaffold.agp \ - ~/Projects/ragtag_workspace/static_results/ara/ragtag.scaffold.agp +bash scripts/validate_results.sh ${OUTDIR}/ragtag.scaffold.agp \ + ~/Projects/ragtag_workspace/static_results/ara/nucmer/ragtag.scaffold.agp # Run RagTag